CmaCh11G005640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G005640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAD(+) diphosphatase
Location	Cma_Chr11: 2716863 .. 2719625 (+)
RNA-Seq Expression	CmaCh11G005640
Synteny	CmaCh11G005640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCGCTTCAATGGACATTAATGGAAAACACCCTTCTAATAATCACCCTCAAATTCTGAGTCAAACTCAACTCTAATTTTGTGGCTGCAAACAAGATTTTGTTTATTTTGAAGATTCCAATTAACTTATCATGGAAAATTCTTACCTGAACTTGTTCATCGTCATCATTTTGCTCATCCACTGTTCTTGCTTCTCTTTGCTTCACTGAAGTAGGCTTGTTTTGATTTTGTTTTGTTTTGTTGGTTGGATGACGTTGGTGAATTTTCAAGTGAGGGGATTTGTGAAGGAGAATTGGACACCTCAGAACCACGTAGTTCAAAAGAATGAACAATTATTGCATCCAAATGCTTTTTGAATTTTGATCGCCTTGGATTTCTGATGGCGAACGGCGCAAGAGCATTCCTCACTGTATCCAAATCGACTTCACGACTGCTTCGTCTTCCTCCTGCTTCGTCTCGTTTCTTCCCGCCGTTTAACTCCTCCTTCAATGGAGCAACCTTCTGTTCCTCCACCGGAACCCCTTCCATGTCCATTAATTTACAGTCGCATGCCTTTGCGCGAAACCCTATAAGATCCAAAACCCCCAAACCTGAAAATCCCCTTTCACCCGATTCGTCGTTCGAATCGCTGAAATCGAAGCTTCTGGCGAAAACCCCTTTGCTATCTTCACCAGATTTCAAAATTTTGCCCTTCAGGAAGGGCTGGCCGTTGGTTTCTTGCAATGGTGGGAAGAGGAACGGTGGTTTGGCGTCTGGGTGGGGCCTGGGTTGGATCAGCTTGGCTGATTGCGCAAGTCTATTGGCCTTGTCTGGGTCGAAGGTAACAGAAGATTTGTTGGTTTATCTCGGTTCTTCTGTTGAAGACGATGCTGTTTATTGGGCCACTGATTTCTCTGGCGCGGATAATTTGGATGCGGAATTGGGTCAAAGGAAGCTCAATTTTATCGAGCTGCGAATGCTCATGGTAGCCACGAATTGGTCGGATACATGGGCAATGGGACAGTTGGCTATTGCTGGTCATGTAAGTGCTCAGAATTGGTTTTTCAATTTGGAGTATGAACATCGTTTCTTAAACTTCTTAATTACTTAAAATGTGGTTGAATCTGTGCGTACCTTTCTGGTCTGTTCGATTGATTGCTCAGGGCAGGGCTTTGCTAGATTGGCATAGAACATCACGTTTCTGTGGGCATTGTAGAGAAAGGACAGTCCCAATGGAAGCTGGGAAGCGAAGGGAATGCTCCAATCAGTCATGCAAATTGAGGATTTTCCCTCGTGTGGATCCTGTGAGATCATAATCCTTTGCTTTTATGATTGCTGAACCTCTGCATGCTGACGGCTATGTATAAATCTTGTTCATTGCAGGTTGTTATCATGTTAGTCATTGACCAGGAGAACGACCGCGCACTCTTAAGCAGGCAATCGAGATATGTGCCCCGAAAATGGAGTTGCTTAGCTGGTTTTATGGAGGTACCTTTCTTTGCCAATGGCAAGAAGAATGATAGAAATAATACATTTGATAGAATAAGACTTCTAGCACTAATGAATATAACTAGTTTATTTGTAGTATGATATCATGTGTTGTGAGATCTCACGTCGGTTAGGGAACAAAACATCCCTTGTAAGGGTGTGAAAATCTATCCCTAATAGATGCGTTCTAAAACTTTGAGGGAAGCCTAAAAGGGAAAGCCCAAATAGGACGATCTATCCCTAATAGATGCGTTCTAAAACCTTGAGGGAAGCCTAAAAGGGAAAGTCCAAATAGGACAATATCTGCTAACGGTGGGCTTGAGCTGTTACAAATGGTATCTGAGCAGCGGTGTACCAGTGAGGATGTTGGGCTCTCAAGAGGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGGAACAAACCACCCTTATTATAAGGGTGTGTAAACCTCTCCCTAGTATAGACACGTTCTAAAACTTGGATGGAAAGCCCAAGTTGTTACATGTATTTCATGAACTAGAGAATTCATTGATTTGCTTTTGTAATTGCCATCAGCCTGGAGAAAGCTTGGAAGAAGCTGTGATAAGAGAAACATTGGAAGAGACTGGTATTGAAGTTGGAAAGGTGGTCTATCACAGTTCTCAGCCATGGCCAGGTCTGTTCATTCTGAAAGTACAGCTTCTTAACTACACCTTTGCACTATCTGTTGGTACTTTCGAAACAAAAACGCTCATTTTTCATGTTTCTCATCGAGATATATATATATATGTATCTGTAATCTATCTTTTAGGCCATCAGTTTGAATCTTCGTTTAAATTGTAATTCTTTCTCAGTTGGACGAAGCACAATGCCGTGTCAATTGATGGTTGGGTTCTTTGCGTATGCAAAATCGCTCGATATCAAGGTGGACAAGGCTGAGTTAGAAGGTATATTGACTAATGTTCACATTATTTGCATTATAATGTCGCCACTTCTAGCTTTCTTTCTAAGACAACTCTTGAAATTCTCGTTCACTTTGAATGGATCTGAATTGGTTGAAACTTTGTGTACAGACGCCCAATGGCACACCAGAGAAGATGTGAAGAAAGCTTTAACATTAAGCGACTACGAGAAGACGCAAAGATCTGCAGCAGCCAAAGTCGAACAACTGTGCAACAGAGTTGAAAGCAGACACAGTCAGTCTGCTGATATCAACGCTGAAGATGGTGGACTTGCTTCCATGTTCTTTCCTGGCCCTCACGCAATCGCTCATCAACTTATCTCCTCTTGGGCTTATCAAGACGATGGAAAATGA

mRNA sequence

CCCCGCTTCAATGGACATTAATGGAAAACACCCTTCTAATAATCACCCTCAAATTCTGAGTCAAACTCAACTCTAATTTTGTGGCTGCAAACAAGATTTTGTTTATTTTGAAGATTCCAATTAACTTATCATGGAAAATTCTTACCTGAACTTGTTCATCGTCATCATTTTGCTCATCCACTGTTCTTGCTTCTCTTTGCTTCACTGAAGTAGGCTTGTTTTGATTTTGTTTTGTTTTGTTGGTTGGATGACGTTGGTGAATTTTCAAGTGAGGGGATTTGTGAAGGAGAATTGGACACCTCAGAACCACGTAGTTCAAAAGAATGAACAATTATTGCATCCAAATGCTTTTTGAATTTTGATCGCCTTGGATTTCTGATGGCGAACGGCGCAAGAGCATTCCTCACTGTATCCAAATCGACTTCACGACTGCTTCGTCTTCCTCCTGCTTCGTCTCGTTTCTTCCCGCCGTTTAACTCCTCCTTCAATGGAGCAACCTTCTGTTCCTCCACCGGAACCCCTTCCATGTCCATTAATTTACAGTCGCATGCCTTTGCGCGAAACCCTATAAGATCCAAAACCCCCAAACCTGAAAATCCCCTTTCACCCGATTCGTCGTTCGAATCGCTGAAATCGAAGCTTCTGGCGAAAACCCCTTTGCTATCTTCACCAGATTTCAAAATTTTGCCCTTCAGGAAGGGCTGGCCGTTGGTTTCTTGCAATGGTGGGAAGAGGAACGGTGGTTTGGCGTCTGGGTGGGGCCTGGGTTGGATCAGCTTGGCTGATTGCGCAAGTCTATTGGCCTTGTCTGGGTCGAAGGTAACAGAAGATTTGTTGGTTTATCTCGGTTCTTCTGTTGAAGACGATGCTGTTTATTGGGCCACTGATTTCTCTGGCGCGGATAATTTGGATGCGGAATTGGGTCAAAGGAAGCTCAATTTTATCGAGCTGCGAATGCTCATGGTAGCCACGAATTGGTCGGATACATGGGCAATGGGACAGTTGGCTATTGCTGGTCATGGCAGGGCTTTGCTAGATTGGCATAGAACATCACGTTTCTGTGGGCATTGTAGAGAAAGGACAGTCCCAATGGAAGCTGGGAAGCGAAGGGAATGCTCCAATCAGTCATGCAAATTGAGGATTTTCCCTCGTGTGGATCCTGTTGTTATCATGTTAGTCATTGACCAGGAGAACGACCGCGCACTCTTAAGCAGGCAATCGAGATATGTGCCCCGAAAATGGAGTTGCTTAGCTGGTTTTATGGAGCCTGGAGAAAGCTTGGAAGAAGCTGTGATAAGAGAAACATTGGAAGAGACTGGTATTGAAGTTGGAAAGGTGGTCTATCACAGTTCTCAGCCATGGCCAGTTGGACGAAGCACAATGCCGTGTCAATTGATGGTTGGGTTCTTTGCGTATGCAAAATCGCTCGATATCAAGGTGGACAAGGCTGAGTTAGAAGACGCCCAATGGCACACCAGAGAAGATGTGAAGAAAGCTTTAACATTAAGCGACTACGAGAAGACGCAAAGATCTGCAGCAGCCAAAGTCGAACAACTGTGCAACAGAGTTGAAAGCAGACACAGTCAGTCTGCTGATATCAACGCTGAAGATGGTGGACTTGCTTCCATGTTCTTTCCTGGCCCTCACGCAATCGCTCATCAACTTATCTCCTCTTGGGCTTATCAAGACGATGGAAAATGA

Coding sequence (CDS)

ATGGCGAACGGCGCAAGAGCATTCCTCACTGTATCCAAATCGACTTCACGACTGCTTCGTCTTCCTCCTGCTTCGTCTCGTTTCTTCCCGCCGTTTAACTCCTCCTTCAATGGAGCAACCTTCTGTTCCTCCACCGGAACCCCTTCCATGTCCATTAATTTACAGTCGCATGCCTTTGCGCGAAACCCTATAAGATCCAAAACCCCCAAACCTGAAAATCCCCTTTCACCCGATTCGTCGTTCGAATCGCTGAAATCGAAGCTTCTGGCGAAAACCCCTTTGCTATCTTCACCAGATTTCAAAATTTTGCCCTTCAGGAAGGGCTGGCCGTTGGTTTCTTGCAATGGTGGGAAGAGGAACGGTGGTTTGGCGTCTGGGTGGGGCCTGGGTTGGATCAGCTTGGCTGATTGCGCAAGTCTATTGGCCTTGTCTGGGTCGAAGGTAACAGAAGATTTGTTGGTTTATCTCGGTTCTTCTGTTGAAGACGATGCTGTTTATTGGGCCACTGATTTCTCTGGCGCGGATAATTTGGATGCGGAATTGGGTCAAAGGAAGCTCAATTTTATCGAGCTGCGAATGCTCATGGTAGCCACGAATTGGTCGGATACATGGGCAATGGGACAGTTGGCTATTGCTGGTCATGGCAGGGCTTTGCTAGATTGGCATAGAACATCACGTTTCTGTGGGCATTGTAGAGAAAGGACAGTCCCAATGGAAGCTGGGAAGCGAAGGGAATGCTCCAATCAGTCATGCAAATTGAGGATTTTCCCTCGTGTGGATCCTGTTGTTATCATGTTAGTCATTGACCAGGAGAACGACCGCGCACTCTTAAGCAGGCAATCGAGATATGTGCCCCGAAAATGGAGTTGCTTAGCTGGTTTTATGGAGCCTGGAGAAAGCTTGGAAGAAGCTGTGATAAGAGAAACATTGGAAGAGACTGGTATTGAAGTTGGAAAGGTGGTCTATCACAGTTCTCAGCCATGGCCAGTTGGACGAAGCACAATGCCGTGTCAATTGATGGTTGGGTTCTTTGCGTATGCAAAATCGCTCGATATCAAGGTGGACAAGGCTGAGTTAGAAGACGCCCAATGGCACACCAGAGAAGATGTGAAGAAAGCTTTAACATTAAGCGACTACGAGAAGACGCAAAGATCTGCAGCAGCCAAAGTCGAACAACTGTGCAACAGAGTTGAAAGCAGACACAGTCAGTCTGCTGATATCAACGCTGAAGATGGTGGACTTGCTTCCATGTTCTTTCCTGGCCCTCACGCAATCGCTCATCAACTTATCTCCTCTTGGGCTTATCAAGACGATGGAAAATGA

Protein sequence

MANGARAFLTVSKSTSRLLRLPPASSRFFPPFNSSFNGATFCSSTGTPSMSINLQSHAFARNPIRSKTPKPENPLSPDSSFESLKSKLLAKTPLLSSPDFKILPFRKGWPLVSCNGGKRNGGLASGWGLGWISLADCASLLALSGSKVTEDLLVYLGSSVEDDAVYWATDFSGADNLDAELGQRKLNFIELRMLMVATNWSDTWAMGQLAIAGHGRALLDWHRTSRFCGHCRERTVPMEAGKRRECSNQSCKLRIFPRVDPVVIMLVIDQENDRALLSRQSRYVPRKWSCLAGFMEPGESLEEAVIRETLEETGIEVGKVVYHSSQPWPVGRSTMPCQLMVGFFAYAKSLDIKVDKAELEDAQWHTREDVKKALTLSDYEKTQRSAAAKVEQLCNRVESRHSQSADINAEDGGLASMFFPGPHAIAHQLISSWAYQDDGK

Homology

[Close]

BLAST of CmaCh11G005640 vs. ExPASy Swiss-Prot
Match: Q94A82 (Nudix hydrolase 19, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT19 PE=1 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 1.1e-141
Identity = 254/390 (65.13%), Postives = 303/390 (77.69%), Query Frame = 0


Query: 49  SMSINLQSHAFARNPIRSKTPKPENPLSPDSSFESLKSKLLAKTPLLS--SPDFKILPFR 108
           +MS+NL++HAFA NP++SKTPK  +P SP S+FESLK+ L+   P  S  SPDFK+LPF 
Sbjct: 35  TMSMNLKTHAFAGNPLKSKTPKSTDPFSPTSAFESLKT-LIPVIPNHSTPSPDFKVLPFS 94

Query: 109 KGWPLVSCNGGKRNGGLASGWGLGWISLADCASLLALSGSKVTEDLLVYLGSSVEDDAVY 168
           KG PLV  +GG  N      W LGW+SLADC  LLA  G  + ED LVYLG  +E+D VY
Sbjct: 95  KGRPLVFSSGGDAN--TTPIWHLGWVSLADCKVLLASCGVDLNEDSLVYLGPKLEEDLVY 154

Query: 169 WATDFSGADNLDAELGQRKLNFIELRMLMVATNWSDTWAMGQLAIAGHGRALLDWHRTSR 228
           WA D +  D   +ELG RKL F+ELR LMVA +W+D  AM +LAIAG+ RALL+WH  S+
Sbjct: 155 WAVDLA-EDGFVSELGGRKLCFVELRTLMVAADWADQRAMDELAIAGNARALLEWHNVSQ 214

Query: 229 FCGHCRERTVPMEAGKRRECSNQSCKLRIFPRVDPVVIMLVIDQENDRALLSRQSRYVPR 288
           FCG C  +T P EAG+R++CS+++C+ R++PRVDPVVIMLVID+ENDRALLSRQSRYVPR
Sbjct: 215 FCGSCGSKTFPKEAGRRKQCSDETCRKRVYPRVDPVVIMLVIDRENDRALLSRQSRYVPR 274

Query: 289 KWSCLAGFMEPGESLEEAVIRETLEETGIEVGKVVYHSSQPWPVGRSTMPCQLMVGFFAY 348
            WSCLAGF+EPGESLEEAV RET EETGIEVG VVYHSSQPWPVG S+MPCQLM+GFFA+
Sbjct: 275 MWSCLAGFIEPGESLEEAVRRETWEETGIEVGDVVYHSSQPWPVGPSSMPCQLMLGFFAF 334

Query: 349 AKSLDIKVDKAELEDAQWHTREDVKKALTLSDYEKTQRSAAAKVEQLCNRVESRHSQSAD 408
           AK+LDI VDK ELEDAQWH+RE+VKKAL +++Y K QR+AAAKVEQ+C  VE   S S D
Sbjct: 335 AKTLDINVDKEELEDAQWHSREEVKKALAVAEYRKAQRTAAAKVEQICKGVERSQSLSTD 394

Query: 409 INAEDGGLASMFFPGPHAIAHQLISSWAYQ 437
            N E G LA MF PGP AIAH LIS+W  Q
Sbjct: 395 FNLESGELAPMFIPGPFAIAHHLISAWVNQ 420

[Close]

BLAST of CmaCh11G005640 vs. ExPASy Swiss-Prot
Match: Q4R7L8 (NAD-capped RNA hydrolase NUDT12 OS=Macaca fascicularis OX=9541 GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.4e-38
Identity = 113/297 (38.05%), Postives = 140/297 (47.14%), Query Frame = 0


Query: 147 KVTEDLLVYLGS---SVEDDAVYWATDFSGADNLDA-ELGQRKLNFIELRMLMVATNWSD 206
           ++ + LL Y G      ED  V W     G D + A E  QR  N   L   M A     
Sbjct: 204 EMKDKLLNYAGEVPREEEDGLVAWFA--LGIDPIAAEEFKQRHENCYFLHPPMPALLQLK 263

Query: 207 TWAMGQLAIAGHGRALLDWHRTSRFCGHCRERTVPMEAGKRRECSNQSCKL------RIF 266
               G +A A   R++L WH   +FC  C   T   E G +R C  + C          +
Sbjct: 264 EKEAGVVAQA---RSVLAWHSRYKFCPTCGNGTKIEEGGYKRVCLKEDCPSLNGVHNTSY 323

Query: 267 PRVDPVVIMLVIDQENDRALLSRQSRYVPRKWSCLAGFMEPGESLEEAVIRETLEETGIE 326
           PRVDPVVIM VI  +  R LL RQ R+ P  ++CLAGF+EPGE++E+AV RE  EE+G++
Sbjct: 324 PRVDPVVIMQVIHPDGTRCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVK 383

Query: 327 VGKVVYHSSQPWPVGRSTMPCQLMVGFFAYAKSLDIKVDKAELEDAQWHTREDVKKALTL 386
           VG V Y S QPWP     MP  LM+G  A A S +IKVDK E+EDA+W TRE V   LT 
Sbjct: 384 VGHVQYVSCQPWP-----MPSSLMIGCLAVAVSTEIKVDKNEIEDARWFTREQVLDVLT- 443

Query: 387 SDYEKTQRSAAAKVEQLCNRVESRHSQSADINAEDGGLASMFFPGPHAIAHQLISSW 434
                                              G   + F P   AIAHQLI  W
Sbjct: 444 ----------------------------------KGKQQAFFVPPSRAIAHQLIKHW 455

[Close]

BLAST of CmaCh11G005640 vs. ExPASy Swiss-Prot
Match: Q9BQG2 (NAD-capped RNA hydrolase NUDT12 OS=Homo sapiens OX=9606 GN=NUDT12 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.8e-38
Identity = 111/297 (37.37%), Postives = 140/297 (47.14%), Query Frame = 0


Query: 147 KVTEDLLVYLGS---SVEDDAVYWATDFSGADNLDA-ELGQRKLNFIELRMLMVATNWSD 206
           ++ + LL Y G      ED  V W     G D + A E  QR  N   L   M A     
Sbjct: 204 EIKDKLLNYAGEVPREEEDGLVAWFA--LGIDPIAAEEFKQRHENCYFLHPPMPALLQLK 263

Query: 207 TWAMGQLAIAGHGRALLDWHRTSRFCGHCRERTVPMEAGKRRECSNQSCKL------RIF 266
               G +A A   R++L WH   +FC  C   T   E G +R C  + C          +
Sbjct: 264 EKEAGVVAQA---RSVLAWHSRYKFCPTCGNATKIEEGGYKRLCLKEDCPSLNGVHNTSY 323

Query: 267 PRVDPVVIMLVIDQENDRALLSRQSRYVPRKWSCLAGFMEPGESLEEAVIRETLEETGIE 326
           PRVDPVVIM VI  +  + LL RQ R+ P  ++CLAGF+EPGE++E+AV RE  EE+G++
Sbjct: 324 PRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVK 383

Query: 327 VGKVVYHSSQPWPVGRSTMPCQLMVGFFAYAKSLDIKVDKAELEDAQWHTREDVKKALTL 386
           VG V Y + QPWP     MP  LM+G  A A S +IKVDK E+EDA+W TRE V   LT 
Sbjct: 384 VGHVQYVACQPWP-----MPSSLMIGCLALAVSTEIKVDKNEIEDARWFTREQVLDVLT- 443

Query: 387 SDYEKTQRSAAAKVEQLCNRVESRHSQSADINAEDGGLASMFFPGPHAIAHQLISSW 434
                                              G   + F P   AIAHQLI  W
Sbjct: 444 ----------------------------------KGKQQAFFVPPSRAIAHQLIKHW 455

[Close]

BLAST of CmaCh11G005640 vs. ExPASy Swiss-Prot
Match: Q9DCN1 (NAD-capped RNA hydrolase NUDT12 OS=Mus musculus OX=10090 GN=Nudt12 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-37
Identity = 91/232 (39.22%), Postives = 117/232 (50.43%), Query Frame = 0


Query: 208 QLAIAGHGRALLDWHRTSRFCGHCRERTVPMEAGKRRECSNQSCKL------RIFPRVDP 267
           +  +    R++L WH   +FC  C   T   E G +R C  ++C          +PRVDP
Sbjct: 264 EAGVVAQARSVLAWHSRYKFCPTCGSATKIEEGGYKRVCVRETCPSLQGVHNTSYPRVDP 323

Query: 268 VVIMLVIDQENDRALLSRQSRYVPRKWSCLAGFMEPGESLEEAVIRETLEETGIEVGKVV 327
           VVIM VI  +  + LL RQ R+ P  ++CLAGF+EPGE++E+AV RE  EE+G++VG V 
Sbjct: 324 VVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQ 383

Query: 328 YHSSQPWPVGRSTMPCQLMVGFFAYAKSLDIKVDKAELEDAQWHTREDVKKALTLSDYEK 387
           Y S QPWP     MP  LM+G  A A S +IKVDK E+EDA+W TRE V   LT      
Sbjct: 384 YVSCQPWP-----MPSSLMIGCLAVAVSTEIKVDKNEIEDARWFTREQVVDVLT------ 443

Query: 388 TQRSAAAKVEQLCNRVESRHSQSADINAEDGGLASMFFPGPHAIAHQLISSW 434
                                         G   + F P   AIAHQLI  W
Sbjct: 444 -----------------------------KGKQQAFFVPPSRAIAHQLIKHW 455

[Close]

BLAST of CmaCh11G005640 vs. ExPASy Swiss-Prot
Match: Q29RH3 (NAD-capped RNA hydrolase NUDT12 OS=Bos taurus OX=9913 GN=NUDT12 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-37
Identity = 91/232 (39.22%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 208 QLAIAGHGRALLDWHRTSRFCGHCRERTVPMEAGKRRECSNQSCKL------RIFPRVDP 267
           +  +    R++L WH   +FC  C   T   E G +R C  + C          +PRVDP
Sbjct: 246 EAGVVAQARSVLAWHSRYKFCPTCGNATKIEEGGYKRVCLKEDCPSLHGVHNTSYPRVDP 305

Query: 268 VVIMLVIDQENDRALLSRQSRYVPRKWSCLAGFMEPGESLEEAVIRETLEETGIEVGKVV 327
           VVIM VI  +  + LL RQ R+ P  ++CLAGF+EPGE++E+AV RE  EE+G++VG V 
Sbjct: 306 VVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQ 365

Query: 328 YHSSQPWPVGRSTMPCQLMVGFFAYAKSLDIKVDKAELEDAQWHTREDVKKALTLSDYEK 387
           Y S QPWP     MP  LM+G  A A S +IKVDK E+EDA+W TRE V   LT      
Sbjct: 366 YVSCQPWP-----MPSSLMIGCLAVAVSTEIKVDKNEIEDARWFTREQVVDVLT------ 425

Query: 388 TQRSAAAKVEQLCNRVESRHSQSADINAEDGGLASMFFPGPHAIAHQLISSW 434
                                         G   + F P   AIAHQLI  W
Sbjct: 426 -----------------------------KGKQQAFFVPPSRAIAHQLIKHW 437

[Close]

BLAST of CmaCh11G005640 vs. TAIR 10
Match: AT5G20070.1 (nudix hydrolase homolog 19 )

HSP 1 Score: 504.6 bits (1298), Expect = 8.0e-143
Identity = 254/390 (65.13%), Postives = 303/390 (77.69%), Query Frame = 0


Query: 49  SMSINLQSHAFARNPIRSKTPKPENPLSPDSSFESLKSKLLAKTPLLS--SPDFKILPFR 108
           +MS+NL++HAFA NP++SKTPK  +P SP S+FESLK+ L+   P  S  SPDFK+LPF 
Sbjct: 35  TMSMNLKTHAFAGNPLKSKTPKSTDPFSPTSAFESLKT-LIPVIPNHSTPSPDFKVLPFS 94

Query: 109 KGWPLVSCNGGKRNGGLASGWGLGWISLADCASLLALSGSKVTEDLLVYLGSSVEDDAVY 168
           KG PLV  +GG  N      W LGW+SLADC  LLA  G  + ED LVYLG  +E+D VY
Sbjct: 95  KGRPLVFSSGGDAN--TTPIWHLGWVSLADCKVLLASCGVDLNEDSLVYLGPKLEEDLVY 154

Query: 169 WATDFSGADNLDAELGQRKLNFIELRMLMVATNWSDTWAMGQLAIAGHGRALLDWHRTSR 228
           WA D +  D   +ELG RKL F+ELR LMVA +W+D  AM +LAIAG+ RALL+WH  S+
Sbjct: 155 WAVDLA-EDGFVSELGGRKLCFVELRTLMVAADWADQRAMDELAIAGNARALLEWHNVSQ 214

Query: 229 FCGHCRERTVPMEAGKRRECSNQSCKLRIFPRVDPVVIMLVIDQENDRALLSRQSRYVPR 288
           FCG C  +T P EAG+R++CS+++C+ R++PRVDPVVIMLVID+ENDRALLSRQSRYVPR
Sbjct: 215 FCGSCGSKTFPKEAGRRKQCSDETCRKRVYPRVDPVVIMLVIDRENDRALLSRQSRYVPR 274

Query: 289 KWSCLAGFMEPGESLEEAVIRETLEETGIEVGKVVYHSSQPWPVGRSTMPCQLMVGFFAY 348
            WSCLAGF+EPGESLEEAV RET EETGIEVG VVYHSSQPWPVG S+MPCQLM+GFFA+
Sbjct: 275 MWSCLAGFIEPGESLEEAVRRETWEETGIEVGDVVYHSSQPWPVGPSSMPCQLMLGFFAF 334

Query: 349 AKSLDIKVDKAELEDAQWHTREDVKKALTLSDYEKTQRSAAAKVEQLCNRVESRHSQSAD 408
           AK+LDI VDK ELEDAQWH+RE+VKKAL +++Y K QR+AAAKVEQ+C  VE   S S D
Sbjct: 335 AKTLDINVDKEELEDAQWHSREEVKKALAVAEYRKAQRTAAAKVEQICKGVERSQSLSTD 394

Query: 409 INAEDGGLASMFFPGPHAIAHQLISSWAYQ 437
            N E G LA MF PGP AIAH LIS+W  Q
Sbjct: 395 FNLESGELAPMFIPGPFAIAHHLISAWVNQ 420

The following BLAST results are available for this feature:

BLAST of CmaCh11G005640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94A82	1.1e-141	65.13	Nudix hydrolase 19, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT19 PE=1...	[more]
Q4R7L8	2.4e-38	38.05	NAD-capped RNA hydrolase NUDT12 OS=Macaca fascicularis OX=9541 GN=NUDT12 PE=2 SV...	[more]
Q9BQG2	6.8e-38	37.37	NAD-capped RNA hydrolase NUDT12 OS=Homo sapiens OX=9606 GN=NUDT12 PE=1 SV=1	[more]
Q9DCN1	1.2e-37	39.22	NAD-capped RNA hydrolase NUDT12 OS=Mus musculus OX=10090 GN=Nudt12 PE=1 SV=1	[more]
Q29RH3	1.5e-37	39.22	NAD-capped RNA hydrolase NUDT12 OS=Bos taurus OX=9913 GN=NUDT12 PE=2 SV=1	[more]

BLAST of CmaCh11G005640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20070.1	8.0e-143	65.13	nudix hydrolase homolog 19	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 302..317 score: 52.11 coord: 288..302 score: 40.63
IPR015375	NADH pyrophosphatase-like, N-terminal	PFAM	PF09296	NUDIX-like	coord: 146..221 e-value: 1.1E-7 score: 32.4
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 262..379 e-value: 9.5E-17 score: 61.3
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 257..387 score: 17.115177
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 258..436 e-value: 1.2E-32 score: 114.3
None	No IPR available	GENE3D	3.90.79.20		coord: 131..257 e-value: 5.9E-16 score: 60.8
None	No IPR available	PANTHER	PTHR42904:SF4	NUDIX FAMILY HYDROLASE	coord: 50..438
None	No IPR available	PANTHER	PTHR42904	NUDIX HYDROLASE, NUDC SUBFAMILY	coord: 50..438
None	No IPR available	CDD	cd03429	NADH_pyrophosphatase	coord: 261..434 e-value: 2.28566E-62 score: 196.219
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 293..314
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 209..376

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G005640.1	CmaCh11G005640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000210	NAD+ diphosphatase activity
molecular_function	GO:0016787	hydrolase activity