CmaCh11G009420 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G009420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc finger CCCH domain-containing protein ZFN-like
Location	Cma_Chr11: 4951691 .. 4958831 (+)
RNA-Seq Expression	CmaCh11G009420
Synteny	CmaCh11G009420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCACCACTGAAAAAGAAAAAGGCTAAAATGTTAGCAGGAATCTGTTGAACGTGGCGGAACCAAAGCGAGAGTTATTACCAAATCCTTTAATCGCGAGAGTCTTCTAATCTTCGTCGTTCGTTTTTCCTCTCCAATAATCGTCAGCAACAATGGAGGGATGGATGTTTTGGTTGGTTTCGTTACTCTTTTCTCTCTCTTTTTAGTTTTTTTGTGTGGAGAGAAGACAACGCCCTTTTCTCTCTTCCTCTCTCTCTCTCTCTAAAAAACCCACCTACAGAAAATCGTCGATCAATCCCATATACTAAATTTTTCGTTTCATTCCTCTGTTTTTCCCCCGATTTTGTTTTTTCTTTGGTGTTTGAGAAGGAAATTGGATTGTGGGTTTTTGATTTGATCGGAATTAGTGCTGTGGAAGTGGTGGATTGTGGTGGAAATGGGGATTTGGTTGGTGGGTTTTGATGGGATGAGTTCTTCGCCGGCGATGGGGCGATGATTTAACGACGATGCTCCTAAGCGATGGAATACGATTCTGGAATTCCGATGTCTGTGACGGAGGGACACTCCTCTGCTCTCACGCCGTCCTTGCGCGAAGGTTCTTTTGCTAATTTCGGTATCGTTTATTTGTTTCTTTTTCCCCTTTCTTCTCTTTCGCAGACCGCATTTCTTTTTAACTCCGTTTTTTGTTATTTGTTCTTGTGGGTTTTTGTGGTGTCTGTGTTTCACTGATCCATTTCGATGCACAAATGTTCTTTGTGATTGTTTGCTTGTTATATCCGATTTTTGGTTTCGATCTGTGCTGTATGATTTTGTTTTGCTACCTTTTTGTTCATGTTTGTTACTGGGTTTTTAGTTTCTAATGATATTGAGGAAGAGATCGAATTAAAATTTCTGAAAATTTCCGGTTCATATCTTTGTAGTCAATCTCCATTGAAGGCACTACAGTTGCTCTGATGATGGTGTAATCTGTTGGCTAAGTATTTTGTTACTTTTACTAAATTCCTGTGGAATAGAATGTGGCTGATCCATCTTATACCCATTTGTTACCTGTTTCTACTTTCTATGATGAAGTTTTTGGGTTCAAAGTTGGGTAGTTGAGTTGCTCCCTCGAAGTTATAAGGTTCGTTTATCCTAATGTGATTGAGAATCATAAGAAAGCAAATGAGTACGACATCATTGCCAATGCTCTCGATAGAGCCATCAACTTTGTAAATATTTTGATAGGAATCAACCCAAGGGAAAGTTTTGGAACGAATTACCTTTATAAACACAAGAATTTGCAAAGTAAAGGCTTAGTTCTCAACAAAACTAAACTCTCTATGATCATCAATACTGTAATTGTAACTTATAATTTAAGGACAATTCTCTAAAACTTTAAAAATACAATAAACCTTCTTAAATCTAAATCGTCCATGGCATGATTAAGACACCTTATTTCGTATCACATTTTAGATCTTTTCGCATGATAGTTTCTTCGAGTTATGACTTCCAACATTAGCCTTGACCACCTTGTTCTGAAGTGTTTAGGTTTGCCAACTAAAATCCTTGCAGAGTTGAGTCACCATATAATAGCATTATTACAAACACCAACTTATCGTAAGAAACAGAATCTCTGAATGGAATTTGAAAAAGGATGAGGAAGAATAAATTATGGCAATACCTCGAGTACGAAACTTGAGAATTTAGGACGTTACTTTTCTTATAGTGAACTCGCTCTTAATAACTATAGCTCTTTGAACACAGCTTGGGTGATACCTACCACTATGTCTTTAAATATAATTCCATTCTCTGTTATGTTGGAGCGGTACCATAATTGAACCACCGGAAAACTGTCTGATGAAGTCACATTCTCACTGTCACACTAACAACCCAATTAACAATCCTATCTTGCTGTAGAAGATGAATCTAGCCCTCTGTTTGCCTCATTCCGATTTTTCATGGCACGCCCACAAGGTTATCTAAATGAAAGAATTACCTTAATGCGACACCATTTGGGTTCATTTTACATTATGAAAGATTACCCTGATGTTGTTTGCCTCATTCCGGTTTTTCATGGCACGCCTACAAGCCCAAAAAATAAATACCTTGCCTGTGGACTTCTACATAATTGAACTCAGATGTGACAGCAGCCCATCAGGTTATGTCAATCTGCTTAGCAACAGTTGTTTTGGAAACATTTCCAACCATTAATATATCGTTCCTTAGAATATAGATAATGTCTACAAACTTGTGTTCATGGTCCACAGACACTAAAGGCAACTTCGTCCAATAAAGATTATTAGGGACACTCTATGCCTTTACTAAAGAAGTCGATCAGGTCTGACTAAAGAAGTCTATCAGGTAGGGGAAGTAGGAAAAAGGAGAGTTTTAAATTCAAAACTTTCAGGCATTAAGAAAAAAAAAGGTGTCTGGTGTATTAGTCTGTTTTACTATGTATTATTGCTTCACAAGGATACAATTGAGAACTCATCTTGCTATTCTATCTCGGGGCCTTGGTGTCTCATGCATTTGTTTGTCCGGCACCAAGGCATCTTTTTATGTTCTTCAATGCCACTTGGAATTGTTAAGTTTCTTCATTGCTTCTCCGAACCATATATTTGACCGTACCCAGCTATGCTTTTAGCTTTTGCATGCGTGCTTGTTAAAACGTGAGCATCATGGATTTAAAACAATATAGTTGTCAAGTTGTGAACGTTTATTTTTATTCTCTCTTTGCTTTTCTCATCTATTTTCTTCTTTATGATTGAAGATTTACTTATCTAATATCGTACAGATGCACTCTGGCAAATGAACTTGGGATCAGGTGAAATAATGGGATCTGGATCTTATCCCGTGCGACCTGGAGAGCCAGACTGTTCTTATTACATCAGAACTGGCCTCTGTAGATTTGGAGCTACATGTAGATTTAATCATCCACCTAATAGAGAGCTGGTACTAAGCAAAAATGTGATCCATTCAGTATTTGGTTGATTATATTCAAATATAAAATCATAATAAATATTTTTCAATTCCTTTCCCCTTTGGGAATAATTTCTTCTATCTGATTTGGGGCATGTACCTATGAGCAGCAGGTTAGAAACTAGGCAATATTATGCTGGCACAATCAATTAAATCTCTCCACAAAAAATTGGGTTCGTAACCATGGGGGCAAGCTTGTGCGATAGATAGATGTAAAGATATTATGTTATAGATCAGGTTCATATAGAGTTGTATTGTCATTTTTTGTTCCAAACGTGCTTACTGAACTAGTACTGAGCTCCTTAAATTTGATTGGGATAGAGAAAAGATAAGGGAATTATAAATGGTAAAATTGCATTTAACCTTAACTTAATAAACTAATTGTTCCTAACCTTATACTGTACATCCCTGAAGTCCAAGATGGGGAAATGTTTTATTTGCCGAACAGGTTTGCCCTTTTGAATACTATCCTTTTGTTTGTTTGATTATGTGCTGAACTAAGGGCATCAGAAATTTCTCCCTGAATAATGTGTTTGCTACATTTAATCTAGAAACATACAAAATACGTTTGCTCGTTATTTTGATTGCTATTTGAAGCTAACATGGAGTCATCTATAGTAGTTAAGAATCTCTTCCTTGGAAGTTTTGCAAGTCAGTTTGTGATGGAGTCGATTTACTACACTTTACTTTCAGGCTATTGCCACCGCGAGAATGAAGGGGGAGTTCCCAGAAAGAATTGGACAACCAGAATGTCAGGCATGTATTTATTTAATTATCTTTACTTATCTAAAATTACCGTGTTACATCATGCCTCGTAAATTTTATCTTCACATTTATTCATTATTAATCCACATATAATTATTTGGTATTATCTGATTATAATTGGGATGACATATGGGATGTGCTCATTTTCTTCATCAGATTCGGTGATGAAATTTGGCTAATTTACACCAAACCCACCGTATATATAACTATCTGAAATGATATTTTCGTCGTAAAGTTTTGGTTTAGAATAATGAGCTCTCTTGTATATAATTATCCTTCAAATTTGATTGGCATAGATATCATATTGTTTAGCTGGGCCTAGAATCTCTAGATTGGAGCTTTGATAATTTAACTTTGAGATTATTTTTCTTGTATTCTGTAGTTTCTTGGATGCTGTAGGTTTTATAACTTAAACGAACACTAAATAGTTTAAAGTGTAGAATGTTTCCTTAATTGTTGACAATGAAATGACATTTTCATTTGCGCATAATCCAGTACTACTTGAAGACAGGAACTTGCAAGTTTGGGGCTACGTGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATTGCTGGAAGAGTTGCCTTAAATATTTTAGGCTATCCACTTCGCCCGGTTAGGATATAACTACTCCCTTATATTCATAGCACGCTTTGTGCAGTTCGTAAGTTTTTGTATGTTCTTGTTCTCTCTCATGCATATGTATGTAAAGATGAGCACGTATGTCGATGAAAAGTTACAAGGGAAGAAAAAACTAGAAGACTAATTCTTTGGTGAAAATGTATAGGAAATTGGCACCTAAACACAGCTTATTGAAGAGCTAATAGAAAAGGGTATAGAAAGTTAGCACCTAAACACAGCTTATTGAAGTGCAAATAGAAATTAAGAAAACAGCTAAACAACAAAAATGGTGTTTGACATGCCAACTTGCTAAGTTCAGATCTTCCTTTGTCAAGTTATCTGTGCTTTTATGCTAAAAATATTTATTGTCCATTCTCTCCCCCACATCCCCAATTGTGCAGAGTGAAACTGAATGTGCTTATTATTTAAGAACTGGACAATGCAAGTTTGGAAATACATGTAAATTCCACCATCCTCAACCGACTAATATGATGGTCTCACTGCGTGGCTCCCCTATTTATCCAACCCTACAATCGCCAACTCCTGGTCAGCAGTCATATCCAGGAGGAAGCACAAATTGGTCAAGGGCTTCCTTTATTCCCAGTCCACGATGGCAAGGCCCTTCAAGTTATGCATCTTTAATTTTACCTCAAGGAGTTCTCTCTGTTCCAGGCTGGAATACATTCAATGTAAGTTCTATTCCTTTCCCGTGTTCGAATAAGTATGATATACGCTGTCATGTTTATTTACTCTGTTTTTATTCAATGCATGAGTGTTGTGGAATACGAGTCGATGGAAATGTCTGTTACCTAGAAGAAAATTATTCTTAAACTTTTTCCTTTTAATTTGTGTTGGAAGAAAAATAACTTTCATATGAATGTTTAAATGAGTCTTCCTAGACATCTTTTTCCATGTTGAAGTTGCATTATTTCATGGGCAACTTGCAAGACCTTTGCGGTTGAAGAATCGAGTTAATATTCCTATCAGGAAGCCAAAAGAAGGAAACAAGAAAACATGGAAAGTGATAGAACATACTTATACTCAAGTTTTTTTATACCCCGGTAATGATTTGGAAGATCCAAAACAAAAAAATAGTGGTATTTGCTAGCAACAACATAATGGAGGTAGTCAAACAATATAGATGGATCCGAAATCTGATTCAAATCAATATAACACCTATGGGTACATAAGAAATGTATTGAACCGATTCTTTTTAATGAATAAATCCGATTGCAACTTCGAATATGAAATTCAAAGGGATCAAATAGGAAATGATACTCTGAATCATAGAACTATAATGACAAGTTATTTTAATAATCACCTTCTGTCTGGCACCCTTATACCGCTTCTTTTTGGAATTCTTTAACCTTTCACAGCGAAGTTACTCATAGGTTGGTGATTTTTACAGGATCAGCTAGGATCAGTTTCATCATCAGAAAGTCCACAACAAACGGTGGGGACATAGTCAGATTTATGAAGCTTAACCCCAGAGTGAATGACTAGATCCAGGATCTGTAGTAGTCTCTTCTCTGATATGTTCTAATTAACCTTTTTTGGTTTTTGGCATTGCAGAGGGAGAATGTATTTCCTGAGAGGCCTGGCCAGCCTGAATGTCAATTTTACATGAAGACTGGAGATTGCAAGTTCGGTGCCGTTTGTCGGTTTCATCATCCCAGAGAACGAGTAATTCCTGCTCCAGATTGTGTCTTGAGTCCAATTGGCCTACCGTTACGTCCGGTGAGTTGCGATACTACTTTTGATTTTCTAATTTCCTAGGCAATATATGGATCTACAGTAAAAAAAAAAAAAACCCTTTTCCAGCTTTGATTCATGTATGTTACTTAACCCATGTTGAGGAGTTATGATGATTGTTTAAGAGCTGCCATTAATTCTGAACTTTCCTATGGTTTTTTTACACAGCATTCTGATGGTGATTCTGAATTATTGCTAGATCATTTTTCCTAGTGCTTGATTATCATTAAATAGTTGGTTAAAATTGTACTCATCTCTGTTCTATCCGGTATTTCTTGATGCAAAAGGACCTTATGATCTGTTAATATGAGGAGCTAGTTTTTATGAATTTTGTTTTCCATGAACAGGGAGAGCCTTTGTGCATCTTTTATTCGCGTTATGGGATCTGTAAGTTCGGTCCAAGCTGCAAGTTCGATCACCCTATGGGAATCTTCGCATACAATCTCTCTGCAGCGTCAACGCCGAACGCCCCAGTTCAGCATTTGTTTGGGACGTCATCAGGAACTACTGCACTAAGTTTGTCATCTGAAGGGCTAGTCGAAGCAGGATCTGCAAAGCCGAGACGACTATCAATCACAGAGACACGAGAGATGTCATCTGATGATGAAAACATCGAGGCCGAGGGCTGAAGGTCGTAAGTCGTTTCTAGTACCCCTTTTACAATCTTTTGGAAGATAAAAGAAGAGAGGTATTTGTGTAAATTGATGATGCCTGGCTGGAAAAAAGATGTGTACAGGGAGGGTTCATGTAAAGTTGATCCTGTGTTTCTGAAAATGCATTTCAGAATATGGTAGCGCAGCAGATGATTAATTCCTCTGAATTTATGTTTCTGCATTGTATAAAAAGATCTGCAGCAGATGATGTCAGTTTTTTGTTCTTCCCCCTTTGCTCAAACAACAATTTATGAACAACTCTTCTCATTTCTCCCAAACCTTTCTCAAATTTGGGATTCCAAATTCTTGTAAACAACACAACGCTTGCTGTTTTCCCCAAATTTTTATGCCCTTTTTGGCTCTTCAATCAATCAATAATCATGTTCTCATCA

mRNA sequence

CTTCCACCACTGAAAAAGAAAAAGGCTAAAATGTTAGCAGGAATCTGTTGAACGTGGCGGAACCAAAGCGAGAGTTATTACCAAATCCTTTAATCGCGAGAGTCTTCTAATCTTCGTCGTTCGTTTTTCCTCTCCAATAATCGTCAGCAACAATGGAGGGATGGATGTTTTGGTTGGTTTCGTTACTCTTTTCTCTCTCTTTTTAGTTTTTTTGTGTGGAGAGAAGACAACGCCCTTTTCTCTCTTCCTCTCTCTCTCTCTCTAAAAAACCCACCTACAGAAAATCGTCGATCAATCCCATATACTAAATTTTTCGTTTCATTCCTCTGTTTTTCCCCCGATTTTGTTTTTTCTTTGGTGTTTGAGAAGGAAATTGGATTGTGGGTTTTTGATTTGATCGGAATTAGTGCTGTGGAAGTGGTGGATTGTGGTGGAAATGGGGATTTGGTTGGTGGGTTTTGATGGGATGAGTTCTTCGCCGGCGATGGGGCGATGATTTAACGACGATGCTCCTAAGCGATGGAATACGATTCTGGAATTCCGATGTCTGTGACGGAGGGACACTCCTCTGCTCTCACGCCGTCCTTGCGCGAAGATGCACTCTGGCAAATGAACTTGGGATCAGGTGAAATAATGGGATCTGGATCTTATCCCGTGCGACCTGGAGAGCCAGACTGTTCTTATTACATCAGAACTGGCCTCTGTAGATTTGGAGCTACATGTAGATTTAATCATCCACCTAATAGAGAGCTGTACTACTTGAAGACAGGAACTTGCAAGTTTGGGGCTACGTGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATTGCTGGAAGAGTTGCCTTAAATATTTTAGGCTATCCACTTCGCCCGAGTGAAACTGAATGTGCTTATTATTTAAGAACTGGACAATGCAAGTTTGGAAATACATGTAAATTCCACCATCCTCAACCGACTAATATGATGGTCTCACTGCGTGGCTCCCCTATTTATCCAACCCTACAATCGCCAACTCCTGGTCAGCAGTCATATCCAGGAGGAAGCACAAATTGGTCAAGGGCTTCCTTTATTCCCAGTCCACGATGGCAAGGCCCTTCAAGTTATGCATCTTTAATTTTACCTCAAGGAGTTCTCTCTGTTCCAGGCTGGAATACATTCAATGATCAGCTAGGATCAGTTTCATCATCAGAAAGTCCACAACAAACGAGGGAGAATGTATTTCCTGAGAGGCCTGGCCAGCCTGAATGTCAATTTTACATGAAGACTGGAGATTGCAAGTTCGGTGCCGTTTGTCGGTTTCATCATCCCAGAGAACGAGTAATTCCTGCTCCAGATTGTGTCTTGAGTCCAATTGGCCTACCGTTACGTCCGGGAGAGCCTTTGTGCATCTTTTATTCGCGTTATGGGATCTGTAAGTTCGGTCCAAGCTGCAAGTTCGATCACCCTATGGGAATCTTCGCATACAATCTCTCTGCAGCGTCAACGCCGAACGCCCCAGTTCAGCATTTGTTTGGGACGTCATCAGGAACTACTGCACTAAGTTTGTCATCTGAAGGGCTAGTCGAAGCAGGATCTGCAAAGCCGAGACGACTATCAATCACAGAGACACGAGAGATGTCATCTGATGATGAAAACATCGAGGCCGAGGGCTGAAGGTCGTAAGTCGTTTCTAGTACCCCTTTTACAATCTTTTGGAAGATAAAAGAAGAGAGGTATTTGTGTAAATTGATGATGCCTGGCTGGAAAAAAGATGTGTACAGGGAGGGTTCATGTAAAGTTGATCCTGTGTTTCTGAAAATGCATTTCAGAATATGGTAGCGCAGCAGATGATTAATTCCTCTGAATTTATGTTTCTGCATTGTATAAAAAGATCTGCAGCAGATGATGTCAGTTTTTTGTTCTTCCCCCTTTGCTCAAACAACAATTTATGAACAACTCTTCTCATTTCTCCCAAACCTTTCTCAAATTTGGGATTCCAAATTCTTGTAAACAACACAACGCTTGCTGTTTTCCCCAAATTTTTATGCCCTTTTTGGCTCTTCAATCAATCAATAATCATGTTCTCATCA

Coding sequence (CDS)

ATGGAATACGATTCTGGAATTCCGATGTCTGTGACGGAGGGACACTCCTCTGCTCTCACGCCGTCCTTGCGCGAAGATGCACTCTGGCAAATGAACTTGGGATCAGGTGAAATAATGGGATCTGGATCTTATCCCGTGCGACCTGGAGAGCCAGACTGTTCTTATTACATCAGAACTGGCCTCTGTAGATTTGGAGCTACATGTAGATTTAATCATCCACCTAATAGAGAGCTGTACTACTTGAAGACAGGAACTTGCAAGTTTGGGGCTACGTGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATTGCTGGAAGAGTTGCCTTAAATATTTTAGGCTATCCACTTCGCCCGAGTGAAACTGAATGTGCTTATTATTTAAGAACTGGACAATGCAAGTTTGGAAATACATGTAAATTCCACCATCCTCAACCGACTAATATGATGGTCTCACTGCGTGGCTCCCCTATTTATCCAACCCTACAATCGCCAACTCCTGGTCAGCAGTCATATCCAGGAGGAAGCACAAATTGGTCAAGGGCTTCCTTTATTCCCAGTCCACGATGGCAAGGCCCTTCAAGTTATGCATCTTTAATTTTACCTCAAGGAGTTCTCTCTGTTCCAGGCTGGAATACATTCAATGATCAGCTAGGATCAGTTTCATCATCAGAAAGTCCACAACAAACGAGGGAGAATGTATTTCCTGAGAGGCCTGGCCAGCCTGAATGTCAATTTTACATGAAGACTGGAGATTGCAAGTTCGGTGCCGTTTGTCGGTTTCATCATCCCAGAGAACGAGTAATTCCTGCTCCAGATTGTGTCTTGAGTCCAATTGGCCTACCGTTACGTCCGGGAGAGCCTTTGTGCATCTTTTATTCGCGTTATGGGATCTGTAAGTTCGGTCCAAGCTGCAAGTTCGATCACCCTATGGGAATCTTCGCATACAATCTCTCTGCAGCGTCAACGCCGAACGCCCCAGTTCAGCATTTGTTTGGGACGTCATCAGGAACTACTGCACTAAGTTTGTCATCTGAAGGGCTAGTCGAAGCAGGATCTGCAAAGCCGAGACGACTATCAATCACAGAGACACGAGAGATGTCATCTGATGATGAAAACATCGAGGCCGAGGGCTGA

Protein sequence

MEYDSGIPMSVTEGHSSALTPSLREDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTLQSPTPGQQSYPGGSTNWSRASFIPSPRWQGPSSYASLILPQGVLSVPGWNTFNDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSAASTPNAPVQHLFGTSSGTTALSLSSEGLVEAGSAKPRRLSITETREMSSDDENIEAEG

Homology

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BLAST of CmaCh11G009420 vs. ExPASy Swiss-Prot
Match: Q9SWF9 (Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 4.8e-165
Identity = 279/418 (66.75%), Postives = 318/418 (76.08%), Query Frame = 0


Query: 22  SLREDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNREL--- 81
           ++ ++A+WQMNL S E M SG YP  PGEPDCSYYIRTGLCRFGATCRFNHPPNR+L   
Sbjct: 5   TIPQEAMWQMNLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 64

Query: 82  ------------------YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSE 141
                             YYLKTGTCKFGATC+FHHP+DKAG+AGRVALNILGYPLRP+E
Sbjct: 65  TARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNE 124

Query: 142 TECAYYLRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTLQSP-TPGQQSYPGGSTNWS 201
           +E AYYLRTGQCKFGNTCKFHHPQP+NM++S+RGS +YPT+QSP TPGQQSY  G TNWS
Sbjct: 125 SERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNWS 184

Query: 202 RASFIPSPRWQGPSSYASLILPQGVLSVPGWNTFNDQLGSVSSSESPQQT---------- 261
            +S++PSPRWQGPSSYA LILPQGV+SVPGW+T+  Q+G    SESPQQT          
Sbjct: 185 SSSYVPSPRWQGPSSYAPLILPQGVVSVPGWSTYGGQMG----SESPQQTMRNDQTYGTS 244

Query: 262 ------------------------------RENVFPERPGQPECQFYMKTGDCKFGAVCR 321
                                         R+N+FPERP QPECQFYMKTGDCKFGAVCR
Sbjct: 245 HQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCR 304

Query: 322 FHHPRERVIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSA 378
           FHHPRER IPAPDCVLSPIGLPLRPGEPLC+FYSRYGICKFGPSCKFDHPMGIF YN+ A
Sbjct: 305 FHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYNV-A 364

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BLAST of CmaCh11G009420 vs. ExPASy Swiss-Prot
Match: Q8GXX7 (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=ZFN1 PE=1 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 3.3e-134
Identity = 241/430 (56.05%), Postives = 283/430 (65.81%), Query Frame = 0


Query: 1   MEYDSGIPMSVTEGHSSALTPSLREDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTG 60
           M++++G+PM       S+L+P + +DA+WQMNL S E M +GSYP RPGEPDCSYYIRTG
Sbjct: 1   MDFNAGVPM-------SSLSPLMNQDAMWQMNLSSDETMETGSYPERPGEPDCSYYIRTG 60

Query: 61  LCRFGATCRFNHPPNREL---------------------YYLKTGTCKFGATCKFHHPRD 120
           LCRFG+TCRFNHP +REL                     YYLKTGTCKFG TCKFHHPR+
Sbjct: 61  LCRFGSTCRFNHPRDRELVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRN 120

Query: 121 KAGIAGRVALNILGYPLRPSETECAYYLRTGQCKFGNTCKFHH--PQPTNMMVSLRGSPI 180
           KAGIAGRV+LN+LGYPLR +E +CAY+LRTG CKFG TCKF+H  PQPTNMMV       
Sbjct: 121 KAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMV------- 180

Query: 181 YPTLQSPTPGQQSYPGGSTNWSRASFIPSPRWQGPSSYASLILPQGVLSVPGWNTFNDQL 240
                 PT GQQSYP     WSRASFI SPRWQ PSSYASLI+PQGV+ V GWN ++ QL
Sbjct: 181 ------PTSGQQSYP-----WSRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQL 240

Query: 241 GSVSSS-----------------ESPQQT----------------------RENVFPERP 300
           GSVS S                 ES  Q+                      RENVFPERP
Sbjct: 241 GSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERP 300

Query: 301 GQPECQFYMKTGDCKFGAVCRFHHPRERVIPAPDCVLSPIGLPLRPGEPLCIFYSRYGIC 360
           GQPECQFYMKTGDCKFG VC+FHHPR+R  P PDC+LS IGLPLRPGEPLC+FY+RYGIC
Sbjct: 301 GQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGIC 360

Query: 361 KFGPSCKFDHPMGIFAYNLSAASTPNAPVQHLFGTSSGTTALSLSSEGLVEAGSAKPRRL 369
           KFGPSCKFDHPM +F Y+ +A+ T                      + +VE  + K RRL
Sbjct: 361 KFGPSCKFDHPMRVFTYDNTASET----------------------DEVVETSTGKSRRL 383

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BLAST of CmaCh11G009420 vs. ExPASy Swiss-Prot
Match: Q2QT65 (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 1.5e-126
Identity = 221/418 (52.87%), Postives = 272/418 (65.07%), Query Frame = 0


Query: 25  EDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNREL------ 84
           E+A+WQM LG GE M S  YP R GEPDCSYY+RTGLCRFG TC+FNHPPNR+L      
Sbjct: 44  EEAMWQMTLGGGESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAAR 103

Query: 85  ---------------YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETEC 144
                          YYLKTGTCKFGATCKFHHPR+KA +A RV LN+LGYP+RP+E EC
Sbjct: 104 MNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKEC 163

Query: 145 AYYLRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTLQSPTPGQQSYPGGSTNWS---R 204
           AYYLRTGQCKF +TCKFHHPQP+N MV++R S   P   + +PGQ +YPG  TNW+    
Sbjct: 164 AYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPGQSATSPGQHTYPGAVTNWTLSRS 223

Query: 205 ASFIPSPRWQGPSSYASLILPQGVLSVPGWNTFNDQLGSVSSSESPQQT----------- 264
           ASFI SPRW G S YA +I+PQG++ VPGWN +  Q+GS SS +  Q+T           
Sbjct: 224 ASFIASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQMGS-SSPDDQQRTPVTTQYYGSRQ 283

Query: 265 ----------------------------RENVFPERPGQPECQFYMKTGDCKFGAVCRFH 324
                                        EN+FPERP QPECQFYMKTGDCKFGAVC+FH
Sbjct: 284 SETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFH 343

Query: 325 HPRERVIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSAAS 377
           HP+ER++PAP+C L+ +GLPLRPGEP+C FYSRYGICKFGP+CKFDHPMG   Y   +A+
Sbjct: 344 HPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMY--GSAT 403

[Close]

BLAST of CmaCh11G009420 vs. ExPASy Swiss-Prot
Match: Q2R4J4 (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0472000 PE=2 SV=2)

HSP 1 Score: 447.6 bits (1150), Expect = 1.4e-124
Identity = 219/415 (52.77%), Postives = 268/415 (64.58%), Query Frame = 0


Query: 25  EDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNREL------ 84
           E+A+WQMNL  GE M +G YP R GEPDCSYY+RTGLCRFG TC+FNHP +R++      
Sbjct: 36  EEAMWQMNL--GEAMEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAAR 95

Query: 85  ---------------YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETEC 144
                          YYLKTGTCKFGATCKFHHPR+KA IA RV LN LGYPLRP+E EC
Sbjct: 96  MKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKEC 155

Query: 145 AYYLRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTLQSPTPGQQSYPGGSTNW---SR 204
           AYYLRTGQCKFG+TCKFHHPQP+N MV++RGS   P     +P Q +YPG  TNW     
Sbjct: 156 AYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNWPLSRS 215

Query: 205 ASFIPSPRWQGPSSYASLILPQGVLSVPGWNTFNDQLGSVSS------------------ 264
           ASFI SPRW G SSYA +I+P G++ VPGWN +  Q+GS SS                  
Sbjct: 216 ASFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQYYTGSRH 275

Query: 265 SESPQQ---------------------TRENVFPERPGQPECQFYMKTGDCKFGAVCRFH 324
           SE+P                        RE++FPERP QPECQFYMKTGDCKFGAVC+FH
Sbjct: 276 SETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFGAVCKFH 335

Query: 325 HPRERVIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSAAS 377
           HP+ER+IP P+C LS +GLPLRPGEP+C FYSRYGICKFGP+CKFDHPMG   Y L+ + 
Sbjct: 336 HPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVMYGLATSP 395

[Close]

BLAST of CmaCh11G009420 vs. ExPASy Swiss-Prot
Match: Q5JLB5 (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0917400 PE=2 SV=2)

HSP 1 Score: 434.9 bits (1117), Expect = 9.4e-121
Identity = 209/370 (56.49%), Postives = 243/370 (65.68%), Query Frame = 0


Query: 22  SLREDALW-QMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNREL-- 81
           +L  + +W QM +     M  G YP R GEPDC+YY+RTGLCRFG +CRFNHP +R L  
Sbjct: 54  ALYGEGMWQQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAI 113

Query: 82  -------------------YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPS 141
                              YYLKTGTCKFG TCKFHHPR+KAGIAGRV LN LGYPLRPS
Sbjct: 114 ASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPS 173

Query: 142 ETECAYYLRTGQCKFGNTCKFHHPQPTNMMVSLRGSPIYPTLQSPTPGQQSYPGGSTNWS 201
           E ECAYYL+TGQCK+GNTCKFHHP+  N M S RGSPIYP++ S       Y G   +W+
Sbjct: 174 EKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWA 233

Query: 202 --RASFIPSPRWQGPSSYASLILPQGVLSVPGWNTFNDQLGSVSSSES------PQQT-- 261
             R SFIPSPRWQ PS+YA +I+PQG++ VP WN++  Q+  VSSSES       QQT  
Sbjct: 234 FPRGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYG 293

Query: 262 -------------------------------RENVFPERPGQPECQFYMKTGDCKFGAVC 321
                                          RENVFPERP QPECQ+YMKTGDCKFGAVC
Sbjct: 294 TSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVC 353

Query: 322 RFHHPRERVIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDH-----PMGIF 324
           +FHHPR R +P PDCVLSP+GLPLRPGE LC FYSRYGICKFG +CKFDH     PMG++
Sbjct: 354 KFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGVY 413

[Close]

BLAST of CmaCh11G009420 vs. TAIR 10
Match: AT3G02830.1 (zinc finger protein 1 )

HSP 1 Score: 479.6 bits (1233), Expect = 2.4e-135
Identity = 241/430 (56.05%), Postives = 283/430 (65.81%), Query Frame = 0


Query: 1   MEYDSGIPMSVTEGHSSALTPSLREDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTG 60
           M++++G+PM       S+L+P + +DA+WQMNL S E M +GSYP RPGEPDCSYYIRTG
Sbjct: 1   MDFNAGVPM-------SSLSPLMNQDAMWQMNLSSDETMETGSYPERPGEPDCSYYIRTG 60

Query: 61  LCRFGATCRFNHPPNREL---------------------YYLKTGTCKFGATCKFHHPRD 120
           LCRFG+TCRFNHP +REL                     YYLKTGTCKFG TCKFHHPR+
Sbjct: 61  LCRFGSTCRFNHPRDRELVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRN 120

Query: 121 KAGIAGRVALNILGYPLRPSETECAYYLRTGQCKFGNTCKFHH--PQPTNMMVSLRGSPI 180
           KAGIAGRV+LN+LGYPLR +E +CAY+LRTG CKFG TCKF+H  PQPTNMMV       
Sbjct: 121 KAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMV------- 180

Query: 181 YPTLQSPTPGQQSYPGGSTNWSRASFIPSPRWQGPSSYASLILPQGVLSVPGWNTFNDQL 240
                 PT GQQSYP     WSRASFI SPRWQ PSSYASLI+PQGV+ V GWN ++ QL
Sbjct: 181 ------PTSGQQSYP-----WSRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQL 240

Query: 241 GSVSSS-----------------ESPQQT----------------------RENVFPERP 300
           GSVS S                 ES  Q+                      RENVFPERP
Sbjct: 241 GSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERP 300

Query: 301 GQPECQFYMKTGDCKFGAVCRFHHPRERVIPAPDCVLSPIGLPLRPGEPLCIFYSRYGIC 360
           GQPECQFYMKTGDCKFG VC+FHHPR+R  P PDC+LS IGLPLRPGEPLC+FY+RYGIC
Sbjct: 301 GQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGIC 360

Query: 361 KFGPSCKFDHPMGIFAYNLSAASTPNAPVQHLFGTSSGTTALSLSSEGLVEAGSAKPRRL 369
           KFGPSCKFDHPM +F Y+ +A+ T                      + +VE  + K RRL
Sbjct: 361 KFGPSCKFDHPMRVFTYDNTASET----------------------DEVVETSTGKSRRL 383

[Close]

BLAST of CmaCh11G009420 vs. TAIR 10
Match: AT5G16540.1 (zinc finger nuclease 3 )

HSP 1 Score: 425.6 bits (1093), Expect = 4.1e-119
Identity = 218/387 (56.33%), Postives = 267/387 (68.99%), Query Frame = 0


Query: 16  SSALTPSLREDALWQMNLGSGEIMG-SGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPP 75
           S+ L+P L ++A+WQMNLGS + MG  GSYP R GEPDC+YYIRTGLCRFG+TCRFNHP 
Sbjct: 10  STFLSPLLNQNAMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPH 69

Query: 76  NREL---------------------YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILG 135
           +R+L                     +YLKTGTCKFG TCKFHHPR+KAGI G V++N+L 
Sbjct: 70  DRKLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLS 129

Query: 136 YPLRPSETECAYYLRTGQCKFGNTCKFHHP--QPTNMMVSLRGSPIYPTLQSPTPGQQSY 195
           YPLRP+E +C+Y+LR GQCKFG TCKF+HP  Q TN+MVS+RGSP+Y  LQS T GQ SY
Sbjct: 130 YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLT-GQPSY 189

Query: 196 PGGSTNWSRASFIPS-PRWQGPSSYASLILPQGVLSVPGWNTFND-QLGSVSSSESPQQT 255
                +WSR SF+ + PR Q PS +AS    QG L   G+++ N   LG  +        
Sbjct: 190 -----SWSRTSFVANPPRLQDPSGFAS--GSQGGLFSSGFHSGNSVPLGFYA------LP 249

Query: 256 RENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVIPAPDCVLSPIGLPLRPGEPLC 315
           RENVFPERPGQPECQFYMKTGDCKFG VC+FHHPR+R  P PDCVLS +GLPLRPGEPLC
Sbjct: 250 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLC 309

Query: 316 IFYSRYGICKFGPSCKFDHPMGIFAYNLSAASTPNAPVQHLFGTSSGTTALSLSSEGLVE 375
           +FYSRYGICKFGPSCKFDHPM +F YN + AS   +   H        TA++     L+ 
Sbjct: 310 VFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLH------QETAITTELRNLLV 369

Query: 376 AGSAKPRRLSITETREMSSDDENIEAE 377
           + S + +  S+ ET   S+ D  ++A+
Sbjct: 370 SSSVEAKPTSLPET--TSAKDTIVDAQ 374

[Close]

BLAST of CmaCh11G009420 vs. TAIR 10
Match: AT5G16540.3 (zinc finger nuclease 3 )

HSP 1 Score: 416.0 bits (1068), Expect = 3.2e-116
Identity = 213/375 (56.80%), Postives = 258/375 (68.80%), Query Frame = 0


Query: 28  LWQMNLGSGEIMG-SGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNREL-------- 87
           +WQMNLGS + MG  GSYP R GEPDC+YYIRTGLCRFG+TCRFNHP +R+L        
Sbjct: 1   MWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK 60

Query: 88  -------------YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAY 147
                        +YLKTGTCKFG TCKFHHPR+KAGI G V++N+L YPLRP+E +C+Y
Sbjct: 61  GEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSY 120

Query: 148 YLRTGQCKFGNTCKFHHP--QPTNMMVSLRGSPIYPTLQSPTPGQQSYPGGSTNWSRASF 207
           +LR GQCKFG TCKF+HP  Q TN+MVS+RGSP+Y  LQS T GQ SY     +WSR SF
Sbjct: 121 FLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLT-GQPSY-----SWSRTSF 180

Query: 208 IPS-PRWQGPSSYASLILPQGVLSVPGWNTFND-QLGSVSSSESPQQTRENVFPERPGQP 267
           + + PR Q PS +AS    QG L   G+++ N   LG  +        RENVFPERPGQP
Sbjct: 181 VANPPRLQDPSGFAS--GSQGGLFSSGFHSGNSVPLGFYA------LPRENVFPERPGQP 240

Query: 268 ECQFYMKTGDCKFGAVCRFHHPRERVIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFG 327
           ECQFYMKTGDCKFG VC+FHHPR+R  P PDCVLS +GLPLRPGEPLC+FYSRYGICKFG
Sbjct: 241 ECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFG 300

Query: 328 PSCKFDHPMGIFAYNLSAASTPNAPVQHLFGTSSGTTALSLSSEGLVEAGSAKPRRLSIT 377
           PSCKFDHPM +F YN + AS   +   H        TA++     L+ + S + +  S+ 
Sbjct: 301 PSCKFDHPMRVFTYNNNTASPSPSSSLH------QETAITTELRNLLVSSSVEAKPTSLP 353

[Close]

BLAST of CmaCh11G009420 vs. TAIR 10
Match: AT5G16540.2 (zinc finger nuclease 3 )

HSP 1 Score: 404.8 bits (1039), Expect = 7.4e-113
Identity = 212/387 (54.78%), Postives = 260/387 (67.18%), Query Frame = 0


Query: 16  SSALTPSLREDALWQMNLGSGEIMG-SGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPP 75
           S+ L+P L ++A+WQMNLGS + MG  GSYP R GEPDC+YYIRTGLCRFG+TCRFNHP 
Sbjct: 10  STFLSPLLNQNAMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPH 69

Query: 76  NREL---------------------YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILG 135
           +R+L                     +YLKTGTCKFG TCKFHHPR+KAGI G V++N+L 
Sbjct: 70  DRKLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLS 129

Query: 136 YPLRPSETECAYYLRTGQCKFGNTCKFHHP--QPTNMMVSLRGSPIYPTLQSPTPGQQSY 195
           YPLRP+E +C+Y+LR GQCKFG TCKF+HP  Q TN+MVS+RGSP+Y  LQS T GQ SY
Sbjct: 130 YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLT-GQPSY 189

Query: 196 PGGSTNWSRASFIPS-PRWQGPSSYASLILPQGVLSVPGWNTFND-QLGSVSSSESPQQT 255
                +WSR SF+ + PR Q PS +AS    QG L   G+++ N   LG  +        
Sbjct: 190 -----SWSRTSFVANPPRLQDPSGFAS--GSQGGLFSSGFHSGNSVPLGFYA------LP 249

Query: 256 RENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVIPAPDCVLSPIGLPLRPGEPLC 315
           RENVFPERPGQPECQFYMKTGDCKFG VC+FHHPR+R  P PDCVLS        GEPLC
Sbjct: 250 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLS-------SGEPLC 309

Query: 316 IFYSRYGICKFGPSCKFDHPMGIFAYNLSAASTPNAPVQHLFGTSSGTTALSLSSEGLVE 375
           +FYSRYGICKFGPSCKFDHPM +F YN + AS   +   H        TA++     L+ 
Sbjct: 310 VFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLH------QETAITTELRNLLV 367

Query: 376 AGSAKPRRLSITETREMSSDDENIEAE 377
           + S + +  S+ ET   S+ D  ++A+
Sbjct: 370 SSSVEAKPTSLPET--TSAKDTIVDAQ 367

[Close]

BLAST of CmaCh11G009420 vs. TAIR 10
Match: AT2G47850.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 330.9 bits (847), Expect = 1.4e-90
Identity = 174/406 (42.86%), Postives = 226/406 (55.67%), Query Frame = 0


Query: 25  EDALWQMNLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRE------- 84
           ++++W++ L      GS SYP RPG PDC+YY+RTG+C +G  CR+NHP +R        
Sbjct: 29  QESMWRLGL------GSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVR 88

Query: 85  --------------LYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETEC 144
                          +YLKTGTCKFGA+CKFHHP++  G    V LNI GYP+R  + EC
Sbjct: 89  ATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNEC 148

Query: 145 AYYLRTGQCKFGNTCKFHHPQPTNMMV---SLRGSPIYPTLQSPTPGQQSYPGGSTNWSR 204
           +YYL+TGQCKFG TCKFHHPQP    V          YP++QS  P Q   P  S   +R
Sbjct: 149 SYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVAR 208

Query: 205 ASFIPSPRWQGPSSYASLILPQGVLSVPGWNTFN-----------------------DQL 264
            + +P    QG  +Y  ++L  GV+ +PGW+ ++                        QL
Sbjct: 209 -TLLPGSYMQG--AYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVTQL 268

Query: 265 GSVS----------SSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERV 324
            S +          SS +    +E  FPERPG+PECQ+Y+KTGDCKFG  C+FHHPR+RV
Sbjct: 269 TSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRV 328

Query: 325 IPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSAASTPNA-- 369
            P  +CVLSPIGLPLRPG   C FY + G CKFG +CKFDHPMG   YN SA+S  +A  
Sbjct: 329 PPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPV 388

The following BLAST results are available for this feature:

BLAST of CmaCh11G009420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SWF9	4.8e-165	66.75	Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum sativum OX=3888 PE=...	[more]
Q8GXX7	3.3e-134	56.05	Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q2QT65	1.5e-126	52.87	Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica OX...	[more]
Q2R4J4	1.4e-124	52.77	Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica OX...	[more]
Q5JLB5	9.4e-121	56.49	Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of CmaCh11G009420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02830.1	2.4e-135	56.05	zinc finger protein 1	[more]
AT5G16540.1	4.1e-119	56.33	zinc finger nuclease 3	[more]
AT5G16540.3	3.2e-116	56.80	zinc finger nuclease 3	[more]
AT5G16540.2	7.4e-113	54.78	zinc finger nuclease 3	[more]
AT2G47850.1	1.4e-90	42.86	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 283..310 e-value: 5.6E-7 score: 39.2 coord: 76..98 e-value: 0.1 score: 21.7 coord: 237..264 e-value: 7.8E-6 score: 35.4 coord: 47..74 e-value: 2.1E-5 score: 34.0 coord: 117..144 e-value: 2.1E-5 score: 33.9
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 49..74 e-value: 5.0E-8 score: 32.7 coord: 120..144 e-value: 1.7E-9 score: 37.3 coord: 285..310 e-value: 2.5E-10 score: 40.0 coord: 239..264 e-value: 8.6E-9 score: 35.1 coord: 79..98 e-value: 6.0E-8 score: 32.4
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 283..311 score: 14.70859
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 117..145 score: 15.102932
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 79..99 score: 10.492884
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 47..75 score: 14.586532
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 237..265 score: 14.595921
None	No IPR available	GENE3D	4.10.1000.10		coord: 79..154 e-value: 7.9E-17 score: 62.9
None	No IPR available	GENE3D	2.30.30.1190		coord: 30..78 e-value: 2.7E-5 score: 26.2
None	No IPR available	GENE3D	4.10.1000.10		coord: 226..312 e-value: 1.0E-13 score: 53.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..237
None	No IPR available	PANTHER	PTHR12506:SF18	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33-RELATED	coord: 10..78
None	No IPR available	PANTHER	PTHR12506	PROTEIN PHOSPHATASE RELATED	coord: 229..376
None	No IPR available	PANTHER	PTHR12506	PROTEIN PHOSPHATASE RELATED	coord: 79..231
None	No IPR available	PANTHER	PTHR12506	PROTEIN PHOSPHATASE RELATED	coord: 10..78
None	No IPR available	PANTHER	PTHR12506:SF18	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33-RELATED	coord: 229..376 coord: 79..231
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 286..310
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 52..75
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 119..145
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 241..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G009420.1	CmaCh11G009420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding