CmaCh11G007610 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G007610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Eukaryotic translation initiation factor 3 subunit K
Location	Cma_Chr11: 3699427 .. 3702551 (+)
RNA-Seq Expression	CmaCh11G007610
Synteny	CmaCh11G007610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGGACGAAACCCTAAAATAGAGGATTCATCAACGTCCCCAATCGAGGGTTTCGAGCGGGAACCTCAGCACAAGTTGGAAGTGTATACTTCAACGAAGAAAAGCTTATCCGGATACCTAATCGGCGACGGAATCCGGTGGTATGGGAAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTTGAAAACTACGTAAATGAGCAGGTTTCTTTCTATCTCTGTCTTTTGTTTTCAGTTCGATTTGTAAATTTTTTATCTTCTTCTCGATTGTCTTTAAATTTATAATTGTTCGTTTGGATTGAGAAATCTATTGTCTTATTCTTGTTGGATTGAACGTTTGTGTTCCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGGTACTTGTTATTTACTAGATGTAAATTGTTTACTTTTGTTGTTTCTTATATTCTTGGCCCTGTTTGAATGTGCCTTCAGAAAACTTTTTATTTATGCTTTAGATAGATATTCGAATACTTCTTATATAATGCATTGGATGTGGACCTTGAAGCTTTTGTTTTTTGAACCTGTGTTTTTCTTTCATTCACGTGTTTAATCTTCTAGCAATACGTTATTGTTCGATTTACAGTTTGAGCCCGAAAGAATGAGTACGCAAATTGTGGCTCGCATCCTGGTCAAGGTATGTTTCTCTTTGAAATTTCTTTGCATATTGTGAAGAATGTAATTCATTTACCTGTTCATTAATTTTAATTTTGAGGGCTTTGTGCGAGGTGTGAATAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGGTATGTGTTAACTCTTTTGTACTTCACCAACCTTTAAGTTTCATTAATGTTGTTTTATTTCAAGATGTGTATGTCCTTTTAAATTTGATTGATCTGTAAGAAGAAACGATTAGGTTGCTCATTTTCTCAACAAATTGAATTGTGCCGTGTACACTTCGTTGTTCTTTTATGAGTTTTTTTTTAGACAAAATTAAGCTTTCATTAAGATCAATGAAAGCATGCCGAACAACGTTATCCTAGGAGGAGCTAGAAACCTATACTAGGGTAAAACCACATCAAATTTAATGGCTTCAATTTTTAATTATTATTACAAGGTCAATGTCTTGAGACTAATAGAAGATGTAATCCTAAGGAAAGATTTTAGAGTTGATTTTATTCCGAACAAAAACACTGCCACCGAGCATGTATACACTTTAGCTCATGATTTTCTTATTCTTTTCCATCTTGCCCCTTCAAGACCCCTTTTAAATATGTTGTTACAGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGGTATGCATGTTTTTTTTTTTTTACGTTTTTCATTAGCCCTTAAATTTTAGTTTTTTGAGAGCATTCTCGTGCGAAATTTATGACTACTTTGATCTTGTCCATGTGTAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTACTTGGGTACTAAGCAGAAACTTGTTTGTTTGCAGTCTTCAGTACTATCTTGATAGTCTTTAGGATATATTTATAGTTTCATAACCACGAGTGAAAAAATTATCTCAAGACGTATTGAGGAGTTTGGAGGGAAGTTTCCCGGGATGCCTTGGTTCGAGCCTCCATGTGGTAAACCTTAGAAGTGAATATATTTTTCTCACTTGTTATGTTTCCTAGAGTAGTTGGCTTTATGTTGCACAAAGTCTCCCTGCAGTGTTGGAGTGGGCCACAGCTGATATAAAAAATAAATGATTTTTGACTTGCAGACCCCATTTTATACATAGACCACCCTCTGTTTGGCTGTTCCTAATATGAAAATATGATGCAGGTTTTGAGCAAGCTATTCAAGCTTATGCCGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGTATGAATAAATAAAAAAATTTGTCTGTCATTTTACTGTTGAAATAAACTTGGAGTTTGTACTTCAACTATTATTGCTGTAATTTTCATTAGTGTTCACTTGTATGTGGCTTGCCGTGGCTGCACTCCTAATGATCGGTGTCATAATTTTTGTTCTCTGCTGTTAACTATACCATAAATCCTATTCCAAGTAACCTTGCATTGTCTATTTCCTGTCTGACATGCTTTAGAGGATGCCTACCCATCACCCCAATTCTTCTCGTTTTCAAGTTTTTTCTTCAATTGATACTTTCTAGTACTATATGTTCAATATCCCGTGTTAATATTCTAAATTTTACGTCGGCATGTTACAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGGAAGGGCCAACTTATTGTAATGCCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCTTTGGAACACATTACTCGCATCTTTCCAATTCTCAGCTAATTAACACACGTACCGGTAACGAATGTTGTTACTTTTGTTCATTTCATATTTGTTCTTGTCGTTTCATTTGGGGATTACTGCGAGGTTGCTTCTATATTATCGTCCAATTTTCCAATTAATGACAGAGGAAGAATAGATTACCCTTTAGGGTAGTTAGTCTGATTTTGATGTGTTTATATTTGTACTTTAATCATGCCATTTCATAACGGTCATAAGATCATAGAAATTGCCAAGGCAAGGTGTCCTTATATGGTGGCGTATAAGGTGGCACGCCTAATTTTGAAGCGTTTCGCTTAGAATAATTATGATCTTTTTTTGGGCATTGTAGACGTGAGTTCATATCATATGTGCATGATTGACATGTCTTGTTGTGTAAAGTACTCGGGGAGGATTAGAAGTGTTTTTTTTTCCTGGGGAAGTTGATAGTGTTTTCTTGAAGTTTAAGGGATGTCGATAACTCTTTAAATGCACATTTAAGTTAGTTTCAATTCCTTGG

mRNA sequence

ATTTTGGACGAAACCCTAAAATAGAGGATTCATCAACGTCCCCAATCGAGGGTTTCGAGCGGGAACCTCAGCACAAGTTGGAAGTGTATACTTCAACGAAGAAAAGCTTATCCGGATACCTAATCGGCGACGGAATCCGGTGGTATGGGAAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTTGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACGCAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCCGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGGAAGGGCCAACTTATTGTAATGCCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCTTTGGAACACATTACTCGCATCTTTCCAATTCTCAGCTAATTAACACACGTACCGGTAACGAATGTTGTTACTTTTGTTCATTTCATATTTGTTCTTGTCGTTTCATTTGGGGATTACTGCGAGGTTGCTTCTATATTATCGTCCAATTTTCCAATTAATGACAGAGGAAGAATAGATTACCCTTTAGGGTAGTTAGTCTGATTTTGATGTGTTTATATTTGTACTTTAATCATGCCATTTCATAACGGTCATAAGATCATAGAAATTGCCAAGGCAAGGTGTCCTTATATGGTGGCGTATAAGGTGGCACGCCTAATTTTGAAGCGTTTCGCTTAGAATAATTATGATCTTTTTTTGGGCATTGTAGACGTGAGTTCATATCATATGTGCATGATTGACATGTCTTGTTGTGTAAAGTACTCGGGGAGGATTAGAAGTGTTTTTTTTTCCTGGGGAAGTTGATAGTGTTTTCTTGAAGTTTAAGGGATGTCGATAACTCTTTAAATGCACATTTAAGTTAGTTTCAATTCCTTGG

Coding sequence (CDS)

ATGGGAAGAGAATTGCAGAAGCAGCCACAGCAAGAGATGGCGTCTGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCTGATATCCTTCCTGATCTTGAAAACTACGTAAATGAGCAGGTCTCGTCAGAAACCTACAGTTTAGATGCTAATTTATGCCTGCTTCGCCTCTACCAGTTTGAGCCCGAAAGAATGAGTACGCAAATTGTGGCTCGCATCCTGGTCAAGGCTCTGATGGCAATTCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTAATTCCAGAACGAGTGCAAATGGAGGATCAATTCAAGACTCTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTCCGTCAATTTTGGGATGAAGCTGCGAAGAACCGCCACATAGTTGAAGCTGTGCCAGGTTTTGAGCAAGCTATTCAAGCTTATGCCGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCTGAGGCAATCAATATTGAGGGCTTATCTTTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGGAAGGGCCAACTTATTGTAATGCCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCTTTGGAACACATTACTCGCATCTTTCCAATTCTCAGCTAA

Protein sequence

MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKGQLIVMPPNEFNHPELKKKSSDSIPLEHITRIFPILS

Homology

[Close]

BLAST of CmaCh11G007610 vs. ExPASy Swiss-Prot
Match: Q94HF1 (Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japonica OX=39947 GN=TIF3K1 PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 7.6e-97
Identity = 167/216 (77.31%), Postives = 200/216 (92.59%), Query Frame = 0


Query: 17  VEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILV 76
           VE+L+AVNPYNPDIL DLE +VN+QVS++TY+LDANL LLRLYQFEPER+S QIV+RIL+
Sbjct: 12  VEELVAVNPYNPDILNDLEGFVNDQVSNQTYNLDANLSLLRLYQFEPERLSVQIVSRILI 71

Query: 77  KALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKNRHIVEAV 136
           KALMA+P PDFSLCLFLIPE VQME+QFKTLI+LSHYLET +FRQFWDEA+KNR+I++ V
Sbjct: 72  KALMAMPGPDFSLCLFLIPEHVQMEEQFKTLIVLSHYLETARFRQFWDEASKNRNILDVV 131

Query: 137 PGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKG 196
           PGFEQAIQ+YA+HVLSLTYQKVPR VLAEAINIEGL+LDKFLEH +ANSGW++EKG  + 
Sbjct: 132 PGFEQAIQSYAIHVLSLTYQKVPRPVLAEAINIEGLALDKFLEHHIANSGWVIEKG-ARS 191

Query: 197 QLIVMPPNEFNHPELKKKSSDSIPLEHITRIFPILS 233
           QLIV+P NEFNHPELKK +++++P EH+TRIFP+LS
Sbjct: 192 QLIVLPRNEFNHPELKKNTAETVPFEHVTRIFPVLS 226

[Close]

BLAST of CmaCh11G007610 vs. ExPASy Swiss-Prot
Match: Q9SZA3 (Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana OX=3702 GN=TIF3K1 PE=2 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.3e-96
Identity = 175/231 (75.76%), Postives = 207/231 (89.61%), Query Frame = 0


Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MG E+Q  PQ++ +  VEQL+A+NP+NP+ILPDLENYVN  V+S+TYSL+ NLCLLRLYQ
Sbjct: 1   MGVEIQ-SPQEQSSYTVEQLVALNPFNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERM+T IVARILVKALMA+P PDFSLCLFLIPERVQME+QFK+LI+LSHYLETG+F+
Sbjct: 61  FEPERMNTHIVARILVKALMAMPTPDFSLCLFLIPERVQMEEQFKSLIVLSHYLETGRFQ 120

Query: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEAAKNRHI+EAVPGFEQAIQAYA H+LSL+YQKVPRSVLAEA+N++G SLDKF+E 
Sbjct: 121 QFWDEAAKNRHILEAVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQ 180

Query: 181 QVANSGWILEKGHGKGQLIVMPPNEFNHPELKKKSSDSIPLEHITRIFPIL 232
           QV NSGWI+EK   +G  IV+P NEFNHPELKK + +++PLEHI RIFPIL
Sbjct: 181 QVTNSGWIVEK---EGGSIVLPQNEFNHPELKKNTGENVPLEHIARIFPIL 225

[Close]

BLAST of CmaCh11G007610 vs. ExPASy Swiss-Prot
Match: Q3T0V3 (Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus OX=9913 GN=EIF3K PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDSQLKVWMSKYGWSA 184

Query: 190 EKGHGKGQLIVMPPNEFNHPE--LKKKSSDSI 220
           ++    GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE---SGQIFICSQEESIKPKNIVEKIDFDSV 210

[Close]

BLAST of CmaCh11G007610 vs. ExPASy Swiss-Prot
Match: Q9UBQ5 (Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens OX=9606 GN=EIF3K PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSDSQLKVWMSKYGWSA 184

Query: 190 EKGHGKGQLIVMPPNEFNHPE--LKKKSSDSI 220
           ++    GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE---SGQIFICSQEESIKPKNIVEKIDFDSV 210

[Close]

BLAST of CmaCh11G007610 vs. ExPASy Swiss-Prot
Match: Q9DBZ5 (Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus OX=10090 GN=Eif3k PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 0


Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEAAKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDNQLKVWMSKYGWSA 184

Query: 190 EKGHGKGQLIVMPPNEFNHPE--LKKKSSDSI 220
           ++    GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE---SGQVFICSQEESIKPKNIVEKIDFDSV 210

[Close]

BLAST of CmaCh11G007610 vs. TAIR 10
Match: AT4G33250.1 (eukaryotic translation initiation factor 3K )

HSP 1 Score: 354.0 bits (907), Expect = 9.3e-98
Identity = 175/231 (75.76%), Postives = 207/231 (89.61%), Query Frame = 0


Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MG E+Q  PQ++ +  VEQL+A+NP+NP+ILPDLENYVN  V+S+TYSL+ NLCLLRLYQ
Sbjct: 1   MGVEIQ-SPQEQSSYTVEQLVALNPFNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERM+T IVARILVKALMA+P PDFSLCLFLIPERVQME+QFK+LI+LSHYLETG+F+
Sbjct: 61  FEPERMNTHIVARILVKALMAMPTPDFSLCLFLIPERVQMEEQFKSLIVLSHYLETGRFQ 120

Query: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEAAKNRHI+EAVPGFEQAIQAYA H+LSL+YQKVPRSVLAEA+N++G SLDKF+E 
Sbjct: 121 QFWDEAAKNRHILEAVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQ 180

Query: 181 QVANSGWILEKGHGKGQLIVMPPNEFNHPELKKKSSDSIPLEHITRIFPIL 232
           QV NSGWI+EK   +G  IV+P NEFNHPELKK + +++PLEHI RIFPIL
Sbjct: 181 QVTNSGWIVEK---EGGSIVLPQNEFNHPELKKNTGENVPLEHIARIFPIL 225

The following BLAST results are available for this feature:

BLAST of CmaCh11G007610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HF1	7.6e-97	77.31	Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japo...	[more]
Q9SZA3	1.3e-96	75.76	Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana OX=...	[more]
Q3T0V3	1.3e-27	33.49	Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus OX=9913 GN=EI...	[more]
Q9UBQ5	1.7e-27	33.49	Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens OX=9606 GN=...	[more]
Q9DBZ5	1.7e-27	33.49	Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus OX=10090 GN...	[more]

BLAST of CmaCh11G007610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33250.1	9.3e-98	75.76	eukaryotic translation initiation factor 3K	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 128..231 e-value: 3.8E-18 score: 67.6
IPR033464	CSN8/PSMD8/EIF3K	PFAM	PF10075	CSN8_PSD8_EIF3K	coord: 67..194 e-value: 6.6E-17 score: 61.8
IPR016020	Translation initiation factor 3, subunit 12, N-terminal, eukaryotic	GENE3D	1.25.40.250	ARM repeat; domain 1	coord: 8..125 e-value: 1.4E-41 score: 142.9
None	No IPR available	PANTHER	PTHR13022:SF3	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K	coord: 8..231
IPR009374	Eukaryotic translation initiation factor 3 subunit K	PANTHER	PTHR13022	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11	coord: 8..231
IPR009374	Eukaryotic translation initiation factor 3 subunit K	HAMAP	MF_03010	eIF3k	coord: 8..232 score: 24.264549
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 47..206 score: 12.637497
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 137..229
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 10..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G007610.1	CmaCh11G007610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity