CmaCh11G006630 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G006630
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Nudix hydrolase domain-containing protein
Location	Cma_Chr11: 3223292 .. 3224362 (+)
RNA-Seq Expression	CmaCh11G006630
Synteny	CmaCh11G006630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATTGCAGCATAAACCGAGCGGAATTGTTCGATATTCTTCTGAACAAATGCCAGGTAAAACCACGACATGCTTAATAATATGCACTATATTCTCATTCTTTATCTATTGGATGGCGTTGATAAGTGGTCTTAGTGAGGAGATGAACTCGTGTTTATGGATGATTCCTTTTGCCCATAAGGTGTTTGATAAAATGTCTGGATCATTTTTTCAACGTAGTGGTTGCTCTGCCGATGCTACTCTTTCTTTTATTCATATTCTCTCTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTACTTGTGCATCGTCGACTCATTTGAATATTCCAGCATGTTTGAACATATCTATATGGAAAGAAGCTGACTGCAGTTTTCTTTCTTCAGAAGGAAGAAAAATGTGCCTTCCTTTGACAAGATGGTCAAGTTTCCAGGGCTACCCTAAAGGTAGAATTTGTTTCCCATCTTTCAACGGGAAGATTGTTCGAAGATTGTTGGGAGGGAGTCCCACATTGACTAATTTAGAAAATGATCACGGGTTTATAAGTAAGTAATACATTTTGGAGAAGCCCAAAGCAAAGCCACAAGAGCTTATGCTCAAAGTAAACAATATTATACTATTGTGGAGATTCGTGATTCTTAACAATGATCGCTTGAAATTGTAGAGCTTGTAGAGCTGTAGTAACTCGTTGTGGGGTTGGTTTCGACTTCCATATAATCACTCATCTCTTAAAGAATCGAAATGAATTAATTTTTCTTCTTTAATGTGACCTTCCCATTATCCAGGTATCTTGAACAAGGATGGTCTACCAGAAACTTCAAGTACTAGAAAACTTATTCTCATCAATGGTAACATTGGACCCAAAAGAACAGCACTTGATGTTTTGTCTCCTGACATTTATACACCAATCGTGGATGTGGAACTTCTAGATCACTGGAATGATGAATACGAAGGGGTCATCATTAATTCAGAGAGCCTACCCTCTTCTGCAAACGCCTTTGCTTCAGCTCTCCAGGCATCTCTCTTCCAATGA

mRNA sequence

AAAATTGCAGCATAAACCGAGCGGAATTGTTCGATATTCTTCTGAACAAATGCCAGGTATCTTGAACAAGGATGGTCTACCAGAAACTTCAAGTACTAGAAAACTTATTCTCATCAATGGTAACATTGGACCCAAAAGAACAGCACTTGATGTTTTGTCTCCTGACATTTATACACCAATCGTGGATGTGGAACTTCTAGATCACTGGAATGATGAATACGAAGGGGTCATCATTAATTCAGAGAGCCTACCCTCTTCTGCAAACGCCTTTGCTTCAGCTCTCCAGGCATCTCTCTTCCAATGA

Coding sequence (CDS)

ATGCCAGGTATCTTGAACAAGGATGGTCTACCAGAAACTTCAAGTACTAGAAAACTTATTCTCATCAATGGTAACATTGGACCCAAAAGAACAGCACTTGATGTTTTGTCTCCTGACATTTATACACCAATCGTGGATGTGGAACTTCTAGATCACTGGAATGATGAATACGAAGGGGTCATCATTAATTCAGAGAGCCTACCCTCTTCTGCAAACGCCTTTGCTTCAGCTCTCCAGGCATCTCTCTTCCAATGA

Protein sequence

MPGILNKDGLPETSSTRKLILINGNIGPKRTALDVLSPDIYTPIVDVELLDHWNDEYEGVIINSESLPSSANAFASALQASLFQ

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh11G006630 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G006630 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003293	Nudix hydrolase 6-like	PANTHER	PTHR13994	NUDIX HYDROLASE RELATED	coord: 29..82
None	No IPR available	PANTHER	PTHR13994:SF36	NUDIX HYDROLASE 8-LIKE	coord: 29..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G006630.1	CmaCh11G006630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016462	pyrophosphatase activity