CmaCh11G009370 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G009370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	4-hydroxy-4-methyl-2-oxoglutarate aldolase
Location	Cma_Chr11: 4916872 .. 4921093 (+)
RNA-Seq Expression	CmaCh11G009370
Synteny	CmaCh11G009370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGAGGTGAGAAACCCGTAAGTGTCATGCGAGACATGATGATGATCATCATCATCATAATGTGTGCGTCCGTACTCATCATCATAAATGGGGAAGTAACTTGGTGCATATGAACAAATAAAATGCATGAAGTCCCTATAATTTTCATCTTTAAATTATTCTTATGACATAGCCTTATATATCATTCATACATTTTTCTAAGTAACTTGCATGCGTTGGCCTTCATACGTTCATTATCATTAACATCAAATAGGGTTGTGTCTTAGAAACTTTTGTCATATTGCATCATTATATTTAGTACATGCACATTATCATGCATCTTACATCATCATACTATCATGCATCATCATATAACATCATCACATCGTCATAATGGTATTAGAGCCAAATACCAGATGATGTGCCAGTGAGGACATTGGGCCCCAAATGGGGTAGATTATTAGATCCTACATTGATGGAGAGGAATGAGTGTCAACGAAGACACTAGACCCCAAAGGGGGGAGGATCATGAGATCCCACATCAATTGGAGAGGGGAACGAGTGACAGTGAGGATCCCAGACCTTGAAGGGGGGGTGGATTGTGAGATCACACATCAGTTGGAGAGGAGAAAGATACTTTTTTTATAAGGGTGTGGCTCCTTAGTAGACACGTTTGAAAGCTTTGAAGGGAAACCCGAAAGAAAAAATCCAAAGAGAACAATATCTGCTATTGGCAGGCATGGACTATTACATGTATATACATACATTCATATCTTAAATATAATCGAAAATAACTGTTGATGTTTGTCCCACATTGGCTAATCTAGACAAAGATAATAGGTTTATAAACTCGAATCAACTACGTCATTCTTAAATTAATAAGTTTGACATATTGCCTAAGAATAAAAGTAATATTGATACTCATCCACATGGTGCCTATCCATGAAAGTAGCATTGATACTCATCTTGTACACTAGTTTTCTTCTCAATATTCTAAATGTTTTGATTGGATGGATGATATAATATTCTAAAAAATGGTTGAACTTTTTTTAGATGAATTTTCCTCTTATTTAAATTTTTAAACGAACTAAAAAAAAAAAAAAAAAAAAAGGGAAGATTTAGTTATATTTAGGAGAAGGTGAGTGCCATAATTGGGTTTCACATAACAAACTGATTCCTCAGAATTTCTTCCCTTTTCACTCAATCGTCTTCCATCTTTTCCTCTGCTTTTCTCACTTGTTCTTCAATCCCCCCCATCTCCTTCTTCCTTCCTCTACACCTTCAACACTCCCTTTCCGCCCCATCTTCCTAAGGTATTTCATTCCTTCTGTCCTTTTCATTTCGCTTTTTTCCTGTTTCAAATTGATTTTGATTTGCGCGATTCAGATTTCCGTTCTTCTCAATTGTTTCATGCTCGTTTTCACCAAAAATCAATGTTTCTTTTATTATTTTTTTTTTCATTTTTGTTGTTGTTCAGGTTATAAATGAGTAAAGTTTGTGTTTCTGAAGCTGATTAATTGGGTTTGATCATGTTGGTTATTTCGTTTTCTCGGATTTCAGATGGGTTTTTGTTTAGATCTGTGAATTCCATTGTTAACGTTGTTTTGTTTGTTTATTTACTCTAAACGTTGGATCGTGGAGATTGAGGATTAATGGGATTTGTACGCAATGGGATCAATCATTTCTGTGTTGATTTCATGACTCTTTTTCTGTTCATCAATTTATCGCATTCATATGTACCTTGCCACTTGTCTGATTTGGATTTGATGTTATTTTTTCCCGAATGAAATCTCTGCACCACAATACATTGTATGTGGCTATGTGCTTTTTGGCTTGCTTTTTTATCCTTTAGCTCTCTGTTTTTGTAATCATTCTTTAAGGCAGAAGAAGAAAAGTACATGGATAATCAAGAAGCAGGGATCTCATCTGATAACTGTTGTCTTTTTTTCTTTTCTTCTTTTCTAGAACAAAACTAATATATTTATGGTAATTGCTTACCTTCTGTATTGAAAAGCTAGAACTTGCAAAGAGAAATATGGTATGATTAGAAGAGTTGTGAGAAAGAAGTGATGCCTTTAGTCGAATAGAGGGAGAGTGGAGACATCGGTTGGAGAGGGGAATAAAACATCCTTTATAAGGGTGTGGAAACCTTTCCCTACTAGATGTGTTTTAGAACCGTGAGGCTGATGACGATATGTATTGGAACAAAGAGGACAATATCTACCAGCGATGGGCTTGGGTTGGTTACAAATGGTATCAGAGCCAGATACCGGGCAGTGTGCCAAAGAGGACGCTTCGATTGGAGAGAGGAACGAAACATTCCTTATAAGGGTGTGGAAATCTTTCTCTAGTAGACGCGTTTTAAAATCGTGAGGCTGACGGCGATACATAACGAGTCAAAGTGGGAAATATCTATTAGCGGTGGGATTGGGTTGTTCCTGAGATATGAGAGTGCAATGCGAAATGTAATCTTTGGATGCAAACTTCAGATGGTATTCAAGTTCAAAGGAAAAAACCCCTTGTTTTTGGTTGATTAAATTGGTTTTCCCTGGAAGGATATATAACAAGGAGAAGACCAAGGTCATCTCTTCCTTTCTATTCTACTGTGCAAGCTTTATGGCTTAAGCTGCTGACCTTTTTCAACTTATCCTTGCTGATGCCTAGAAGAGTGAAGAACTCTATGTTGTTGAGTTTATGTTATGAGGTCACAGTTCTAGGGACAAAGCTAAGATCTTGTGAATTGACAGCTTTAGTGCTGTTTGATAGAATTTATGGCTTAAAAGACATAAAATAATCATAATTTTGTTCCTTCTTCTTAGTGCCTTGTAACTGCTACCTTGCTTCTTTGTTTCCTGGTTGTAGAACCTTATAAGTTGGGGAATGTCACAATGAGAGAAGTATCCTACCTCGAGTATGTCTAAAGAGGAGAATGAAACATTTTTTTATAAGGGTGTGTAAACTTCTTTCTATCAGACACGTTTTAAAACCTTAAGGAGAAACTCGAAAGGAAAAGTCGAAAGAGGACAATATCTACTAGCAGTGACCTTGAAGGGTTATAATTATTCATATTTAAATGTTGTAGTTTTTAAAATAGTATAGAAAATTTGAACTTTTAAATGCGTTTCTGGTAACTCGTGAGCTCCACTTTACAAGAACCGAACAACAAATACAAGAATGACATGGATAAACCCTTGACATTGTCATTGACCTTTGTGATCAAGAGCCTTCAAATAAGTGTGCTATCTTTTCCAAGAGGATATTGCTCATTGTTTTGCTATGGCTCAAAGTTGGTTGTGATGTTCTGCTTTCTACTGCACACGAACATATAAGCCTTTTTCTTTTACTTGCTTCTGATAGTGTCTTTATCAGCAAAGTCCTTGTACTTGTGTTTTCTTTCAAGAAATGACCAAATAGTAGAATCTCTGGTTCACTAAATTCAATATTTGGTTACAAACATAAGGTGCTGGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTCCGAGCCCTGGAGCCAATCTTCCAGATATATGGGCGACGCCAAGTGTTTTCAGGACCAGTAGTGACACTAAAGGTGTTTGAAGACAATGTGTTGGTCCGTGAGTTCCTGGAGGAGAAGGGTAAGGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGCAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAGAACAACGGATGGGCTGGCATAGTTGTGAATGGTTGTGTCCGAGACGTGGATGAAATCAATGGGTGTGATATTGGGGTCAGGGCTCTGGCTTCACATCCAATGAAAGCCAACAAGAAGCGGGTTGGAGAGAAGCACGTCCCTATAACTGTGGGCGGGACAAGGATCATGGATGGGGAGTGGCTGTATGCTGATACCGATGGGATTCTGGTTTCACGGACTGAGTTGTCTGTTTAGAGAAGTGTTCTTCAAAGATTTTGATGGCAGGATGATATTGTTTAGACAAGAGCATGAGCAAGAGCTTGTCAGTAATGGTGTTGATGTCTTTTATATTTATCATTAAGATTATGTTATGTGGTTTGAATGATGAACTGCTGCGTTATGTGGCCTTTATTGTTGTATGCAACAGGTTAATGAAAAACTTGATCATTTTGAATCTTTGTTTTGTGTTTAGAACTGAGTTCAGGTGGGCGATTCTTCTGCTAAAAGTAGTAAGTTTGAG

mRNA sequence

ATGTTTGGAGGTGAGAAACCCAATTTCTTCCCTTTTCACTCAATCGTCTTCCATCTTTTCCTCTGCTTTTCTCACTTGTTCTTCAATCCCCCCCATCTCCTTCTTCCTTCCTCTACACCTTCAACACTCCCTTTCCGCCCCATCTTCCTAAGGTGCTGGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTCCGAGCCCTGGAGCCAATCTTCCAGATATATGGGCGACGCCAAGTGTTTTCAGGACCAGTAGTGACACTAAAGGTGTTTGAAGACAATGTGTTGGTCCGTGAGTTCCTGGAGGAGAAGGGTAAGGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGCAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAGAACAACGGATGGGCTGGCATAGTTGTGAATGGTTGTGTCCGAGACGTGGATGAAATCAATGGGTGTGATATTGGGGTCAGGGCTCTGGCTTCACATCCAATGAAAGCCAACAAGAAGCGGGTTGGAGAGAAGCACGTCCCTATAACTGTGGGCGGGACAAGGATCATGGATGGGGAGTGGCTGTATGCTGATACCGATGGGATTCTGGTTTCACGGACTGAGTTGTCTGTTTAGAGAAGTGTTCTTCAAAGATTTTGATGGCAGGATGATATTGTTTAGACAAGAGCATGAGCAAGAGCTTGTCAGTAATGGTGTTGATGTCTTTTATATTTATCATTAAGATTATGTTATGTGGTTTGAATGATGAACTGCTGCGTTATGTGGCCTTTATTGTTGTATGCAACAGGTTAATGAAAAACTTGATCATTTTGAATCTTTGTTTTGTGTTTAGAACTGAGTTCAGGTGGGCGATTCTTCTGCTAAAAGTAGTAAGTTTGAG

Coding sequence (CDS)

ATGTTTGGAGGTGAGAAACCCAATTTCTTCCCTTTTCACTCAATCGTCTTCCATCTTTTCCTCTGCTTTTCTCACTTGTTCTTCAATCCCCCCCATCTCCTTCTTCCTTCCTCTACACCTTCAACACTCCCTTTCCGCCCCATCTTCCTAAGGTGCTGGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTCCGAGCCCTGGAGCCAATCTTCCAGATATATGGGCGACGCCAAGTGTTTTCAGGACCAGTAGTGACACTAAAGGTGTTTGAAGACAATGTGTTGGTCCGTGAGTTCCTGGAGGAGAAGGGTAAGGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGCAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAGAACAACGGATGGGCTGGCATAGTTGTGAATGGTTGTGTCCGAGACGTGGATGAAATCAATGGGTGTGATATTGGGGTCAGGGCTCTGGCTTCACATCCAATGAAAGCCAACAAGAAGCGGGTTGGAGAGAAGCACGTCCCTATAACTGTGGGCGGGACAAGGATCATGGATGGGGAGTGGCTGTATGCTGATACCGATGGGATTCTGGTTTCACGGACTGAGTTGTCTGTTTAG

Protein sequence

MFGGEKPNFFPFHSIVFHLFLCFSHLFFNPPHLLLPSSTPSTLPFRPIFLRCWEQMALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEEKGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV

Homology

[Close]

BLAST of CmaCh11G009370 vs. ExPASy Swiss-Prot
Match: Q9FFE0 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g16450 PE=1 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.6e-78
Identity = 138/166 (83.13%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 56  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 115
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN L+R+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 116 KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 175
           KG GRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 176 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 222
           HP+KA+KK +GE+ VP+ + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CmaCh11G009370 vs. ExPASy Swiss-Prot
Match: Q9M8R9 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=At3g02770 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.9e-76
Identity = 135/166 (81.33%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 56  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 115
           MA VTTAEVCDAN ++I SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN L+R FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 116 KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 175
           KG GRVLVVDGGGS RCAILGGNPVVQAQNNGWAGI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 176 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 222
           HP+KA+KK +GE+ V + + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CmaCh11G009370 vs. ExPASy Swiss-Prot
Match: Q9FH13 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g56260 PE=1 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.9e-65
Identity = 118/166 (71.08%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 56  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 115
           MA   TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVLVR  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 116 KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 175
           KG+G VLV+DGGGS RCA++GGN    AQNNGW+GIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 176 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 222
           +P+K+ KK  GEK+VP+ +GGT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]

BLAST of CmaCh11G009370 vs. ExPASy Swiss-Prot
Match: Q46ZV6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=Reut_A1963 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-49
Identity = 86/159 (54.09%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 61  TAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEEKGKGR 120
           T ++CDAN   +  G LR + P+F+ +G++Q F+GP  TLK+FEDN LVRE LE  G+GR
Sbjct: 5   TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64

Query: 121 VLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKA 180
           VLVVDGGGS RCA++GGN  + A+ NGW GI+VNGCVRD  E++ CDIG+RALA+HP K+
Sbjct: 65  VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124

Query: 181 NKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTEL 220
            K+  GE+ V + + G  +  G W+Y D DG+LVS  +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163

[Close]

BLAST of CmaCh11G009370 vs. ExPASy Swiss-Prot
Match: A9AHQ6 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=Bmul_1223 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.3e-49
Identity = 92/160 (57.50%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 61  TAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEEKGKGR 120
           T ++CDA+   + +G LR L+P  + YG    F+GP  TLKVFEDN LVR  LE+ G GR
Sbjct: 5   TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGGR 64

Query: 121 VLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKA 180
           VLVVDGG S RCA++GGN    A+ NGWAGIVV+GCVRD  E+  C +GV ALA+HP K+
Sbjct: 65  VLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKS 124

Query: 181 NKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELS 221
           +K+  GE+ VP+TV GTRI  GEW+YAD DG+LVS T L+
Sbjct: 125 DKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164

[Close]

BLAST of CmaCh11G009370 vs. TAIR 10
Match: AT5G16450.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-79
Identity = 138/166 (83.13%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 56  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 115
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN L+R+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 116 KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 175
           KG GRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 176 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 222
           HP+KA+KK +GE+ VP+ + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CmaCh11G009370 vs. TAIR 10
Match: AT5G16450.2 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-79
Identity = 138/166 (83.13%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 56  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 115
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN L+R+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 116 KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 175
           KG GRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 176 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 222
           HP+KA+KK +GE+ VP+ + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CmaCh11G009370 vs. TAIR 10
Match: AT3G02770.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77
Identity = 135/166 (81.33%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 56  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 115
           MA VTTAEVCDAN ++I SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN L+R FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 116 KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 175
           KG GRVLVVDGGGS RCAILGGNPVVQAQNNGWAGI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 176 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 222
           HP+KA+KK +GE+ V + + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of CmaCh11G009370 vs. TAIR 10
Match: AT5G56260.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase )

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-66
Identity = 118/166 (71.08%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 56  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 115
           MA   TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVLVR  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 116 KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 175
           KG+G VLV+DGGGS RCA++GGN    AQNNGW+GIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 176 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 222
           +P+K+ KK  GEK+VP+ +GGT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

The following BLAST results are available for this feature:

BLAST of CmaCh11G009370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFE0	2.6e-78	83.13	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX...	[more]
Q9M8R9	1.9e-76	81.33	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX...	[more]
Q9FH13	1.9e-65	71.08	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX...	[more]
Q46ZV6	1.5e-49	54.09	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensi...	[more]
A9AHQ6	4.3e-49	57.50	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans ...	[more]

BLAST of CmaCh11G009370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16450.1	1.8e-79	83.13	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G16450.2	1.8e-79	83.13	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT3G02770.1	1.3e-77	81.33	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G56260.1	1.4e-66	71.08	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.50.30.40		coord: 58..221 e-value: 9.6E-49 score: 167.2
None	No IPR available	PANTHER	PTHR33254	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED	coord: 59..221
None	No IPR available	PANTHER	PTHR33254:SF20	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE	coord: 59..221
IPR010203	Regulator of ribonuclease activity A	TIGRFAM	TIGR01935	TIGR01935	coord: 61..215 e-value: 1.1E-64 score: 214.8
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	PFAM	PF03737	RraA-like	coord: 61..214 e-value: 2.2E-42 score: 144.7
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	CDD	cd16841	RraA_family	coord: 62..215 e-value: 5.25512E-58 score: 178.422
IPR036704	Ribonuclease E inhibitor RraA/RraA-like superfamily	SUPERFAMILY	89562	RraA-like	coord: 59..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G009370.1	CmaCh11G009370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0051252	regulation of RNA metabolic process
molecular_function	GO:0047443	4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008948	oxaloacetate decarboxylase activity
molecular_function	GO:0008428	ribonuclease inhibitor activity