Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAGAAAAAGGCTTTGTAAAAGAATTGCTCTCACGAGCTAAAACAGTGGCTGTACATTCGCGCTCTGGAAGGAAGCTTTTCCATTTTTCTTTGCCGGCCGCCATGGATTCCGCTGTCTCCGCTGCCGTCAAGCTCTCCTTCATCGTCTCTTCTCTCCTTCTTTCCTTTCACATTTCCTCTGCCGCGCCGGAATATTCGAAGCCTCGGTTGTCGTCTACTTCCTCTAATTCCTCCGGCCAGATTAACTCCAACTCGGTCCTCGTCGCTCTACTGGACTCGCATTACACGGAGCTTGCAGAGCTAATCGAGAAGGCTCTTCTGTTGCAGATTCTTGAAGATGCTGTTGGAAATCATAATCTCACCATTTTCGCGCCGCGAAACGAAGCTCTGGAGCGCGATCTTGACCCCGAGTTCAAGCGGTTTCTTCTCGAGCCGCGTAATTTGAAGTCGCTTCAGACGCTGTTGACGTTTCATGTCATTCCGACTCGGATTGGATTGGGCGAGTGGCCGACTCACAATGAGACGACTCGCCATCAGACGCTGTCAAATCATGTCCTCCGATTGACGAGCCACCGCACGGGTGAACGAACCGTCGATCTTGCCAAGGTCATTCAACCCGACGCCATTACTCGGCCCGACGGTGTCATCCACGGGATCGAACGGCTTCTCATTCCTCAGTCTGTACAAGATGATTTCAACCGCCGACGTAATCTCCTGGCTATAACTGCTGTGAAACCGGAAGGAGCGCCGGAAGTCGATCCGAGGACTCACCGCTTGAAGAAACCGGCTCCACCGGCCGAGCCGGGGTCTCCCCCGGCACTCCCAATCTACGACGCAATGGCTCCAGGACCGTCGTTGGCTCCGGCTCCGGCGCCTGGACCTGGCGGACCTCACCACCACTTCAACGGGGAACGCCAAGTAAAAGATTTCATTCACACTCTTCTTCACTACGGTGGTTACAACGAAATGGCGGACATATTAGTGAATCTAACGTCCTTAGCCATGGAAATGGGGAGGTTAGTTTCAGAAGGCTATGTATTAACCGTTTTGGCGCCGAACGACGAAGCGATGGCGAAACTTACTACAGACCAACTGAGCGAGCCTGGAGCACCGGAGCAAATCATGTACTACCATTTGATTCCGGAGTATCAGACGGAAGAGAGTATGTACAATGCCGTTCGCCGATTTGGAAAAGTCCGATACGACACCTTGAGACTGCCGCATAAGGTAGTTGCGCAAGAGGCCGACGGTTCGGTCAAGTTCGGTCAGGGAGATGGCTCAGCGTATTTGTTCGACCCTGACATTTACACCGACGGCCGTATCTCAGTGCAGGGGATCGACGGGGTTCTATTTCCGCCGGAGGAGACGGAGGCGAAATTGTCGGCAAAAACAGTTCAACACGTGAAAGTAGTTGCCAAGCCAAGGAGAGGTACATGACAGTTAAATTTCAGCATCGTTTCGTTTTACAATTCAATTTCCATGAATCAATTGCTCTGTTCGACTTTGATTTGTTAGTGTAGCGTCGGTTTTCACGCCGGTTTTTAGGTCTAGTTGTCTAGTTCCGGTGGCCGTCTTCAACGGCGGATTGATTAGGGATTTTCCTGATAGATAAAAAATAATAATAATAAATAACTAAAAGTGGAAGCAATTGCTTGGGATGTGGGGATTTGGTGGCAAAGTTGATGCGTTGAAATGGCCCTATTCTGAAACTGATTTTCTGGTTGAAGTTTACTTCTAAAGAAAGTGACTGAGTTTCTTCAATGGTGTTGCTTGGAATCTGTATAATCTGATGGAAACAAAAATTCGAAGTAAAATCTTAGTTAGGGTTTCTTGAAGGGAAGAGGAAGAAGTAGCTTGACTTTAAGACCTTGTGGCCATAAACTATCACTTGGATCTTCTGTTTAGTATTGATCATTGGATTTTCTTTACAACTATGCATGTGGGTTTTGTTTGTCTTGATGCAAATTGGATTGAACATGATTAGAATTATCAATGGTGTGGCTGTTGAGTTATCAAAATCCCAAATGAGTAGAAAAATAATTAAGAGTAGTCTTCCTCTTAGAAACTGAAAAGGTAAGAAATGAACAGGAAAAAAGTGAAGTATGAGGAACAAACAAAATAAATAATTTGGTTGGTGAACTCGGAATATCTTATGGGGTTTTAAGAAATGGGACCCTTTTGAAGAGAAAACCATTGAAACAGCAGCTGTGGTAGAGAGAAAGAGCTCCTGTGCTTTCCCCATTAGCTACCCTTCATATATTCCTCTTTACCTAACTGTTCTTATTTATTTTGATCTATAAACATTCAATGAATTTTGTATAAAGATTCATTTGATTCATTGTGATTGATTTTCAACAAATCATTGAGCTTCTTGACATGACACACATCTGTTTTTTCATACGATGTTTATAACCAAACAAAACAATCGAGAATTAAAGAATTTAGAAGTGTTGAATTTCAGATGCTGTGAATAGAATTAAAAAATTTCTTTTGTTATTACAATGGCAGGGAAATTGCTTGAAGTGGCTTGTCGGATGCTAGGAGCCTTTGGCCAGGATTCTCATTTCACAACTTGTCAATGA
mRNA sequence
TAAAAGAAAAAGGCTTTGTAAAAGAATTGCTCTCACGAGCTAAAACAGTGGCTGTACATTCGCGCTCTGGAAGGAAGCTTTTCCATTTTTCTTTGCCGGCCGCCATGGATTCCGCTGTCTCCGCTGCCGTCAAGCTCTCCTTCATCGTCTCTTCTCTCCTTCTTTCCTTTCACATTTCCTCTGCCGCGCCGGAATATTCGAAGCCTCGGTTGTCGTCTACTTCCTCTAATTCCTCCGGCCAGATTAACTCCAACTCGGTCCTCGTCGCTCTACTGGACTCGCATTACACGGAGCTTGCAGAGCTAATCGAGAAGGCTCTTCTGTTGCAGATTCTTGAAGATGCTGTTGGAAATCATAATCTCACCATTTTCGCGCCGCGAAACGAAGCTCTGGAGCGCGATCTTGACCCCGAGTTCAAGCGGTTTCTTCTCGAGCCGCGTAATTTGAAGTCGCTTCAGACGCTGTTGACGTTTCATGTCATTCCGACTCGGATTGGATTGGGCGAGTGGCCGACTCACAATGAGACGACTCGCCATCAGACGCTGTCAAATCATGTCCTCCGATTGACGAGCCACCGCACGGGTGAACGAACCGTCGATCTTGCCAAGGTCATTCAACCCGACGCCATTACTCGGCCCGACGGTGTCATCCACGGGATCGAACGGCTTCTCATTCCTCAGTCTGTACAAGATGATTTCAACCGCCGACGTAATCTCCTGGCTATAACTGCTGTGAAACCGGAAGGAGCGCCGGAAGTCGATCCGAGGACTCACCGCTTGAAGAAACCGGCTCCACCGGCCGAGCCGGGGTCTCCCCCGGCACTCCCAATCTACGACGCAATGGCTCCAGGACCGTCGTTGGCTCCGGCTCCGGCGCCTGGACCTGGCGGACCTCACCACCACTTCAACGGGGAACGCCAAGTAAAAGATTTCATTCACACTCTTCTTCACTACGGTGGTTACAACGAAATGGCGGACATATTAGTGAATCTAACGTCCTTAGCCATGGAAATGGGGAGGTTAGTTTCAGAAGGCTATGTATTAACCGTTTTGGCGCCGAACGACGAAGCGATGGCGAAACTTACTACAGACCAACTGAGCGAGCCTGGAGCACCGGAGCAAATCATGTACTACCATTTGATTCCGGAGTATCAGACGGAAGAGAGTATGTACAATGCCGTTCGCCGATTTGGAAAAGTCCGATACGACACCTTGAGACTGCCGCATAAGGTAGTTGCGCAAGAGGCCGACGGTTCGGTCAAGTTCGGTCAGGGAGATGGCTCAGCGTATTTGTTCGACCCTGACATTTACACCGACGGCCGTATCTCAGTGCAGGGGATCGACGGGGTTCTATTTCCGCCGGAGGAGACGGAGGCGAAATTGTCGGCAAAAACAGTTCAACACGTGAAAGTAGTTGCCAAGCCAAGGAGAGGGAAATTGCTTGAAGTGGCTTGTCGGATGCTAGGAGCCTTTGGCCAGGATTCTCATTTCACAACTTGTCAATGA
Coding sequence (CDS)
ATGGATTCCGCTGTCTCCGCTGCCGTCAAGCTCTCCTTCATCGTCTCTTCTCTCCTTCTTTCCTTTCACATTTCCTCTGCCGCGCCGGAATATTCGAAGCCTCGGTTGTCGTCTACTTCCTCTAATTCCTCCGGCCAGATTAACTCCAACTCGGTCCTCGTCGCTCTACTGGACTCGCATTACACGGAGCTTGCAGAGCTAATCGAGAAGGCTCTTCTGTTGCAGATTCTTGAAGATGCTGTTGGAAATCATAATCTCACCATTTTCGCGCCGCGAAACGAAGCTCTGGAGCGCGATCTTGACCCCGAGTTCAAGCGGTTTCTTCTCGAGCCGCGTAATTTGAAGTCGCTTCAGACGCTGTTGACGTTTCATGTCATTCCGACTCGGATTGGATTGGGCGAGTGGCCGACTCACAATGAGACGACTCGCCATCAGACGCTGTCAAATCATGTCCTCCGATTGACGAGCCACCGCACGGGTGAACGAACCGTCGATCTTGCCAAGGTCATTCAACCCGACGCCATTACTCGGCCCGACGGTGTCATCCACGGGATCGAACGGCTTCTCATTCCTCAGTCTGTACAAGATGATTTCAACCGCCGACGTAATCTCCTGGCTATAACTGCTGTGAAACCGGAAGGAGCGCCGGAAGTCGATCCGAGGACTCACCGCTTGAAGAAACCGGCTCCACCGGCCGAGCCGGGGTCTCCCCCGGCACTCCCAATCTACGACGCAATGGCTCCAGGACCGTCGTTGGCTCCGGCTCCGGCGCCTGGACCTGGCGGACCTCACCACCACTTCAACGGGGAACGCCAAGTAAAAGATTTCATTCACACTCTTCTTCACTACGGTGGTTACAACGAAATGGCGGACATATTAGTGAATCTAACGTCCTTAGCCATGGAAATGGGGAGGTTAGTTTCAGAAGGCTATGTATTAACCGTTTTGGCGCCGAACGACGAAGCGATGGCGAAACTTACTACAGACCAACTGAGCGAGCCTGGAGCACCGGAGCAAATCATGTACTACCATTTGATTCCGGAGTATCAGACGGAAGAGAGTATGTACAATGCCGTTCGCCGATTTGGAAAAGTCCGATACGACACCTTGAGACTGCCGCATAAGGTAGTTGCGCAAGAGGCCGACGGTTCGGTCAAGTTCGGTCAGGGAGATGGCTCAGCGTATTTGTTCGACCCTGACATTTACACCGACGGCCGTATCTCAGTGCAGGGGATCGACGGGGTTCTATTTCCGCCGGAGGAGACGGAGGCGAAATTGTCGGCAAAAACAGTTCAACACGTGAAAGTAGTTGCCAAGCCAAGGAGAGGGAAATTGCTTGAAGTGGCTTGTCGGATGCTAGGAGCCTTTGGCCAGGATTCTCATTTCACAACTTGTCAATGA
Protein sequence
MDSAVSAAVKLSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ
Homology
BLAST of CmaCh11G008940 vs. ExPASy Swiss-Prot
Match:
Q66GR0 (Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=FLA17 PE=2 SV=1)
HSP 1 Score: 652.5 bits (1682), Expect = 3.6e-186
Identity = 342/450 (76.00%), Postives = 383/450 (85.11%), Query Frame = 0
Query: 18 LLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEKALLLQIL 77
L S I SAA SK + + S+ SGQINSNSVLVALLDS YTELAEL+EKALLLQ L
Sbjct: 16 LFFSVLIFSAASALSK---NQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTL 75
Query: 78 EDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPT 137
EDAVG HN+TIFAPRNEALERDLDPEFKRFLLEP NLKSLQTLL FH+IP R+G +WP+
Sbjct: 76 EDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPS 135
Query: 138 HNE-TTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQD 197
+H TL N +RL S+ G++ VDLA++I+PD +TRPDG+IHGIERLLIP+SVQ+
Sbjct: 136 EESGRVKHHTLGNDQVRL-SNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQE 195
Query: 198 DFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGPSLAPAP 257
DFNRRR+L +I+AV PEGAPEVDPRT+RLKKPA P GSPPALPI AMAPGPSLAPAP
Sbjct: 196 DFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAP 255
Query: 258 APGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVL 317
APGPGG HHF+GE QVKDFIHTLLHYGGYNEMADILVNLTSLA EMGRLVSEGYVLTVL
Sbjct: 256 APGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVL 315
Query: 318 APNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKV 377
APNDEAMAKLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGKV++DTLR PHKV
Sbjct: 316 APNDEAMAKLTTDQLSEPGAPEQIVYYHIIPEYQTEESMYNSVRRFGKVKFDTLRFPHKV 375
Query: 378 VAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKV 437
A+EADGSVKFG G+ SAYLFDPDIYTDGRISVQGIDGVLFP EE E S K + VK
Sbjct: 376 AAKEADGSVKFGDGEKSAYLFDPDIYTDGRISVQGIDGVLFPQEE-EVVESVK--KPVKK 435
Query: 438 VAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
+ +PRRGKLLEVAC MLGAFG+D++ + C+
Sbjct: 436 IVQPRRGKLLEVACSMLGAFGKDTYLSKCR 458
BLAST of CmaCh11G008940 vs. ExPASy Swiss-Prot
Match:
Q8RWC5 (Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=FLA16 PE=2 SV=1)
HSP 1 Score: 632.5 bits (1630), Expect = 3.8e-180
Identity = 339/466 (72.75%), Postives = 378/466 (81.12%), Query Frame = 0
Query: 1 MDSAVSAAVKLSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSH 60
MDS+ A L L L+ I++A P+ +KP GQINSNSVLVALLDSH
Sbjct: 1 MDSSYGATKFLLL----LFLTTSIATALPD-NKP--------VPGQINSNSVLVALLDSH 60
Query: 61 YTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTL 120
YTELAEL+EKALLLQ LE+AVG HN+TIFAPRN+ALER+LDP FK FLLEPRNLKSLQ+L
Sbjct: 61 YTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSL 120
Query: 121 LTFHVIPTRIGLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDG 180
L FH++P RI +WP+ + H+TLSN L LT VD A++I+PD + RPDG
Sbjct: 121 LMFHILPKRITSPQWPSLSH--HHRTLSNDHLHLTVD-VNTLKVDSAEIIRPDDVIRPDG 180
Query: 181 VIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPAL 240
+IHGIERLLIP+SVQ+DFNRRR+L +I+AV PEGAPEVDPRTHRLKKP+P G+PP L
Sbjct: 181 IIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSPAVPAGAPPVL 240
Query: 241 PIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLA 300
PIYDAM+PGPSLAPAPAPGPGGP HFNG+ QVKDFIHTLLHYGGYNEMADILVNLTSLA
Sbjct: 241 PIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLA 300
Query: 301 MEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVR 360
EMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYH+IPEYQTEESMYNAVR
Sbjct: 301 TEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVR 360
Query: 361 RFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPE 420
RFGKV+YD+LR PHKV+AQEADGSVKFG GDGSAYLFDPDIYTDGRISVQGIDGVLFP E
Sbjct: 361 RFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPKE 420
Query: 421 ETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
ET A VK V+K RRGKL+EVACRM+G S F CQ
Sbjct: 421 ETPATEIKPAAPVVKKVSKSRRGKLMEVACRMMG-----SRFIPCQ 445
BLAST of CmaCh11G008940 vs. ExPASy Swiss-Prot
Match:
Q9FT45 (Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana OX=3702 GN=FLA15 PE=2 SV=1)
HSP 1 Score: 625.5 bits (1612), Expect = 4.7e-178
Identity = 331/456 (72.59%), Postives = 374/456 (82.02%), Query Frame = 0
Query: 11 LSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEK 70
LS ++ LLL+ I++A P+ KP SGQINSNSVLVALLDSHYTELAEL+EK
Sbjct: 4 LSKLLFFLLLTISITTALPD--KP--------GSGQINSNSVLVALLDSHYTELAELVEK 63
Query: 71 ALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRI 130
ALLLQ LE+AVG HN+TIFAPRN+ALE++LDPEFK FLL+P+NLKSLQ+LL FH++P RI
Sbjct: 64 ALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRI 123
Query: 131 GLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLI 190
++ + H+TLSN L T+ + V+ A++ +PD +TRPDG+IHGIERLLI
Sbjct: 124 TSPQF--SSAVVSHRTLSNDHLHFTNGK-----VNSAEITKPDDLTRPDGIIHGIERLLI 183
Query: 191 PQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGP 250
P+SVQ+DFNRRR+L +I AV PEGAPEVDPRTHRLKK P G+PP LP+YDAM+PGP
Sbjct: 184 PRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGP 243
Query: 251 SLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEG 310
SLAPAPAPGPGGP HHFNGE QVKDFIHTLLHYGGYNEMADILVNLTSLA EMGRLVSEG
Sbjct: 244 SLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEG 303
Query: 311 YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTL 370
YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYH+IPEYQTEESMYN+VRRFGK+RYD+L
Sbjct: 304 YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKIRYDSL 363
Query: 371 RLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKT 430
R PHKV AQEADGSVKFG GDGSAYLFDPDIYTDGRISVQGIDGVLFP E+T +
Sbjct: 364 RFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPEEKTPVE-KKTG 423
Query: 431 VQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
V VK KPRRGKL+EVAC MLG S F TCQ
Sbjct: 424 VPVVKKAPKPRRGKLMEVACTMLG-----SQFPTCQ 436
BLAST of CmaCh11G008940 vs. ExPASy Swiss-Prot
Match:
Q93W32 (Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=FLA18 PE=2 SV=1)
HSP 1 Score: 624.0 bits (1608), Expect = 1.4e-177
Identity = 326/428 (76.17%), Postives = 360/428 (84.11%), Query Frame = 0
Query: 44 SGQINSNSVLVALLDSHYTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPE 103
SGQINSNSVLVALLDS YTELAEL+EKALLLQ LEDAVG HN+TIFAPRNEALERDLDP+
Sbjct: 36 SGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPD 95
Query: 104 FKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPTHNE-TTRHQTLS-NHVLRLTSHR--T 163
FKRFLL+P NLKSLQTLL H+IP R+G +WP N +H TL + VL L+ +
Sbjct: 96 FKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTN 155
Query: 164 GERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVD 223
G+R V+ A + +PD +TRPDG+IHGIERLLIP+SVQ+DFNRRRNL +I+AV PEGAPE+D
Sbjct: 156 GKRLVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEID 215
Query: 224 PRTHRLKKPAPPAE--PGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFI 283
PRT+RLKK A GSPP LPI AMAPGPSLAPAPAPGPGG H HFNG+ QVKDFI
Sbjct: 216 PRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFI 275
Query: 284 HTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAP 343
HTLLHYGGYNEMADILVNLTSLA EMGRLVSEGYVLTVLAPNDEAM KLTTDQLSEPGAP
Sbjct: 276 HTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAP 335
Query: 344 EQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLF 403
EQIMYYH+IPEYQTEESMYN+VRRFGKV+Y+TLR PHKV A+EADGSVKFG GD SAYLF
Sbjct: 336 EQIMYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLF 395
Query: 404 DPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFG 463
DPDIYTDGRISVQGIDGVLF PEE E + K VK V +PRRGKLLEVAC MLGA G
Sbjct: 396 DPDIYTDGRISVQGIDGVLF-PEEKEEETVKKPTGPVKKVVQPRRGKLLEVACSMLGAIG 455
Query: 464 QDSHFTTC 466
+DS+ + C
Sbjct: 456 KDSYLSRC 462
BLAST of CmaCh11G008940 vs. TAIR 10
Match:
AT5G06390.1 (FASCICLIN-like arabinogalactan protein 17 precursor )
HSP 1 Score: 652.5 bits (1682), Expect = 2.5e-187
Identity = 342/450 (76.00%), Postives = 383/450 (85.11%), Query Frame = 0
Query: 18 LLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEKALLLQIL 77
L S I SAA SK + + S+ SGQINSNSVLVALLDS YTELAEL+EKALLLQ L
Sbjct: 16 LFFSVLIFSAASALSK---NQSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTL 75
Query: 78 EDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPT 137
EDAVG HN+TIFAPRNEALERDLDPEFKRFLLEP NLKSLQTLL FH+IP R+G +WP+
Sbjct: 76 EDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPS 135
Query: 138 HNE-TTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQD 197
+H TL N +RL S+ G++ VDLA++I+PD +TRPDG+IHGIERLLIP+SVQ+
Sbjct: 136 EESGRVKHHTLGNDQVRL-SNGQGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQE 195
Query: 198 DFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGPSLAPAP 257
DFNRRR+L +I+AV PEGAPEVDPRT+RLKKPA P GSPPALPI AMAPGPSLAPAP
Sbjct: 196 DFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAP 255
Query: 258 APGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVL 317
APGPGG HHF+GE QVKDFIHTLLHYGGYNEMADILVNLTSLA EMGRLVSEGYVLTVL
Sbjct: 256 APGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVL 315
Query: 318 APNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKV 377
APNDEAMAKLTTDQLSEPGAPEQI+YYH+IPEYQTEESMYN+VRRFGKV++DTLR PHKV
Sbjct: 316 APNDEAMAKLTTDQLSEPGAPEQIVYYHIIPEYQTEESMYNSVRRFGKVKFDTLRFPHKV 375
Query: 378 VAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKV 437
A+EADGSVKFG G+ SAYLFDPDIYTDGRISVQGIDGVLFP EE E S K + VK
Sbjct: 376 AAKEADGSVKFGDGEKSAYLFDPDIYTDGRISVQGIDGVLFPQEE-EVVESVK--KPVKK 435
Query: 438 VAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
+ +PRRGKLLEVAC MLGAFG+D++ + C+
Sbjct: 436 IVQPRRGKLLEVACSMLGAFGKDTYLSKCR 458
BLAST of CmaCh11G008940 vs. TAIR 10
Match:
AT2G35860.1 (FASCICLIN-like arabinogalactan protein 16 precursor )
HSP 1 Score: 632.5 bits (1630), Expect = 2.7e-181
Identity = 339/466 (72.75%), Postives = 378/466 (81.12%), Query Frame = 0
Query: 1 MDSAVSAAVKLSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSH 60
MDS+ A L L L+ I++A P+ +KP GQINSNSVLVALLDSH
Sbjct: 1 MDSSYGATKFLLL----LFLTTSIATALPD-NKP--------VPGQINSNSVLVALLDSH 60
Query: 61 YTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTL 120
YTELAEL+EKALLLQ LE+AVG HN+TIFAPRN+ALER+LDP FK FLLEPRNLKSLQ+L
Sbjct: 61 YTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSLQSL 120
Query: 121 LTFHVIPTRIGLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDG 180
L FH++P RI +WP+ + H+TLSN L LT VD A++I+PD + RPDG
Sbjct: 121 LMFHILPKRITSPQWPSLSH--HHRTLSNDHLHLTVD-VNTLKVDSAEIIRPDDVIRPDG 180
Query: 181 VIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPAL 240
+IHGIERLLIP+SVQ+DFNRRR+L +I+AV PEGAPEVDPRTHRLKKP+P G+PP L
Sbjct: 181 IIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSPAVPAGAPPVL 240
Query: 241 PIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLA 300
PIYDAM+PGPSLAPAPAPGPGGP HFNG+ QVKDFIHTLLHYGGYNEMADILVNLTSLA
Sbjct: 241 PIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTSLA 300
Query: 301 MEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVR 360
EMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYH+IPEYQTEESMYNAVR
Sbjct: 301 TEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVR 360
Query: 361 RFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPE 420
RFGKV+YD+LR PHKV+AQEADGSVKFG GDGSAYLFDPDIYTDGRISVQGIDGVLFP E
Sbjct: 361 RFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPKE 420
Query: 421 ETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
ET A VK V+K RRGKL+EVACRM+G S F CQ
Sbjct: 421 ETPATEIKPAAPVVKKVSKSRRGKLMEVACRMMG-----SRFIPCQ 445
BLAST of CmaCh11G008940 vs. TAIR 10
Match:
AT3G52370.1 (FASCICLIN-like arabinogalactan protein 15 precursor )
HSP 1 Score: 625.5 bits (1612), Expect = 3.3e-179
Identity = 331/456 (72.59%), Postives = 374/456 (82.02%), Query Frame = 0
Query: 11 LSFIVSSLLLSFHISSAAPEYSKPRLSSTSSNSSGQINSNSVLVALLDSHYTELAELIEK 70
LS ++ LLL+ I++A P+ KP SGQINSNSVLVALLDSHYTELAEL+EK
Sbjct: 4 LSKLLFFLLLTISITTALPD--KP--------GSGQINSNSVLVALLDSHYTELAELVEK 63
Query: 71 ALLLQILEDAVGNHNLTIFAPRNEALERDLDPEFKRFLLEPRNLKSLQTLLTFHVIPTRI 130
ALLLQ LE+AVG HN+TIFAPRN+ALE++LDPEFK FLL+P+NLKSLQ+LL FH++P RI
Sbjct: 64 ALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRI 123
Query: 131 GLGEWPTHNETTRHQTLSNHVLRLTSHRTGERTVDLAKVIQPDAITRPDGVIHGIERLLI 190
++ + H+TLSN L T+ + V+ A++ +PD +TRPDG+IHGIERLLI
Sbjct: 124 TSPQF--SSAVVSHRTLSNDHLHFTNGK-----VNSAEITKPDDLTRPDGIIHGIERLLI 183
Query: 191 PQSVQDDFNRRRNLLAITAVKPEGAPEVDPRTHRLKKPAPPAEPGSPPALPIYDAMAPGP 250
P+SVQ+DFNRRR+L +I AV PEGAPEVDPRTHRLKK P G+PP LP+YDAM+PGP
Sbjct: 184 PRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGP 243
Query: 251 SLAPAPAPGPGGPHHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLAMEMGRLVSEG 310
SLAPAPAPGPGGP HHFNGE QVKDFIHTLLHYGGYNEMADILVNLTSLA EMGRLVSEG
Sbjct: 244 SLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEG 303
Query: 311 YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTL 370
YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYH+IPEYQTEESMYN+VRRFGK+RYD+L
Sbjct: 304 YVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVRRFGKIRYDSL 363
Query: 371 RLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEETEAKLSAKT 430
R PHKV AQEADGSVKFG GDGSAYLFDPDIYTDGRISVQGIDGVLFP E+T +
Sbjct: 364 RFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPEEKTPVE-KKTG 423
Query: 431 VQHVKVVAKPRRGKLLEVACRMLGAFGQDSHFTTCQ 467
V VK KPRRGKL+EVAC MLG S F TCQ
Sbjct: 424 VPVVKKAPKPRRGKLMEVACTMLG-----SQFPTCQ 436
BLAST of CmaCh11G008940 vs. TAIR 10
Match:
AT3G11700.1 (FASCICLIN-like arabinogalactan protein 18 precursor )
HSP 1 Score: 624.0 bits (1608), Expect = 9.6e-179
Identity = 326/428 (76.17%), Postives = 360/428 (84.11%), Query Frame = 0
Query: 44 SGQINSNSVLVALLDSHYTELAELIEKALLLQILEDAVGNHNLTIFAPRNEALERDLDPE 103
SGQINSNSVLVALLDS YTELAEL+EKALLLQ LEDAVG HN+TIFAPRNEALERDLDP+
Sbjct: 36 SGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPD 95
Query: 104 FKRFLLEPRNLKSLQTLLTFHVIPTRIGLGEWPTHNE-TTRHQTLS-NHVLRLTSHR--T 163
FKRFLL+P NLKSLQTLL H+IP R+G +WP N +H TL + VL L+ +
Sbjct: 96 FKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKGTN 155
Query: 164 GERTVDLAKVIQPDAITRPDGVIHGIERLLIPQSVQDDFNRRRNLLAITAVKPEGAPEVD 223
G+R V+ A + +PD +TRPDG+IHGIERLLIP+SVQ+DFNRRRNL +I+AV PEGAPE+D
Sbjct: 156 GKRLVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEID 215
Query: 224 PRTHRLKKPAPPAE--PGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFI 283
PRT+RLKK A GSPP LPI AMAPGPSLAPAPAPGPGG H HFNG+ QVKDFI
Sbjct: 216 PRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFI 275
Query: 284 HTLLHYGGYNEMADILVNLTSLAMEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAP 343
HTLLHYGGYNEMADILVNLTSLA EMGRLVSEGYVLTVLAPNDEAM KLTTDQLSEPGAP
Sbjct: 276 HTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAP 335
Query: 344 EQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLF 403
EQIMYYH+IPEYQTEESMYN+VRRFGKV+Y+TLR PHKV A+EADGSVKFG GD SAYLF
Sbjct: 336 EQIMYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLF 395
Query: 404 DPDIYTDGRISVQGIDGVLFPPEETEAKLSAKTVQHVKVVAKPRRGKLLEVACRMLGAFG 463
DPDIYTDGRISVQGIDGVLF PEE E + K VK V +PRRGKLLEVAC MLGA G
Sbjct: 396 DPDIYTDGRISVQGIDGVLF-PEEKEEETVKKPTGPVKKVVQPRRGKLLEVACSMLGAIG 455
Query: 464 QDSHFTTC 466
+DS+ + C
Sbjct: 456 KDSYLSRC 462
BLAST of CmaCh11G008940 vs. TAIR 10
Match:
AT5G05650.1 (BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan protein 17 precursor (TAIR:AT5G06390.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 113.6 bits (283), Expect = 4.2e-25
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 0
Query: 329 DQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFG 388
DQLSE +QI YYH+IPEYQTE+S Y VRR G +++DT PH + A+E S+KFG
Sbjct: 2 DQLSE----KQIWYYHIIPEYQTEKSFYACVRRSGMIKFDTFYFPHMLSARETQRSIKFG 61
Query: 389 QGDGSAYLFDPDIYTDGRISVQGIDGVLFPPE 421
G S L+DPDIYTDG+IS+QG+ GVLFP E
Sbjct: 62 DGVWSGCLYDPDIYTDGKISIQGVGGVLFPRE 89
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q66GR0 | 3.6e-186 | 76.00 | Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis thaliana OX=3702 GN=FLA... | [more] |
Q8RWC5 | 3.8e-180 | 72.75 | Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=FLA... | [more] |
Q9FT45 | 4.7e-178 | 72.59 | Fasciclin-like arabinogalactan protein 15 OS=Arabidopsis thaliana OX=3702 GN=FLA... | [more] |
Q93W32 | 1.4e-177 | 76.17 | Fasciclin-like arabinogalactan protein 18 OS=Arabidopsis thaliana OX=3702 GN=FLA... | [more] |
Match Name | E-value | Identity | Description | |
AT5G06390.1 | 2.5e-187 | 76.00 | FASCICLIN-like arabinogalactan protein 17 precursor | [more] |
AT2G35860.1 | 2.7e-181 | 72.75 | FASCICLIN-like arabinogalactan protein 16 precursor | [more] |
AT3G52370.1 | 3.3e-179 | 72.59 | FASCICLIN-like arabinogalactan protein 15 precursor | [more] |
AT3G11700.1 | 9.6e-179 | 76.17 | FASCICLIN-like arabinogalactan protein 18 precursor | [more] |
AT5G05650.1 | 4.2e-25 | 58.70 | BEST Arabidopsis thaliana protein match is: FASCICLIN-like arabinogalactan prote... | [more] |