|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGCCCAGCCCAAGCGAAGAGGAAGAAGGAGAAGAAGGAGGCTTGGAAGAGCTCCTATGGGCCCAGCCCAAGTGAAGCCCACTTATATGTAGTCCATAATATTTGGTGGGCCTCTGTGCTTACGGACCCTGAGGTAGAGAGTTGTGGGCTTTCTGGTCCAGTTAGGAAAAAGAAAAAATGGCCCAAAAATCAATTAACAATATTTTATTAAAAAAGAAAAATAGAATAATTAAAAATAAGGCCAATGGACCTGCCGCGAAGTCCAGTACCCAAAAGAAGAAAAAGGAAAAACCCAAAATTAAAAAAAGAAAAAAAAAGAAGGAAAGTCTTCCCCGAATCCTTATCTACCAAACTGAGTCCCTCTGCTAAAAACTAAGGTCCAATTAGCTTTCTCGGGTTAGTTTTGAAGCCCAATCTCCGATTCTCTCTCTTTCTCTCTATTTCGGTGCTTATTTCCAGGCTCCATCGCTTGCCGGACCGGAAAGTCAAGGCAGGGCCAGACCAGACCAGACCAGACCAGACCAGCTCGGGTCTCTGTTCGTGGATCTCATTCGAAACCACGGGTAAAATCCGAGCTCTTTTTCTGACGATTTTGAAATCGATGAAGGTTTTTCCTGTTTTCCTTGACTGTATTCACTTTCAGTTTGATGGAATTTCGTTTTCTGGAGTTGTTGGTTTCGGAATTGCGTGGTGTTGTTTTATTTTTGTTTCTGGTGATTTCGAGATGGGGAATTTAGGTGGAAGTCTTCGTTCTTCTGTTATTTGTTGGTCCGGAAATGAGGTTTTGTTTTCGTTAATGCTGTGTTCAAAATTCAGTGTCTGGTGGGTTTTTCCATTAAAACCTGGGTAGCTGGGCTTGAAATGCCCAAATCTTCTTCAAACCCTAGATCTGAAAACTCGTCTCTTTCGACTGCTATTTCCTAGCCCATCTTAGATATAGTTTTTTTTTATTATTACCCATTTTAGCCTCACGGTTCCTCCATGTGGACTACCGTGATTCGGGTGAAATCTCTTAAGTTTGAATTCTGAAAGTGGCTCTAGGTGGGCCGAATGTCTTTTCACAATAATTTGACCCGATTTTCTTTAGTGGGCCCGGGCTAAGCCCATTATTCGGGTTGGAGTTGGGATTTGTTTCTTGTTTAACCTTTTTTTTTAAGACCTCTCTCTCGAGCCGCCTCTAAAACTGAGCTGCCGGTTGGGCTTTGGGGACTTTCACAAATCTGATTGATATGACTATTGAGACGGATCTTCTTCGGTTCCCTATGCTTTCTGGGTTTGGGAAAATGGTATTTTTGCCTTTACTTTTGTTTTTTTGGGTTCGAGTCCGACTTACTAATGTAGCCATTCAATTCTGCTTGCGCCTGTTTCCTTCGGACCTGGGTTCGAATCCGACTTCCCAACGTGACAAATGGGCACATGGTTTATTTTGTTGGCGTCTCGAGTGATTTCATTTGCTTTGTCTTTTGAAATAGCGTATTATTCCACTCGCTCAGACTTCAGAGTGGGATTCTATCGATTATGCCTTCGATGCTTCATTGGCTGTGTCTAGTTTATATTGTTCTTACCAGCCTATTTAATTCATTTGATAAGGGTAATGTAACAATAAATGGGTTGGAGGGAATGCATTGTGCCCACCTACTTAGATACGAGTTTTCTTGGCAAACAAATTTTGTTGGACATGCAATTTGATCCATGCCTCGTGTTAAACAAATATGGTATCATTTTAGCTTGGTCAAATACCCATATTTCTGCTCTAAGAATGAGTGCATTCGATGTGTATTTATTTATTTATTTTTACTTTGCTGCACAGGAAATTATCTTCCCATACGAAATGGCAACTCCTGATGAAGAAAACATGGCAACTCCGGGCAAAGAGATCGTGTTGGTCCATCATGATGAAGACCATAATATGACAACTCCAAATGGTGAAAACATGATAACTCATGAAGATGAATTAATGGAGACTCCTGATACAGACAAGCTGGGATCACCAGATGAACATAATGAACTCGCTTTAGTCGAAGTACAGCCTAACAAGAGGAGGAAGAAGAAGTCTATTGTCTGGGAACACTTCACTATAGAGTCTGTGAGTGCTGATTGCAGGCGGGCGTACTGTAAACAATGCAAGCAAAGCTTTGCATATAGTACAGGATCCAAAGTTGCGGGCACTAGCCATTTGAAGAGGCACATTGCTAAAGGAACTTGTGCTGCACTTTTGCGTGGTCAGGATAAGAATCAGTTGGTGGCTACCTATACCCCACCTTCAAAAGGGACTGTTAGTGATACACCAAAAAGACGGTATCGAACTTCTAGCTCGCCTTATGTTATGTTTGATCAGGATCGTTGCCGTCAAGACATTGCCCGGATGGTCATCATGCATGACTATCCACTTCATATGGTTGAGGATTCTGGATTTGTATCATTTGTCAAAAACCTTCAGCCTCGATTCAACATGTTGAGCTTCAACACTGTTCAAGGGGATTGTGTTGGAACTTATTTAATGGAGAAACAAAATCTAAGTAAGTTTATAGAAGCTATCCCGGGACGTATATGCCTTACCCTTGACATGTGGAGTTCTAGTCGATCAGTAGGTTACGTGTTTATTATGGGTAGTTTTATTGACAGTGAATGGAAGTTGCATAGACGGGTTTTGAATGTTGTAATGGAACAATATCCAGAATCACCTAATGCACTTAGCCATGCCGTTGCTGTATGTCTCTCTGATTGGAGATTAGATGGGAAGTTATTCTCTCTTACGTTTAATCTACAGAATGAAGCTGCCCTTGACAATCTCAGGCTCCTAGTTGCCATTAAGAACCCCCTTATTCTCAATGGTCAATTTTTGGTTGGAAGTTGTATTGCCTGGACTTTAAGCGACATTGCAAAAGATGTATTAGATGCAGGAGAAAATACAATAAGGAAAATTCGGGATAGCGTGAAATACGTGACAACCTCCGATTCTCACGAGGAAAAGTTTTTAGAGCTAAGGCAACAACTTCAAGTGCCAAGTGAGAGAAATCTCTCCCTTGATGATCAAATGCAATGGAATACAACCTATCATATGTTGGTGGCTGCTTCAGAGATGAAAGAAGTATTTTCTTGTTTGGGTACCTCTGATCCTGATTATAAGGAAGCTCCATCAATGGAAGATTGGAAGTTGGTTGAAATTCTCTGCACATACCTGAAACTTCTTTTTGATGCAGCAAACATCCTTACCACCACAACTCACCCAACTGCTATTACCGTCTTTCATGAAGTGTGGAGAATTCATTCGGAGTTGTCTCGGGCGGTGACGAGTGAGGATCCCTTCATAAGCAACCTTAGTAAAAGGATGCTAGAAAAGTTTGATAAATATTGGAAAGATTGTAGCTTAGTCTTGGCAGCTGCTGTAGTGATGGATCCACGGTTCAAGATGAAGCTTGTTGAGTTTAGTTTCACCAAAGTCTATGGTGAAGAAGCTCCTGCATACATTAAGGCTGTTGATGATGGAATTCATGAGCTCTTTGATGAGTATGTGGCACTGCCTCTACCCTTAACCCCAACCTATGCCCAAGATGGAGGTGCTGATGGTAACATGAAGGCAGAAGATTCCCAGGGAAATCTTCTGTCAGACAATGGATTTACAGATTTTGATGTCTACATCATGGAGACGACTAGCCATCAAACGAAATCAGAGCTCGATCGGTATTTGGAAGATTCTTTGTTACCCCGTGTGCAAGACTTTGATCTATTGGGATGGTGGAAATTGAACAAGTTCAAGTATCCTACTCTTTCAAAGATGGCTCGTGATATCTTGTCTATTCCTGTTTCTTCACTTCCTCCTGACTCGGTATTTATAACCAAAAGGAAGAAATTGGATCCATATCGCTCCTCCTTGCGTCCCGAGACGGTGGAAGCGATGATATGTTCCAAGGACTGGATGCAGTCTGGATTAACCGAAGTGTCTAATGCCCTGGTAAGAATGGAATATTAGTCAATGTTTAGGTCTGTTTAGCTTTTGTTCATAAGTTGCTATGTGACATCTCTCTTTAGGTTCTACTTTGGTATTAGGTTAACAGTTCTTGTACCATTTAAGGCAATTGTAATTCATCCTTAAAACTAGATTCTAGAAAAAAAGTTTTAACTCTGTGATCATATGTGCTGCTTTCTAGGAATCGTTCGGTACACCTTGTTCAAGAATTGCCGTAAATTATTGAGCTAATGTTGTCTTATATATTATCACATGCTTCATACATTTCTCATTTGGCGTTCATCTGTCGAACTACGGGACATGGAGTTAAAAAAAGACATTTTTACATCTCACCATGTTTGAATTTCGACTTCCATAATTATGATATTATATTACATCTCACCATGGTTGAGGATGAATTTAGTTGATCTTTTTTTAGAGGAACAAATGATGATACAAAAAACCTATCACATCAGCTCGATGATGACTCGCCCTTCACAGACTAGCTGTCCCACACCTACCTTTTCTTTTTTGGATCAATATAAGCAATAACTCAAGAATCCCGTTTGAGGCGCTAGAAAGGTTCTTATGTTTAGGTCATAATTGCGGTTGATAAAAAAATGTGGCCCATGGATAAAGAGAGAGCAATTAAGAAAACTAGTTCACTTAAATAGTATCCCATTAGTAACTTAATATTTCTGTTATTTTAAGGAAAAATGTTCCCAAAGTTGTCTAATTATTGATAAAATAACATAAGAAAGTTATTTAGGTTCAATTCGGCATCAAATACTTCACGACTCCATCCCAAAACAGAGGCAGACGGCAGAGTTTTGTCATGGTCGAAAGGAATCCTATAACCGGCTGCCAATGA mRNA sequence ATGGGCCCAGCCCAAGCGAAGAGGAAGAAGGAGAAGAAGGAGGCTTGGAAGAGCTCCTATGGGCCCAGCCCAAGCTCCATCGCTTGCCGGACCGGAAAGTCAAGGCAGGGCCAGACCAGACCAGACCAGACCAGACCAGCTCGGGTCTCTGTTCGTGGATCTCATTCGAAACCACGGGAAATTATCTTCCCATACGAAATGGCAACTCCTGATGAAGAAAACATGGCAACTCCGGGCAAAGAGATCGTGTTGGTCCATCATGATGAAGACCATAATATGACAACTCCAAATGGTGAAAACATGATAACTCATGAAGATGAATTAATGGAGACTCCTGATACAGACAAGCTGGGATCACCAGATGAACATAATGAACTCGCTTTAGTCGAAGTACAGCCTAACAAGAGGAGGAAGAAGAAGTCTATTGTCTGGGAACACTTCACTATAGAGTCTGTGAGTGCTGATTGCAGGCGGGCGTACTGTAAACAATGCAAGCAAAGCTTTGCATATAGTACAGGATCCAAAGTTGCGGGCACTAGCCATTTGAAGAGGCACATTGCTAAAGGAACTTGTGCTGCACTTTTGCGTGGTCAGGATAAGAATCAGTTGGTGGCTACCTATACCCCACCTTCAAAAGGGACTGTTAGTGATACACCAAAAAGACGGTATCGAACTTCTAGCTCGCCTTATGTTATGTTTGATCAGGATCGTTGCCGTCAAGACATTGCCCGGATGGTCATCATGCATGACTATCCACTTCATATGGTTGAGGATTCTGGATTTGTATCATTTGTCAAAAACCTTCAGCCTCGATTCAACATGTTGAGCTTCAACACTGTTCAAGGGGATTGTGTTGGAACTTATTTAATGGAGAAACAAAATCTAAGTAAGTTTATAGAAGCTATCCCGGGACGTATATGCCTTACCCTTGACATGTGGAGTTCTAGTCGATCAGTAGGTTACGTGTTTATTATGGGTAGTTTTATTGACAGTGAATGGAAGTTGCATAGACGGGTTTTGAATGTTGTAATGGAACAATATCCAGAATCACCTAATGCACTTAGCCATGCCGTTGCTGTATGTCTCTCTGATTGGAGATTAGATGGGAAGTTATTCTCTCTTACGTTTAATCTACAGAATGAAGCTGCCCTTGACAATCTCAGGCTCCTAGTTGCCATTAAGAACCCCCTTATTCTCAATGGTCAATTTTTGGTTGGAAGTTGTATTGCCTGGACTTTAAGCGACATTGCAAAAGATGTATTAGATGCAGGAGAAAATACAATAAGGAAAATTCGGGATAGCGTGAAATACGTGACAACCTCCGATTCTCACGAGGAAAAGTTTTTAGAGCTAAGGCAACAACTTCAAGTGCCAAGTGAGAGAAATCTCTCCCTTGATGATCAAATGCAATGGAATACAACCTATCATATGTTGGTGGCTGCTTCAGAGATGAAAGAAGTATTTTCTTGTTTGGGTACCTCTGATCCTGATTATAAGGAAGCTCCATCAATGGAAGATTGGAAGTTGGTTGAAATTCTCTGCACATACCTGAAACTTCTTTTTGATGCAGCAAACATCCTTACCACCACAACTCACCCAACTGCTATTACCGTCTTTCATGAAGTGTGGAGAATTCATTCGGAGTTGTCTCGGGCGGTGACGAGTGAGGATCCCTTCATAAGCAACCTTAGTAAAAGGATGCTAGAAAAGTTTGATAAATATTGGAAAGATTGTAGCTTAGTCTTGGCAGCTGCTGTAGTGATGGATCCACGGTTCAAGATGAAGCTTGTTGAGTTTAGTTTCACCAAAGTCTATGGTGAAGAAGCTCCTGCATACATTAAGGCTGTTGATGATGGAATTCATGAGCTCTTTGATGAGTATGTGGCACTGCCTCTACCCTTAACCCCAACCTATGCCCAAGATGGAGGTGCTGATGGTAACATGAAGGCAGAAGATTCCCAGGGAAATCTTCTGTCAGACAATGGATTTACAGATTTTGATGTCTACATCATGGAGACGACTAGCCATCAAACGAAATCAGAGCTCGATCGGTATTTGGAAGATTCTTTGTTACCCCGTGTGCAAGACTTTGATCTATTGGGATGGTGGAAATTGAACAAGTTCAAGTATCCTACTCTTTCAAAGATGGCTCGTGATATCTTGTCTATTCCTGTTTCTTCACTTCCTCCTGACTCGGTATTTATAACCAAAAGGAAGAAATTGGATCCATATCGCTCCTCCTTGCGTCCCGAGACGGTGGAAGCGATGATATGTTCCAAGGACTGGATGCAGTCTGGATTAACCGAAGTGTCTAATGCCCTGGTTCAATTCGGCATCAAATACTTCACGACTCCATCCCAAAACAGAGGCAGACGGCAGAGTTTTGTCATGGTCGAAAGGAATCCTATAACCGGCTGCCAATGA Coding sequence (CDS) ATGGGCCCAGCCCAAGCGAAGAGGAAGAAGGAGAAGAAGGAGGCTTGGAAGAGCTCCTATGGGCCCAGCCCAAGCTCCATCGCTTGCCGGACCGGAAAGTCAAGGCAGGGCCAGACCAGACCAGACCAGACCAGACCAGCTCGGGTCTCTGTTCGTGGATCTCATTCGAAACCACGGGAAATTATCTTCCCATACGAAATGGCAACTCCTGATGAAGAAAACATGGCAACTCCGGGCAAAGAGATCGTGTTGGTCCATCATGATGAAGACCATAATATGACAACTCCAAATGGTGAAAACATGATAACTCATGAAGATGAATTAATGGAGACTCCTGATACAGACAAGCTGGGATCACCAGATGAACATAATGAACTCGCTTTAGTCGAAGTACAGCCTAACAAGAGGAGGAAGAAGAAGTCTATTGTCTGGGAACACTTCACTATAGAGTCTGTGAGTGCTGATTGCAGGCGGGCGTACTGTAAACAATGCAAGCAAAGCTTTGCATATAGTACAGGATCCAAAGTTGCGGGCACTAGCCATTTGAAGAGGCACATTGCTAAAGGAACTTGTGCTGCACTTTTGCGTGGTCAGGATAAGAATCAGTTGGTGGCTACCTATACCCCACCTTCAAAAGGGACTGTTAGTGATACACCAAAAAGACGGTATCGAACTTCTAGCTCGCCTTATGTTATGTTTGATCAGGATCGTTGCCGTCAAGACATTGCCCGGATGGTCATCATGCATGACTATCCACTTCATATGGTTGAGGATTCTGGATTTGTATCATTTGTCAAAAACCTTCAGCCTCGATTCAACATGTTGAGCTTCAACACTGTTCAAGGGGATTGTGTTGGAACTTATTTAATGGAGAAACAAAATCTAAGTAAGTTTATAGAAGCTATCCCGGGACGTATATGCCTTACCCTTGACATGTGGAGTTCTAGTCGATCAGTAGGTTACGTGTTTATTATGGGTAGTTTTATTGACAGTGAATGGAAGTTGCATAGACGGGTTTTGAATGTTGTAATGGAACAATATCCAGAATCACCTAATGCACTTAGCCATGCCGTTGCTGTATGTCTCTCTGATTGGAGATTAGATGGGAAGTTATTCTCTCTTACGTTTAATCTACAGAATGAAGCTGCCCTTGACAATCTCAGGCTCCTAGTTGCCATTAAGAACCCCCTTATTCTCAATGGTCAATTTTTGGTTGGAAGTTGTATTGCCTGGACTTTAAGCGACATTGCAAAAGATGTATTAGATGCAGGAGAAAATACAATAAGGAAAATTCGGGATAGCGTGAAATACGTGACAACCTCCGATTCTCACGAGGAAAAGTTTTTAGAGCTAAGGCAACAACTTCAAGTGCCAAGTGAGAGAAATCTCTCCCTTGATGATCAAATGCAATGGAATACAACCTATCATATGTTGGTGGCTGCTTCAGAGATGAAAGAAGTATTTTCTTGTTTGGGTACCTCTGATCCTGATTATAAGGAAGCTCCATCAATGGAAGATTGGAAGTTGGTTGAAATTCTCTGCACATACCTGAAACTTCTTTTTGATGCAGCAAACATCCTTACCACCACAACTCACCCAACTGCTATTACCGTCTTTCATGAAGTGTGGAGAATTCATTCGGAGTTGTCTCGGGCGGTGACGAGTGAGGATCCCTTCATAAGCAACCTTAGTAAAAGGATGCTAGAAAAGTTTGATAAATATTGGAAAGATTGTAGCTTAGTCTTGGCAGCTGCTGTAGTGATGGATCCACGGTTCAAGATGAAGCTTGTTGAGTTTAGTTTCACCAAAGTCTATGGTGAAGAAGCTCCTGCATACATTAAGGCTGTTGATGATGGAATTCATGAGCTCTTTGATGAGTATGTGGCACTGCCTCTACCCTTAACCCCAACCTATGCCCAAGATGGAGGTGCTGATGGTAACATGAAGGCAGAAGATTCCCAGGGAAATCTTCTGTCAGACAATGGATTTACAGATTTTGATGTCTACATCATGGAGACGACTAGCCATCAAACGAAATCAGAGCTCGATCGGTATTTGGAAGATTCTTTGTTACCCCGTGTGCAAGACTTTGATCTATTGGGATGGTGGAAATTGAACAAGTTCAAGTATCCTACTCTTTCAAAGATGGCTCGTGATATCTTGTCTATTCCTGTTTCTTCACTTCCTCCTGACTCGGTATTTATAACCAAAAGGAAGAAATTGGATCCATATCGCTCCTCCTTGCGTCCCGAGACGGTGGAAGCGATGATATGTTCCAAGGACTGGATGCAGTCTGGATTAACCGAAGTGTCTAATGCCCTGGTTCAATTCGGCATCAAATACTTCACGACTCCATCCCAAAACAGAGGCAGACGGCAGAGTTTTGTCATGGTCGAAAGGAATCCTATAACCGGCTGCCAATGA Protein sequence MGPAQAKRKKEKKEAWKSSYGPSPSSIACRTGKSRQGQTRPDQTRPARVSVRGSHSKPREIIFPYEMATPDEENMATPGKEIVLVHHDEDHNMTTPNGENMITHEDELMETPDTDKLGSPDEHNELALVEVQPNKRRKKKSIVWEHFTIESVSADCRRAYCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCAALLRGQDKNQLVATYTPPSKGTVSDTPKRRYRTSSSPYVMFDQDRCRQDIARMVIMHDYPLHMVEDSGFVSFVKNLQPRFNMLSFNTVQGDCVGTYLMEKQNLSKFIEAIPGRICLTLDMWSSSRSVGYVFIMGSFIDSEWKLHRRVLNVVMEQYPESPNALSHAVAVCLSDWRLDGKLFSLTFNLQNEAALDNLRLLVAIKNPLILNGQFLVGSCIAWTLSDIAKDVLDAGENTIRKIRDSVKYVTTSDSHEEKFLELRQQLQVPSERNLSLDDQMQWNTTYHMLVAASEMKEVFSCLGTSDPDYKEAPSMEDWKLVEILCTYLKLLFDAANILTTTTHPTAITVFHEVWRIHSELSRAVTSEDPFISNLSKRMLEKFDKYWKDCSLVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKAVDDGIHELFDEYVALPLPLTPTYAQDGGADGNMKAEDSQGNLLSDNGFTDFDVYIMETTSHQTKSELDRYLEDSLLPRVQDFDLLGWWKLNKFKYPTLSKMARDILSIPVSSLPPDSVFITKRKKLDPYRSSLRPETVEAMICSKDWMQSGLTEVSNALVQFGIKYFTTPSQNRGRRQSFVMVERNPITGCQ
Homology
BLAST of CmaCh11G005260 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 808.9 bits (2088), Expect = 5.1e-233 Identity = 407/704 (57.81%), Postives = 531/704 (75.43%), Query Frame = 0
Query: 66 EMATPDEENMATPGKEIVLVHHDEDHNMTTPNGENMITHEDELMETPDTDKLGSPDEHNE 125
EM +P+ + P KE L +++ + +P + + E+ +E + ++ SP
Sbjct: 9 EMRSPETQ----PIKETALEVYNDTAEIRSPETQPI---EETALEVYNDTEMVSP----- 68
Query: 126 LALVEVQPNKRRKKKSIVWEHFTIESVSADCRRAYCKQCKQSFAYSTGSKVAGTSHLKRH 185
E QP KRRKKKS+VWEHFTIE+V +CRRA+CK C QSFAYS G+KVAGTSHLKRH
Sbjct: 69 ----ETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRH 128
Query: 186 IAKGTCAALL--RGQDKNQLVAT-YTPPSKGTVSDTPKRRYRT--SSSPYVMFDQDRCRQ 245
I KGTC AL+ D N L++T YTP +DTP+RRYR+ ++SPYV F+QD+CRQ
Sbjct: 129 IFKGTCPALIHTHDNDNNPLMSTPYTPK-----TDTPRRRYRSQNNASPYVAFNQDKCRQ 188
Query: 246 DIARMVIMHDYPLHMVEDSGFVSFVKNLQPRFNMLSFNTVQGDCVGTYLMEKQNLSKFIE 305
+IA+M+IMHDYPLHMV+ GFVSFV+++QP F+ +SFN VQGDCV TYL EKQN+ K +E
Sbjct: 189 EIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLE 248
Query: 306 AIPGRICLTLDMWSSSRSVGYVFIMGSFIDSEWKLHRRVLNVVMEQYPESPNALSHAVAV 365
IPGR CLTLD W+S ++GYVFI +IDS+WK+ +++LNV+ME YPE+ ALS AVA
Sbjct: 249 GIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAVAN 308
Query: 366 CLSDWRLDGKLFSLTFN-LQNEAALDNLRLLVAIKNPLILNGQFLVGSCIAWTLSDIAKD 425
C+S+W L+GKLF++TFN + +A++N+R + IKNP IL+GQ ++G+C+A T +AKD
Sbjct: 309 CVSEWGLEGKLFNVTFNHPASNSAVENIRPQLCIKNPGILDGQLVIGNCVARTFGSLAKD 368
Query: 426 VLDAGENTIRKIRDSVKYVTTSDSHEEKFLELRQQLQVPSERNLSLDDQMQWNTTYHMLV 485
VL+ G++ I+ IRDSVK+V TS+SHEE+F EL++QLQVPSE+ LSLDDQ QWNTTY MLV
Sbjct: 369 VLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQVPSEKVLSLDDQTQWNTTYMMLV 428
Query: 486 AASEMKEVFSCLGTSDPDYKEAPSMEDWKLVEILCTYLKLLFDAANILTTTTHPTAITVF 545
AASE+KEVFSCL T+DPDYK+ PS EDW+ VE LCT+LK LF+A + L +T +P+A+T F
Sbjct: 429 AASELKEVFSCLDTADPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFF 488
Query: 546 HEVWRIHSELSRAVTSEDPFISNLSKRMLEKFDKYWKDCSLVLAAAVVMDPRFKMKLVEF 605
HEVW+ S+LSRA+ EDPF++ ++K M EK DKYW+DCSLVLA AVVMDPRFKMKLVEF
Sbjct: 489 HEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEF 548
Query: 606 SFTKVYGEEAPAYIKAVDDGIHELFDEYVALPLPLTPTYAQDGGADGNMKAEDSQGNLLS 665
SF+K++GE+A IK VDDGIHELF EY+ALP P T ++ G AD
Sbjct: 549 SFSKIFGEDAGKNIKTVDDGIHELFTEYMALPSPQNTT-SEGGKAD-------------- 608
Query: 666 DNGFTDFDVYIMETTSHQTKSELDRYLEDSLLPRVQDFDLLGWWKLNKFKYPTLSKMARD 725
G +DFD YIMETT KSELD+YL+++LLPRVQ+FD+L WWK NK KYPTLSKMARD
Sbjct: 609 --GLSDFDTYIMETTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARD 668
Query: 726 ILSIPVSSLPPDSVFITKRKKLDPYRSSLRPETVEAMICSKDWM 764
ILSIPVS+ D VF + +++D Y++SLRPETVEA+IC+++W+
Sbjct: 669 ILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674
BLAST of CmaCh11G005260 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 2.1e-186 Identity = 337/687 (49.05%), Postives = 454/687 (66.08%), Query Frame = 0
Query: 96 PNGENMITHEDELMETPDTDKLGSPDEHNELALVEVQ-----PNKRRKKKSIVWEHFTIE 155
P+ E E + E + L DE LV + ++RR+KKS+VWEHFTIE
Sbjct: 19 PSNEEAHAEEVQGDELVLAEDLAQGDEVQVNGLVSAEMSTPPTSRRRRKKSLVWEHFTIE 78
Query: 156 SVSADCRRAYCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCAALLRGQDKNQLVATYTPP 215
+VS RA CK CKQ+FAYS+GSK+AGTSHLKRHI G+C + + K L
Sbjct: 79 AVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHITLGSCPIIKNQEHKLALTPAVGTD 138
Query: 216 S--KGTVSDTPKRRYRTSSSPYVMFDQDRCRQDIARMVIMHDYPLHMVEDSGFVSFVKNL 275
+ +GTV KRRYR + FDQDR +A+M+I+HDYPLH+V+ F +F+ +L
Sbjct: 139 NDGEGTVERPSKRRYRYTGYANAAFDQDRSCSYLAKMIILHDYPLHIVQQPAFTTFIDSL 198
Query: 276 QPRFNMLSFNTVQGDCVGTYLMEKQNLSKFIEAIPGRICLTLDMWSSSRSVGYVFIMGSF 335
QPRF ++ T++G+ Y EK+NL + +PGRI LT+ +W++S+++GYV + G F
Sbjct: 199 QPRFRVVDVETMEGEVYAVYQKEKENLMQAFSTMPGRISLTIGLWTTSQTLGYVSLAGQF 258
Query: 336 IDSEWKLHRRVLNVVMEQYPESPNALSHAVAVCLSDWRLDGKLFSLTFN---LQNEAALD 395
IDSEWK+HRR+LN +M P S NALS A++ LSDW + KLF++T + ++
Sbjct: 259 IDSEWKIHRRMLNFMMVSSPHSENALSEAISTSLSDWNMKDKLFTITLDNDCSSHDIYSA 318
Query: 396 NLRLLVAIKNPLILNGQFLVGSCIAWTLSDIAKDVLDAGENTIRKIRDSVKYVTTSDSHE 455
NLR ++ KN L+L GQ V C A L+ +A+DV+ + I IR+S+K++ S S E
Sbjct: 319 NLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSRE 378
Query: 456 EKFLELRQQLQVPSERNLSLDDQMQWNTTYHMLVAASEMKEVFSCLGTSDPDYKEAPSME 515
EKF E+ QL++PS + L LD QWNTTY ML+AA + K+ FS L TSD +Y EAPS E
Sbjct: 379 EKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNYNEAPSAE 438
Query: 516 DWKLVEILCTYLKLLFDAANILTTTTHPTAITVFHEVWRIHSELSRAVTSEDPFISNLSK 575
DWK VE C YLKLL+D+A+ + +PT+ FHE W++ ELS A EDP S+++K
Sbjct: 439 DWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQLELSNATGHEDPVFSSIAK 498
Query: 576 RMLEKFDKYWKDCSLVLAAAVVMDPRFKMKLVEFSFTKVYGEEAPAYIKAVDDGIHELFD 635
M E+FDKYWKDC+LVLA AVVMDPRFKMKLVEFS++K+YG EA Y+K VDD +HEL+
Sbjct: 499 DMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYVKVVDDAVHELYK 558
Query: 636 EYVALPLPLTPTYAQDGGADGNMKAEDSQGNLL----SDNGFTDFDVYIME-TTSHQTKS 695
EYVA PLPLTP Y + G DGN G + +G DFD+Y+ E TS TKS
Sbjct: 559 EYVAQPLPLTPAYVEQG--DGNNAPASENGTQATAPSTGDGLVDFDMYLSEIATSQPTKS 618
Query: 696 ELDRYLEDSLLPRVQDFDLLGWWKLNKFKYPTLSKMARDILSIPVSSLPP-DSVFI--TK 755
EL++YL++SL PR+Q+FD+L WWKLN K+PTLS+MARDIL+IP+S + +S+F T
Sbjct: 619 ELEQYLDESLTPRIQEFDILNWWKLNTLKFPTLSRMARDILAIPMSMVSSGNSIFSAGTG 678
Query: 756 RKKLDPYRSSLRPETVEAMICSKDWMQ 765
+ LD YRSSLRPE VEA++C+KDW+Q
Sbjct: 679 TRMLDDYRSSLRPEIVEALVCAKDWLQ 703
BLAST of CmaCh11G005260 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 652.1 bits (1681), Expect = 8.1e-186 Identity = 342/708 (48.31%), Postives = 464/708 (65.54%), Query Frame = 0
Query: 73 ENMATPGKEIVLVHHDEDHNMTTPNGENMI--THEDELMETPDTDKLGSPDEHNELALVE 132
+N+ G EIV NGE + DEL+ D + G + NEL E
Sbjct: 8 DNLVVQGNEIV-----------PSNGEALAEEVQGDELVLAEDLIQ-GDEVQGNELVSAE 67
Query: 133 VQ---PNKRRKKKSIVWEHFTIESVSADCRRAYCKQCKQSFAYSTGSKVAGTSHLKRHIA 192
+ ++RR+KKS+VWEHFTIE+VS RA CK CKQ+FAYS+GSK+AGTSHLKRHI
Sbjct: 68 MSIPPTSRRRRKKSLVWEHFTIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHIT 127
Query: 193 KGTCAALLRGQDKNQLVAT--YTPPSKGTVSDTPKRRYRTSSSPYVMFDQDRCRQDIARM 252
G+C + + K L +GTV KRRYR + FDQ+R +A+M
Sbjct: 128 LGSCPKIKNQEHKLLLTPAGGTDNDGEGTVERPSKRRYRYTGYANAAFDQERSCSYLAKM 187
Query: 253 VIMHDYPLHMVEDSGFVSFVKNLQPRFNMLSFNTVQGDCVGTYLMEKQNLSKFIEAIPGR 312
+I+HDYPLH+V+ F +F+ +LQPRF ++ T++ + Y EK+NL + +PGR
Sbjct: 188 IILHDYPLHIVQQPAFTTFIDSLQPRFRVVDVETMEWEVYAVYQKEKENLMQAFNTMPGR 247
Query: 313 ICLTLDMWSSSRSVGYVFIMGSFIDSEWKLHRRVLNVVMEQYPESPNALSHAVAVCLSDW 372
I L + +W++S+++GYV + G FIDSEWK+HRR+LN +M P S NALS A++ LSDW
Sbjct: 248 ISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPHSENALSEAISTSLSDW 307
Query: 373 RLDGKLFSLTFN---LQNEAALDNLRLLVAIKNPLILNGQFLVGSCIAWTLSDIAKDVLD 432
+ KLF++T + ++ NLR ++ KN L+L GQ V C A L+ +A+DV+
Sbjct: 308 NMKDKLFTITLDNDCSSHDIYSANLRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIA 367
Query: 433 AGENTIRKIRDSVKYVTTSDSHEEKFLELRQQLQVPSERNLSLDDQMQWNTTYHMLVAAS 492
+ I IR+S+K++ S S EEKF E+ QL++PS + L LD QWNTTY ML+AA
Sbjct: 368 SIHGVIYNIRESIKFIKASPSCEEKFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAAL 427
Query: 493 EMKEVFSCLGTSDPDYKEAPSMEDWKLVEILCTYLKLLFDAANILTTTTHPTAITVFHEV 552
+ K+ FS L TSD +Y EAPS EDWK VE C YLKLL+D+A+ + +PT+ FHE
Sbjct: 428 DYKQAFSTLETSDDNYNEAPSAEDWKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEA 487
Query: 553 WRIHSELSRAVTSEDPFISNLSKRMLEKFDKYWKDCSLVLAAAVVMDPRFKMKLVEFSFT 612
W++ ELS A EDP S+++K M E+FDKYWKDC+LVLA AVVMDPRFKMKLVEFS++
Sbjct: 488 WKLQLELSNATGREDPVFSSIAKDMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYS 547
Query: 613 KVYGEEAPAYIKAVDDGIHELFDEYVALPLPLTPTYAQDGGADGNMKAEDSQGNLL--SD 672
K+YG EA Y+K VDD +HEL++EYVA PLPLTP Y + GG + +E+S +
Sbjct: 548 KIYGVEAAKYVKVVDDAVHELYNEYVAQPLPLTPAYVEQGGGNNAPASENSTQATAPSTG 607
Query: 673 NGFTDFDVYIME-TTSHQTKSELDRYLEDSLLPRVQDFDLLGWWKLNKFKYPTLSKMARD 732
+G DFD+Y+ E TS TKSEL++YL++SL PR+Q+FD+L WWKLN KYPTLSKMARD
Sbjct: 608 DGLVDFDMYLSEIATSQPTKSELEQYLDESLTPRIQEFDILNWWKLNTLKYPTLSKMARD 667
Query: 733 ILSIPVSSLPP-DSVFI--TKRKKLDPYRSSLRPETVEAMICSKDWMQ 765
IL+IP+S + +S+F T + LD YRSS RPE VEA++C+KDW+Q
Sbjct: 668 ILAIPMSMVSSGNSIFSAGTGTRMLDDYRSSSRPEIVEALVCAKDWLQ 703
BLAST of CmaCh11G005260 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 602.1 bits (1551), Expect = 9.6e-171 Identity = 313/706 (44.33%), Postives = 449/706 (63.60%), Query Frame = 0
Query: 72 EENMATPGKEIVLVHHDEDHNMTTPNGENMITHEDELMETPDTDKLGSPDEHNELALVEV 131
+EN+ G ++ + HN +MI ++ E + DK+ E + L
Sbjct: 44 QENVMVHGSGEMVQGSEMVHNNEIIQVNDMI----QVNEMVNGDKMAHGHELVGVELTTP 103
Query: 132 QPNKRRKKKSIVWEHFTIESVSADCRRAYCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTC 191
++RR+KKS+VWEHFTIE + RA C CKQ+FAYS GSK++GTSHLKRHI +C
Sbjct: 104 TASRRRRKKSVVWEHFTIEEMPGGVSRASCNLCKQTFAYSCGSKISGTSHLKRHITLASC 163
Query: 192 AALLRGQDKNQL-VATYT-PPSKGTVSDTPKRRYRTSSSPYVMFDQDRCRQDIARMVIMH 251
L K L +AT T +G KR YR++ MFDQDR ++A+M+I+H
Sbjct: 164 PMLKNEDMKLSLPLATVTNNDGEGCAERVAKRHYRSTGYANAMFDQDRTCSNLAKMIILH 223
Query: 252 DYPLHMVEDSGFVSFVKNLQPRFNMLSFNTVQGDCVGTYLMEKQNLSKFIEAIPGRICLT 311
DYPLH+VE GF +F+ +LQPRF ++ +T++G Y E++NL +PGRI LT
Sbjct: 224 DYPLHIVEQRGFTAFIGSLQPRFRVIDVDTIEGQVHSVYQKERENLMHVFSTVPGRISLT 283
Query: 312 LDMWSSSRSVGYVFIMGSFIDSEWKLHRRVLNVVMEQYPESPNALSHAVAVCLSDWRLDG 371
+ +W++S+++GY+ + FID+EW++HRR++N +M P S N+LS A++ LSDW +
Sbjct: 284 VRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPHSENSLSEAISTSLSDWNMKD 343
Query: 372 KLFSLTFNLQNEA----ALDNLRLLVAIKNPLILNGQFLVGSCIAWTLSDIAKDVLDAGE 431
KLF++T + + + + + L K+ +++ GQ V C A L+ +A+DV+ +
Sbjct: 344 KLFTITLDNDPSSHDIYSANMINYLSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVH 403
Query: 432 NTIRKIRDSVKYVTTSDSHEEKFLELRQQLQVPSERNLSLDDQMQWNTTYHMLVAASEMK 491
+ I IR+S+K++ S HE+KF E+ QL++PS + L LD QWNTTY ML+AA + +
Sbjct: 404 SVIYHIRESIKFIKASSVHEDKFAEIALQLEIPSAKTLCLDVTTQWNTTYLMLLAALDYQ 463
Query: 492 EVFSCLGTSDPDYKEAPSMEDWKLVEILCTYLKLLFDAANILTTTTHPTAITVFHEVWRI 551
+VF+ L T D DY EAPS EDWK VE C+YL LL+D+A+ + +PT+ FHE W++
Sbjct: 464 QVFASLETCDGDYNEAPSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHEAWKL 523
Query: 552 HSELSRAVTSEDPFISNLSKRMLEKFDKYWKDCSLVLAAAVVMDPRFKMKLVEFSFTKVY 611
SELS A+ EDP + +K M E+FDKYWKDC+LVLA AVVMDPRFKMKLVEFS++K++
Sbjct: 524 QSELSNAIAHEDPIFRSTAKIMHERFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIH 583
Query: 612 GEEAPAYIKAVDDGIHELFDEYVALPLPLTPTYAQDGGADGNMKAEDSQGNLLSDNG--F 671
EA Y+K VDD IHEL+ E YA G A+ + D+ + NG
Sbjct: 584 SVEAAKYVKVVDDAIHELYSE-----------YATQGEANRDAHVTDNSAAVTPPNGDEL 643
Query: 672 TDFDVYIME-TTSHQTKSELDRYLEDSLLPRVQDFDLLGWWKLNKFKYPTLSKMARDILS 731
DFD+Y+ E TS + SEL++YLE++L+PR+QDF++L WWKLN K+PTLSKMARD+L+
Sbjct: 644 LDFDIYLSEIATSQPSISELEQYLEEALMPRIQDFEILEWWKLNTIKFPTLSKMARDVLA 703
Query: 732 IPVSSLPP-DSVF---ITKRKKLDPYRSSLRPETVEAMICSKDWMQ 765
IP+S + S+F T + LD YRSSLRPETVEA+ C+KDW+Q
Sbjct: 704 IPMSMVSSGSSIFSATATGSQMLDDYRSSLRPETVEALFCAKDWLQ 734
BLAST of CmaCh11G005260 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3) HSP 1 Score: 520.0 bits (1338), Expect = 4.8e-146 Identity = 288/665 (43.31%), Postives = 408/665 (61.35%), Query Frame = 0
Query: 124 NELAL-VEVQPN---KRRKKKSIVWEHFTIESVSADCRRAYCKQCKQSFAYSTGSKVAGT 183
NELA+ EV P+ + +K+KS +WEHFT+ VS C+RA C C QS AYS+GSK +GT
Sbjct: 36 NELAVHAEVIPSASTRGQKRKSAIWEHFTLVDVSDGCKRASCIHCNQSLAYSSGSKNSGT 95
Query: 184 SHLKRHIAKGTCAALLRGQDKNQLVATYTPPSKGTVSDTPKRRYRTSSSPYVMFDQDRCR 243
SHL RHIA+ +L+ + K++ TY SS+ FDQ+R
Sbjct: 96 SHLTRHIAE--WCRVLKDRQKSRRYTTY-----------------NSSNENASFDQERSC 155
Query: 244 QDIARMVIMHDYPLHMVEDSGFVSFVKNLQPRFNMLSFNTVQGDCVGTYLMEKQNLSKFI 303
+A+M+I++DYPLH+V+ F+SFV ++QP F M+ T++ + YL EK +L + +
Sbjct: 156 LRLAKMIILNDYPLHIVQQPAFLSFVDSVQPNFKMVDIGTIETEVYAIYLKEKDHLQQAL 215
Query: 304 EAIPGRICLTLDMWSSSRSVGYVFIMGSFIDSEWKLHRRVLNVVMEQYPESPNALSHAVA 363
IPGRI LT+ ++++S+ Y+ + FIDSEW+LHRRVL V+M +P+S NA+S A+
Sbjct: 216 ANIPGRISLTVGSLTTNQSIRYISLAAQFIDSEWRLHRRVLKVMMAPWPQSENAVSRAII 275
Query: 364 VCLSDWRLDGKLFSLTFN---LQNEAALDNLRLLVAIKNPLILNGQFLVGSCIAWTLSDI 423
CLSDW + KLF++T ++ NLR ++ N L+L GQ C A L+ +
Sbjct: 276 KCLSDWNMQDKLFTITLEHDCSSHDIYSANLRNHLSGDNILMLKGQTFAVRCYANILNAV 335
Query: 424 AKDVLDAGENTIRKIRDSVKYVTTSDSHEEKFLELRQQLQVPSERNLSLDDQMQWNTTYH 483
A VL + N I IR+S+K++ D+HE KF E+ +L++ S +L LD +WNTTY
Sbjct: 336 AHGVLASVHNVIYLIRESIKFIKADDAHENKFAEIAVELKITSNNSLCLDVTSEWNTTYL 395
Query: 484 MLVAASEMKEVFSCLGTSDPDYKEAPSMEDWKLVEILCTYLKLLFD-AANILTTT-THPT 543
ML+AA + ++VF+ L + +Y APS EDWK VE C +LKLL+ NI++ H T
Sbjct: 396 MLLAALDYRQVFTLLESYYDNYGTAPSTEDWKKVEAACGFLKLLYAFTLNIMSAEGNHQT 455
Query: 544 AITVFHEVWRIHSELSRAVTSEDPFISNLSKRMLEKFDKYWKDCSLVLAAAVVMDPRFKM 603
A FH+ W + EL + D I + + EKFDKYWKDC++VLA AV MDPRFKM
Sbjct: 456 ANMFFHDAWVLQLELQNGMAHGDDVIRGIVIGIHEKFDKYWKDCNVVLAIAVAMDPRFKM 515
Query: 604 KLVEFSFTKVYG-EEAPAYIKAVDDGIHELFDEYVALP--LPLTPTYAQDGGAD------ 663
K+VEF+++K+YG +A Y+K VDD I +L+ EY A P LPL+P Y AD
Sbjct: 516 KMVEFAYSKIYGPTDAAKYVKLVDDAILDLYKEYAAQPELLPLSPIYVDQVPADGLPFIE 575
Query: 664 -GNMKAEDSQGNLLSDNGFTDFDVYIMETTS--HQTKSELDRYLEDSLLPRVQDFDLLGW 723
G A S + G DFD+Y+ E T+ K EL+ YLE++L R DFD+L W
Sbjct: 576 TGGAPATASPSTAAAGAGLVDFDMYLSEVTTMGQPFKHELELYLEEALTQRTPDFDVLKW 635
Query: 724 WKLNKFKYPTLSKMARDILSIPVSSL-PPDSVFITKR--KKLDPYRSSLRPETVEAMICS 765
W+ N KYPTLS+MARD+L+IP+S++ SVF+ + LD YRSSLRPE VEA++C+
Sbjct: 636 WQDNTLKYPTLSRMARDVLAIPMSTVGVGSSVFLPDNGSRSLDDYRSSLRPELVEALLCA 681
BLAST of CmaCh11G005260 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 808.9 bits (2088), Expect = 3.7e-234 Identity = 407/704 (57.81%), Postives = 531/704 (75.43%), Query Frame = 0
Query: 66 EMATPDEENMATPGKEIVLVHHDEDHNMTTPNGENMITHEDELMETPDTDKLGSPDEHNE 125
EM +P+ + P KE L +++ + +P + + E+ +E + ++ SP
Sbjct: 9 EMRSPETQ----PIKETALEVYNDTAEIRSPETQPI---EETALEVYNDTEMVSP----- 68
Query: 126 LALVEVQPNKRRKKKSIVWEHFTIESVSADCRRAYCKQCKQSFAYSTGSKVAGTSHLKRH 185
E QP KRRKKKS+VWEHFTIE+V +CRRA+CK C QSFAYS G+KVAGTSHLKRH
Sbjct: 69 ----ETQPIKRRKKKSMVWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRH 128
Query: 186 IAKGTCAALL--RGQDKNQLVAT-YTPPSKGTVSDTPKRRYRT--SSSPYVMFDQDRCRQ 245
I KGTC AL+ D N L++T YTP +DTP+RRYR+ ++SPYV F+QD+CRQ
Sbjct: 129 IFKGTCPALIHTHDNDNNPLMSTPYTPK-----TDTPRRRYRSQNNASPYVAFNQDKCRQ 188
Query: 246 DIARMVIMHDYPLHMVEDSGFVSFVKNLQPRFNMLSFNTVQGDCVGTYLMEKQNLSKFIE 305
+IA+M+IMHDYPLHMV+ GFVSFV+++QP F+ +SFN VQGDCV TYL EKQN+ K +E
Sbjct: 189 EIAKMIIMHDYPLHMVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLE 248
Query: 306 AIPGRICLTLDMWSSSRSVGYVFIMGSFIDSEWKLHRRVLNVVMEQYPESPNALSHAVAV 365
IPGR CLTLD W+S ++GYVFI +IDS+WK+ +++LNV+ME YPE+ ALS AVA
Sbjct: 249 GIPGRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAVAN 308
Query: 366 CLSDWRLDGKLFSLTFN-LQNEAALDNLRLLVAIKNPLILNGQFLVGSCIAWTLSDIAKD 425
C+S+W L+GKLF++TFN + +A++N+R + IKNP IL+GQ ++G+C+A T +AKD
Sbjct: 309 CVSEWGLEGKLFNVTFNHPASNSAVENIRPQLCIKNPGILDGQLVIGNCVARTFGSLAKD 368
Query: 426 VLDAGENTIRKIRDSVKYVTTSDSHEEKFLELRQQLQVPSERNLSLDDQMQWNTTYHMLV 485
VL+ G++ I+ IRDSVK+V TS+SHEE+F EL++QLQVPSE+ LSLDDQ QWNTTY MLV
Sbjct: 369 VLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQVPSEKVLSLDDQTQWNTTYMMLV 428
Query: 486 AASEMKEVFSCLGTSDPDYKEAPSMEDWKLVEILCTYLKLLFDAANILTTTTHPTAITVF 545
AASE+KEVFSCL T+DPDYK+ PS EDW+ VE LCT+LK LF+A + L +T +P+A+T F
Sbjct: 429 AASELKEVFSCLDTADPDYKKPPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFF 488
Query: 546 HEVWRIHSELSRAVTSEDPFISNLSKRMLEKFDKYWKDCSLVLAAAVVMDPRFKMKLVEF 605
HEVW+ S+LSRA+ EDPF++ ++K M EK DKYW+DCSLVLA AVVMDPRFKMKLVEF
Sbjct: 489 HEVWKTQSDLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEF 548
Query: 606 SFTKVYGEEAPAYIKAVDDGIHELFDEYVALPLPLTPTYAQDGGADGNMKAEDSQGNLLS 665
SF+K++GE+A IK VDDGIHELF EY+ALP P T ++ G AD
Sbjct: 549 SFSKIFGEDAGKNIKTVDDGIHELFTEYMALPSPQNTT-SEGGKAD-------------- 608
Query: 666 DNGFTDFDVYIMETTSHQTKSELDRYLEDSLLPRVQDFDLLGWWKLNKFKYPTLSKMARD 725
G +DFD YIMETT KSELD+YL+++LLPRVQ+FD+L WWK NK KYPTLSKMARD
Sbjct: 609 --GLSDFDTYIMETTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQNKLKYPTLSKMARD 668
Query: 726 ILSIPVSSLPPDSVFITKRKKLDPYRSSLRPETVEAMICSKDWM 764
ILSIPVS+ D VF + +++D Y++SLRPETVEA+IC+++W+
Sbjct: 669 ILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674
BLAST of CmaCh11G005260 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 142.5 bits (358), Expect = 1.5e-33 Identity = 135/661 (20.42%), Postives = 275/661 (41.60%), Query Frame = 0
Query: 117 LGSPDEHNELALVEVQPNKRRKKKSIVWEHFTIESVSADCRRAYCKQCKQSFAYSTGSKV 176
LGS D+ N V P +++ S+ ++F + D + CK C QS++ +T +
Sbjct: 36 LGSSDKSN-----SVPPKRKKTMTSVYLKYF---ETAPDSKTRKCKFCGQSYSIATATGN 95
Query: 177 AGTSHLKRHIAKGTCAALLRGQDKNQLVATYTPPSKGTVSDTPKRRYRTSSSPYVMFDQD 236
G RH AA +V + + P P + S S D D
Sbjct: 96 LGRHLTNRHPGYDKAAA--------DVVTSSSVPQTPPAVVKPSQ----SQSKVPQLDYD 155
Query: 237 RCRQDIARMVIMHDYPLHMVEDSGFVSFVKNLQPRFNMLSFNTVQGDCVGTYLMEKQNLS 296
+ + + + P V+++ + K L+P + + + + ++
Sbjct: 156 HLNWLVLKWLALSSLPPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVK 215
Query: 297 KFIEAIPGRICLTLDMWSSSRSVGYVFIMGSFIDSEWKLHRRVLNVVMEQYPESPNALSH 356
+E I ++ +TL W+S ++ Y+ + G +ID W HR +L++ YP + + +
Sbjct: 216 TTLEHIQSKVSVTLSFWNSYENIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYN 275
Query: 357 AVAVCLSDWRLDGKLFSLTFNLQNEAALDNLRLLVAIKNPLILNGQFLVGSCIAWTLSDI 416
++ L + ++ ++ T + A L +L F C A TL+DI
Sbjct: 276 SLLKVLKTYAIEDRILCCTHDNSENAIHACHSLKEYFDGQKVL--PFCYIPCAAQTLNDI 335
Query: 417 AKDVLDAGENTIRKIRDSVKYVTTSDSHEEKFLELRQQLQVPSERNLSLDDQMQWNTTYH 476
+ L + I K+R+ + + S + F++L Q L +D +W+ Y
Sbjct: 336 IDEGLATIKPIISKVREFTQELNASTELSDDFIQLTTAYQ-EGNWKLPIDASSRWSGNYQ 395
Query: 477 ML-VAASEMKEVFSCLGTSDP--DYKEAPSMEDWKLVEILCTYLKL--LFDAANILTTTT 536
M+ + K + S + ++ + + S + V I+ YL L N + T
Sbjct: 396 MVNILCKASKSLDSVIRKNEDALENRMMLSSVEKNAVTIVHNYLDLDSFHKTTNDMCTNK 455
Query: 537 HPT---AITVFHEVWRIHSELSRAVTSEDPFISNLSKRMLEKFDKY-WKDCSLVLAAAVV 596
T A+ + + + ++ + D ++ ++ M +K Y + C++ +
Sbjct: 456 DLTVGLALLFMDNISEMITTCQKSCHNPD-WLRTCAESMAQKARSYNTQVCNVFTYITAI 515
Query: 597 MDPRFKMKLV-EFSFTKVYGEEAPAYIKAVDDGIHELFDEYVALPLPLTPTYAQDGGADG 656
+DPR K + + E + Y +EA ++ H ++ P +GG +
Sbjct: 516 LDPRIKTEYIPETINLESYIDEARSHFIRNYSSSHFT----SSMTSGYRPQEVDEGGGNI 575
Query: 657 NMKAEDSQGNLLSDNGFTDFDVYIMETTSHQTKSELDRYLEDSLLPRVQDFDLLGWWKLN 716
+ E ++ + S+ EL +YL +S++P D+L WWK+N
Sbjct: 576 SFAEEIARRKRRG-------------SMSNNVVDELTQYLSESIVP--MQTDVLDWWKVN 635
Query: 717 KFKYPTLSKMARDILSIPVSSLPPDSVFITKRKKLDPYRSSLRPETVEAMICSKDWMQSG 768
+YP LS MARD L++ +S P+ +F K +++D + + ++ +++IC + W+++G
Sbjct: 636 SGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEIDKQKYCMPHDSTQSVICIRSWIEAG 653
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9M2N5 | 5.1e-233 | 57.81 | Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=... | [more] |
| Q6AVI0 | 2.1e-186 | 49.05 | Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... | [more] |
| B9FJG3 | 8.1e-186 | 48.31 | Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j... | [more] |
| Q75HY5 | 9.6e-171 | 44.33 | Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j... | [more] |
| Q0JMB2 | 4.8e-146 | 43.31 | Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G42170.1 | 3.7e-234 | 57.81 | BED zinc finger ;hAT family dimerisation domain | [more] |
| AT1G18560.1 | 1.5e-33 | 20.42 | BED zinc finger ;hAT family dimerisation domain | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | SMART | SM00614 | bed5 | coord: 138..194
e-value: 4.6E-14
score: 62.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..17 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 19..45 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..58 |
| None | No IPR available | PANTHER | PTHR23272:SF144 | SUBFAMILY NOT NAMED | coord: 99..769 |
| None | No IPR available | PANTHER | PTHR23272 | BED FINGER-RELATED | coord: 99..769 |
| None | No IPR available | PROSITE | PS51257 | PROKAR_LIPOPROTEIN | coord: 1..29
score: 5.0 |
| IPR025525 | hAT-like transposase, RNase-H fold | PFAM | PF14372 | DUF4413 | coord: 529..627
e-value: 7.0E-33
score: 112.8 |
| IPR008906 | HAT, C-terminal dimerisation domain | PFAM | PF05699 | Dimer_Tnp_hAT | coord: 681..763
e-value: 2.1E-27
score: 94.7 |
| IPR003656 | Zinc finger, BED-type | PROSITE | PS50808 | ZF_BED | coord: 138..198
score: 10.296604 |
| IPR012337 | Ribonuclease H-like superfamily | SUPERFAMILY | 53098 | Ribonuclease H-like | coord: 293..764 |
| IPR036236 | Zinc finger C2H2 superfamily | SUPERFAMILY | 57667 | beta-beta-alpha zinc fingers | coord: 141..189 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0009791 |
post-embryonic development |
| cellular_component |
GO:0005634 |
nucleus |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0046872 |
metal ion binding |
| molecular_function |
GO:0046983 |
protein dimerization activity |
|
