CmaCh11G008940 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G008940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionfasciclin-like arabinogalactan protein 17
LocationCma_Chr11: 4575497 .. 4578080 (+)
RNA-Seq ExpressionCmaCh11G008940
SyntenyCmaCh11G008940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAGAAAAAGGCTTTGTAAAAGAATTGCTCTCACGAGCTAAAACAGTGGCTGTACATTCGCGCTCTGGAAGGAAGCTTTTCCATTTTTCTTTGCCGGCCGCCATGGATTCCGCTGTCTCCGCTGCCGTCAAGCTCTCCTTCATCGTCTCTTCTCTCCTTCTTTCCTTTCACATTTCCTCTGCCGCGCCGGAATATTCGAAGCCTCGGTTGTCGTCTACTTCCTCTAATTCCTCCGGCCAGATTAACTCCAACTCGGTCCTCGTCGCTCTACTGGACTCGCATTACACGGAGCTTGCAGAGCTAATCGAGAAGGCTCTTCTGTTGCAGATTCTTGAAGATGCTGTTGGAAATCATAATCTCACCATTTTCGCGCCGCGAAACGAAGCTCTGGAGCGCGATCTTGACCCCGAGTTCAAGCGGTTTCTTCTCGAGCCGCGTAATTTGAAGTCGCTTCAGACGCTGTTGACGTTTCATGTCATTCCGACTCGGATTGGATTGGGCGAGTGGCCGACTCACAATGAGACGACTCGCCATCAGACGCTGTCAAATCATGTCCTCCGATTGACGAGCCACCGCACGGGTGAACGAACCGTCGATCTTGCCAAGGTCATTCAACCCGACGCCATTACTCGGCCCGACGGTGTCATCCACGGGATCGAACGGCTTCTCATTCCTCAGTCTGTACAAGATGATTTCAACCGCCGACGTAATCTCCTGGCTATAACTGCTGTGAAACCGGAAGGAGCGCCGGAAGTCGATCCGAGGACTCACCGCTTGAAGAAACCGGCTCCACCGGCCGAGCCGGGGTCTCCCCCGGCACTCCCAATCTACGACGCAATGGCTCCAGGACCGTCGTTGGCTCCGGCTCCGGCGCCTGGACCTGGCGGACCTCACCACCACTTCAACGGGGAACGCCAAGTAAAAGATTTCATTCACACTCTTCTTCACTACGGTGGTTACAACGAAATGGCGGACATATTAGTGAATCTAACGTCCTTAGCCATGGAAATGGGGAGGTTAGTTTCAGAAGGCTATGTATTAACCGTTTTGGCGCCGAACGACGAAGCGATGGCGAAACTTACTACAGACCAACTGAGCGAGCCTGGAGCACCGGAGCAAATCATGTACTACCATTTGATTCCGGAGTATCAGACGGAAGAGAGTATGTACAATGCCGTTCGCCGATTTGGAAAAGTCCGATACGACACCTTGAGACTGCCGCATAAGGTAGTTGCGCAAGAGGCCGACGGTTCGGTCAAGTTCGGTCAGGGAGATGGCTCAGCGTATTTGTTCGACCCTGACATTTACACCGACGGCCGTATCTCAGTGCAGGGGATCGACGGGGTTCTATTTCCGCCGGAGGAGACGGAGGCGAAATTGTCGGCAAAAACAGTTCAACACGTGAAAGTAGTTGCCAAGCCAAGGAGAGGTACATGACAGTTAAATTTCAGCATCGTTTCGTTTTACAATTCAATTTCCATGAATCAATTGCTCTGTTCGACTTTGATTTGTTAGTGTAGCGTCGGTTTTCACGCCGGTTTTTAGGTCTAGTTGTCTAGTTCCGGTGGCCGTCTTCAACGGCGGATTGATTAGGGATTTTCCTGATAGATAAAAAATAATAATAATAAATAACTAAAAGTGGAAGCAATTGCTTGGGATGTGGGGATTTGGTGGCAAAGTTGATGCGTTGAAATGGCCCTATTCTGAAACTGATTTTCTGGTTGAAGTTTACTTCTAAAGAAAGTGACTGAGTTTCTTCAATGGTGTTGCTTGGAATCTGTATAATCTGATGGAAACAAAAATTCGAAGTAAAATCTTAGTTAGGGTTTCTTGAAGGGAAGAGGAAGAAGTAGCTTGACTTTAAGACCTTGTGGCCATAAACTATCACTTGGATCTTCTGTTTAGTATTGATCATTGGATTTTCTTTACAACTATGCATGTGGGTTTTGTTTGTCTTGATGCAAATTGGATTGAACATGATTAGAATTATCAATGGTGTGGCTGTTGAGTTATCAAAATCCCAAATGAGTAGAAAAATAATTAAGAGTAGTCTTCCTCTTAGAAACTGAAAAGGTAAGAAATGAACAGGAAAAAAGTGAAGTATGAGGAACAAACAAAATAAATAATTTGGTTGGTGAACTCGGAATATCTTATGGGGTTTTAAGAAATGGGACCCTTTTGAAGAGAAAACCATTGAAACAGCAGCTGTGGTAGAGAGAAAGAGCTCCTGTGCTTTCCCCATTAGCTACCCTTCATATATTCCTCTTTACCTAACTGTTCTTATTTATTTTGATCTATAAACATTCAATGAATTTTGTATAAAGATTCATTTGATTCATTGTGATTGATTTTCAACAAATCATTGAGCTTCTTGACATGACACACATCTGTTTTTTCATACGATGTTTATAACCAAACAAAACAATCGAGAATTAAAGAATTTAGAAGTGTTGAATTTCAGATGCTGTGAATAGAATTAAAAAATTTCTTTTGTTATTACAATGGCAGGGAAATTGCTTGAAGTGGCTTGTCGGATGCTAGGAGCCTTTGGCCAGGATTCTCATTTCACAACTTGTCAATGA

mRNA sequence

TAAAAGAAAAAGGCTTTGTAAAAGAATTGCTCTCACGAGCTAAAACAGTGGCTGTACATTCGCGCTCTGGAAGGAAGCTTTTCCATTTTTCTTTGCCGGCCGCCATGGATTCCGCTGTCTCCGCTGCCGTCAAGCTCTCCTTCATCGTCTCTTCTCTCCTTCTTTCCTTTCACATTTCCTCTGCCGCGCCGGAATATTCGAAGCCTCGGTTGTCGTCTACTTCCTCTAATTCCTCCGGCCAGATTAACTCCAACTCGGTCCTCGTCGCTCTACTGGACTCGCATTACACGGAGCTTGCAGAGCTAATCGAGAAGGCTCTTCTGTTGCAGATTCTTGAAGATGCTGTTGGAAATCATAATCTCACCATTTTCGCGCCGCGAAACGAAGCTCTGGAGCGCGATCTTGACCCCGAGTTCAAGCGGTTTCTTCTCGAGCCGCGTAATTTGAAGTCGCTTCAGACGCTGTTGACGTTTCATGTCATTCCGACTCGGATTGGATTGGGCGAGTGGCCGACTCACAATGAGACGACTCGCCATCAGACGCTGTCAAATCATGTCCTCCGATTGACGAGCCACCGCACGGGTGAACGAACCGTCGATCTTGCCAAGGTCATTCAACCCGACGCCATTACTCGGCCCGACGGTGTCATCCACGGGATCGAACGGCTTCTCATTCCTCAGTCTGTACAAGATGATTTCAACCGCCGACGTAATCTCCTGGCTATAACTGCTGTGAAACCGGAAGGAGCGCCGGAAGTCGATCCGAGGACTCACCGCTTGAAGAAACCGGCTCCACCGGCCGAGCCGGGGTCTCCCCCGGCACTCCCAATCTACGACGCAATGGCTCCAGGACCGTCGTTGGCTCCGGCTCCGGCGCCTGGACCTGGCGGACCTCACCACCACTTCAACGGGGAACGCCAAGTAAAAGATTTCATTCACACTCTTCTTCACTACGGTGGTTACAACGAAATGGCGGACATATTAGTGAATCTAACGTCCTTAGCCATGGAAATGGGGAGGTTAGTTTCAGAAGGCTATGTATTAACCGTTTTGGCGCCGAACGACGAAGCGATGGCGAAACTTACTACAGACCAACTGAGCGAGCCTGGAGCACCGGAGCAAATCATGTACTACCATTTGATTCCGGAGTATCAGACGGAAGAGAGTATGTACAATGCCGTTCGCCGATTTGGAAAAGTCCGATACGACACCTTGAGACTGCCGCATAAGGTAGTTGCGCAAGAGGCCGACGGTTCGGTCAAGTTCGGTCAGGGAGATGGCTCAGCGTATTTGTTCGACCCTGACATTTACACCGACGGCCGTATCTCAGTGCAGGGGATCGACGGGGTTCTATTTCCGCCGGAGGAGACGGAGGCGAAATTGTCGGCAAAAACAGTTCAACACGTGAAAGTAGTTGCCAAGCCAAGGAGAGGGAAATTGCTTGAAGTGGCTTGTCGGATGCTAGGAGCCTTTGGCCAGGATTCTCATTTCACAACTTGTCAATGA

Coding sequence (CDS)

ATGGATTCCGCTGTCTCCGCTGCCGTCAAGCTCTCCTTCATCGTCTCTTCTCTCCTTCTTTCCTTTCACATTTCCTCTGCCGCGCCGGAATATTCGAAGCCTCGGTTGTCGTCTACTTCCTCTAATTCCTCCGGCCAGATTAACTCCAACTCGGTCCTCGTCGCTCTACTGGACTCGCATTACACGGAGCTTGCAGAGCTAATCGAGAAGGCTCTTCTGTTGCAGATTCTTGAAGATGCTGTTGGAAATCATAATCTCACCATTTTCGCGCCGCGAAACGAAGCTCTGGAGCGCGATCTTGACCCCGAGTTCAAGCGGTTTCTTCTCGAGCCGCGTAATTTGAAGTCGCTTCAGACGCTGTTGACGTTTCATGTCATTCCGACTCGGATTGGATTGGGCGAGTGGCCGACTCACAATGAGACGACTCGCCATCAGACGCTGTCAAATCATGTCCTCCGATTGACGAGCCACCGCACGGGTGAACGAACCGTCGATCTTGCCAAGGTCATTCAACCCGACGCCATTACTCGGCCCGACGGTGTCATCCACGGGATCGAACGGCTTCTCATTCCTCAGTCTGTACAAGATGATTTCAACCGCCGACGTAATCTCCTGGCTATAACTGCTGTGAAACCGGAAGGAGCGCCGGAAGTCGATCCGAGGACTCACCGCTTGAAGAAACCGGCTCCACCGGCCGAGCCGGGGTCTCCCCCGGCACTCCCAATCTACGACGCAATGGCTCCAGGACCGTCGTTGGCTCCGGCTCCGGCGCCTGGACCTGGCGGACCTCACCACCACTTCAACGGGGAACGCCAAGTAAAAGATTTCATTCACACTCTTCTTCACTACGGTGGTTACAACGAAATGGCGGACATATTAGTGAATCTAACGTCCTTAGCCATGGAAATGGGGAGGTTAGTTTCAGAAGGCTATGTATTAACCGTTTTGGCGCCGAACGACGAAGCGATGGCGAAACTTACTACAGACCAACTGAGCGAGCCTGGAGCACCGGAGCAAATCATGTACTACCATTTGATTCCGGAGTATCAGACGGAAGAGAGTATGTACAATGCCGTTCGCCGATTTGGAAAAGTCCGATACGACACCTTGAGACTGCCGCATAAGGTAGTTGCGCAAGAGGCCGACGGTTCGGTCAAGTTCGGTCAGGGAGATGGCTCAGCGTATTTGTTCGACCCTGACATTTACACCGACGGCCGTATCTCAGTGCAGGGGATCGACGGGGTTCTATTTCCGCCGGAGGAGACGGAGGCGAAATTGTCGGCAAAAACAGTTCAACACGTGAAAGTAGTTGCCAAGCCAAGGAGAGGGAAATTGCTTGAAGTGGCTTGTCGGATGCTAGGAGCCTTTGGCCAGGATTCTCATTTCACAACTTGTCAATGA

Protein sequence

MDSAVSAAVKLSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ
Homology
BLAST of CmaCh11G008940 vs. ExPASy Swiss-Prot
Match: Q66GR0 (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=FLA17 PE=2 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 3.6e-186
Identity = 342/450 (76.00%), Postives = 383/450 (85.11%), Query Frame = 0

Query: 18  LLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEKALLLQIL 77
           L  S  I SAA   SK   + + S+ SGQINSNSVLVALLDS YTELAEL+EKALLLQ L
Sbjct: 16  LFFSVLIFSAASALSK---NQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTL 75

Query: 78  EDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPT 137
           EDAVG HN+TIFAPRNEALERDLDPEFKRFLLEP NLKSLQTLL FH+IP R+G  +WP+
Sbjct: 76  EDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPS 135

Query: 138 HNE-TTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQD 197
                 +H TL N  +RL S+  G++ VDLA++I+PD +TRPDG+IHGIERLLIP+SVQ+
Sbjct: 136 EESGRVKHHTLGNDQVRL-SNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQE 195

Query: 198 DFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGPSLAPAP 257
           DFNRRR+L +I+AV PEGAPEVDPRT+RLKKPA P   GSPPALPI  AMAPGPSLAPAP
Sbjct: 196 DFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAP 255

Query: 258 APGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVL 317
           APGPGG  HHF+GE QVKDFIHTLLHYGGYNEMADILVNLTSLA EMGRLVSEGYVLTVL
Sbjct: 256 APGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVL 315

Query: 318 APNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKV 377
           APNDEAMAKLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGKV++DTLR PHKV
Sbjct: 316 APNDEAMAKLTTDQLSEPGAPEQIVYYHIIPEYQTEESMYNSVRRFGKVKFDTLRFPHKV 375

Query: 378 VAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKV 437
            A+EADGSVKFG G+ SAYLFDPDIYTDGRISVQGIDGVLFP EE E   S K  + VK 
Sbjct: 376 AAKEADGSVKFGDGEKSAYLFDPDIYTDGRISVQGIDGVLFPQEE-EVVESVK--KPVKK 435

Query: 438 VAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
           + +PRRGKLLEVAC MLGAFG+D++ + C+
Sbjct: 436 IVQPRRGKLLEVACSMLGAFGKDTYLSKCR 458

BLAST of CmaCh11G008940 vs. ExPASy Swiss-Prot
Match: Q8RWC5 (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=FLA16 PE=2 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 3.8e-180
Identity = 339/466 (72.75%), Postives = 378/466 (81.12%), Query Frame = 0

Query: 1   MDSAVSAAVKLSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSH 60
           MDS+  A   L      L L+  I++A P+ +KP          GQINSNSVLVALLDSH
Sbjct: 1   MDSSYGATKFLLL----LFLTTSIATALPD-NKP--------VPGQINSNSVLVALLDSH 60

Query: 61  YTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTL 120
           YTELAEL+EKALLLQ LE+AVG HN+TIFAPRN+ALER+LDP FK FLLEPRNLKSLQ+L
Sbjct: 61  YTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSL 120

Query: 121 LTFHVIPTRIGLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDG 180
           L FH++P RI   +WP+ +    H+TLSN  L LT        VD A++I+PD + RPDG
Sbjct: 121 LMFHILPKRITSPQWPSLSH--HHRTLSNDHLHLTVD-VNTLKVDSAEIIRPDDVIRPDG 180

Query: 181 VIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPAL 240
           +IHGIERLLIP+SVQ+DFNRRR+L +I+AV PEGAPEVDPRTHRLKKP+P    G+PP L
Sbjct: 181 IIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSPAVPAGAPPVL 240

Query: 241 PIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLA 300
           PIYDAM+PGPSLAPAPAPGPGGP  HFNG+ QVKDFIHTLLHYGGYNEMADILVNLTSLA
Sbjct: 241 PIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLA 300

Query: 301 MEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVR 360
            EMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYH+IPEYQTEESMYNAVR
Sbjct: 301 TEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVR 360

Query: 361 RFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPE 420
           RFGKV+YD+LR PHKV+AQEADGSVKFG GDGSAYLFDPDIYTDGRISVQGIDGVLFP E
Sbjct: 361 RFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPKE 420

Query: 421 ETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
           ET A         VK V+K RRGKL+EVACRM+G     S F  CQ
Sbjct: 421 ETPATEIKPAAPVVKKVSKSRRGKLMEVACRMMG-----SRFIPCQ 445

BLAST of CmaCh11G008940 vs. ExPASy Swiss-Prot
Match: Q9FT45 (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana OX=3702 GN=FLA15 PE=2 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 4.7e-178
Identity = 331/456 (72.59%), Postives = 374/456 (82.02%), Query Frame = 0

Query: 11  LSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEK 70
           LS ++  LLL+  I++A P+  KP         SGQINSNSVLVALLDSHYTELAEL+EK
Sbjct: 4   LSKLLFFLLLTISITTALPD--KP--------GSGQINSNSVLVALLDSHYTELAELVEK 63

Query: 71  ALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRI 130
           ALLLQ LE+AVG HN+TIFAPRN+ALE++LDPEFK FLL+P+NLKSLQ+LL FH++P RI
Sbjct: 64  ALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRI 123

Query: 131 GLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLI 190
              ++   +    H+TLSN  L  T+ +     V+ A++ +PD +TRPDG+IHGIERLLI
Sbjct: 124 TSPQF--SSAVVSHRTLSNDHLHFTNGK-----VNSAEITKPDDLTRPDGIIHGIERLLI 183

Query: 191 PQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGP 250
           P+SVQ+DFNRRR+L +I AV PEGAPEVDPRTHRLKK   P   G+PP LP+YDAM+PGP
Sbjct: 184 PRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGP 243

Query: 251 SLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEG 310
           SLAPAPAPGPGGP HHFNGE QVKDFIHTLLHYGGYNEMADILVNLTSLA EMGRLVSEG
Sbjct: 244 SLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEG 303

Query: 311 YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTL 370
           YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYH+IPEYQTEESMYN+VRRFGK+RYD+L
Sbjct: 304 YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKIRYDSL 363

Query: 371 RLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKT 430
           R PHKV AQEADGSVKFG GDGSAYLFDPDIYTDGRISVQGIDGVLFP E+T  +     
Sbjct: 364 RFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPEEKTPVE-KKTG 423

Query: 431 VQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
           V  VK   KPRRGKL+EVAC MLG     S F TCQ
Sbjct: 424 VPVVKKAPKPRRGKLMEVACTMLG-----SQFPTCQ 436

BLAST of CmaCh11G008940 vs. ExPASy Swiss-Prot
Match: Q93W32 (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=FLA18 PE=2 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 1.4e-177
Identity = 326/428 (76.17%), Postives = 360/428 (84.11%), Query Frame = 0

Query: 44  SGQINSNSVLVALLDSHYTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPE 103
           SGQINSNSVLVALLDS YTELAEL+EKALLLQ LEDAVG HN+TIFAPRNEALERDLDP+
Sbjct: 36  SGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPD 95

Query: 104 FKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPTHNE-TTRHQTLS-NHVLRLTSHR--T 163
           FKRFLL+P NLKSLQTLL  H+IP R+G  +WP  N    +H TL  + VL L+  +   
Sbjct: 96  FKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTN 155

Query: 164 GERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVD 223
           G+R V+ A + +PD +TRPDG+IHGIERLLIP+SVQ+DFNRRRNL +I+AV PEGAPE+D
Sbjct: 156 GKRLVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEID 215

Query: 224 PRTHRLKKPAPPAE--PGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFI 283
           PRT+RLKK A       GSPP LPI  AMAPGPSLAPAPAPGPGG H HFNG+ QVKDFI
Sbjct: 216 PRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFI 275

Query: 284 HTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAP 343
           HTLLHYGGYNEMADILVNLTSLA EMGRLVSEGYVLTVLAPNDEAM KLTTDQLSEPGAP
Sbjct: 276 HTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAP 335

Query: 344 EQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLF 403
           EQIMYYH+IPEYQTEESMYN+VRRFGKV+Y+TLR PHKV A+EADGSVKFG GD SAYLF
Sbjct: 336 EQIMYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLF 395

Query: 404 DPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFG 463
           DPDIYTDGRISVQGIDGVLF PEE E +   K    VK V +PRRGKLLEVAC MLGA G
Sbjct: 396 DPDIYTDGRISVQGIDGVLF-PEEKEEETVKKPTGPVKKVVQPRRGKLLEVACSMLGAIG 455

Query: 464 QDSHFTTC 466
           +DS+ + C
Sbjct: 456 KDSYLSRC 462

BLAST of CmaCh11G008940 vs. TAIR 10
Match: AT5G06390.1 (FASCICLIN-like arabinogalactan protein 17 precursor )

HSP 1 Score: 652.5 bits (1682), Expect = 2.5e-187
Identity = 342/450 (76.00%), Postives = 383/450 (85.11%), Query Frame = 0

Query: 18  LLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEKALLLQIL 77
           L  S  I SAA   SK   + + S+ SGQINSNSVLVALLDS YTELAEL+EKALLLQ L
Sbjct: 16  LFFSVLIFSAASALSK---NQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTL 75

Query: 78  EDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPT 137
           EDAVG HN+TIFAPRNEALERDLDPEFKRFLLEP NLKSLQTLL FH+IP R+G  +WP+
Sbjct: 76  EDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPS 135

Query: 138 HNE-TTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQD 197
                 +H TL N  +RL S+  G++ VDLA++I+PD +TRPDG+IHGIERLLIP+SVQ+
Sbjct: 136 EESGRVKHHTLGNDQVRL-SNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQE 195

Query: 198 DFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGPSLAPAP 257
           DFNRRR+L +I+AV PEGAPEVDPRT+RLKKPA P   GSPPALPI  AMAPGPSLAPAP
Sbjct: 196 DFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAP 255

Query: 258 APGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVL 317
           APGPGG  HHF+GE QVKDFIHTLLHYGGYNEMADILVNLTSLA EMGRLVSEGYVLTVL
Sbjct: 256 APGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVL 315

Query: 318 APNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKV 377
           APNDEAMAKLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGKV++DTLR PHKV
Sbjct: 316 APNDEAMAKLTTDQLSEPGAPEQIVYYHIIPEYQTEESMYNSVRRFGKVKFDTLRFPHKV 375

Query: 378 VAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKV 437
            A+EADGSVKFG G+ SAYLFDPDIYTDGRISVQGIDGVLFP EE E   S K  + VK 
Sbjct: 376 AAKEADGSVKFGDGEKSAYLFDPDIYTDGRISVQGIDGVLFPQEE-EVVESVK--KPVKK 435

Query: 438 VAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
           + +PRRGKLLEVAC MLGAFG+D++ + C+
Sbjct: 436 IVQPRRGKLLEVACSMLGAFGKDTYLSKCR 458

BLAST of CmaCh11G008940 vs. TAIR 10
Match: AT2G35860.1 (FASCICLIN-like arabinogalactan protein 16 precursor )

HSP 1 Score: 632.5 bits (1630), Expect = 2.7e-181
Identity = 339/466 (72.75%), Postives = 378/466 (81.12%), Query Frame = 0

Query: 1   MDSAVSAAVKLSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSH 60
           MDS+  A   L      L L+  I++A P+ +KP          GQINSNSVLVALLDSH
Sbjct: 1   MDSSYGATKFLLL----LFLTTSIATALPD-NKP--------VPGQINSNSVLVALLDSH 60

Query: 61  YTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTL 120
           YTELAEL+EKALLLQ LE+AVG HN+TIFAPRN+ALER+LDP FK FLLEPRNLKSLQ+L
Sbjct: 61  YTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSL 120

Query: 121 LTFHVIPTRIGLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDG 180
           L FH++P RI   +WP+ +    H+TLSN  L LT        VD A++I+PD + RPDG
Sbjct: 121 LMFHILPKRITSPQWPSLSH--HHRTLSNDHLHLTVD-VNTLKVDSAEIIRPDDVIRPDG 180

Query: 181 VIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPAL 240
           +IHGIERLLIP+SVQ+DFNRRR+L +I+AV PEGAPEVDPRTHRLKKP+P    G+PP L
Sbjct: 181 IIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSPAVPAGAPPVL 240

Query: 241 PIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLA 300
           PIYDAM+PGPSLAPAPAPGPGGP  HFNG+ QVKDFIHTLLHYGGYNEMADILVNLTSLA
Sbjct: 241 PIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLA 300

Query: 301 MEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVR 360
            EMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYH+IPEYQTEESMYNAVR
Sbjct: 301 TEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVR 360

Query: 361 RFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPE 420
           RFGKV+YD+LR PHKV+AQEADGSVKFG GDGSAYLFDPDIYTDGRISVQGIDGVLFP E
Sbjct: 361 RFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPKE 420

Query: 421 ETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
           ET A         VK V+K RRGKL+EVACRM+G     S F  CQ
Sbjct: 421 ETPATEIKPAAPVVKKVSKSRRGKLMEVACRMMG-----SRFIPCQ 445

BLAST of CmaCh11G008940 vs. TAIR 10
Match: AT3G52370.1 (FASCICLIN-like arabinogalactan protein 15 precursor )

HSP 1 Score: 625.5 bits (1612), Expect = 3.3e-179
Identity = 331/456 (72.59%), Postives = 374/456 (82.02%), Query Frame = 0

Query: 11  LSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEK 70
           LS ++  LLL+  I++A P+  KP         SGQINSNSVLVALLDSHYTELAEL+EK
Sbjct: 4   LSKLLFFLLLTISITTALPD--KP--------GSGQINSNSVLVALLDSHYTELAELVEK 63

Query: 71  ALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRI 130
           ALLLQ LE+AVG HN+TIFAPRN+ALE++LDPEFK FLL+P+NLKSLQ+LL FH++P RI
Sbjct: 64  ALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRI 123

Query: 131 GLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLI 190
              ++   +    H+TLSN  L  T+ +     V+ A++ +PD +TRPDG+IHGIERLLI
Sbjct: 124 TSPQF--SSAVVSHRTLSNDHLHFTNGK-----VNSAEITKPDDLTRPDGIIHGIERLLI 183

Query: 191 PQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGP 250
           P+SVQ+DFNRRR+L +I AV PEGAPEVDPRTHRLKK   P   G+PP LP+YDAM+PGP
Sbjct: 184 PRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGP 243

Query: 251 SLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEG 310
           SLAPAPAPGPGGP HHFNGE QVKDFIHTLLHYGGYNEMADILVNLTSLA EMGRLVSEG
Sbjct: 244 SLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEG 303

Query: 311 YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTL 370
           YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYH+IPEYQTEESMYN+VRRFGK+RYD+L
Sbjct: 304 YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKIRYDSL 363

Query: 371 RLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKT 430
           R PHKV AQEADGSVKFG GDGSAYLFDPDIYTDGRISVQGIDGVLFP E+T  +     
Sbjct: 364 RFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPEEKTPVE-KKTG 423

Query: 431 VQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
           V  VK   KPRRGKL+EVAC MLG     S F TCQ
Sbjct: 424 VPVVKKAPKPRRGKLMEVACTMLG-----SQFPTCQ 436

BLAST of CmaCh11G008940 vs. TAIR 10
Match: AT3G11700.1 (FASCICLIN-like arabinogalactan protein 18 precursor )

HSP 1 Score: 624.0 bits (1608), Expect = 9.6e-179
Identity = 326/428 (76.17%), Postives = 360/428 (84.11%), Query Frame = 0

Query: 44  SGQINSNSVLVALLDSHYTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPE 103
           SGQINSNSVLVALLDS YTELAEL+EKALLLQ LEDAVG HN+TIFAPRNEALERDLDP+
Sbjct: 36  SGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPD 95

Query: 104 FKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPTHNE-TTRHQTLS-NHVLRLTSHR--T 163
           FKRFLL+P NLKSLQTLL  H+IP R+G  +WP  N    +H TL  + VL L+  +   
Sbjct: 96  FKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTN 155

Query: 164 GERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVD 223
           G+R V+ A + +PD +TRPDG+IHGIERLLIP+SVQ+DFNRRRNL +I+AV PEGAPE+D
Sbjct: 156 GKRLVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEID 215

Query: 224 PRTHRLKKPAPPAE--PGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFI 283
           PRT+RLKK A       GSPP LPI  AMAPGPSLAPAPAPGPGG H HFNG+ QVKDFI
Sbjct: 216 PRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFI 275

Query: 284 HTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAP 343
           HTLLHYGGYNEMADILVNLTSLA EMGRLVSEGYVLTVLAPNDEAM KLTTDQLSEPGAP
Sbjct: 276 HTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAP 335

Query: 344 EQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLF 403
           EQIMYYH+IPEYQTEESMYN+VRRFGKV+Y+TLR PHKV A+EADGSVKFG GD SAYLF
Sbjct: 336 EQIMYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLF 395

Query: 404 DPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFG 463
           DPDIYTDGRISVQGIDGVLF PEE E +   K    VK V +PRRGKLLEVAC MLGA G
Sbjct: 396 DPDIYTDGRISVQGIDGVLF-PEEKEEETVKKPTGPVKKVVQPRRGKLLEVACSMLGAIG 455

Query: 464 QDSHFTTC 466
           +DS+ + C
Sbjct: 456 KDSYLSRC 462

BLAST of CmaCh11G008940 vs. TAIR 10
Match: AT5G05650.1 (BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 17 precursor (TAIR:AT5G06390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 4.2e-25
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 0

Query: 329 DQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFG 388
           DQLSE    +QI YYH+IPEYQTE+S Y  VRR G +++DT   PH + A+E   S+KFG
Sbjct: 2   DQLSE----KQIWYYHIIPEYQTEKSFYACVRRSGMIKFDTFYFPHMLSARETQRSIKFG 61

Query: 389 QGDGSAYLFDPDIYTDGRISVQGIDGVLFPPE 421
            G  S  L+DPDIYTDG+IS+QG+ GVLFP E
Sbjct: 62  DGVWSGCLYDPDIYTDGKISIQGVGGVLFPRE 89

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q66GR03.6e-18676.00Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=FLA... [more]
Q8RWC53.8e-18072.75Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=FLA... [more]
Q9FT454.7e-17872.59Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana OX=3702 GN=FLA... [more]
Q93W321.4e-17776.17Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=FLA... [more]
Match NameE-valueIdentityDescription
AT5G06390.12.5e-18776.00FASCICLIN-like arabinogalactan protein 17 precursor [more]
AT2G35860.12.7e-18172.75FASCICLIN-like arabinogalactan protein 16 precursor [more]
AT3G52370.13.3e-17972.59FASCICLIN-like arabinogalactan protein 15 precursor [more]
AT3G11700.19.6e-17976.17FASCICLIN-like arabinogalactan protein 18 precursor [more]
AT5G05650.14.2e-2558.70BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan prote... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000782FAS1 domainSMARTSM00554fasc_3coord: 314..419
e-value: 8.1E-15
score: 65.2
coord: 87..192
e-value: 3.1E-19
score: 79.9
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 60..191
e-value: 1.1E-19
score: 70.9
coord: 311..418
e-value: 6.1E-7
score: 29.7
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 48..189
score: 18.530769
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 273..401
score: 10.106834
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10FAS1 domaincoord: 52..192
e-value: 7.1E-20
score: 73.7
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10FAS1 domaincoord: 295..419
e-value: 1.8E-9
score: 39.9
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 252..420
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 51..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..244
NoneNo IPR availablePANTHERPTHR32499:SF5FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17coord: 14..466
IPR044654Fasciclin-like arabinogalactan protein 15/16/17/18PANTHERPTHR32499FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16coord: 14..466

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G008940.1CmaCh11G008940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane