CmaCh11G007000 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATAAGTTTGTATCATCATGGGCCACATGATAGGTTATTGGGCCTAAACCGGTTCGGTTCAATTGATCCGAATGTGAAATGATAAATAACCAGGAGCCCCCTCGGGAGGGGAGGCGGCAGGCGCGACTTCGGATAGATCTGTGTCATTTCAGTTTTTGGCGAATTTACAGGGTTTTACGAGCTCAAAAATGGTGGTGAGAATTCGATTGTCGAGGTTTGGATGCAAGAACAAGCCGTTTTACAGGGTGATGGCTGCCGATAGCCGATCTCCCAGAGACGGCAAGCATCTCGAGGTTCTAGGTTACTATAATCCCCTGCCAGGTTAATTCCTCTGTTATTTCCTTTTTTTGTTTTGTTTGTTTATTTCGAAAATGTGATTGATTACTCCCCTGCTAGCTTGGATGTTGGAGTTTAGATTCTCGATTAGGAAAACATTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTCCATTGATTTGAGTAATTTTGTGCAGGTCAAGATGGCGGTAAACGAATGGGTCTTAATTTTGAAAGAGTGAAGTAAGTGATTTCTTTTGATTTAAAGCTTGTTTATTCTTGAATATCTACGATTCCCGAATTTAAGTGGTGCATTGCAATTGTAAATACTAGTTTCCTTTGTCAGAATAGGATTATTTCGCCAATGCTTCTTCGATGGACTTTTAGGGAACCATTTCTGAGGCTAATATGTTTTCTGTGGTTAAATAGAGAATTACTACAACGTTAAATTCTGTCTAGTCTAACAATTTAAGCTTTTAATTACAATATGTAAAGTGGTCGAAACTTTTAGGTCTAGTGGTGAATCAACATGCTATAAAAAAAGATGTCCTATTTGATAATAGAAAAAAAGGTCCTAAATTCAAGCTCATGTTATGATACTTTCCGTCCCATTATAGCAACAAGTCGCACATTGCACTGTATGAGTCTAATTAGAATTTTGGCTACACCTGAGTGAAAATGTAAAAAAAGTGTCAATTGACTAAATTTATCTTTACTCGACAAATTAAGTTAAAAAAAGTGCCCCAGTAGTTTAGTTGATTAGGTGTTTGAGAAGTGGTTCTATTTTCTTGTGGCGGCAAAGAATTGAAAAAAGTTGGTGGTTCTTTCTGCATGTCATGGCTGGAACTTCATATTGTAAGCTAAAGTTATGTCAGGAAGCAACTTAGTTGAGCAAGGAATTGAACTATGGTGCTGGCACCAACTTGTCAAAAAGTAGCCAAGTGTGCGATTGTCTGATGGGCATGTCCATTGGTTAAGCCAGTAGGAAATGGTAAAATAGAGGGAGTGCACCAGTTAACTAGATACCTAAAGGAATTGATTATCGAGATGATGGAGACAATGAGAAATCTTTACTTTGTAGAGCATCTATGAATTTATCAAATATCAATCAGTTCTCTTATTAGGAATGTAGAATCTTTTGTTTGCTTTCATTGCATTCCTAATTTCAAGTTCTATTTAATTATTAGTAAAGATCTCAGAGGATGAAACTCGTAAGATAAATCTTTATCTTAGGATATCATTCCTATTATATGAAGGTATCATGCAATGCATAAGAGTAAACCATCATGTACAAGTCTTTAGCATTCAGCGTTTTCTCTCTAAATCGTTTCTACCCCTTCATTTTCCAAGTGTTTCTACTCTTCTCACCCTCAAATCCAATTAAAAGGGGACCCTCCTCCACTTATTTTCCAGATTATTCAGCGAGAGTGAGTTTGCTTCGAGTTTCAGCAGCCGATTTCCTTTGTTTCTCCTTTTCCTCCCCTTCCAATCGGCCTCCCACTCCCTTCTTAAGGTACCCAACTCTCCGATTTCAAGCAAAAATCCGGGGTTGAAGCTGACCAAAACCTCCCTTGCATGCCACTGTTCTGTTACCTCTACCACCTGTCGTTGGTCACAGTGTACAGCCGGCGACTCACACGTTTTATGAAAATTTATTTATTCCCTTTTTATTGAAAAAAAAATCAGATACTACATTGACTGTGCTAGTCTCCAATTTAAAGCTCATCAAGCACGATAGCATCTTAAAATTTGGAGTAACCATTTACTCTTTCCCTCCCTTTCAGATATTGGCTTTCAGTTGGTGCTCAACCTTCAGATCCTGTGCAGCGAATTCTTTTTAGAGCAGGGGTACTTCCACCACCCCCAATGGTTGCAATGGCACGTAAAGGTGGACCACGTGATACTCGTCCTGTTGATCCCCTTAGCGGACGCTTCACGACTCCACAGAAGGCAACTGATGATTCCAATAGCAGCAAAGATGGGGACGCTGATTCATAAAATTTTTCTTTAGAAAAGCCTCTGGAACAACCTGTTGTTCAGGTAATAGAGTTCAATAAATCTGTCGATTTACTTCGGTTGCAAGATGAATGGTTTTTTATGGGAAATTATGAAAGGCCGAGTATTTTCAGTTTATTCTGAAATACTAAGACGAGCCTATAGATATGATCAATAGCCAATCCCCAGTGCCAAGTATAGGGCCGTTGGACTTAGCTATCTTAATGAAGGTGAGCCATTCCATTACTTCGAGAAAACATTGTCGTGTTGTTGTATCAATTAAAATGAGATAGGATTATGATTTTGCTTCCGGGGTAGCTTTGAAAACATATCTTTGTGAACTATTAACCATTTCGTTTGCCCGTATGTGCACTGTTTTCTCAGTTGAACTATCTTCTTCAATCCTGTCATCTCTTTGCGACTCTGATTACTCCCCTAGAATGCATATGAGACAATATTTTGCTTTCAGCAAATAGGGTGTGTTAAATTACCTTGTGCTGATAAACCAGAAAGCCTTGGCCCTTGATTCCTTTTAAATAGCATACAAGCATCGTCAATTCCGCATGTAGTTGGAGCATTTTCTTGTGGGTTTAGGGTTCTTTCTTTTTCGTTTATGCTATAGTTTTCCACAGCTTGTTTCTGTTTCTTTTAAACTCAACTATATAATTGTGTACCCACTTTGTTTCAAAGGGCATCAAGAAAAATTGTTGGGCAACCTTGTTTTCGTACTTAATGTTGATGTGTAGCCGAAAGATGATGGCAGGGTACATTTTCTTTTAATGTTGATTGGAGATTTCTAATCGACATGGTAGAAAGAAGAATTACGGGTATTTAGACCAATAGAGTTTGAGTTTGATGATAACTTTCTTCGCATTTTCTCTCTTATTCTCTCATTTACGTCCTTC ATGGAAATAAGAGCCCCCTCGGGAGGGGAGGCGGCAGGCGCGACTTCGGATAGATCTGTGTCATTTCAGTTTTTGGCGAATTTACAGGGTTTTACGAGCTCAAAAATGGTGGTGAGAATTCGATTGTCGAGGTTTGGATGCAAGAACAAGCCGTTTTACAGGGTGATGGCTGCCGATAGCCGATCTCCCAGAGACGGCAAGCATCTCGAGGTTCTAGGTTACTATAATCCCCTGCCAGGTCAAGATGGCGGTAAACGAATGGGTCTTAATTTTGAAAGAGTGAAATATTGGCTTTCAGTTGGTGCTCAACCTTCAGATCCTGTGCAGCGAATTCTTTTTAGAGCAGGGGTACTTCCACCACCCCCAATGGTTGCAATGGCACGTAAAGGTGGACCACGTGATACTCGTCCTGTTGATCCCCTTAGCGGACGCTTCACGACTCCACAGAAGGCAACTGATGATTCCAATAGCAGCAAAGATGGGGACGCTGATTCATAAAATTTTTCTTTAGAAAAGCCTCTGGAACAACCTGTTGTTCAGGTAATAGAGTTCAATAAATCTGTCGATTTACTTCGGTTGCAAGATGAATGGTTTTTTATGGGAAATTATGAAAGGCCGAGTATTTTCAGTTTATTCTGAAATACTAAGACGAGCCTATAGATATGATCAATAGCCAATCCCCAGTGCCAAGTATAGGGCCGTTGGACTTAGCTATCTTAATGAAGGTGAGCCATTCCATTACTTCGAGAAAACATTGTCGTGTTGTTGTATCAATTAAAATGAGATAGGATTATGATTTTGCTTCCGGGGTAGCTTTGAAAACATATCTTTGTGAACTATTAACCATTTCGTTTGCCCGTATGTGCACTGTTTTCTCAGTTGAACTATCTTCTTCAATCCTGTCATCTCTTTGCGACTCTGATTACTCCCCTAGAATGCATATGAGACAATATTTTGCTTTCAGCAAATAGGGTGTGTTAAATTACCTTGTGCTGATAAACCAGAAAGCCTTGGCCCTTGATTCCTTTTAAATAGCATACAAGCATCGTCAATTCCGCATGTAGTTGGAGCATTTTCTTGTGGGTTTAGGGTTCTTTCTTTTTCGTTTATGCTATAGTTTTCCACAGCTTGTTTCTGTTTCTTTTAAACTCAACTATATAATTGTGTACCCACTTTGTTTCAAAGGGCATCAAGAAAAATTGTTGGGCAACCTTGTTTTCGTACTTAATGTTGATGTGTAGCCGAAAGATGATGGCAGGGTACATTTTCTTTTAATGTTGATTGGAGATTTCTAATCGACATGGTAGAAAGAAGAATTACGGGTATTTAGACCAATAGAGTTTGAGTTTGATGATAACTTTCTTCGCATTTTCTCTCTTATTCTCTCATTTACGTCCTTC ATGGAAATAAGAGCCCCCTCGGGAGGGGAGGCGGCAGGCGCGACTTCGGATAGATCTGTGTCATTTCAGTTTTTGGCGAATTTACAGGGTTTTACGAGCTCAAAAATGGTGGTGAGAATTCGATTGTCGAGGTTTGGATGCAAGAACAAGCCGTTTTACAGGGTGATGGCTGCCGATAGCCGATCTCCCAGAGACGGCAAGCATCTCGAGGTTCTAGGTTACTATAATCCCCTGCCAGGTCAAGATGGCGGTAAACGAATGGGTCTTAATTTTGAAAGAGTGAAATATTGGCTTTCAGTTGGTGCTCAACCTTCAGATCCTGTGCAGCGAATTCTTTTTAGAGCAGGGGTACTTCCACCACCCCCAATGGTTGCAATGGCACGTAAAGGTGGACCACGTGATACTCGTCCTGTTGATCCCCTTAGCGGACGCTTCACGACTCCACAGAAGGCAACTGATGATTCCAATAGCAGCAAAGATGGGGACGCTGATTCATAA MEIRAPSGGEAAGATSDRSVSFQFLANLQGFTSSKMVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGVLPPPPMVAMARKGGPRDTRPVDPLSGRFTTPQKATDDSNSSKDGDADS Homology
BLAST of CmaCh11G007000 vs. ExPASy Swiss-Prot
Match: Q9LTS6 (30S ribosomal protein S16-2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS16-2 PE=1 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.7e-55 Identity = 99/130 (76.15%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of CmaCh11G007000 vs. ExPASy Swiss-Prot
Match: O65686 (30S ribosomal protein S16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS16-1 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.8e-31 Identity = 61/109 (55.96%), Postives = 85/109 (77.98%), Query Frame = 0
BLAST of CmaCh11G007000 vs. ExPASy Swiss-Prot
Match: A8LMC0 (30S ribosomal protein S16 OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) OX=398580 GN=rpsP PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.1e-20 Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of CmaCh11G007000 vs. ExPASy Swiss-Prot
Match: Q5LNF2 (30S ribosomal protein S16 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=rpsP PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.1e-20 Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of CmaCh11G007000 vs. ExPASy Swiss-Prot
Match: A5V9P7 (30S ribosomal protein S16 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) OX=392499 GN=rpsP PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.1e-20 Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of CmaCh11G007000 vs. TAIR 10
Match: AT5G56940.1 (Ribosomal protein S16 family protein ) HSP 1 Score: 214.9 bits (546), Expect = 4.8e-56 Identity = 99/130 (76.15%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of CmaCh11G007000 vs. TAIR 10
Match: AT4G34620.1 (small subunit ribosomal protein 16 ) HSP 1 Score: 137.1 bits (344), Expect = 1.3e-32 Identity = 61/109 (55.96%), Postives = 85/109 (77.98%), Query Frame = 0
BLAST of CmaCh11G007000 vs. TAIR 10
Match: ATCG00050.1 (ribosomal protein S16 ) HSP 1 Score: 55.1 bits (131), Expect = 6.3e-08 Identity = 28/81 (34.57%), Postives = 45/81 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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