CmaCh11G009070 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G009070
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein FAF-like, chloroplastic
Location	Cma_Chr11: 4665732 .. 4667331 (-)
RNA-Seq Expression	CmaCh11G009070
Synteny	CmaCh11G009070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAATTCCCCTGCTTCCCTTCTCTGCAACTCTGCAGCTTCAGCGGTCTCTTTCTTCCGACCGCTGCCGGTTGCTGTAGTTGCTCTTCTAGAAACACTCACAAAAAACCCAACAAGACAAAACCAAATCATGTCGCCATTGAAGATCTTTCAAGCTTCCTGCGACGACAAAAAACAGGGCATCGTCGCTGTTCTGTCCTCCGACCCCGACCGCTCCAAATCCCAACCTTCTTCTCTCCGAAGAACACTCTCTGCTGACATGTCGTCCCATAAATGGATTTCCCAAATGAAAAATGTCGCTTCTTGTCAAGAATTTGGTCTCTGGGATTCAATTCAAGAAAGGGAGAAAAAGAAGAAGAAAACAGAGGAGGATAAAACAGAGGATAAAACAGACTCTGCTGATATTTGGGGCTCTGTCATCAAATCTCGTAAGGATTTTAATGCTAATCCTTATGTTCCTCCCCGGCCAATGGGTAAGTGTTTAAGTGAGAAAAGCCTCGAGATTTGTACTGAAAGTCTTGGATCGGAAACCGGCTCTGATGGGTTCTCGTCGTATCCATCATCGGAGAACGGAGATTCCGACGAGGAGGAGTTTGAAGTAGAGGATCAAGGAAAGCCGGTGAAGTATAGCTATAAAAAATCACCCCCCCGCCGGTCGTTTCCTCCACCGTTGCCGACACTCTCCGGCCCGGATGGGGAGTTAGTACGGATGCAGCCCCGCCGTGACAACGGCCGGTTGGTCCTCGAGGCCATGTCCGTGCCTTCACAGAGCACCTTCTCCGCCCAACGTCAAGATGGCCGCCTCGTTCTCACCCTCGTTAATCGCAAGCCCATTAACGAGGTAAATCACTTAATTAGCAAGCTAATCTTGATCAAATGCTGCATCAATTATGTAAACAGTCAATAAAGTTTAATCCTTTTGTTCATATTCTTAATCCAGATCAAAGAAGAACAGAAAAAGATTGAAAATTCATCACAATTACCAAGTGGGTTACTAAAATCCCACAGATTAGCATCAATGATGAACAGCAAATCGAGAGTTTTAGCCAACAGGAACCCATCACTCCCCCCACGCCCAAAGGCGGCAGCAGCAGCAGCTCAACCAATAACCCCCTGCGCCGCCCCGCCTACCGCAGCGTCGTTGAATGCCTACGAGTACTACTGGAGATCGAAGCCGAGCTCGAAAGCGGGGGCGGCGGCTGTGAACCCGCTCGGGCAGCAGGCGGCGGCGTTCAAGAATAGCAACAGAAAAGTTATGATATGCAAGAACAGAGTAGTGAATGAAGAAGAGCAAATGTTCGTGATGTCTCCAAAAGGGAGTTGTAAGGAAGTCCGGCGGACGGCGGTGGTTTGGGAGCCACGGTGCATTGCCACATCGTAAGTAGTTGATGATATTCATTTGGCGAAGGCTGTAAGCTAACTGTTGTAGCTGGGTGTGAATTGGGTTCTTAATTTAGTGTTAACTTACCTTTCCACTCTTTGGGGAATTGTGTTGAAAAGAATAAAAAGGTGATGAAAGAGAAAGAGTGAGAGATTATTACTTTTTATTTGAGAGAAATATTTACCCTTCATGAAGTTGAATAATATATATAGTTAAATT

mRNA sequence

CTTCAATTCCCCTGCTTCCCTTCTCTGCAACTCTGCAGCTTCAGCGGTCTCTTTCTTCCGACCGCTGCCGGTTGCTGTAGTTGCTCTTCTAGAAACACTCACAAAAAACCCAACAAGACAAAACCAAATCATGTCGCCATTGAAGATCTTTCAAGCTTCCTGCGACGACAAAAAACAGGGCATCGTCGCTGTTCTGTCCTCCGACCCCGACCGCTCCAAATCCCAACCTTCTTCTCTCCGAAGAACACTCTCTGCTGACATGTCGTCCCATAAATGGATTTCCCAAATGAAAAATGTCGCTTCTTGTCAAGAATTTGGTCTCTGGGATTCAATTCAAGAAAGGGAGAAAAAGAAGAAGAAAACAGAGGAGGATAAAACAGAGGATAAAACAGACTCTGCTGATATTTGGGGCTCTGTCATCAAATCTCGTAAGGATTTTAATGCTAATCCTTATGTTCCTCCCCGGCCAATGGGTAAGTGTTTAAGTGAGAAAAGCCTCGAGATTTGTACTGAAAGTCTTGGATCGGAAACCGGCTCTGATGGGTTCTCGTCGTATCCATCATCGGAGAACGGAGATTCCGACGAGGAGGAGTTTGAAGTAGAGGATCAAGGAAAGCCGGTGAAGTATAGCTATAAAAAATCACCCCCCCGCCGGTCGTTTCCTCCACCGTTGCCGACACTCTCCGGCCCGGATGGGGAGTTAGTACGGATGCAGCCCCGCCGTGACAACGGCCGGTTGGTCCTCGAGGCCATGTCCGTGCCTTCACAGAGCACCTTCTCCGCCCAACGTCAAGATGGCCGCCTCGTTCTCACCCTCGTTAATCGCAAGCCCATTAACGAGATCAAAGAAGAACAGAAAAAGATTGAAAATTCATCACAATTACCAAGTGGGTTACTAAAATCCCACAGATTAGCATCAATGATGAACAGCAAATCGAGAGTTTTAGCCAACAGGAACCCATCACTCCCCCCACGCCCAAAGGCGGCAGCAGCAGCAGCTCAACCAATAACCCCCTGCGCCGCCCCGCCTACCGCAGCGTCGTTGAATGCCTACGAGTACTACTGGAGATCGAAGCCGAGCTCGAAAGCGGGGGCGGCGGCTGTGAACCCGCTCGGGCAGCAGGCGGCGGCGTTCAAGAATAGCAACAGAAAAGTTATGATATGCAAGAACAGAGTAGTGAATGAAGAAGAGCAAATGTTCGTGATGTCTCCAAAAGGGAGTTGTAAGGAAGTCCGGCGGACGGCGGTGGTTTGGGAGCCACGGTGCATTGCCACATCGTAAGTAGTTGATGATATTCATTTGGCGAAGGCTGTAAGCTAACTGTTGTAGCTGGGTGTGAATTGGGTTCTTAATTTAGTGTTAACTTACCTTTCCACTCTTTGGGGAATTGTGTTGAAAAGAATAAAAAGGTGATGAAAGAGAAAGAGTGAGAGATTATTACTTTTTATTTGAGAGAAATATTTACCCTTCATGAAGTTGAATAATATATATAGTTAAATT

Coding sequence (CDS)

ATGTCGCCATTGAAGATCTTTCAAGCTTCCTGCGACGACAAAAAACAGGGCATCGTCGCTGTTCTGTCCTCCGACCCCGACCGCTCCAAATCCCAACCTTCTTCTCTCCGAAGAACACTCTCTGCTGACATGTCGTCCCATAAATGGATTTCCCAAATGAAAAATGTCGCTTCTTGTCAAGAATTTGGTCTCTGGGATTCAATTCAAGAAAGGGAGAAAAAGAAGAAGAAAACAGAGGAGGATAAAACAGAGGATAAAACAGACTCTGCTGATATTTGGGGCTCTGTCATCAAATCTCGTAAGGATTTTAATGCTAATCCTTATGTTCCTCCCCGGCCAATGGGTAAGTGTTTAAGTGAGAAAAGCCTCGAGATTTGTACTGAAAGTCTTGGATCGGAAACCGGCTCTGATGGGTTCTCGTCGTATCCATCATCGGAGAACGGAGATTCCGACGAGGAGGAGTTTGAAGTAGAGGATCAAGGAAAGCCGGTGAAGTATAGCTATAAAAAATCACCCCCCCGCCGGTCGTTTCCTCCACCGTTGCCGACACTCTCCGGCCCGGATGGGGAGTTAGTACGGATGCAGCCCCGCCGTGACAACGGCCGGTTGGTCCTCGAGGCCATGTCCGTGCCTTCACAGAGCACCTTCTCCGCCCAACGTCAAGATGGCCGCCTCGTTCTCACCCTCGTTAATCGCAAGCCCATTAACGAGATCAAAGAAGAACAGAAAAAGATTGAAAATTCATCACAATTACCAAGTGGGTTACTAAAATCCCACAGATTAGCATCAATGATGAACAGCAAATCGAGAGTTTTAGCCAACAGGAACCCATCACTCCCCCCACGCCCAAAGGCGGCAGCAGCAGCAGCTCAACCAATAACCCCCTGCGCCGCCCCGCCTACCGCAGCGTCGTTGAATGCCTACGAGTACTACTGGAGATCGAAGCCGAGCTCGAAAGCGGGGGCGGCGGCTGTGAACCCGCTCGGGCAGCAGGCGGCGGCGTTCAAGAATAGCAACAGAAAAGTTATGATATGCAAGAACAGAGTAGTGAATGAAGAAGAGCAAATGTTCGTGATGTCTCCAAAAGGGAGTTGTAAGGAAGTCCGGCGGACGGCGGTGGTTTGGGAGCCACGGTGCATTGCCACATCGTAA

Protein sequence

MSPLKIFQASCDDKKQGIVAVLSSDPDRSKSQPSSLRRTLSADMSSHKWISQMKNVASCQEFGLWDSIQEREKKKKKTEEDKTEDKTDSADIWGSVIKSRKDFNANPYVPPRPMGKCLSEKSLEICTESLGSETGSDGFSSYPSSENGDSDEEEFEVEDQGKPVKYSYKKSPPRRSFPPPLPTLSGPDGELVRMQPRRDNGRLVLEAMSVPSQSTFSAQRQDGRLVLTLVNRKPINEIKEEQKKIENSSQLPSGLLKSHRLASMMNSKSRVLANRNPSLPPRPKAAAAAAQPITPCAAPPTAASLNAYEYYWRSKPSSKAGAAAVNPLGQQAAAFKNSNRKVMICKNRVVNEEEQMFVMSPKGSCKEVRRTAVVWEPRCIATS

Homology

[Close]

BLAST of CmaCh11G009070 vs. ExPASy Swiss-Prot
Match: Q0V865 (Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.8e-38
Identity = 156/475 (32.84%), Postives = 213/475 (44.84%), Query Frame = 0


Query: 14  KKQGIVAVLSSDPDRSKSQPSSLRRTLSADMSSHKWISQ-----MKNVASCQEF------ 73
           K+QGIV++L      + S P SLRRT SAD+SS  W+SQ     MK ++S ++       
Sbjct: 18  KQQGIVSILGGISSNTSSAP-SLRRTFSADLSSKTWVSQNGFSPMKRISSSEKLRPDEEE 77

Query: 74  ---------GLWDSIQEREKKKKKTEEDKTEDKTDSADIWGSVI------KSRKDFNANP 133
                     +W  IQ+ +  KKK E    E +   +D+W S++      +S KD    P
Sbjct: 78  AEEESRSGVDIWAQIQQDKNDKKKEE----EIEPGQSDVWSSILSEKKKTESSKDTVPPP 137

Query: 134 YVPP-RPMGKCLSEKSLEICTESLGSETGSDGFSSYPSSENGDSD--------------- 193
           YV P       LSEKSLEICTESLGSETG DGFSS+ SSE GD++               
Sbjct: 138 YVHPLMKRASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNVTE 197

Query: 194 -------EEEFEVEDQGKPVKYSYKKSPPRRSFPPPLPTLSGPDGELVRMQPRRDNGRLV 253
                  E E  VE +   +  ++    P  SFPPP+ +LS   G  + M+ RRDNGRLV
Sbjct: 198 TKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGRLV 257

Query: 254 LEAMSVPSQSTFSAQRQDGRLVLTL--VNRKP--------------INEIKEEQKKIENS 313
           LEA+S+PS + FSA+RQDGRL+LT   ++ +P               +E +EE+++ E+ 
Sbjct: 258 LEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWFDEEEEEEEEEEDE 317

Query: 314 SQ--------LPSGLLKS----------HRL----------------ASMMNSKSRVLAN 373
            +         P+GLL            HRL                A   ++KS +   
Sbjct: 318 EEEAPDEFAYKPNGLLYKMAQKPIPITVHRLAHKPIGVPKRNSRWPMADEFDTKSDLSTP 377

Query: 374 RNPSLPPRPKAAAAAAQPITPCAAPPT--AASLNAYEYYWRSKPSSKAGAAAVNPLGQQA 383
              SLPPRP+ A  A     P     T  AA  N  +Y W+S  +   G           
Sbjct: 378 VVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTNTESFG----------- 437

[Close]

BLAST of CmaCh11G009070 vs. ExPASy Swiss-Prot
Match: Q6NMR8 (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 9.3e-07
Identity = 66/231 (28.57%), Postives = 107/231 (46.32%), Query Frame = 0


Query: 24  SDPDRSKSQPSSLRRTLSADMSSHKWISQMKN-----VASCQEFGLWDSIQEREKKKKKT 83
           S P+   SQP  L        SSH   ++ +N      +   +   W S+Q        +
Sbjct: 25  SSPNPHFSQPFGLALKSHLLDSSHAEDTRNRNDDKAAASPVSDSSGWSSLQSLSSGSSSS 84

Query: 84  EEDKTEDKTDSADIWGSVIKSRKDFNANPYVPPRPMG-KCLSEKSLEICTESLGSETGSD 143
            +  T  + +S+                 Y   RP   + LS++SL +CTE+LGSE+GSD
Sbjct: 85  TKTTTSSEKESS-----------------YYVQRPSSCRALSDQSLALCTENLGSESGSD 144

Query: 144 GFSSYPSSENGDSDEEEFEVEDQGKPVKYSYKKSPPRRSFPPPLPTLSGPDGELVRMQPR 203
                         +   E   + + +K S K+S      PPPL T+ G   + ++M+P 
Sbjct: 145 VTDIDELFSLDVQTKNLGETTTETRTLK-SRKRSVSPSDLPPPLTTMRG--FQCIQMRPH 204

Query: 204 RDNGRLVLEAMSVPSQS-TFSAQRQDGRLVLTLVNRKPINE-IKEEQKKIE 247
           R+NGRLV+ A + P ++  F A R +GRL L+++  K  NE ++ E++ IE
Sbjct: 205 RENGRLVMTATNAPPRNGCFQADRSNGRLRLSIL--KDSNEFVENEEETIE 233

[Close]

BLAST of CmaCh11G009070 vs. ExPASy Swiss-Prot
Match: Q9SFG6 (Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana OX=3702 GN=FAF4 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.9e-05
Identity = 44/137 (32.12%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 116 KCLSEKSLEICTESLGSETGSDGFSSYPSSENGDSDEEEFEVEDQGKPVKYSYKKSPPRR 175
           + LS++SL +CTESLGSETGSD       S + +    E              +K     
Sbjct: 106 RTLSDESLALCTESLGSETGSDIIHEDMFSISSELQTMETRTTSTTSNPSRQDRKRNTMA 165

Query: 176 SFPPPLPTLSGPDGELVRMQPRRDNGRLVLEAMSVPSQSTFSAQRQDG--RLVLTLVNRK 235
           S PPPL ++ G D   + ++  R+NGRLV+ A   P ++     R +G  RL + + +  
Sbjct: 166 SLPPPLTSMIGFD--CIEVKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDD 225

Query: 236 PI-NEIKEEQKKIENSS 250
            I  E KEE+++ E  +
Sbjct: 226 HIETETKEEKEEEEEET 240

[Close]

BLAST of CmaCh11G009070 vs. ExPASy Swiss-Prot
Match: Q8GXU9 (Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana OX=3702 GN=FAF2 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 55/169 (32.54%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 95  SVIKSRKDFNANPYVPP---RPMGKCLSEKSLEICTESLGSETGSD-----GFSSYPSSE 154
           S+ ++++D     YV P   R + K L+EKSLE+CTESLG+ETGS+        ++ ++ 
Sbjct: 34  SIAQTKED---KAYVHPMEKRSVSK-LNEKSLEMCTESLGTETGSESGDELSLLAFEATT 93

Query: 155 NGDSDEEEFE-VEDQGKPVKYSYKKSPP---RRSFPPPLPTLSGPDGELVRM-QPRRDNG 214
              +   + +  ED   P      K+PP     SFPPP+  +   D +  RM +   ++G
Sbjct: 94  TPRAPPRQLKPQEDTNLP-----DKTPPMSRNNSFPPPIKFVE--DSKYNRMVRWLGEDG 153

Query: 215 RLVLEAMSVPS-QSTFSAQRQDGRLVLTLVNRKPI---NEIKEEQKKIE 247
           R+V++A+ V S  S F ++R +GRL L L +   +   N  +EE+++ E
Sbjct: 154 RIVVQAIRVSSPPSCFVSERGEGRLRLILTSESSLLSHNHEEEEEEETE 191

[Close]

BLAST of CmaCh11G009070 vs. TAIR 10
Match: AT5G22090.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 159.5 bits (402), Expect = 5.5e-39
Identity = 156/475 (32.84%), Postives = 213/475 (44.84%), Query Frame = 0


Query: 14  KKQGIVAVLSSDPDRSKSQPSSLRRTLSADMSSHKWISQ-----MKNVASCQEF------ 73
           K+QGIV++L      + S P SLRRT SAD+SS  W+SQ     MK ++S ++       
Sbjct: 18  KQQGIVSILGGISSNTSSAP-SLRRTFSADLSSKTWVSQNGFSPMKRISSSEKLRPDEEE 77

Query: 74  ---------GLWDSIQEREKKKKKTEEDKTEDKTDSADIWGSVI------KSRKDFNANP 133
                     +W  IQ+ +  KKK E    E +   +D+W S++      +S KD    P
Sbjct: 78  AEEESRSGVDIWAQIQQDKNDKKKEE----EIEPGQSDVWSSILSEKKKTESSKDTVPPP 137

Query: 134 YVPP-RPMGKCLSEKSLEICTESLGSETGSDGFSSYPSSENGDSD--------------- 193
           YV P       LSEKSLEICTESLGSETG DGFSS+ SSE GD++               
Sbjct: 138 YVHPLMKRASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNVTE 197

Query: 194 -------EEEFEVEDQGKPVKYSYKKSPPRRSFPPPLPTLSGPDGELVRMQPRRDNGRLV 253
                  E E  VE +   +  ++    P  SFPPP+ +LS   G  + M+ RRDNGRLV
Sbjct: 198 TKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGRLV 257

Query: 254 LEAMSVPSQSTFSAQRQDGRLVLTL--VNRKP--------------INEIKEEQKKIENS 313
           LEA+S+PS + FSA+RQDGRL+LT   ++ +P               +E +EE+++ E+ 
Sbjct: 258 LEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWFDEEEEEEEEEEDE 317

Query: 314 SQ--------LPSGLLKS----------HRL----------------ASMMNSKSRVLAN 373
            +         P+GLL            HRL                A   ++KS +   
Sbjct: 318 EEEAPDEFAYKPNGLLYKMAQKPIPITVHRLAHKPIGVPKRNSRWPMADEFDTKSDLSTP 377

Query: 374 RNPSLPPRPKAAAAAAQPITPCAAPPT--AASLNAYEYYWRSKPSSKAGAAAVNPLGQQA 383
              SLPPRP+ A  A     P     T  AA  N  +Y W+S  +   G           
Sbjct: 378 VVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTNTESFG----------- 437

[Close]

BLAST of CmaCh11G009070 vs. TAIR 10
Match: AT5G22090.2 (Protein of unknown function (DUF3049) )

HSP 1 Score: 159.5 bits (402), Expect = 5.5e-39
Identity = 156/475 (32.84%), Postives = 213/475 (44.84%), Query Frame = 0


Query: 14  KKQGIVAVLSSDPDRSKSQPSSLRRTLSADMSSHKWISQ-----MKNVASCQEF------ 73
           K+QGIV++L      + S P SLRRT SAD+SS  W+SQ     MK ++S ++       
Sbjct: 18  KQQGIVSILGGISSNTSSAP-SLRRTFSADLSSKTWVSQNGFSPMKRISSSEKLRPDEEE 77

Query: 74  ---------GLWDSIQEREKKKKKTEEDKTEDKTDSADIWGSVI------KSRKDFNANP 133
                     +W  IQ+ +  KKK E    E +   +D+W S++      +S KD    P
Sbjct: 78  AEEESRSGVDIWAQIQQDKNDKKKEE----EIEPGQSDVWSSILSEKKKTESSKDTVPPP 137

Query: 134 YVPP-RPMGKCLSEKSLEICTESLGSETGSDGFSSYPSSENGDSD--------------- 193
           YV P       LSEKSLEICTESLGSETG DGFSS+ SSE GD++               
Sbjct: 138 YVHPLMKRASSLSEKSLEICTESLGSETGCDGFSSHASSETGDAEIEIHDETNLVVNVTE 197

Query: 194 -------EEEFEVEDQGKPVKYSYKKSPPRRSFPPPLPTLSGPDGELVRMQPRRDNGRLV 253
                  E E  VE +   +  ++    P  SFPPP+ +LS   G  + M+ RRDNGRLV
Sbjct: 198 TKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPPIRSLSSQSGSSLHMKTRRDNGRLV 257

Query: 254 LEAMSVPSQSTFSAQRQDGRLVLTL--VNRKP--------------INEIKEEQKKIENS 313
           LEA+S+PS + FSA+RQDGRL+LT   ++ +P               +E +EE+++ E+ 
Sbjct: 258 LEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDKEDEIDSEVQWFDEEEEEEEEEEDE 317

Query: 314 SQ--------LPSGLLKS----------HRL----------------ASMMNSKSRVLAN 373
            +         P+GLL            HRL                A   ++KS +   
Sbjct: 318 EEEAPDEFAYKPNGLLYKMAQKPIPITVHRLAHKPIGVPKRNSRWPMADEFDTKSDLSTP 377

Query: 374 RNPSLPPRPKAAAAAAQPITPCAAPPT--AASLNAYEYYWRSKPSSKAGAAAVNPLGQQA 383
              SLPPRP+ A  A     P     T  AA  N  +Y W+S  +   G           
Sbjct: 378 VVHSLPPRPRVAQLARSTKPPSTVDDTVGAACFNTCDYSWKSTNTESFG----------- 437

[Close]

BLAST of CmaCh11G009070 vs. TAIR 10
Match: AT5G19260.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 56.2 bits (134), Expect = 6.6e-08
Identity = 66/231 (28.57%), Postives = 107/231 (46.32%), Query Frame = 0


Query: 24  SDPDRSKSQPSSLRRTLSADMSSHKWISQMKN-----VASCQEFGLWDSIQEREKKKKKT 83
           S P+   SQP  L        SSH   ++ +N      +   +   W S+Q        +
Sbjct: 25  SSPNPHFSQPFGLALKSHLLDSSHAEDTRNRNDDKAAASPVSDSSGWSSLQSLSSGSSSS 84

Query: 84  EEDKTEDKTDSADIWGSVIKSRKDFNANPYVPPRPMG-KCLSEKSLEICTESLGSETGSD 143
            +  T  + +S+                 Y   RP   + LS++SL +CTE+LGSE+GSD
Sbjct: 85  TKTTTSSEKESS-----------------YYVQRPSSCRALSDQSLALCTENLGSESGSD 144

Query: 144 GFSSYPSSENGDSDEEEFEVEDQGKPVKYSYKKSPPRRSFPPPLPTLSGPDGELVRMQPR 203
                         +   E   + + +K S K+S      PPPL T+ G   + ++M+P 
Sbjct: 145 VTDIDELFSLDVQTKNLGETTTETRTLK-SRKRSVSPSDLPPPLTTMRG--FQCIQMRPH 204

Query: 204 RDNGRLVLEAMSVPSQS-TFSAQRQDGRLVLTLVNRKPINE-IKEEQKKIE 247
           R+NGRLV+ A + P ++  F A R +GRL L+++  K  NE ++ E++ IE
Sbjct: 205 RENGRLVMTATNAPPRNGCFQADRSNGRLRLSIL--KDSNEFVENEEETIE 233

[Close]

BLAST of CmaCh11G009070 vs. TAIR 10
Match: AT5G22390.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 54.7 bits (130), Expect = 1.9e-07
Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 122 SLEICTESLGSETGSDGFSSYPSSENGDSDEEEFEV--EDQGKPVKYSYK-KSPPRRSFP 181
           SL++CTE LGSE+   G      + +GD D++E EV  +D G   +  ++ +   R+ +P
Sbjct: 78  SLQLCTEGLGSES-YYGLEDEKVNGDGDGDDDEIEVKGKDNGSNDEEEWEPRRKERKEYP 137

Query: 182 PPLPTLSGPDGELVRMQPRRDNGRLVLEAMSVPSQSTFSAQRQDGRLVLTLVNRKPINEI 241
           P +  +S         +  R  GRLVLE + +P +    A R+DGRL L LV  +  ++ 
Sbjct: 138 PAMTRMS--------FKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQPEDDHDE 194

Query: 242 KEEQKK 245
           +EE +K
Sbjct: 198 EEENEK 194

[Close]

BLAST of CmaCh11G009070 vs. TAIR 10
Match: AT3G06020.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-06
Identity = 44/137 (32.12%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 116 KCLSEKSLEICTESLGSETGSDGFSSYPSSENGDSDEEEFEVEDQGKPVKYSYKKSPPRR 175
           + LS++SL +CTESLGSETGSD       S + +    E              +K     
Sbjct: 106 RTLSDESLALCTESLGSETGSDIIHEDMFSISSELQTMETRTTSTTSNPSRQDRKRNTMA 165

Query: 176 SFPPPLPTLSGPDGELVRMQPRRDNGRLVLEAMSVPSQSTFSAQRQDG--RLVLTLVNRK 235
           S PPPL ++ G D   + ++  R+NGRLV+ A   P ++     R +G  RL + + +  
Sbjct: 166 SLPPPLTSMIGFD--CIEVKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDD 225

Query: 236 PI-NEIKEEQKKIENSS 250
            I  E KEE+++ E  +
Sbjct: 226 HIETETKEEKEEEEEET 240

The following BLAST results are available for this feature:

BLAST of CmaCh11G009070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0V865	7.8e-38	32.84	Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=...	[more]
Q6NMR8	9.3e-07	28.57	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1	[more]
Q9SFG6	3.9e-05	32.12	Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana OX=3702 GN=FAF4 PE=2 SV=1	[more]
Q8GXU9	1.1e-04	32.54	Protein FANTASTIC FOUR 2 OS=Arabidopsis thaliana OX=3702 GN=FAF2 PE=2 SV=1	[more]

BLAST of CmaCh11G009070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22090.1	5.5e-39	32.84	Protein of unknown function (DUF3049)	[more]
AT5G22090.2	5.5e-39	32.84	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	6.6e-08	28.57	Protein of unknown function (DUF3049)	[more]
AT5G22390.1	1.9e-07	33.33	Protein of unknown function (DUF3049)	[more]
AT3G06020.1	2.8e-06	32.12	Protein of unknown function (DUF3049)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 176..229 e-value: 3.7E-18 score: 65.5
IPR021410	The fantastic four family	PANTHER	PTHR33155	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	coord: 248..382
IPR021410	The fantastic four family	PANTHER	PTHR33155	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	coord: 9..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..43
None	No IPR available	PANTHER	PTHR33155:SF3	PROTEIN FAF-LIKE, CHLOROPLASTIC	coord: 9..244 coord: 248..382

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G009070.1	CmaCh11G009070.1	mRNA