CmaCh11G009190 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCCCTAATCAAAGAAGGGTATGAAAGTCTTTTCACATCCATCCCATCCTCAACCACAACCCACGTTTTTTAAATGACTAAAACACCCCCAACACTTGCCGTAGCTCTCCAAACTCAAAGGGTAAATTAGTAAACCTCCTCCTCCCTCGACGTCTTGCTCCGCAGCATCAGGTCACCCTCTCCTCCGCCATTTCTGGAACCTTTTTGCGGTCTCTCTCCCTCTCTCTCTCTCCAATGGCTTTGCGTCTCCCTCTCACTCCGCCGTCGATCAGGCCCTCGACGTCGTTGCCTTGCAACGGAAAGCATCCGATTGCTTCTCTTTCGGACTCGAAGAGCGGCTGCTTCAGTTCAAAGAGCTTGAATGTTACTAGTCGGAGGAGCATTGGTGTTTCCGGTGGAAATCGCTCCTTCAAGGTCAATTCTAGCTTAGATATTGCTGGAGCTACCGTCGGCCAGGTCACCGAGGTCAACAAGGACACTTTCTGGCCCATCGTCAATGCTGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTTTGTGCTTCTGTGTATCCTTAAGCCTATACTTCTTTTTGTGGATTCTGTACTTACTATATGAGATTGTTGAGGAATTATGGCTGCCATGATCTTGTATTTGTATGTCATTTCTGGTTTTCTGATTTTCTGATCTTGAATGGAAATTAGTCAAGGTAGGCGATGCTTAGTTGTGGAGTTTAGATCTCCTAGTTTTAGGAAATTGAAGGGAAACTTTGGTGTTTCTTAGGCGTCTGTTTGACAAATGTTTCTGAAATTTATATAAATAATCCCTGCAATGAGTTTGACCTAGATTAAAAAATTAAGAATCAGAGGATGACGGGTTTTCCCCCTTCTTTTGAAGCAATAATTAGGTCTACAAAACTGGTTTTAGTTTTGTTTTGTGGAATTTTGAGCTCACATCTCTGACTAGACTAGATTAAGCTTAATAGCTTGAATTTTTAGGATAATACTAAGATAAATTATTGAGGAGGTTGGTGGTTCTACATTGAGTTATTTTTGCAATCTAAGACCATGTTGGAACAATTTATAATTCAGACAAGTTCTAAGGCAATTCATAATGGGTATTCTTGTGTGAGATCTCACCTTGATTGAAGAGTAGAACGAAACATTCTTTATAAAGGTGTGGAAACCTTCTCTAGCCTATACATTTTAACAACCTTGAAGGGAAGCTTGAAAAGGAAAGCCCAACGATAATAAATAGTTGTGAACGGTGGACTTGAACTGTTACAAATGGTATTAGAGCTAGACATTGGGCGATGTGCCAGCGAGGAGGCTAAGTCCTGGAGGGAGGTGGATACAAGGCGGTGTGCCAGCAAGGACGCTGGCCCTCAAAGGAGGGTGGATTGAGAGGTCCCACATCGATTTGAAAAGGGAACAACTGCCAGCGAGGATGCTGGGCCTCGAAGGGGGGTGGAGTGTGAGATCCCACATTGGTTGGGGAGAAGAACGAAACATTTTTTTGCAAGGGTGTGGAAACCTCTCCCTAGCGGATGCCTTTTAAAACTTTAAGGAAAAACCTGAAAGTGAAAACCCAAACCCAAACCCAAAGAGGACAATATCGGTTAATGGTAGACTTGGGCGGTTACATTTTGCTAATTGGTAGTTAAATTAAATTTTTGCAAAGTTGTCAGAGTCAAGCTAATAAACTCATCTTCCATGTCCAGACATGTATTTGTATATTCAATGATCCTGTATAACTAAAATAGATATTAGCTGCTTGATTGGTTGTTTCCTTTCCAATAACTTGACATATTTTGGAGGTAACGTTCTCTGTTTTAGGTGAGATTCTATTTGGTGATGGTGCGCTTCTAATGGTGATATGGCTTCTGTTTAACTCTGAAGTAGTTTATCGATCTGTGAATTTTGGGAAAGAAAACTTGAAAAAGAATGAGGAAATGGATTCCTAGAAACACCACCTAACACAGCTTGTTTATTGTAATTGAAGCATGCCCTGCCTATATGTTGTGACCTCTTGGATCTTGCTGATCTTTCCTTAATATCATTATGCATAAATTTGTTAACTAAAAACCCCCTTCTCCAGTGAAGTTTCGTTGCTCTACATTTTGCAGATATGGAAATGGATAGGTAGAAATTAGAAACTTTTCCTGGTATTGAAGTTTTTCTGTGCAATTTCAGGCTCCTTGCAACCTCAATCTTCTATGAAGTTTTAGATTCATGTGTATTGTCATTGTTTTTGGATCCCCAAGCTTAACCTCTTCATTAACTTTCTATCATCCTTAAATACTACATTGAAGGTGTGGACCCTGCAAAGTGATGGCTCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTATCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGGTTGGTTCCATGATCCCTACTTTCTTGGAAGAACACTTCAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATGGTGATTTATTTGGCAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCGACATTCAAAATTCTAAAGAATAAAATGGTAGTGAAAGAAGTAACTGGAGCAAAGTATGATGATTTGGTTCATGCCATTGATGCTGTAAGAACCAGCTGAAGACTCTCCTCTTTCTAGGTTTATATATTGCAAGGAAGAGAGAGTATCCACAACTGTTATTTATTTGACTCTCTTAATTTAATGATTTTGTGTACTGTTAAGTCAGTCCTAGTGAAGAAGAAGCAATTCAACAATATTCTTATTCTTCTTCCTGCAAAGATAGTTTGGGAAATGGTTCTGTATATAGATGTTTGGGGCAGGGATGTTTGAATATGGGCAATGACAGTACACACTTGCTTTTACATGCTTTCTTTTTCTTTAAACATTTGATGGATTCATATTCCCAATGGATTATAGTTATGCATCTCCC AACCCCTAATCAAAGAAGGGTATGAAAGTCTTTTCACATCCATCCCATCCTCAACCACAACCCACGTTTTTTAAATGACTAAAACACCCCCAACACTTGCCGTAGCTCTCCAAACTCAAAGGGTAAATTAGTAAACCTCCTCCTCCCTCGACGTCTTGCTCCGCAGCATCAGGTCACCCTCTCCTCCGCCATTTCTGGAACCTTTTTGCGGTCTCTCTCCCTCTCTCTCTCTCCAATGGCTTTGCGTCTCCCTCTCACTCCGCCGTCGATCAGGCCCTCGACGTCGTTGCCTTGCAACGGAAAGCATCCGATTGCTTCTCTTTCGGACTCGAAGAGCGGCTGCTTCAGTTCAAAGAGCTTGAATGTTACTAGTCGGAGGAGCATTGGTGTTTCCGGTGGAAATCGCTCCTTCAAGGTCAATTCTAGCTTAGATATTGCTGGAGCTACCGTCGGCCAGGTCACCGAGGTCAACAAGGACACTTTCTGGCCCATCGTCAATGCTGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCTCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTATCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCGACATTCAAAATTCTAAAGAATAAAATGGTAGTGAAAGAAGTAACTGGAGCAAAGTATGATGATTTGGTTCATGCCATTGATGCTGTAAGAACCAGCTGAAGACTCTCCTCTTTCTAGGTTTATATATTGCAAGGAAGAGAGAGTATCCACAACTGTTATTTATTTGACTCTCTTAATTTAATGATTTTGTGTACTGTTAAGTCAGTCCTAGTGAAGAAGAAGCAATTCAACAATATTCTTATTCTTCTTCCTGCAAAGATAGTTTGGGAAATGGTTCTGTATATAGATGTTTGGGGCAGGGATGTTTGAATATGGGCAATGACAGTACACACTTGCTTTTACATGCTTTCTTTTTCTTTAAACATTTGATGGATTCATATTCCCAATGGATTATAGTTATGCATCTCCC ATGGCTTTGCGTCTCCCTCTCACTCCGCCGTCGATCAGGCCCTCGACGTCGTTGCCTTGCAACGGAAAGCATCCGATTGCTTCTCTTTCGGACTCGAAGAGCGGCTGCTTCAGTTCAAAGAGCTTGAATGTTACTAGTCGGAGGAGCATTGGTGTTTCCGGTGGAAATCGCTCCTTCAAGGTCAATTCTAGCTTAGATATTGCTGGAGCTACCGTCGGCCAGGTCACCGAGGTCAACAAGGACACTTTCTGGCCCATCGTCAATGCTGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCTCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTATCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCGACATTCAAAATTCTAAAGAATAAAATGGTAGTGAAAGAAGTAACTGGAGCAAAGTATGATGATTTGGTTCATGCCATTGATGCTGTAAGAACCAGCTGA MALRLPLTPPSIRPSTSLPCNGKHPIASLSDSKSGCFSSKSLNVTSRRSIGVSGGNRSFKVNSSLDIAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYLDVIFLKLDCNQDNKPLAKELGIKVVPTFKILKNKMVVKEVTGAKYDDLVHAIDAVRTS Homology
BLAST of CmaCh11G009190 vs. ExPASy Swiss-Prot
Match: P29450 (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.8e-51 Identity = 117/190 (61.58%), Postives = 137/190 (72.11%), Query Frame = 0
BLAST of CmaCh11G009190 vs. ExPASy Swiss-Prot
Match: Q9XFH9 (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 5.4e-50 Identity = 113/188 (60.11%), Postives = 132/188 (70.21%), Query Frame = 0
BLAST of CmaCh11G009190 vs. ExPASy Swiss-Prot
Match: O48897 (Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.5e-47 Identity = 107/187 (57.22%), Postives = 130/187 (69.52%), Query Frame = 0
BLAST of CmaCh11G009190 vs. ExPASy Swiss-Prot
Match: Q9XFH8 (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2) HSP 1 Score: 185.7 bits (470), Expect = 4.8e-46 Identity = 101/183 (55.19%), Postives = 124/183 (67.76%), Query Frame = 0
BLAST of CmaCh11G009190 vs. ExPASy Swiss-Prot
Match: P09856 (Thioredoxin F-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2) HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45 Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of CmaCh11G009190 vs. TAIR 10
Match: AT5G16400.1 (thioredoxin F2 ) HSP 1 Score: 198.7 bits (504), Expect = 3.9e-51 Identity = 113/188 (60.11%), Postives = 132/188 (70.21%), Query Frame = 0
BLAST of CmaCh11G009190 vs. TAIR 10
Match: AT3G02730.1 (thioredoxin F-type 1 ) HSP 1 Score: 185.7 bits (470), Expect = 3.4e-47 Identity = 101/183 (55.19%), Postives = 124/183 (67.76%), Query Frame = 0
BLAST of CmaCh11G009190 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-12 Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of CmaCh11G009190 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 ) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11 Identity = 29/87 (33.33%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of CmaCh11G009190 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein ) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11 Identity = 35/105 (33.33%), Postives = 61/105 (58.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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