CmaCh11G007860 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G007860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Mitochondrial substrate carrier family protein
Location	Cma_Chr11: 3846828 .. 3851276 (-)
RNA-Seq Expression	CmaCh11G007860
Synteny	CmaCh11G007860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGGTTTTGGGGTTATTTTTAACAACATTTCTGTAAAAGGAATCAAATTTGGGGGAAAAAGCCAAGAAAAAATTGAAGAATTGCAACTGGGAATTAGCCATTTTCACCGATCGACGAGGACTCTGAGGTCCGCCATTAAAATCAACATCACCACCTTAAATTAAATTAATTGTTGGACAGTTGCCAATTGCCGCTGGTCGAGAGGGGAAGAAAGCAAGGGTTTTTGGTAATACACTTCACACTACTATAAAGTCTCATTTCCTTCACTGTTTTGTTCCTTCTCCTTTGCTCCAGCCATCGCGTTTTTTCGAACCCAGAAACCATTTTCGATTTCTTCTTCTCTCCCCCATTTGAGCTTTTTGTCTTAACTTTTCATTTCAGCAAATGGGTGACGAGAAGAAGCCTAAATCCCTTGGTGTTTGGCCCACCGTCAAGCCCTTCGTCAATGGAGGCCTCTCTGGTATGCTTGCGACTTGCGTCATTCAACCCATCGACATGATCAAGGTAACACAAATCTTCAGATTTACCTGCTACGTGTGAGGAATCATTGTGATTCAACCGGATTCTGTTGCTTGTTGGTTCGCTGAGATTTTGTTTTTCATTTTCGGATTGGAGTTTCTTGTTGGATTTTAGATCTAGGGTTTTTTAGGTTTTTTTTTTCTCTGTCCTTTGGCTGTTTTATGCGTTTTTGAGTTTATTTGTTGTTTTAATAATGTGTTCTTGATTTGGTTCAGGTGAGAATCCAGTTAGGTCAGGGCTCGGCAGGCGAGGTAACCAGGAACATGCTTAAGGCGGAGGGAGTTGGTGCCTTTTACAAGGTGAGTTTTCAAGATCCAGTTGAAGTTTGTGATTATTACTTGAAATGTACTGTGGTTCTTGTGGCGTGGAACATTGTAGAATACTGGCTTGGTATTAACTTTCTTGTTGATTATAAGATCTTGTCCCTTTGAGGTCTTTTGAGGAGCCAGGAAGGATATTCTGGTTTGGAGATTGGCTTATTGATCCGATTTGTGCTGATATTAATTGTAAATGGTGGATCAACTTTTATCCTATATTACAATCTTGTTTTCTGTTTAGAAAACTGTAAGAGATGTATGATTGTCGCCACCCACTTAGGATTTTAAGATCTTGTGAATTTTTTAGCAGCTAAATGTTGAAGCTTAGTTGGCTTGAACAGCTATGGATATCTATATATACATGTGAAAGATGTAGGTACTTTCTTTCGCTTGATTCATAGATGTTGTGATGTGTAACCAGGCGAACTTTGCTGCCTCTTCACTCTCCTTCAGATGATTATGATACTGAATCGTATCTCTTGTAGAGAGGTGCAGAAGCTCTCTCTTTGACTTAGGAGGGCATTCCACCACTTCGACTGGTGCGGATGCAGACATGGTTCCCTTGTCGTGAAGAATAATGAAAGGGAATCCCCTGGTCAAACCACCTTTGTTGTTGTCTGATAGCTTTATAGAGTAGAGATCTAGCAACGCATTTTAGGCACAGATCATTGGTATTGGATGCATTGTTGGGTTGTGCCAAGTTAAATTAGGTTCTTATTTTTCCGTTGTAGAAAAGAGATCCCTTCCCCCCGGTTTCTAAAATGAAAATTGGGTGTTTGGTGGTTAGGGATTGGGCAATTACTAGATCATTTGAAGGTTTCTTGTGTCGCTTGTATGTATGTTTTGCGTGTCCTTGGCTGCCTTCGACAAGTGAACTGACTAAACTAAGAGGAAAAATGGAACTTCGATCATTTTGGCTTGTATACTTTGCAATTCGTTGTGCATACTATAATCATGTTAGTTGCCTGCTTATTTATATTCTTCACAAGAAAACGACGTAAAATTTAATGTGCTGCATAATGTCGAGCAGGGTCTCTCTGCTGGGCTTCTTAGACAAGCTACCTATACTACTGCACGGCTTGGATCATTCAAGTGAGTTTTATGCTGAATTTTATCTTCGAAAAGTATAAGTTTCTTGTGTAATGAATTGTATTAATTGTTCAATGGATGTTCTTTTTCGTTCCTTCTGTAGGATTTTGACAAACAAAGCAATCGAAGCTAATGACGGCAAGCCCCTTCCTCTTTATCAAAAAGCTTTGTGTGGGTTAACAGCTGGTGCTATTGGAGCATCTTTTGGCAGCCCAGCAGATTTGGCGCTTATCCGAATGCAGGCTGATGCTACCCTCCCAGCTGCACAACGCAGACACTACAAAAATGCATTCCATGCACTGTATCGTATTGTTGGAGATGAGGGTGTTTTGGCTCTCTGGAAGGGTGCTGGTCCAACAGTAGTGAGAGCAATGGCGCTGAATATGGGCATGCTTGCCTCTTACGATCAAAGTGTTGAGTTTTTCAAGGATAACCTTGGTTTTGGTGAAGCTACGACGGTTATAGGTGAGATTCTTTGCCCATTTCATGATCGAATTTCTTCAGAATTCATTCTAAATCTTGTTATACACTTTGTATATTTCATGTTCTATGCATTGTTCATCTTTATTCTATTTTTCAAAACTGGAAACTTGTTCCGCTTTTGGCGTCTACATCACTTAGTCAATGAAAATTATGGAACTTTCTAGGTTCGGCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGCTTTCTCTCTCGGGCTTCCCCTTAAGGTTTTTATAATAGGTTTGCTAGGTAGAGGTTTTCACACCCTTATAAAGAATGTTTCGTTCTCCTTCCGAACCGATGTGGGATCTCACAATCCACTCTCTTCGAGGCCAGCATATTCGCTAGCACTTGTTCCCTTCTCCAATCGATGTGGGACCCCCAATCCACCCCTTTCGGCCCAGCGTCCTTTCTGGCACATCGTCTTGTGTCCACCCCTTCGAGCTCAGCCTCCTTGCTGGCACATCGCCTGGTGTTTGGCTCTGATACCATTTGTAATGGCCCAAGCCCACCTCTAGCAAATATTGTCTTCCTTGGTCTCTCCCTTTCGAGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGCCAGGGAGAAGTTTCCACACCCTTATAAAGAATATTTTGTTCTCCTCCCCAACCGACGTGGGATCTCACAATACACCCCATTCGGGCCCCAACATCCTTGCTGGCACATTGTCTTGTGTCCACCCCCCTTCGGGCTCAGTCTCCTTGCTAGCATATTGCCTGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAAGCCCACTGCTAACATATATTGTTCTCTTTGGGCTTTCTCTCAAGGTTTTTAAAGCGCATCTAGGGAGAGGTGTCCACATCCTTATAAAGAATGTTTTGTTCTCCTCCTCAACTCATGGGATTTCTGATTCAGGGGTTTGAATGCTTATTATGTGTTTCATTGATTGACATGTTGTTTCCATTCTTGCCTACTTTCAGGTGCAAGTGCTGTTTCAGGATTCTTTGCTTCAGCTTGCAGTTTGCCATTTGATTACGTGAAGACTCAGATTCAGAAAATGCAGCCTGATGCTGAAGGGAAGCTTCCTTACTCTGGCTCTATGGATTGTGCCATGAAGACCTTGAAATCTGGCGGGCCGTTGAAATTTTACACTGGCTTCCCTGTTTACTGTATTAGGATTGCTCCACACGTCATGGTACGATCTCTTGCCTGCCCCCCGTTTTCTATTTTATTTTCATCCCGATCTGCCCTCGGAGCTAAGTAAAGCCTCACCAAGATTGGGGATAGGGAGATAGATGATTATTTATCAAGATTTTACTTCTAATATTATGATATACGACAATGCAGATGACATGGATTTTCCTCAACCAAGTTCAAAAGTTCGAGAAGACCATTGGACTTTGAGCTCTGGAACGACGGGGTTTCATCTCGACCTGAACAATCTTTAGGAGCGTTTCTTGCCCTCTTCAAGGTGGGCTATGTTGTGGTTCTTCATCTTGACAGAAATCGCGCCCGTAAAAGTTAGACTTATTATTATTATCACTATTTTTTATCGCAAGATCGACATGATAGAGTTGAGGGACTAAACTGTGGTATTGATTTCGGGTTGCGATTGGCTTATAGGATTGTTAAAGATTGAAAATTTAGGATTGCTTTTGGTTCAGGAATCAGTGAGGGGACACATTGATTTGATCAAAATAAAGTTTGGGGGTACTCTTTTTGTTTGACAAAAGGGATGCTGATATCAGTTTTGTCTAACTTGATTGTCTCAGAAACCATCAAGTTTCTGCATTAAATTTGATAAACTCTCTCTCTCTCTCTCTCTCCCTCTCCCTCCTGTTAGGATCATGTTCTTCTCAGGCTGATGCCCTGTTTTGGATGAACAATCCTTTGGTCTGTGGCAATATCAGGAACTTGCTACCATGTGATTTTCGTTCTTTGTTCTAACAGATGGCGGGTTCTTTGTTCTAAGGTAATAGATATCTTATCCACGGAAATCATATATGTATTGTTTTGTTGTTGTTGAAGTTGTGTGGTTAG

mRNA sequence

AAAGGGTTTTGGGGTTATTTTTAACAACATTTCTGTAAAAGGAATCAAATTTGGGGGAAAAAGCCAAGAAAAAATTGAAGAATTGCAACTGGGAATTAGCCATTTTCACCGATCGACGAGGACTCTGAGGTCCGCCATTAAAATCAACATCACCACCTTAAATTAAATTAATTGTTGGACAGTTGCCAATTGCCGCTGGTCGAGAGGGGAAGAAAGCAAGGGTTTTTGCAAATGGGTGACGAGAAGAAGCCTAAATCCCTTGGTGTTTGGCCCACCGTCAAGCCCTTCGTCAATGGAGGCCTCTCTGGTATGCTTGCGACTTGCGTCATTCAACCCATCGACATGATCAAGGTGAGAATCCAGTTAGGTCAGGGCTCGGCAGGCGAGGTAACCAGGAACATGCTTAAGGCGGAGGGAGTTGGTGCCTTTTACAAGGGTCTCTCTGCTGGGCTTCTTAGACAAGCTACCTATACTACTGCACGGCTTGGATCATTCAAGATTTTGACAAACAAAGCAATCGAAGCTAATGACGGCAAGCCCCTTCCTCTTTATCAAAAAGCTTTGTGTGGGTTAACAGCTGGTGCTATTGGAGCATCTTTTGGCAGCCCAGCAGATTTGGCGCTTATCCGAATGCAGGCTGATGCTACCCTCCCAGCTGCACAACGCAGACACTACAAAAATGCATTCCATGCACTGTATCGTATTGTTGGAGATGAGGGTGTTTTGGCTCTCTGGAAGGGTGCTGGTCCAACAGTAGTGAGAGCAATGGCGCTGAATATGGGCATGCTTGCCTCTTACGATCAAAGTGTTGAGTTTTTCAAGGATAACCTTGGTTTTGGTGAAGCTACGACGGTTATAGGTGCAAGTGCTGTTTCAGGATTCTTTGCTTCAGCTTGCAGTTTGCCATTTGATTACGTGAAGACTCAGATTCAGAAAATGCAGCCTGATGCTGAAGGGAAGCTTCCTTACTCTGGCTCTATGGATTGTGCCATGAAGACCTTGAAATCTGGCGGGCCGTTGAAATTTTACACTGGCTTCCCTGTTTACTGTATTAGGATTGCTCCACACGTCATGTTGTGTGGTTAG

Coding sequence (CDS)

ATGGGTGACGAGAAGAAGCCTAAATCCCTTGGTGTTTGGCCCACCGTCAAGCCCTTCGTCAATGGAGGCCTCTCTGGTATGCTTGCGACTTGCGTCATTCAACCCATCGACATGATCAAGGTGAGAATCCAGTTAGGTCAGGGCTCGGCAGGCGAGGTAACCAGGAACATGCTTAAGGCGGAGGGAGTTGGTGCCTTTTACAAGGGTCTCTCTGCTGGGCTTCTTAGACAAGCTACCTATACTACTGCACGGCTTGGATCATTCAAGATTTTGACAAACAAAGCAATCGAAGCTAATGACGGCAAGCCCCTTCCTCTTTATCAAAAAGCTTTGTGTGGGTTAACAGCTGGTGCTATTGGAGCATCTTTTGGCAGCCCAGCAGATTTGGCGCTTATCCGAATGCAGGCTGATGCTACCCTCCCAGCTGCACAACGCAGACACTACAAAAATGCATTCCATGCACTGTATCGTATTGTTGGAGATGAGGGTGTTTTGGCTCTCTGGAAGGGTGCTGGTCCAACAGTAGTGAGAGCAATGGCGCTGAATATGGGCATGCTTGCCTCTTACGATCAAAGTGTTGAGTTTTTCAAGGATAACCTTGGTTTTGGTGAAGCTACGACGGTTATAGGTGCAAGTGCTGTTTCAGGATTCTTTGCTTCAGCTTGCAGTTTGCCATTTGATTACGTGAAGACTCAGATTCAGAAAATGCAGCCTGATGCTGAAGGGAAGCTTCCTTACTCTGGCTCTATGGATTGTGCCATGAAGACCTTGAAATCTGGCGGGCCGTTGAAATTTTACACTGGCTTCCCTGTTTACTGTATTAGGATTGCTCCACACGTCATGTTGTGTGGTTAG

Protein sequence

MGDEKKPKSLGVWPTVKPFVNGGLSGMLATCVIQPIDMIKVRIQLGQGSAGEVTRNMLKAEGVGAFYKGLSAGLLRQATYTTARLGSFKILTNKAIEANDGKPLPLYQKALCGLTAGAIGASFGSPADLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDNLGFGEATTVIGASAVSGFFASACSLPFDYVKTQIQKMQPDAEGKLPYSGSMDCAMKTLKSGGPLKFYTGFPVYCIRIAPHVMLCG

Homology

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BLAST of CmaCh11G007860 vs. ExPASy Swiss-Prot
Match: Q9C5M0 (Mitochondrial dicarboxylate/tricarboxylate transporter DTC OS=Arabidopsis thaliana OX=3702 GN=DTC PE=1 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.1e-134
Identity = 235/279 (84.23%), Postives = 253/279 (90.68%), Query Frame = 0


Query: 4   EKKPKSLGVWPTVKPFVNGGLSGMLATCVIQPIDMIKVRIQLGQGSAGEVTRNMLKAEGV 63
           E+K   + VW TVKPFVNGG SGMLATCVIQPIDMIKVRIQLGQGSA  +T NMLK EGV
Sbjct: 3   EEKKAPISVWTTVKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAASITTNMLKNEGV 62

Query: 64  GAFYKGLSAGLLRQATYTTARLGSFKILTNKAIEANDGKPLPLYQKALCGLTAGAIGASF 123
           GAFYKGLSAGLLRQATYTTARLGSFK+LT KAIE+NDGKPLPLYQKALCGLTAGAIGA  
Sbjct: 63  GAFYKGLSAGLLRQATYTTARLGSFKLLTAKAIESNDGKPLPLYQKALCGLTAGAIGACV 122

Query: 124 GSPADLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLALWKGAGPTVVRAMALNM 183
           GSPADLALIRMQAD TLP AQRR+Y NAFHAL RI  DEGVLALWKG GPTVVRAMALNM
Sbjct: 123 GSPADLALIRMQADNTLPLAQRRNYTNAFHALTRISADEGVLALWKGCGPTVVRAMALNM 182

Query: 184 GMLASYDQSVEFFKDNLGFGEATTVIGASAVSGFFASACSLPFDYVKTQIQKMQPDAEGK 243
           GMLASYDQS E+ +DNLGFGE +TV+GASAVSGF A+ACSLPFD+VKTQIQKMQPDA+GK
Sbjct: 183 GMLASYDQSAEYMRDNLGFGEMSTVVGASAVSGFCAAACSLPFDFVKTQIQKMQPDAQGK 242

Query: 244 LPYSGSMDCAMKTLKSGGPLKFYTGFPVYCIRIAPHVML 283
            PY+GS+DCAMKTLK GGPLKFY+GFPVYC+RIAPHVM+
Sbjct: 243 YPYTGSLDCAMKTLKEGGPLKFYSGFPVYCVRIAPHVMM 281

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BLAST of CmaCh11G007860 vs. ExPASy Swiss-Prot
Match: P0C582 (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mic-33 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.3e-68
Identity = 140/275 (50.91%), Postives = 178/275 (64.73%), Query Frame = 0


Query: 18  PFVNGGLSGMLATCVIQPIDMIKVRIQL-GQGSAG-------EVTRNMLKAEGVGAFYKG 77
           PF+NGGLSGM+AT VIQPIDMIKVRIQL G+G AG        VTR+++ +      Y G
Sbjct: 44  PFINGGLSGMVATTVIQPIDMIKVRIQLAGEGKAGGPKPTPLGVTRDIIASGKAMDLYTG 103

Query: 78  LSAGLLRQATYTTARLGSFKILTNK--AIEANDGKPLPLYQKALCGLTAGAIGASFGSPA 137
           LSAGLLRQA YTTAR+G F    ++  A     G+ +   ++A  GL AG + A  G+PA
Sbjct: 104 LSAGLLRQAVYTTARIGCFDTFMSRLSARAKEKGQSVGFKERASAGLAAGGLAAMIGNPA 163

Query: 138 DLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLALWKGAGPTVVRAMALNMGMLA 197
           DLALIRMQ+D   P A+R++YK+   AL  I  +EGV ALW GA PTVVRAMALN G LA
Sbjct: 164 DLALIRMQSDGLKPVAERKNYKSVIDALGGIARNEGVAALWAGAAPTVVRAMALNFGQLA 223

Query: 198 SYDQSVEFFKDNLGFGEATTVIGASAVSGFFASACSLPFDYVKTQIQKMQPDAEGKLPYS 257
            + ++    K    +      + ASA++GFFAS  SLPFD+VKT++QK     +GKLPY+
Sbjct: 224 FFSEAKAQLKARTQWSSKVQTLSASAIAGFFASFFSLPFDFVKTRLQKQTRGPDGKLPYN 283

Query: 258 GSMDCAMKTLKSGGPLKFYTGFPVYCIRIAPHVML 283
           G +DC  K  K  G  +FY GF  Y +RIAPH M+
Sbjct: 284 GMVDCFAKVAKQEGVFRFYRGFGTYYVRIAPHAMV 318

[Close]

BLAST of CmaCh11G007860 vs. ExPASy Swiss-Prot
Match: Q54PY7 (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum OX=44689 GN=ucpC PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.1e-56
Identity = 120/276 (43.48%), Postives = 166/276 (60.14%), Query Frame = 0


Query: 16  VKPFVNGGLSGMLATCVIQPIDMIKVRIQL-GQGSAGEVTRNMLK-------AEGVGAFY 75
           +K FV GGL+GML++    PID +KVR+QL G+G+     R  LK        EG    Y
Sbjct: 25  LKQFVIGGLAGMLSSAFTHPIDSLKVRMQLQGEGTGVGPKRGALKMLVHINQTEGFFTLY 84

Query: 76  KGLSAGLLRQATYTTARLGSFKILTNKAIEANDGKPLPLYQKALCGLTAGAIGASFGSPA 135
           KGLSA LLRQATYTT R G + ++  K I A D KPLP  QK + G+ +GA GA  G+PA
Sbjct: 85  KGLSASLLRQATYTTTRFGLYDLI--KDIVAKDDKPLPFTQKIMVGMLSGAGGAIVGTPA 144

Query: 136 DLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLALWKGAGPTVVRAMALNMGMLA 195
           DL ++RMQAD  LP   RR+YKN F  ++RI  +EG+++LWKG  P ++RAM +  G ++
Sbjct: 145 DLTMVRMQADGKLPFNLRRNYKNVFDGIFRISKEEGIISLWKGCSPNLIRAMFMTAGQVS 204

Query: 196 SYDQSVEFFKDNLGF-GEATTVIGASAVSGFFASACSLPFDYVKTQIQKMQPDAEGKLPY 255
           SYDQ+ +    +  F  +  T + AS  + F A+  + P D +KT+I        G+L Y
Sbjct: 205 SYDQTKQLMLASGYFHDDIKTHLIASTTAAFVAAVATSPLDVIKTRIMNSPKTVTGELQY 264

Query: 256 SGSMDCAMKTLKSGGPLKFYTGFPVYCIRIAPHVML 283
            G+ DC  KTL++ G   FY GF  Y +R+ P  +L
Sbjct: 265 KGTFDCLSKTLRAEGFKAFYKGFNPYFMRLGPQTIL 298

[Close]

BLAST of CmaCh11G007860 vs. ExPASy Swiss-Prot
Match: Q02978 (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens OX=9606 GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 218.8 bits (556), Expect = 8.0e-56
Identity = 129/290 (44.48%), Postives = 174/290 (60.00%), Query Frame = 0


Query: 2   GDEKKPKSLGVWPTVKPFVNGGLSGMLATCVIQPIDMIKVRIQL-GQG-------SAGEV 61
           G + KP++    P    F+ GGL+GM AT  +QP+D++K R+QL G+G       ++   
Sbjct: 11  GIDGKPRTS---PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHA 70

Query: 62  TRNMLKAEGVGAFYKGLSAGLLRQATYTTARLGSFKILTNKAIEANDGKPLPLYQKALCG 121
             ++LKAEG+   Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KA+ G
Sbjct: 71  LTSILKAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKAVIG 130

Query: 122 LTAGAIGASFGSPADLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLALWKGAGP 181
           +TAGA GA  G+PA++ALIRM AD  LPA QRR YKN F+AL RI  +EGVL LW+G  P
Sbjct: 131 MTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITREEGVLTLWRGCIP 190

Query: 182 TVVRAMALNMGMLASYDQSVEFFKDNLGFGEATTV-IGASAVSGFFASACSLPFDYVKTQ 241
           T+ RA+ +N   LASY QS +F  D+  F +       AS +SG   +A S+P D  KT+
Sbjct: 191 TMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIAKTR 250

Query: 242 IQKMQPDAEGKLPYSGSMDCAMKTLKSGGPLKFYTGFPVYCIRIAPHVML 283
           IQ M+   +GK  Y   +D   K ++  G    + GF  Y  R+ PH +L
Sbjct: 251 IQNMRM-IDGKPEYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVL 295

[Close]

BLAST of CmaCh11G007860 vs. ExPASy Swiss-Prot
Match: P22292 (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus OX=9913 GN=SLC25A11 PE=1 SV=3)

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-55
Identity = 128/290 (44.14%), Postives = 176/290 (60.69%), Query Frame = 0


Query: 2   GDEKKPKSLGVWPTVKPFVNGGLSGMLATCVIQPIDMIKVRIQL-GQGSAGEVTR----- 61
           G + KP++    P    F+ GGL+GM AT  +QP+D++K R+QL G+G+     +     
Sbjct: 11  GMDGKPRTS---PKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGEGAKTREYKTSFHA 70

Query: 62  --NMLKAEGVGAFYKGLSAGLLRQATYTTARLGSFKILTNKAIEANDGKPLPLYQKALCG 121
             ++L+AEG+   Y GLSAGLLRQATYTT RLG + +L  +   A DG P     KA+ G
Sbjct: 71  LISILRAEGLRGIYTGLSAGLLRQATYTTTRLGIYTVLFERLTGA-DGTPPGFLLKAVIG 130

Query: 122 LTAGAIGASFGSPADLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLALWKGAGP 181
           +TAGA GA  G+PA++ALIRM AD  LP  QRR YKN F+AL+RIV +EGV  LW+G  P
Sbjct: 131 MTAGATGAFVGTPAEVALIRMTADGRLPVDQRRGYKNVFNALFRIVQEEGVPTLWRGCIP 190

Query: 182 TVVRAMALNMGMLASYDQSVEFFKDNLGFGEATTV-IGASAVSGFFASACSLPFDYVKTQ 241
           T+ RA+ +N   LASY QS +F  D+  F +       AS +SG   +A S+P D VKT+
Sbjct: 191 TMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAASMPVDIVKTR 250

Query: 242 IQKMQPDAEGKLPYSGSMDCAMKTLKSGGPLKFYTGFPVYCIRIAPHVML 283
           IQ M+   +GK  Y   +D  +K ++  G    + GF  Y  R+ PH +L
Sbjct: 251 IQNMRM-IDGKPEYKNGLDVLVKVVRYEGFFSLWKGFTPYYARLGPHTVL 295

[Close]

BLAST of CmaCh11G007860 vs. TAIR 10
Match: AT5G19760.1 (Mitochondrial substrate carrier family protein )

HSP 1 Score: 480.7 bits (1236), Expect = 8.0e-136
Identity = 235/279 (84.23%), Postives = 253/279 (90.68%), Query Frame = 0


Query: 4   EKKPKSLGVWPTVKPFVNGGLSGMLATCVIQPIDMIKVRIQLGQGSAGEVTRNMLKAEGV 63
           E+K   + VW TVKPFVNGG SGMLATCVIQPIDMIKVRIQLGQGSA  +T NMLK EGV
Sbjct: 3   EEKKAPISVWTTVKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAASITTNMLKNEGV 62

Query: 64  GAFYKGLSAGLLRQATYTTARLGSFKILTNKAIEANDGKPLPLYQKALCGLTAGAIGASF 123
           GAFYKGLSAGLLRQATYTTARLGSFK+LT KAIE+NDGKPLPLYQKALCGLTAGAIGA  
Sbjct: 63  GAFYKGLSAGLLRQATYTTARLGSFKLLTAKAIESNDGKPLPLYQKALCGLTAGAIGACV 122

Query: 124 GSPADLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLALWKGAGPTVVRAMALNM 183
           GSPADLALIRMQAD TLP AQRR+Y NAFHAL RI  DEGVLALWKG GPTVVRAMALNM
Sbjct: 123 GSPADLALIRMQADNTLPLAQRRNYTNAFHALTRISADEGVLALWKGCGPTVVRAMALNM 182

Query: 184 GMLASYDQSVEFFKDNLGFGEATTVIGASAVSGFFASACSLPFDYVKTQIQKMQPDAEGK 243
           GMLASYDQS E+ +DNLGFGE +TV+GASAVSGF A+ACSLPFD+VKTQIQKMQPDA+GK
Sbjct: 183 GMLASYDQSAEYMRDNLGFGEMSTVVGASAVSGFCAAACSLPFDFVKTQIQKMQPDAQGK 242

Query: 244 LPYSGSMDCAMKTLKSGGPLKFYTGFPVYCIRIAPHVML 283
            PY+GS+DCAMKTLK GGPLKFY+GFPVYC+RIAPHVM+
Sbjct: 243 YPYTGSLDCAMKTLKEGGPLKFYSGFPVYCVRIAPHVMM 281

[Close]

BLAST of CmaCh11G007860 vs. TAIR 10
Match: AT4G24570.1 (dicarboxylate carrier 2 )

HSP 1 Score: 189.9 bits (481), Expect = 2.8e-48
Identity = 117/296 (39.53%), Postives = 162/296 (54.73%), Query Frame = 0


Query: 16  VKPFVNGGLSGMLATCVIQPIDMIKVRIQLGQGSAGEVTR-------------------- 75
           VK FV GG++ ++A C   P+D+IKVR+QL  G A   T                     
Sbjct: 3   VKSFVEGGIASVIAGCSTHPLDLIKVRLQL-HGEAPSTTTVTLLRPALAFPNSSPAAFLE 62

Query: 76  ---------------NMLKAEGVGAFYKGLSAGLLRQATYTTARLGSFKILTNKAIEAND 135
                          N++K+EG  A + G+SA LLRQ  Y+T R+G +++L NK  +   
Sbjct: 63  TTSSVPKVGPISLGINIVKSEGAAALFSGVSATLLRQTLYSTTRMGLYEVLKNKWTDPES 122

Query: 136 GKPLPLYQKALCGLTAGAIGASFGSPADLALIRMQADATLPAAQRRHYKNAFHALYRIVG 195
           GK L L +K   GL AG IGA+ G+PAD+A++RMQAD  LP AQRR+Y     A+  +V 
Sbjct: 123 GK-LNLSRKIGAGLVAGGIGAAVGNPADVAMVRMQADGRLPLAQRRNYAGVGDAIRSMVK 182

Query: 196 DEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDN--LGFGEATTVIGASAVSGFF 255
            EGV +LW+G+  T+ RAM +    LASYDQ  E   +N  +  G  T V+ AS  +GF 
Sbjct: 183 GEGVTSLWRGSALTINRAMIVTAAQLASYDQFKEGILENGVMNDGLGTHVV-ASFAAGFV 242

Query: 256 ASACSLPFDYVKTQIQKMQPDAEGKLPYSGSMDCAMKTLKSGGPLKFYTGF-PVYC 274
           AS  S P D +KT++  M+  A     Y G+ DCA+KT+K+ G +  Y GF P  C
Sbjct: 243 ASVASNPVDVIKTRVMNMKVGA-----YDGAWDCAVKTVKAEGAMALYKGFVPTVC 290

[Close]

BLAST of CmaCh11G007860 vs. TAIR 10
Match: AT2G22500.1 (uncoupling protein 5 )

HSP 1 Score: 186.8 bits (473), Expect = 2.4e-47
Identity = 109/301 (36.21%), Postives = 165/301 (54.82%), Query Frame = 0


Query: 16  VKPFVNGGLSGMLATCVIQPIDMIKVRIQLGQGSAGEVTRN------------------- 75
           +K F  GG++ ++A C   P+D+IKVR+QL QG +  +  N                   
Sbjct: 3   LKGFAEGGIASIVAGCSTHPLDLIKVRMQL-QGESAPIQTNLRPALAFQTSTTVNAPPLR 62

Query: 76  ---------MLKAEGVGAFYKGLSAGLLRQATYTTARLGSFKILTNKAIEANDGKPLPLY 135
                    +++ EG+ A + G+SA +LRQ  Y+T R+G + I+  +  +  + K +PL 
Sbjct: 63  VGVIGVGSRLIREEGMRALFSGVSATVLRQTLYSTTRMGLYDIIKGEWTDP-ETKTMPLM 122

Query: 136 QKALCGLTAGAIGASFGSPADLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLAL 195
           +K   G  AGAIGA+ G+PAD+A++RMQAD  LP   RR+YK+   A+ +++  EGV +L
Sbjct: 123 KKIGAGAIAGAIGAAVGNPADVAMVRMQADGRLPLTDRRNYKSVLDAITQMIRGEGVTSL 182

Query: 196 WKGAGPTVVRAMALNMGMLASYDQSVE------FFKDNLGFGEATTVIGASAVSGFFASA 255
           W+G+  T+ RAM +    LASYD   E        KD LG     T + AS  +GF AS 
Sbjct: 183 WRGSSLTINRAMLVTSSQLASYDSVKETILEKGLLKDGLG-----THVSASFAAGFVASV 242

Query: 256 CSLPFDYVKTQIQKMQPDAEGKLPYSGSMDCAMKTLKSGGPLKFYTGFPVYCIRIAPHVM 283
            S P D +KT++  M+  A    PY G++DCA+KT+K+ G +  Y GF     R AP  +
Sbjct: 243 ASNPVDVIKTRVMNMKVVAGVAPPYKGAVDCALKTVKAEGIMSLYKGFIPTVSRQAPFTV 296

[Close]

BLAST of CmaCh11G007860 vs. TAIR 10
Match: AT5G09470.1 (dicarboxylate carrier 3 )

HSP 1 Score: 152.5 bits (384), Expect = 5.0e-37
Identity = 105/326 (32.21%), Postives = 153/326 (46.93%), Query Frame = 0


Query: 17  KPFVNGGLSGMLATCVIQPIDMIKVRIQL-GQGSAG------------------------ 76
           KPF+ GG++ ++A  +  P+D+IKVR+QL G+ S                          
Sbjct: 4   KPFLEGGIAAIIAGALTHPLDLIKVRMQLQGEHSFSLDQNPNPNLSLDHNLPVKPYRPVF 63

Query: 77  ------------------------------EVTRNMLKAEGVGAFYKGLSAGLLRQATYT 136
                                          V  +++K EG  A + G+SA +LRQ  Y+
Sbjct: 64  ALDSLIGSISLLPLHIHAPSSSTRSVMTPFAVGAHIVKTEGPAALFSGVSATILRQMLYS 123

Query: 137 TARLGSFKILTNKAIEANDGKPLPLYQKALCGLTAGAIGASFGSPADLALIRMQADATLP 196
             R+G +  L  +  +   G   PL  K   GL AGA+G+  G+PAD+A++RMQAD +LP
Sbjct: 124 ATRMGIYDFLKRRWTDQLTGN-FPLVTKITAGLIAGAVGSVVGNPADVAMVRMQADGSLP 183

Query: 197 AAQRRHYKNAFHALYRIVGDEGVLALWKGAGPTVVRAMALNMGMLASYDQSVEFFKDNLG 256
             +RR+YK+   A+ RI   EGV +LW+G+  TV RAM +    LA+YD   E     + 
Sbjct: 184 LNRRRNYKSVVDAIDRIARQEGVSSLWRGSWLTVNRAMIVTASQLATYDHVKEIL---VA 243

Query: 257 FGEAT-----TVIGASAVSGFFASACSLPFDYVKTQIQKMQPDAEGKLPYSGSMDCAMKT 283
            G  T     T + AS  +G  A+  S P D VKT++  M  D E    Y G +DCA+K 
Sbjct: 244 GGRGTPGGIGTHVAASFAAGIVAAVASNPIDVVKTRM--MNADKE---IYGGPLDCAVKM 303

[Close]

BLAST of CmaCh11G007860 vs. TAIR 10
Match: AT3G54110.1 (plant uncoupling mitochondrial protein 1 )

HSP 1 Score: 148.3 bits (373), Expect = 9.4e-36
Identity = 98/266 (36.84%), Postives = 137/266 (51.50%), Query Frame = 0


Query: 17  KPFVNGGLSGMLATCVIQPIDMIKVRIQLGQGS-AGEVT----RNML-------KAEGVG 76
           K F     +  +      P+D  KVR+QL + + AG+VT    R +L       + EG+ 
Sbjct: 13  KTFACSAFAACVGEVCTIPLDTAKVRLQLQKSALAGDVTLPKYRGLLGTVGTIAREEGLR 72

Query: 77  AFYKGLSAGLLRQATYTTARLGSFKILTNKAIEANDGKPLPLYQKALCGLTAGAIGASFG 136
           + +KG+  GL RQ  +   R+G ++ + N  +  +    +PL +K L GLT GA+G    
Sbjct: 73  SLWKGVVPGLHRQCLFGGLRIGMYEPVKNLYVGKDFVGDVPLSKKILAGLTTGALGIMVA 132

Query: 137 SPADLALIRMQADATLPAAQRRHYKNAFHALYRIVGDEGVLALWKGAGPTVVRAMALNMG 196
           +P DL  +R+QA+  L A   R Y  A +A   IV  EGV ALW G GP V R   +N  
Sbjct: 133 NPTDLVKVRLQAEGKLAAGAPRRYSGALNAYSTIVRQEGVRALWTGLGPNVARNAIINAA 192

Query: 197 MLASYDQSVEFFKDNLGFGE-ATTVIGASAVSGFFASACSLPFDYVKTQIQKMQPDAEGK 256
            LASYDQ  E      GF +   T I +   +GFFA     P D VK+   +M  D+   
Sbjct: 193 ELASYDQVKETILKIPGFTDNVVTHILSGLGAGFFAVCIGSPVDVVKS---RMMGDSGA- 252

Query: 257 LPYSGSMDCAMKTLKSGGPLKFYTGF 270
             Y G++DC +KTLKS GP+ FY GF
Sbjct: 253 --YKGTIDCFVKTLKSDGPMAFYKGF 272

The following BLAST results are available for this feature:

BLAST of CmaCh11G007860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5M0	1.1e-134	84.23	Mitochondrial dicarboxylate/tricarboxylate transporter DTC OS=Arabidopsis thalia...	[more]
P0C582	5.3e-68	50.91	Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crass...	[more]
Q54PY7	6.1e-56	43.48	Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium di...	[more]
Q02978	8.0e-56	44.48	Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens OX=9606 GN=S...	[more]
P22292	1.4e-55	44.14	Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus OX=9913 GN=SLC...	[more]

BLAST of CmaCh11G007860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19760.1	8.0e-136	84.23	Mitochondrial substrate carrier family protein	[more]
AT4G24570.1	2.8e-48	39.53	dicarboxylate carrier 2	[more]
AT2G22500.1	2.4e-47	36.21	uncoupling protein 5	[more]
AT5G09470.1	5.0e-37	32.21	dicarboxylate carrier 3	[more]
AT3G54110.1	9.4e-36	36.84	plant uncoupling mitochondrial protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002067	Mitochondrial carrier protein	PRINTS	PR00926	MITOCARRIER	coord: 212..234 score: 24.8 coord: 119..137 score: 28.9 coord: 18..31 score: 25.53 coord: 31..45 score: 30.71
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 210..282 e-value: 4.7E-11 score: 42.5 coord: 103..199 e-value: 1.4E-18 score: 66.6 coord: 15..92 e-value: 1.1E-14 score: 54.1
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 13..94 score: 19.359406
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 203..284 score: 13.03074
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 104..195 score: 23.414042
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	1.50.40.10	Mitochondrial carrier domain	coord: 16..283 e-value: 7.1E-67 score: 227.3
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	103506	Mitochondrial carrier	coord: 13..282
None	No IPR available	PANTHER	PTHR45618	MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED	coord: 1..282
None	No IPR available	PANTHER	PTHR45618:SF44	SUBFAMILY NOT NAMED	coord: 1..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G007860.1	CmaCh11G007860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015742	alpha-ketoglutarate transport
biological_process	GO:0071423	malate transmembrane transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015367	oxoglutarate:malate antiporter activity