Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACATGACGAGGCAAGCTGTCAAGCTCCCCCTGAGGGTCCCTTTCTGTGCATTAACAACTGTGGCTTTTTCGGAAGTGCTGCTACTATGAATATGTGTTCCAAGTGCCACAAGGATTTGATGTTGAAACAAGATCATGCTCAATTGAGTGCTTCAACTATTGGAAGTATCATGAATGGATCGTCTACTTCTAACCAAAATGAACCCTTTGTCACCGCCAGTGTCGATGTGCAAGTTAGTTTGGCGGAACCTAAGATCATCTCAGTGCAGGCATCTCCTATGGTTTCTGAAGGGAGCAGTGAAGTGAAGCCTAAGGACAGACCTAGACGTTGCAACAGTTGCAACAAGCGAGTCGGATTAATGGGATTCGACTGTCGTTGTGGTAATATCTTCTGTGCTATTCATCGTTACTCCGACAAACACAATTGCCCCTTTGATTATCGCACCTCTGCACAGGATGCAATTGCTAAAGCCAACCCCATTGTGAAGGCGGAGAAGCTCGATAAGATCTAG
mRNA sequence
ATGGAACATGACGAGGCAAGCTGTCAAGCTCCCCCTGAGGGTCCCTTTCTGTGCATTAACAACTGTGGCTTTTTCGGAAGTGCTGCTACTATGAATATGTGTTCCAAGTGCCACAAGGATTTGATGTTGAAACAAGATCATGCTCAATTGAGTGCTTCAACTATTGGAAGTATCATGAATGGATCGTCTACTTCTAACCAAAATGAACCCTTTGTCACCGCCAGTGTCGATGTGCAAGTTAGTTTGGCGGAACCTAAGATCATCTCAGTGCAGGCATCTCCTATGGTTTCTGAAGGGAGCAGTGAAGTGAAGCCTAAGGACAGACCTAGACGTTGCAACAGTTGCAACAAGCGAGTCGGATTAATGGGATTCGACTGTCGTTGTGGTAATATCTTCTGTGCTATTCATCGTTACTCCGACAAACACAATTGCCCCTTTGATTATCGCACCTCTGCACAGGATGCAATTGCTAAAGCCAACCCCATTGTGAAGGCGGAGAAGCTCGATAAGATCTAG
Coding sequence (CDS)
ATGGAACATGACGAGGCAAGCTGTCAAGCTCCCCCTGAGGGTCCCTTTCTGTGCATTAACAACTGTGGCTTTTTCGGAAGTGCTGCTACTATGAATATGTGTTCCAAGTGCCACAAGGATTTGATGTTGAAACAAGATCATGCTCAATTGAGTGCTTCAACTATTGGAAGTATCATGAATGGATCGTCTACTTCTAACCAAAATGAACCCTTTGTCACCGCCAGTGTCGATGTGCAAGTTAGTTTGGCGGAACCTAAGATCATCTCAGTGCAGGCATCTCCTATGGTTTCTGAAGGGAGCAGTGAAGTGAAGCCTAAGGACAGACCTAGACGTTGCAACAGTTGCAACAAGCGAGTCGGATTAATGGGATTCGACTGTCGTTGTGGTAATATCTTCTGTGCTATTCATCGTTACTCCGACAAACACAATTGCCCCTTTGATTATCGCACCTCTGCACAGGATGCAATTGCTAAAGCCAACCCCATTGTGAAGGCGGAGAAGCTCGATAAGATCTAG
Protein sequence
MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMNGSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPMVSEGSSEVKPKDRPRRCNSCNKRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI
Homology
BLAST of CmaCh11G008400 vs. ExPASy Swiss-Prot
Match:
A2YEZ6 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica OX=39946 GN=SAP8 PE=2 SV=2)
HSP 1 Score: 215.7 bits (548), Expect = 4.1e-55
Identity = 107/175 (61.14%), Postives = 134/175 (76.57%), Query Frame = 0
Query: 1 MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMN 60
MEH E CQ PEGP LCINNCGFFGSAATMNMCSKCHK++++KQ+ A+L+AS+I SI+N
Sbjct: 1 MEHKETGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN 60
Query: 61 GSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPMV--SEGSSEVKPKDR--PRRCNSCN 120
G + EP + +V V+ E K + Q + + SEG + V PK R P RC++C
Sbjct: 61 GGDSG--KEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVT-VNPKGREGPNRCSTCR 120
Query: 121 KRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
KRVGL GF+CRCGN++CA+HRYSDKH+C FDYRT+A+DAIAKANP+VKAEKLDKI
Sbjct: 121 KRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
BLAST of CmaCh11G008400 vs. ExPASy Swiss-Prot
Match:
A3BDI8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP8 PE=2 SV=1)
HSP 1 Score: 215.7 bits (548), Expect = 4.1e-55
Identity = 107/175 (61.14%), Postives = 134/175 (76.57%), Query Frame = 0
Query: 1 MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMN 60
MEH E CQ PEGP LCINNCGFFGSAATMNMCSKCHK++++KQ+ A+L+AS+I SI+N
Sbjct: 1 MEHKETGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVN 60
Query: 61 GSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPMV--SEGSSEVKPKDR--PRRCNSCN 120
G + EP + +V V+ E K + Q + + SEG + V PK R P RC++C
Sbjct: 61 GGDSG--KEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVT-VNPKGREGPNRCSTCR 120
Query: 121 KRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
KRVGL GF+CRCGN++CA+HRYSDKH+C FDYRT+A+DAIAKANP+VKAEKLDKI
Sbjct: 121 KRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171
BLAST of CmaCh11G008400 vs. ExPASy Swiss-Prot
Match:
Q6H7P8 (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=SAP4 PE=2 SV=1)
HSP 1 Score: 212.2 bits (539), Expect = 4.5e-54
Identity = 106/175 (60.57%), Postives = 132/175 (75.43%), Query Frame = 0
Query: 1 MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMN 60
MEH EA CQ PEGP LCINNCGFFGSAATMNMCSKCHK++++K++ A+L+AS+I SI+N
Sbjct: 1 MEHKEAGCQ-QPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKEEQAKLAASSIDSIVN 60
Query: 61 GSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPMVSEGSSEV----KPKDRPRRCNSCN 120
G ++ + S V V+ E K + VQ + V+ S EV K K+ P RC +C
Sbjct: 61 GCDGGKEHIVAASGSTAVAVAQVEAKTLVVQPTD-VAGTSEEVAVVPKVKEGPNRCATCR 120
Query: 121 KRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
KRVGL GF+CRCGN++CA+HRYSDKH C FDYRT+A+DAIAKANP+VKAEKLDKI
Sbjct: 121 KRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173
BLAST of CmaCh11G008400 vs. ExPASy Swiss-Prot
Match:
Q8H0X0 (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=SAP2 PE=2 SV=2)
HSP 1 Score: 199.1 bits (505), Expect = 4.0e-50
Identity = 97/176 (55.11%), Postives = 120/176 (68.18%), Query Frame = 0
Query: 1 MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMN 60
M+HD+ CQ+PPEGP LC NNCGFFGSAATMNMCSKCHKD++ +Q+ AS +
Sbjct: 1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--T 60
Query: 61 GSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPM-----VSEGSSEVKPKDRPRRCNSC 120
SS++ E F A VD++ EP +SVQ S + V KPK P RC +C
Sbjct: 61 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKG-PSRCTTC 120
Query: 121 NKRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
NKRVGL GF CRCG++FC HRY+D H+C F+Y +AQ+AIAKANP+VKAEKLDKI
Sbjct: 121 NKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh11G008400 vs. ExPASy Swiss-Prot
Match:
Q94B40 (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana OX=3702 GN=SAP6 PE=2 SV=2)
HSP 1 Score: 145.6 bits (366), Expect = 5.2e-34
Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 0
Query: 4 DEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLS-ASTIGSIMNGS 63
+E CQ PE LC+NNCGF GS+ATMN+CS C+ DL LKQ S ST+ S ++ S
Sbjct: 3 EEHRCQT-PESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVS 62
Query: 64 STSNQNEPFVTASVDVQVSLAEPKIISVQASPMVSEGSSEVKPKDRPRRCNSCNKRVGLM 123
S+ + + + + K+ + ++S ++E + RP RC +C KRVGL
Sbjct: 63 PPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLT 122
Query: 124 GFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
GF CRCG +FC +HRY + H C +D++++ ++ IAKANP+VKA KL KI
Sbjct: 123 GFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170
BLAST of CmaCh11G008400 vs. TAIR 10
Match:
AT1G51200.1 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51
Identity = 97/176 (55.11%), Postives = 120/176 (68.18%), Query Frame = 0
Query: 1 MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMN 60
M+HD+ CQ+PPEGP LC NNCGFFGSAATMNMCSKCHKD++ +Q+ AS +
Sbjct: 1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--T 60
Query: 61 GSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPM-----VSEGSSEVKPKDRPRRCNSC 120
SS++ E F A VD++ EP +SVQ S + V KPK P RC +C
Sbjct: 61 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKG-PSRCTTC 120
Query: 121 NKRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
NKRVGL GF CRCG++FC HRY+D H+C F+Y +AQ+AIAKANP+VKAEKLDKI
Sbjct: 121 NKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh11G008400 vs. TAIR 10
Match:
AT1G51200.2 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51
Identity = 97/176 (55.11%), Postives = 120/176 (68.18%), Query Frame = 0
Query: 1 MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMN 60
M+HD+ CQ+PPEGP LC NNCGFFGSAATMNMCSKCHKD++ +Q+ AS +
Sbjct: 1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--T 60
Query: 61 GSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPM-----VSEGSSEVKPKDRPRRCNSC 120
SS++ E F A VD++ EP +SVQ S + V KPK P RC +C
Sbjct: 61 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKG-PSRCTTC 120
Query: 121 NKRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
NKRVGL GF CRCG++FC HRY+D H+C F+Y +AQ+AIAKANP+VKAEKLDKI
Sbjct: 121 NKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh11G008400 vs. TAIR 10
Match:
AT1G51200.3 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51
Identity = 97/176 (55.11%), Postives = 120/176 (68.18%), Query Frame = 0
Query: 1 MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMN 60
M+HD+ CQ+PPEGP LC NNCGFFGSAATMNMCSKCHKD++ +Q+ AS +
Sbjct: 1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--T 60
Query: 61 GSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPM-----VSEGSSEVKPKDRPRRCNSC 120
SS++ E F A VD++ EP +SVQ S + V KPK P RC +C
Sbjct: 61 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKG-PSRCTTC 120
Query: 121 NKRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
NKRVGL GF CRCG++FC HRY+D H+C F+Y +AQ+AIAKANP+VKAEKLDKI
Sbjct: 121 NKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh11G008400 vs. TAIR 10
Match:
AT1G51200.4 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 199.1 bits (505), Expect = 2.8e-51
Identity = 97/176 (55.11%), Postives = 120/176 (68.18%), Query Frame = 0
Query: 1 MEHDEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLSASTIGSIMN 60
M+HD+ CQ+PPEGP LC NNCGFFGSAATMNMCSKCHKD++ +Q+ AS +
Sbjct: 1 MDHDKTGCQSPPEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSG--T 60
Query: 61 GSSTSNQNEPFVTASVDVQVSLAEPKIISVQASPM-----VSEGSSEVKPKDRPRRCNSC 120
SS++ E F A VD++ EP +SVQ S + V KPK P RC +C
Sbjct: 61 SSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAAKPKG-PSRCTTC 120
Query: 121 NKRVGLMGFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
NKRVGL GF CRCG++FC HRY+D H+C F+Y +AQ+AIAKANP+VKAEKLDKI
Sbjct: 121 NKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
BLAST of CmaCh11G008400 vs. TAIR 10
Match:
AT3G52800.1 (A20/AN1-like zinc finger family protein )
HSP 1 Score: 145.6 bits (366), Expect = 3.7e-35
Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 0
Query: 4 DEASCQAPPEGPFLCINNCGFFGSAATMNMCSKCHKDLMLKQDHAQLS-ASTIGSIMNGS 63
+E CQ PE LC+NNCGF GS+ATMN+CS C+ DL LKQ S ST+ S ++ S
Sbjct: 3 EEHRCQT-PESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVS 62
Query: 64 STSNQNEPFVTASVDVQVSLAEPKIISVQASPMVSEGSSEVKPKDRPRRCNSCNKRVGLM 123
S+ + + + + K+ + ++S ++E + RP RC +C KRVGL
Sbjct: 63 PPSSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLT 122
Query: 124 GFDCRCGNIFCAIHRYSDKHNCPFDYRTSAQDAIAKANPIVKAEKLDKI 172
GF CRCG +FC +HRY + H C +D++++ ++ IAKANP+VKA KL KI
Sbjct: 123 GFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A2YEZ6 | 4.1e-55 | 61.14 | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza s... | [more] |
A3BDI8 | 4.1e-55 | 61.14 | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza s... | [more] |
Q6H7P8 | 4.5e-54 | 60.57 | Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza s... | [more] |
Q8H0X0 | 4.0e-50 | 55.11 | Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabido... | [more] |
Q94B40 | 5.2e-34 | 42.60 | Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabido... | [more] |