CmaCh11G004240 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G004240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	N-acetyltransferase domain-containing protein
Location	Cma_Chr11: 2089742 .. 2093746 (+)
RNA-Seq Expression	CmaCh11G004240
Synteny	CmaCh11G004240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTCCTCTCATCTCTTCCTCTCTGCGCTTGGCGCCATCATCGGCCTTCTTCTTCATCATCCTCATCTTATTTCCCTACAACCCAACTACCCGTTCCTGCAACCTGTTTTCCTTGTCGTCCACCCATTAGAGTCTCAAACGTTTTCACCCACCAACGGACGATCACAGTTGACAAATCTAAGTTGAGGGTCTCTGAAGCCACCTCCAAGGATGAGCTTTGGGCTGCTGCTTGTCTCCGCGTTCGCACCTTTAATCAGTTCCGCCCCGATTCCTATGACATCGACGTGAGTCATTGAATTCAATTGAAATCTTTTGGAAGTTCCGCGTGAGTTCTGGGTCTAAGATTTGAATGTATGAAAATTTGATAGCAATTTTCTTTTTAATGTTTTGATTTATCGGGAGTCAATTTATTCAAGTGTTTGAGAGCTGGAGACCAAATTATCAATTTGGTATTTTATCTTAGAGTATCATTATCGATAACTTGAGAACATCATTGAGTGCACATTTGCATACTTTCATCGGTTGTGGATACAAATATGTTGTGGTATTGATAATGGACTCGATGGAGAGAACACTCGTGGATTCTTGAGATAGGAAGGAATTGTAGATAAGAAAAACGATAGAGATGGATAAATGAAACGTGAGGCTGGCCTGTCTTAGCTGCCATTTCAAATCCCTCGTGATTAAGACTTCACTTTTCACGTAGTATTTCTTGCTCTCCGTTTGCTGTACTGATGCTGTTACTTCTTTTTTTTTTTTTTTTGTCAAGTTCTATTAGGATCATAAGAGGTACTTGGCAGAGAACGAATATGAAGCAATTCAAGAACGTATTGCTGGAAAAAGGGTTAGCTTTAAAAGAGTGTCTTGCATAAATGCTACTCTTCCATTAGCCGAAATATCAACCCTAGCCGATGATTTATGTTCAACATGTAAGGTCCGTGTATTTCTTCATCGTTCCCATATGAATAGTATGTATGTACTCCATCCCTGGATCACTTTAGGAATTTCAAACTTTGAAGTTGCGATCAGTTCTGTGGGTTATGTAAATTCTTACGTTTTTATATACGGAAAATGGTGTTGAGAAGTATGAGATAATGAAAAATGAAGAGGTTGATTGAAGGAATAGCCTTCATTTCAGAAAATTAAAGACATTATTTCTTTTCTTCGTTTACAATGAAAAAGAGAAAGCTATCTGATATTGCAGGACAATCAAGACACGTGTATTAATCATGCAGCCTCGCCTCGCATGAGGTGAATTGCCTCTGTGGTGCTAGACATGTTTAGATAGTGAATGCGTTGGAAGCAATGTTGTTTGATAATGTATGCATACCAAAGTTATGAAAAAAAAAATCTTATACCTGAAAAAGAGATGTGGGCTCCCAAGAGGCATAATCAGAGGTGGGAAAGGAATTACGCAGATTGAAAGAAAAAAAGTATATTGGCTATTTTTTCCTCTTTATGTAAATGCAGGATCTTCTAATTCAAAAAAGTTAGAATGTTATTTGTAATGCTCTGGCAATGTTTTATCCTTTCCTGCTGCTGTTGATTTTTAGTCGATTGAAGAAGATTATGCAACATTTTATGTCTTAGTTTAGACTATATCAGTTCTACAAGTTCTACTTTGTTCCGATCTCGAATCTTTTATTTATTTATTTTATTATCATTTTCTCTTAGTTTTCTGATGATGGAGAGGACCGAGTTGTTGTTGGGTCACTCGACCTTAATCAGTGTATAAGGCTTCCAGATGAAATAGCGGGAATGAAACCTGAGGTAAATGATCGATTTCTTTAATTCTTTAGTTTCTTAAATTATGTTTTTCACTCTTTTGAATAATTGGTCATGAACATGTCTCATTATTATCTATGAAAATCAGAGTCACCTTCTTGGCCCAATTTCTTTTTAACGTGAAAAATGTGGATTCAAAATATTGACTATTATTTATTATCCAAAAACTGGAATTTTTTAGCTCTTGATTGTTTTTTTATCAGAATTTGGTAGCTTCATGTGTTTCCCATTATTCAGATCATTGGACAGTATGTGTTTTTTTATTGTTATTGAAAAACCAGGTTGGTTAGTTTGAACGTGTAATATAGGGGAGAGCTTCATATGTGTGAATAGCAGAGTAGGACTTGAAGTTGAACAAAGCCTTCGCAGAATATTCTTCTGTAAGCTATAGCAGCTAACACTCAAAAGACTTTATCACCTTCAATTTCGTCCAATCCTTGATCTTATAATCTGGCTGCACTAACATCAAGCATTGTCAGTTTCACTCAATTCAGAATGACGAGAGGTTATTGGATGACAATTTCTTATTGAGGCATGATCAGGCATGATAAGAGTGTTCGCCTAGAAAGTTGAATAGGTGGTGAAATTTTGGTTGAATTGGAGAATGACAACAGTACATTAGCCAAGAATACTCACTCTGGAACTGTTAGGATTGATTACTTGTCTCCTGTATTTAGTTGTTAAAATTACTGAGGCTGTGTAGTCTGAGGTTGGTATGCAGAATTACTGAGATCTGGGTAACACTCGAAAGGCCTCTTGCCATGCAGTGTAACGCGAAGGTTAAGCAATGCAAGTGCTCCTTCAAATCAGAATAAAGGATATCTCTCCGTTTAGAAATATCTTTATAAGATGAAGAGCTATCTGATTTGCTAGCCTTTTCGGTCACATCATGGATGAAAAGATAACTTTGTAAAGAGTGTCTTTAACTGATTTTGAACCCAAATATTAATTTCTGTCATGAGAATTATCACCTCAATAATCAAATTTTGAACCATACAAAAGGCTAGTAGCTTCCTCCTCAGTTTATTTTCAACTTGAATTCCAACTCTACTATCTCCACATATGATTCATTGATTGCTTTCTCCATTTTGATAGAACTATCGCCTGGAGTCGGCCAGATTGTCCATAAATTTCTGATGTTGCGTCTTCCAGTCTCTATTTCATTCTAATAGCTAACTAACAGGGATTCGATTTATTATTTTTGGTTTGATTGTGCTTGGTTTCTTCCATTCCTTTTGTAGTCCTTCATTCATTTGAGAGTTGTTTCTTACCCTTTCTTTCAAAGAAAACACATACGGGCGGGCACACTTTGCAGTTGCACATCCTTCCACATCATCTATTGTTTCCTGTAATCTTCAATGACTAGTGAGGTTTCTCTCCAATTAAGTACACCCTTGTTTTGACATTTCACTGGCAATGTTCCTGACACACTCTAGAATTCATAAATCGTTTCCAAATTCATTCATGAACTCTATGTTTCAATTTATCTGAACCTTGTATTGACATAGATATGATTCTAGGTCGTGAGTTGATTTTGCATGATAAAGGATTTCTTAAATATTTTTCCAACAGGGAATTGGGGCCGATTTCGCAAGGGCATACCTGAGCAATGTATGTGTTGCCAAGGAAGTGCACAGAAATGGGTTGGGTTTTGCACTTGTTGCAAAGGCAAAGACAATTGCGGAAGATTGGGGTAACCATTTTGTGACACAATTTCATTCATGTTAAATATGGTCATGATCTTTATGAATTATCAGCATCTCCGTCTTTATGGCTTCTGCTTTAGAATGTGGTCTTAGCGTTTATGGTGACACTTCTCCATGAAAAACTGCCATTTGTGATACAATGTTGTAATGTTTTAGGCATCAGTGATCTATACGTCCACGTAGCTTTCGACAACGAACCCGCAAAGAACCTCTACTTGAAGAGTGGTTTTGTCCATGAAAGTGACGAACCTGCTTGGCAAGCCAGGTTTCTAGATCGACCACGCAGGATTCTCCTGTGGACTTCTCTCTCAGAACTTCTCTGATATTGCACTGAATAGAGTTTTGCTCATTATTTTACGTGCAATTTTCTCTCTCTACCGGTACACAGATCATTTCTGTTTTTAATTTACTACAATTCTATTCAATGTAAAATTATGTGGATATGTTGTCCCTCTCCATAATTCATAATATAGCATGAAAATATTGAATTGACAAACTCTTTATATTAAT

mRNA sequence

ATGGCGGTCCTCTCATCTCTTCCTCTCTGCGCTTGGCGCCATCATCGGCCTTCTTCTTCATCATCCTCATCTTATTTCCCTACAACCCAACTACCCGTTCCTGCAACCTGTTTTCCTTGTCGTCCACCCATTAGAGTCTCAAACGTTTTCACCCACCAACGGACGATCACAGTTGACAAATCTAAGTTGAGGGTCTCTGAAGCCACCTCCAAGGATGAGCTTTGGGCTGCTGCTTGTCTCCGCGTTCGCACCTTTAATCAGTTCCGCCCCGATTCCTATGACATCGACGATCATAAGAGGTACTTGGCAGAGAACGAATATGAAGCAATTCAAGAACGTATTGCTGGAAAAAGGGTTAGCTTTAAAAGAGTGTCTTGCATAAATGCTACTCTTCCATTAGCCGAAATATCAACCCTAGCCGATGATTTATGTTCAACATGTAAGTTTTCTGATGATGGAGAGGACCGAGTTGTTGTTGGGTCACTCGACCTTAATCAGTGTATAAGGCTTCCAGATGAAATAGCGGGAATGAAACCTGAGGGAATTGGGGCCGATTTCGCAAGGGCATACCTGAGCAATGTATGTGTTGCCAAGGAAGTGCACAGAAATGGGTTGGGTTTTGCACTTGTTGCAAAGGCAAAGACAATTGCGGAAGATTGGGGCATCAGTGATCTATACGTCCACGTAGCTTTCGACAACGAACCCGCAAAGAACCTCTACTTGAAGAGTGGTTTTGTCCATGAAAGTGACGAACCTGCTTGGCAAGCCAGGTTTCTAGATCGACCACGCAGGATTCTCCTGTGGACTTCTCTCTCAGAACTTCTCTGATATTGCACTGAATAGAGTTTTGCTCATTATTTTACGTGCAATTTTCTCTCTCTACCGGTACACAGATCATTTCTGTTTTTAATTTACTACAATTCTATTCAATGTAAAATTATGTGGATATGTTGTCCCTCTCCATAATTCATAATATAGCATGAAAATATTGAATTGACAAACTCTTTATATTAAT

Coding sequence (CDS)

ATGGCGGTCCTCTCATCTCTTCCTCTCTGCGCTTGGCGCCATCATCGGCCTTCTTCTTCATCATCCTCATCTTATTTCCCTACAACCCAACTACCCGTTCCTGCAACCTGTTTTCCTTGTCGTCCACCCATTAGAGTCTCAAACGTTTTCACCCACCAACGGACGATCACAGTTGACAAATCTAAGTTGAGGGTCTCTGAAGCCACCTCCAAGGATGAGCTTTGGGCTGCTGCTTGTCTCCGCGTTCGCACCTTTAATCAGTTCCGCCCCGATTCCTATGACATCGACGATCATAAGAGGTACTTGGCAGAGAACGAATATGAAGCAATTCAAGAACGTATTGCTGGAAAAAGGGTTAGCTTTAAAAGAGTGTCTTGCATAAATGCTACTCTTCCATTAGCCGAAATATCAACCCTAGCCGATGATTTATGTTCAACATGTAAGTTTTCTGATGATGGAGAGGACCGAGTTGTTGTTGGGTCACTCGACCTTAATCAGTGTATAAGGCTTCCAGATGAAATAGCGGGAATGAAACCTGAGGGAATTGGGGCCGATTTCGCAAGGGCATACCTGAGCAATGTATGTGTTGCCAAGGAAGTGCACAGAAATGGGTTGGGTTTTGCACTTGTTGCAAAGGCAAAGACAATTGCGGAAGATTGGGGCATCAGTGATCTATACGTCCACGTAGCTTTCGACAACGAACCCGCAAAGAACCTCTACTTGAAGAGTGGTTTTGTCCATGAAAGTGACGAACCTGCTTGGCAAGCCAGGTTTCTAGATCGACCACGCAGGATTCTCCTGTGGACTTCTCTCTCAGAACTTCTCTGA

Protein sequence

MAVLSSLPLCAWRHHRPSSSSSSSYFPTTQLPVPATCFPCRPPIRVSNVFTHQRTITVDKSKLRVSEATSKDELWAAACLRVRTFNQFRPDSYDIDDHKRYLAENEYEAIQERIAGKRVSFKRVSCINATLPLAEISTLADDLCSTCKFSDDGEDRVVVGSLDLNQCIRLPDEIAGMKPEGIGADFARAYLSNVCVAKEVHRNGLGFALVAKAKTIAEDWGISDLYVHVAFDNEPAKNLYLKSGFVHESDEPAWQARFLDRPRRILLWTSLSELL

Homology

[Close]

BLAST of CmaCh11G004240 vs. TAIR 10
Match: AT4G28030.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein )

HSP 1 Score: 318.9 bits (816), Expect = 3.9e-87
Identity = 155/254 (61.02%), Postives = 195/254 (76.77%), Query Frame = 0


Query: 18  SSSSSSSYFPTTQLPVPATCFPCRPPIRVSNVFTHQRTITVDKSKLRVSEATSKDELWAA 77
           +  SS SY     L +P+     RP    S++        +DKS   +SE+ S+DELWAA
Sbjct: 22  TDGSSRSY-----LSIPSLKLRFRPVAASSHICAP----AIDKSTFVISESVSEDELWAA 81

Query: 78  ACLRVRTFNQFRPDSYDIDDHKRYLAENEYEAIQERIAGKRVSFKRVSCINATLPLAEIS 137
           ACLRVRTFN+  P +Y+I DH+RYLAE E+EA++ER +GKR  F RV+CINATLPL+++S
Sbjct: 82  ACLRVRTFNELNPSAYNIQDHRRYLAEREFEALKERTSGKREGFTRVACINATLPLSQLS 141

Query: 138 TLADDLCSTCKFSDDGEDRVVVGSLDLNQCIRLPDEIAGMKPEGIGADFARAYLSNVCVA 197
           +  +DLCS CKFSD  EDRVVVGSLDLNQC  LPDEIAG KPEGIG DFARAYLSNVCVA
Sbjct: 142 SSFEDLCSACKFSDGIEDRVVVGSLDLNQCRWLPDEIAGTKPEGIGVDFARAYLSNVCVA 201

Query: 198 KEVHRNGLGFALVAKAKTIAEDWGISDLYVHVAFDNEPAKNLYLKSGFVHESDEPAWQAR 257
           KE+HRNG+G+ L+ K+K +A +WGI+D+YVHV  DNE AK+LY+KSGF  E+ EPAWQAR
Sbjct: 202 KELHRNGVGYKLIDKSKRVAGEWGITDMYVHVTVDNEAAKSLYMKSGFEQETAEPAWQAR 261

Query: 258 FLDRPRRILLWTSL 272
           +L+RP+R+LLW +L
Sbjct: 262 YLNRPQRLLLWLAL 266

[Close]

BLAST of CmaCh11G004240 vs. TAIR 10
Match: AT4G28030.2 (Acyl-CoA N-acyltransferases (NAT) superfamily protein )

HSP 1 Score: 294.7 bits (753), Expect = 7.9e-80
Identity = 148/254 (58.27%), Postives = 186/254 (73.23%), Query Frame = 0


Query: 18  SSSSSSSYFPTTQLPVPATCFPCRPPIRVSNVFTHQRTITVDKSKLRVSEATSKDELWAA 77
           +  SS SY     L +P+     RP    S++        +DKS   +SE+ S+DELWAA
Sbjct: 22  TDGSSRSY-----LSIPSLKLRFRPVAASSHICAP----AIDKSTFVISESVSEDELWAA 81

Query: 78  ACLRVRTFNQFRPDSYDIDDHKRYLAENEYEAIQERIAGKRVSFKRVSCINATLPLAEIS 137
           ACLRVRTFN+  P +Y+I DH+RYLAE E+EA++ER +GKR  F RV+CINATLPL+++S
Sbjct: 82  ACLRVRTFNELNPSAYNIQDHRRYLAEREFEALKERTSGKREGFTRVACINATLPLSQLS 141

Query: 138 TLADDLCSTCKFSDDGEDRVVVGSLDLNQCIRLPDEIAGMKPEGIGADFARAYLSNVCVA 197
           +  +DLCS CKFSD  EDRVVVGSLDLNQC  LPDEIAG KPEGIG DFARAYLSNVCVA
Sbjct: 142 SSFEDLCSACKFSDGIEDRVVVGSLDLNQCRWLPDEIAGTKPEGIGVDFARAYLSNVCVA 201

Query: 198 KEVHRNGLGFALVAKAKTIAEDWGISDLYVHVAFDNEPAKNLYLKSGFVHESDEPAWQAR 257
           KE+HRNG+G+ L+ K+K +A +W           DNE AK+LY+KSGF  E+ EPAWQAR
Sbjct: 202 KELHRNGVGYKLIDKSKRVAGEW-----------DNEAAKSLYMKSGFEQETAEPAWQAR 255

Query: 258 FLDRPRRILLWTSL 272
           +L+RP+R+LLW +L
Sbjct: 262 YLNRPQRLLLWLAL 255

[Close]

BLAST of CmaCh11G004240 vs. TAIR 10
Match: AT2G06025.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 7.1e-12
Identity = 71/258 (27.52%), Postives = 109/258 (42.25%), Query Frame = 0


Query: 6   SLPLCAWRHHRPSSSSSSSYFPTTQLPVPATCFPCRPP-IRVSNV------FTHQRTITV 65
           ++PL     +  SS +S     + Q+ +P      RP  +R   +      F H+     
Sbjct: 29  TIPLWKLTINSRSSDTSKKEELSVQISIPPQVDQSRPEGLRFDRLQPPEPEFGHEDRFEF 88

Query: 66  DKSKLRVSEATSKDELWAAACLRVRTFNQFRPDSYDIDDHKRYLAENEYEAIQERIAGKR 125
            K   R  EA   +E W AA LR  +  + R +   +D++KR  AE E+ AI+ R  G  
Sbjct: 89  GKFVAR--EAMLDEEYWTAAWLRAESHWEDRSNERYVDNYKRKFAEQEFNAIKRRCKG-- 148

Query: 126 VSFKRVSCINATLPLAEISTLADDLCSTCKFSDDGEDRVVVGSLDLN-----QCIRLPDE 185
           +  ++ SCI A             +    K       + VVG+LDL+     Q    P E
Sbjct: 149 MQGQKCSCIVA-------------VKKEEKHIKRSVIKSVVGTLDLSIRYFLQGETFPGE 208

Query: 186 ------IAGMKPEGIGADFARAYLSNVCVAKEVHRNGLGFALVAKAKTIAEDWGISDLYV 245
                    +  EG        Y++N+CVAK   R G+   ++  A   A   G+  +YV
Sbjct: 209 KVKSQLFCSINQEGSN---RYGYIANLCVAKSARRQGIACNMLRFAVESARLSGVEQVYV 266

[Close]

BLAST of CmaCh11G004240 vs. TAIR 10
Match: AT2G39000.3 (Acyl-CoA N-acyltransferases (NAT) superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 6.4e-05
Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0


Query: 189 AYLSNVCVAKEVHRNGLGFALVAKAKTIAEDWGISDLYVHVAFDNEPAKNLYLKSGF 246
           AY+SNV V +   R G+   L+ KA+ +A++WG   + +H   +N  A  LY   GF
Sbjct: 138 AYVSNVAVRENFRRKGIAKRLIWKAEALAKNWGCRAIGLHCDLNNLGATKLYKDQGF 194

[Close]

BLAST of CmaCh11G004240 vs. TAIR 10
Match: AT2G39000.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 6.4e-05
Identity = 21/57 (36.84%), Postives = 32/57 (56.14%), Query Frame = 0


Query: 189 AYLSNVCVAKEVHRNGLGFALVAKAKTIAEDWGISDLYVHVAFDNEPAKNLYLKSGF 246
           AY+SNV V +   R G+   L+ KA+ +A++WG   + +H   +N  A  LY   GF
Sbjct: 194 AYVSNVAVRENFRRKGIAKRLIWKAEALAKNWGCRAIGLHCDLNNLGATKLYKDQGF 250

The following BLAST results are available for this feature:

BLAST of CmaCh11G004240 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G004240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28030.1	3.9e-87	61.02	Acyl-CoA N-acyltransferases (NAT) superfamily protein	[more]
AT4G28030.2	7.9e-80	58.27	Acyl-CoA N-acyltransferases (NAT) superfamily protein	[more]
AT2G06025.1	7.1e-12	27.52	Acyl-CoA N-acyltransferases (NAT) superfamily protein	[more]
AT2G39000.3	6.4e-05	36.84	Acyl-CoA N-acyltransferases (NAT) superfamily protein	[more]
AT2G39000.1	6.4e-05	36.84	Acyl-CoA N-acyltransferases (NAT) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000182	GNAT domain	PFAM	PF00583	Acetyltransf_1	coord: 180..245 e-value: 3.4E-9 score: 36.9
IPR000182	GNAT domain	PROSITE	PS51186	GNAT	coord: 80..264 score: 11.353971
None	No IPR available	GENE3D	3.40.630.30		coord: 66..250 e-value: 4.1E-15 score: 58.1
None	No IPR available	PANTHER	PTHR47876	OS08G0260000 PROTEIN	coord: 15..272
None	No IPR available	CDD	cd04301	NAT_SF	coord: 172..228 e-value: 1.37099E-5 score: 39.9517
IPR016181	Acyl-CoA N-acyltransferase	SUPERFAMILY	55729	Acyl-CoA N-acyltransferases (Nat)	coord: 158..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G004240.1	CmaCh11G004240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0008080	N-acetyltransferase activity