CmaCh11G005400 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTTGTTTGGAGCCACATTACCGACTAACTAGTTGCTAAAAGAGAAAACCAAACAGCCAAACTTTGTGCGTACACGGTTTTCTTGGTCCTCACACACCCGACGTCTCAGATTTCATATTCAATTGCCACTAATTCTCCTATAAAAATACCAGGCGCTACCGCCATTGTGAAGGAACTGATACATACCAGGCAAGAACAACTTCATATGCAATAACAAGCTCAAGAATACCTTCGAAACAATGATTCTGAGAAGCGCTTCGACTCCCCTCTTCAATTCATGGTTACACCATTCAAGAGATTCATACCTGGAGCCGGAGATCGTGAACCAAATCCCTAGGGCGCGTTCCATTGTGCTCTGTTGCTCACCCAGTTGCACATCTCCGATAATCGATGACTCACCCAGGAAGATTACTCGGGCGTTGTCCGAGACGGATCTTCGAGACATGTCCATGAATAAGATGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGGTTGACGAAGAGAGGGATGTAATCGGGTTTAGCCGCTCCAAAACGGCGTCGTTGAGGCGTGAATCGATTTCTGAAACTGGGGATAGGGATGGTGGGTTTGTTAATGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCAGTGGCGGCGGAGGATCCGACGGTGGCGACGATGGGAGTTTCGGGATTGGAGATTCGAATCATGGAAATGACAATACGGATCTGCACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCACGGTTCTTGAAAGAGGTATATCCAATTGCTATATCATTGAAGAAAAACTCTTATCTAATTTCGAACATTACTGGTTTTTGGTATTTACAATGATTTTTACGGGTAATAGGTACGTGGGGATCTTGTAAAAGCTCAAGAATATTGTGGAAGGGCGATTTTGAGCAATCCAGGCGATGGTAATGTCTTGTCTATGTACGCTGATCTGATATGGGAAACTCAGAAGGACACTCCAAGAGCCGAGAGTTACTTCAATCAAGCCGTTCAAGCTGCCCCTAATGACTGGTAAGCTTTTAGATTATTTGATGATGAACTTCACACTTTTTCATGAGAGTTATGGTTGTTTAATGTCATATTGATTGCTCTTATGGTGCAGCTATGTTCTAGCATCATATGCACGGTTTCTTTGGGATGCTGAAGAAGACGAAGAAGAAGATGGCTTAATCGAAAAGCCAGCGACAAGCTTCTTTCAAGGAGTTCATACCCCACCTCCTCTTGCTGCCGCATCTTAA ATCTTTGTTTGGAGCCACATTACCGACTAACTAGTTGCTAAAAGAGAAAACCAAACAGCCAAACTTTGTGCGTACACGGTTTTCTTGGTCCTCACACACCCGACGTCTCAGATTTCATATTCAATTGCCACTAATTCTCCTATAAAAATACCAGGCGCTACCGCCATTGTGAAGGAACTGATACATACCAGGCAAGAACAACTTCATATGCAATAACAAGCTCAAGAATACCTTCGAAACAATGATTCTGAGAAGCGCTTCGACTCCCCTCTTCAATTCATGGTTACACCATTCAAGAGATTCATACCTGGAGCCGGAGATCGTGAACCAAATCCCTAGGGCGCGTTCCATTGTGCTCTGTTGCTCACCCAGTTGCACATCTCCGATAATCGATGACTCACCCAGGAAGATTACTCGGGCGTTGTCCGAGACGGATCTTCGAGACATGTCCATGAATAAGATGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGGTTGACGAAGAGAGGGATGTAATCGGGTTTAGCCGCTCCAAAACGGCGTCGTTGAGGCGTGAATCGATTTCTGAAACTGGGGATAGGGATGGTGGGTTTGTTAATGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCAGTGGCGGCGGAGGATCCGACGGTGGCGACGATGGGAGTTTCGGGATTGGAGATTCGAATCATGGAAATGACAATACGGATCTGCACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCACGGTTCTTGAAAGAGGTACGTGGGGATCTTGTAAAAGCTCAAGAATATTGTGGAAGGGCGATTTTGAGCAATCCAGGCGATGGTAATGTCTTGTCTATGTACGCTGATCTGATATGGGAAACTCAGAAGGACACTCCAAGAGCCGAGAGTTACTTCAATCAAGCCGTTCAAGCTGCCCCTAATGACTGCTATGTTCTAGCATCATATGCACGGTTTCTTTGGGATGCTGAAGAAGACGAAGAAGAAGATGGCTTAATCGAAAAGCCAGCGACAAGCTTCTTTCAAGGAGTTCATACCCCACCTCCTCTTGCTGCCGCATCTTAA ATGATTCTGAGAAGCGCTTCGACTCCCCTCTTCAATTCATGGTTACACCATTCAAGAGATTCATACCTGGAGCCGGAGATCGTGAACCAAATCCCTAGGGCGCGTTCCATTGTGCTCTGTTGCTCACCCAGTTGCACATCTCCGATAATCGATGACTCACCCAGGAAGATTACTCGGGCGTTGTCCGAGACGGATCTTCGAGACATGTCCATGAATAAGATGAAACCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGGTTGACGAAGAGAGGGATGTAATCGGGTTTAGCCGCTCCAAAACGGCGTCGTTGAGGCGTGAATCGATTTCTGAAACTGGGGATAGGGATGGTGGGTTTGTTAATGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCAGTGGCGGCGGAGGATCCGACGGTGGCGACGATGGGAGTTTCGGGATTGGAGATTCGAATCATGGAAATGACAATACGGATCTGCACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCACGGTTCTTGAAAGAGGTACGTGGGGATCTTGTAAAAGCTCAAGAATATTGTGGAAGGGCGATTTTGAGCAATCCAGGCGATGGTAATGTCTTGTCTATGTACGCTGATCTGATATGGGAAACTCAGAAGGACACTCCAAGAGCCGAGAGTTACTTCAATCAAGCCGTTCAAGCTGCCCCTAATGACTGCTATGTTCTAGCATCATATGCACGGTTTCTTTGGGATGCTGAAGAAGACGAAGAAGAAGATGGCTTAATCGAAAAGCCAGCGACAAGCTTCTTTCAAGGAGTTCATACCCCACCTCCTCTTGCTGCCGCATCTTAA MILRSASTPLFNSWLHHSRDSYLEPEIVNQIPRARSIVLCCSPSCTSPIIDDSPRKITRALSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSKTASLRRESISETGDRDGGFVNVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDTPRAESYFNQAVQAAPNDCYVLASYARFLWDAEEDEEEDGLIEKPATSFFQGVHTPPPLAAAS Homology
BLAST of CmaCh11G005400 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 241.5 bits (615), Expect = 8.4e-64 Identity = 151/278 (54.32%), Postives = 189/278 (67.99%), Query Frame = 0
BLAST of CmaCh11G005400 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 188.3 bits (477), Expect = 8.4e-48 Identity = 131/301 (43.52%), Postives = 175/301 (58.14%), Query Frame = 0
BLAST of CmaCh11G005400 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 147.9 bits (372), Expect = 1.3e-35 Identity = 109/267 (40.82%), Postives = 153/267 (57.30%), Query Frame = 0
BLAST of CmaCh11G005400 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 141.7 bits (356), Expect = 9.0e-34 Identity = 90/206 (43.69%), Postives = 114/206 (55.34%), Query Frame = 0
BLAST of CmaCh11G005400 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 93.2 bits (230), Expect = 3.7e-19 Identity = 51/119 (42.86%), Postives = 76/119 (63.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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