CmaCh11G006570 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTATTGATTGATGATAAAGGGTTGGGTTTTTGGATAAAGCAACAAAAAGGGGAATTATCTAACTTTTATGCTACATTTAATTATAAACTAAGCTTTCCACGCATATATAAATAGCTTTTCAAGCGCACATACTACGGTTGCAATATATAATACCTTTCTTCTTCTTCTCCTTCAGATTGATTCCAATGGGAGAATTGCAAGAAACTCAGCGTCTTTATGTTGATGAAGCTCAGAGTGGTTGTTGCAGAACGATCATGGAAGATTGTGAAGCTTCAATGGAGTCTTCCATGGAGTTTAGTTCTGCAAATTCTGAAGCATCTTCTTCTTTGGAGATGGTGGAAGATGCCCTTTCTACAGTTTCGGATTCTTCATTATCATCATCTTCTTCTTCAAATGGACCTCTTTTTGAGCTATCAGAGCTTATGGTTCATCTTCCGATGAAGTAAGTAATGGGATAAATTTTTTTTAAAAAAAACATACCCTTTTCATGATCTTTCTTTGGATACACATTATGATTGAAAGAGTTGATCAATATGACTAATGGGAAAATTTTGAAATGGTTTTGTTTTTGCAGGAGAGGGCTGTCTAAATATTATGACGGCAAATCAGAATCTTTCACATCTCTAGCAAGTGTTGAAAGATTAGAAGATTTAGCGAAGAGGGTTTGTCCAATTAGAAAAAAGTTCAAATCTTGCAAGAGTGTTGGAGGAGGATTTGATGGCCATAAATCCATTGTCCCAAGAGCTACCTTAGCCAAGAAAGCTTCAAGATCAAGAGGGAAAAGTAGTCTGATCTGTGGTTCTAGGTCTGTAGTTTCTGTGAATTGGCACTGATTATTTGCTACCCTTAAATGACTTGACTTGTAAATTTTCAAGCTCATTTCTCCCCTCTTTTTTGTTCTTTTATAAAGAATTTTATAACTTAACCTATCATTTTAAAACATGGGTCCTTCCAGAAAACGAGGAGAATAAATTTGTAGAACCTGATATCAAATGTTGGAAAATTCACATGGGACAAGATAATAATGTATTAAAGATAATCCTAAAGATCACAAACCATTGGTAGAATTTGAGTTACAAATTCTCTCTGTTGAATGAAAGTCTCACATCGGC ATTATTGATTGATGATAAAGGGTTGGGTTTTTGGATAAAGCAACAAAAAGGGGAATTATCTAACTTTTATGCTACATTTAATTATAAACTAAGCTTTCCACGCATATATAAATAGCTTTTCAAGCGCACATACTACGGTTGCAATATATAATACCTTTCTTCTTCTTCTCCTTCAGATTGATTCCAATGGGAGAATTGCAAGAAACTCAGCGTCTTTATGTTGATGAAGCTCAGAGTGGTTGTTGCAGAACGATCATGGAAGATTGTGAAGCTTCAATGGAGTCTTCCATGGAGTTTAGTTCTGCAAATTCTGAAGCATCTTCTTCTTTGGAGATGGTGGAAGATGCCCTTTCTACAGTTTCGGATTCTTCATTATCATCATCTTCTTCTTCAAATGGACCTCTTTTTGAGCTATCAGAGCTTATGGTTCATCTTCCGATGAAGAGAGGGCTGTCTAAATATTATGACGGCAAATCAGAATCTTTCACATCTCTAGCAAGTGTTGAAAGATTAGAAGATTTAGCGAAGAGGGTTTGTCCAATTAGAAAAAAGTTCAAATCTTGCAAGAGTGTTGGAGGAGGATTTGATGGCCATAAATCCATTGTCCCAAGAGCTACCTTAGCCAAGAAAGCTTCAAGATCAAGAGGGAAAAGTAGTCTGATCTGTGGTTCTAGGTCTGTAGTTTCTGTGAATTGGCACTGATTATTTGCTACCCTTAAATGACTTGACTTGTAAATTTTCAAGCTCATTTCTCCCCTCTTTTTTGTTCTTTTATAAAGAATTTTATAACTTAACCTATCATTTTAAAACATGGGTCCTTCCAGAAAACGAGGAGAATAAATTTGTAGAACCTGATATCAAATGTTGGAAAATTCACATGGGACAAGATAATAATGTATTAAAGATAATCCTAAAGATCACAAACCATTGGTAGAATTTGAGTTACAAATTCTCTCTGTTGAATGAAAGTCTCACATCGGC ATGGGAGAATTGCAAGAAACTCAGCGTCTTTATGTTGATGAAGCTCAGAGTGGTTGTTGCAGAACGATCATGGAAGATTGTGAAGCTTCAATGGAGTCTTCCATGGAGTTTAGTTCTGCAAATTCTGAAGCATCTTCTTCTTTGGAGATGGTGGAAGATGCCCTTTCTACAGTTTCGGATTCTTCATTATCATCATCTTCTTCTTCAAATGGACCTCTTTTTGAGCTATCAGAGCTTATGGTTCATCTTCCGATGAAGAGAGGGCTGTCTAAATATTATGACGGCAAATCAGAATCTTTCACATCTCTAGCAAGTGTTGAAAGATTAGAAGATTTAGCGAAGAGGGTTTGTCCAATTAGAAAAAAGTTCAAATCTTGCAAGAGTGTTGGAGGAGGATTTGATGGCCATAAATCCATTGTCCCAAGAGCTACCTTAGCCAAGAAAGCTTCAAGATCAAGAGGGAAAAGTAGTCTGATCTGTGGTTCTAGGTCTGTAGTTTCTGTGAATTGGCACTGA MGELQETQRLYVDEAQSGCCRTIMEDCEASMESSMEFSSANSEASSSLEMVEDALSTVSDSSLSSSSSSNGPLFELSELMVHLPMKRGLSKYYDGKSESFTSLASVERLEDLAKRVCPIRKKFKSCKSVGGGFDGHKSIVPRATLAKKASRSRGKSSLICGSRSVVSVNWH Homology
BLAST of CmaCh11G006570 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 87.8 bits (216), Expect = 9.1e-18 Identity = 69/149 (46.31%), Postives = 90/149 (60.40%), Query Frame = 0
BLAST of CmaCh11G006570 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-14 Identity = 61/129 (47.29%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of CmaCh11G006570 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 2.0e-04 Identity = 43/137 (31.39%), Postives = 69/137 (50.36%), Query Frame = 0
BLAST of CmaCh11G006570 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04 Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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