CmaCh11G005150 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G005150
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Armadillo-like helical
Location	Cma_Chr11: 2441508 .. 2442701 (-)
RNA-Seq Expression	CmaCh11G005150
Synteny	CmaCh11G005150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGATTCTTCCAACAAGGACGATAGCCCGCGAGTTCTTCGAGTTCTCGAAGCTCTCAAACAGGCTTCTCATGAGTTACAGGCAAATCCAAGTCCTCGATCCGAGGAGTTCAATTCGCCCACCATTAAAGCTCTGCTCGAGCTCGAGGTTGAATCCGAAAAAATCCTTTCAAGTGATCCAAACCTTTCGATTCTTTCTCAGCACCTTGCGAACCTAAAAACCTTGGTGGAGACGCTTCAGAAGTCCAGAGGTTACAGCCTCAGGTCGTTCTTAACGCGTCGTTTCGCGACAAATTCGGTATCTCAAGTCGCTGGTTCAATCGAGTCGGAGATTCAAGCTTGGATTGATCGCGAGAGCTTGGAGACTCTGGTTCGAGCTCTTAAAGAGCCATCAATCGACGAAAATGAATCGATTAAGCTACTGATTCAGTTCGAGAATCGCCTCGCTCAGGGGTTCAATCGCGAGCTGCAGGATCTCATGCTAAAATCAAAGGTGTTTTCGCTGCTCGAATTGATTGTTTGTAACCCTAACTACTCGAAAACGATCCGGGAGCATTCGGCGTACGCGATTGGGGCTATGGTCCGTTTCAACAAAGACGTATTCGTTGGTCAAGTACTAATAGGACCGACGATTCACGCCCTAGTTCAAGTGGCTTCCTCTCACTCATTAAAAGTTCTCTGTTCCTTAATCAGATTAGTTAGGTCTCCGCTGGTCGAGGAGATCCAGTCAAACGGCGATATACCAAAAATAATAAGCTCATTGAATTGCCGAGACCTGCAAATTAGGGTTTTAGCTATGGATTGCATCGTTGAAATCGGCTATTTCGGCCGCAAAGAGGCTGTAGATACTATGCTGGAAGAGGGCTTGATAGAAAGGCTTTTAGAGCTACAGAGGTCGGAATTGGGCGGCGATTTGATCGGACTGGGGAAACAAACTGCGGAAGAGAGTAGAGGGGTTGTCGCCGGCGGGGTCGAGGGAAGAGAAAGCAGAGAGAAGAGGTTCTTGGAGAGCCATCCATTTGCGAGCTGTGTGGCCAAGTTTGCAGTGCAATTGGAGGTTGGAGAGGGCTTGAGGAAGAGGGAGAAGAGAGCCATTAAGCCTGAAATTTTGAAGAGAGTTCGAAAAGCTTGCGTCTCTGATGCCGAAGCTGCCACTATAATTGCTGAGGTTCTGTGGGGTTCTAGTCCTTGA

mRNA sequence

ATGGACGATTCTTCCAACAAGGACGATAGCCCGCGAGTTCTTCGAGTTCTCGAAGCTCTCAAACAGGCTTCTCATGAGTTACAGGCAAATCCAAGTCCTCGATCCGAGGAGTTCAATTCGCCCACCATTAAAGCTCTGCTCGAGCTCGAGGTTGAATCCGAAAAAATCCTTTCAAGTGATCCAAACCTTTCGATTCTTTCTCAGCACCTTGCGAACCTAAAAACCTTGGTGGAGACGCTTCAGAAGTCCAGAGGTTACAGCCTCAGGTCGTTCTTAACGCGTCGTTTCGCGACAAATTCGGTATCTCAAGTCGCTGGTTCAATCGAGTCGGAGATTCAAGCTTGGATTGATCGCGAGAGCTTGGAGACTCTGGTTCGAGCTCTTAAAGAGCCATCAATCGACGAAAATGAATCGATTAAGCTACTGATTCAGTTCGAGAATCGCCTCGCTCAGGGGTTCAATCGCGAGCTGCAGGATCTCATGCTAAAATCAAAGGTGTTTTCGCTGCTCGAATTGATTGTTTGTAACCCTAACTACTCGAAAACGATCCGGGAGCATTCGGCGTACGCGATTGGGGCTATGGTCCGTTTCAACAAAGACGTATTCGTTGGTCAAGTACTAATAGGACCGACGATTCACGCCCTAGTTCAAGTGGCTTCCTCTCACTCATTAAAAGTTCTCTGTTCCTTAATCAGATTAGTTAGGTCTCCGCTGGTCGAGGAGATCCAGTCAAACGGCGATATACCAAAAATAATAAGCTCATTGAATTGCCGAGACCTGCAAATTAGGGTTTTAGCTATGGATTGCATCGTTGAAATCGGCTATTTCGGCCGCAAAGAGGCTGTAGATACTATGCTGGAAGAGGGCTTGATAGAAAGGCTTTTAGAGCTACAGAGGTCGGAATTGGGCGGCGATTTGATCGGACTGGGGAAACAAACTGCGGAAGAGAGTAGAGGGGTTGTCGCCGGCGGGGTCGAGGGAAGAGAAAGCAGAGAGAAGAGGTTCTTGGAGAGCCATCCATTTGCGAGCTGTGTGGCCAAGTTTGCAGTGCAATTGGAGGTTGGAGAGGGCTTGAGGAAGAGGGAGAAGAGAGCCATTAAGCCTGAAATTTTGAAGAGAGTTCGAAAAGCTTGCGTCTCTGATGCCGAAGCTGCCACTATAATTGCTGAGGTTCTGTGGGGTTCTAGTCCTTGA

Coding sequence (CDS)

ATGGACGATTCTTCCAACAAGGACGATAGCCCGCGAGTTCTTCGAGTTCTCGAAGCTCTCAAACAGGCTTCTCATGAGTTACAGGCAAATCCAAGTCCTCGATCCGAGGAGTTCAATTCGCCCACCATTAAAGCTCTGCTCGAGCTCGAGGTTGAATCCGAAAAAATCCTTTCAAGTGATCCAAACCTTTCGATTCTTTCTCAGCACCTTGCGAACCTAAAAACCTTGGTGGAGACGCTTCAGAAGTCCAGAGGTTACAGCCTCAGGTCGTTCTTAACGCGTCGTTTCGCGACAAATTCGGTATCTCAAGTCGCTGGTTCAATCGAGTCGGAGATTCAAGCTTGGATTGATCGCGAGAGCTTGGAGACTCTGGTTCGAGCTCTTAAAGAGCCATCAATCGACGAAAATGAATCGATTAAGCTACTGATTCAGTTCGAGAATCGCCTCGCTCAGGGGTTCAATCGCGAGCTGCAGGATCTCATGCTAAAATCAAAGGTGTTTTCGCTGCTCGAATTGATTGTTTGTAACCCTAACTACTCGAAAACGATCCGGGAGCATTCGGCGTACGCGATTGGGGCTATGGTCCGTTTCAACAAAGACGTATTCGTTGGTCAAGTACTAATAGGACCGACGATTCACGCCCTAGTTCAAGTGGCTTCCTCTCACTCATTAAAAGTTCTCTGTTCCTTAATCAGATTAGTTAGGTCTCCGCTGGTCGAGGAGATCCAGTCAAACGGCGATATACCAAAAATAATAAGCTCATTGAATTGCCGAGACCTGCAAATTAGGGTTTTAGCTATGGATTGCATCGTTGAAATCGGCTATTTCGGCCGCAAAGAGGCTGTAGATACTATGCTGGAAGAGGGCTTGATAGAAAGGCTTTTAGAGCTACAGAGGTCGGAATTGGGCGGCGATTTGATCGGACTGGGGAAACAAACTGCGGAAGAGAGTAGAGGGGTTGTCGCCGGCGGGGTCGAGGGAAGAGAAAGCAGAGAGAAGAGGTTCTTGGAGAGCCATCCATTTGCGAGCTGTGTGGCCAAGTTTGCAGTGCAATTGGAGGTTGGAGAGGGCTTGAGGAAGAGGGAGAAGAGAGCCATTAAGCCTGAAATTTTGAAGAGAGTTCGAAAAGCTTGCGTCTCTGATGCCGAAGCTGCCACTATAATTGCTGAGGTTCTGTGGGGTTCTAGTCCTTGA

Protein sequence

MDDSSNKDDSPRVLRVLEALKQASHELQANPSPRSEEFNSPTIKALLELEVESEKILSSDPNLSILSQHLANLKTLVETLQKSRGYSLRSFLTRRFATNSVSQVAGSIESEIQAWIDRESLETLVRALKEPSIDENESIKLLIQFENRLAQGFNRELQDLMLKSKVFSLLELIVCNPNYSKTIREHSAYAIGAMVRFNKDVFVGQVLIGPTIHALVQVASSHSLKVLCSLIRLVRSPLVEEIQSNGDIPKIISSLNCRDLQIRVLAMDCIVEIGYFGRKEAVDTMLEEGLIERLLELQRSELGGDLIGLGKQTAEESRGVVAGGVEGRESREKRFLESHPFASCVAKFAVQLEVGEGLRKREKRAIKPEILKRVRKACVSDAEAATIIAEVLWGSSP

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh11G005150 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G005150 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 5..302 e-value: 1.3E-12 score: 49.4
None	No IPR available	PANTHER	PTHR35834:SF2	ARMADILLO-TYPE FOLD PROTEIN-RELATED	coord: 5..397
None	No IPR available	PANTHER	PTHR35834	ARMADILLO-TYPE FOLD PROTEIN-RELATED	coord: 5..397
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 89..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G005150.1	CmaCh11G005150.1	mRNA