CmaCh11G004100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G004100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box protein PP2-B10-like
Location	Cma_Chr11: 2004550 .. 2008687 (+)
RNA-Seq Expression	CmaCh11G004100
Synteny	CmaCh11G004100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAGGATGAAACGAGGACGGGAACGGAGGACGGAGAAATTGCGGATTTCTCTTCTCTGCCAGAAGGAGCAATTGCTAACATCTTGTCTCTGACGACTCCATCCGATGCCTGCAGGTCATCGGCGGTTTCCCGTATTTTCCATGCGGCGGCGCAGTCCGATATCGTGTGGGAGAGATTCCTGCCTACCAATTGGGAAGATTTGATTTCTCGGCGTAAACCTAATGACCTGAATTTTGATCCGACTACATGGTCGACGAAGGAGATCTTTTTCTCCCTTTGCAACAATCCACTGCTAATTGACGATGGCTACACGGTACGCTTTTTGATTCCCCCAATTTCTCTAAATTAATGGTGGCCGGAGTTGCGTGAGTTGTCGGCGGAGACAAGTGTTACTCTAGCCTCGCCGTCGTGCTCGGTTTTTATAGACACGCTCGATTTTTAACATAAACTTTCGAAGTTATTTCGATTCCTACAAAAACTTTTGTGATAATCCTTGAAAAGGTTTACTCAAAATCCAGAAAACATGAACTGTGATATGAAAAAGTTTTGTTTGGGAGAATTAAGCTTCCGCCGACTCCAATTTTAGGTCCAGATTTGATTCTCAAAGAACAGAATGACATTATGATCATGTGCCCATCTTTTGGCACATTGAATTAACGAAGCTTCTGTTCAGTTGTTCTTTGTATGCACATAATTTGAGTGGGTACAATCATTGGTATGTAGCAGAGCATCTCTTTGGACAAACGGAGTGGTAAGAAATACGTAATGCTTGGAGCAAGGGAGCTATCAATTGTTTGGGGCGATACCTCTGTCTATTGGGCCTGGGAATCTCATCCTGAGTCAAGGTTTTAAGCTTAAACGATTGGCTCAAATCCCACTTTTTATCTTGATCCCAATTCTGATACTTTGCCTTTTAATGTGGGTGTGAGAATCAGGTTCACAGAAGTACTTGTCATCTTCAAGGCGTGGTGGCTTGAAATCCGTGGAAAGATAAGCAGTAGAATGTTGTCTCCTGCAACAACATATGTAGCTTACTTTGTGTTCAGGACGAGGGAACGTAGATACTTTGGGTTCAATATAGATCCAGTCGATGCCATGGTGGGCATTGTTGGTAGTGAACACTATATGAAGAGCGTTTGTTTGGACCCTTATTTCGACCATCCTCATCAGCGAGGCCGACGCGTACCACGAGCAGGGTGCAATGTATCAAGGTTGGAGCAGCCGAGGGAGAGACATGACGGTTGGTTTGAAACTGAGTTAGGAGAGTTTCGTATTGATGGTGGAGATGAAGAAGTAGAGATCATTCTTAAGAAGGTTAAGTGTATTGATTCCAGGAGTGGCCTCGTTGTTCAGGGTATAGATATTAGGCCCAAAATGAACCCTGCATAGATTGTTACAACTTCAAGAAACTAGATGCCTAGTTTCAAATTTCAATCAATTTCAACGTTTATACACCTTGTAGTTTAGGGTAAAGATCGAATTTTTTTCCTCAAAAAAAATTTCAGTGAAATGAATTGTTCTAAATACACAGCAATGGGAACTTTTCTTTTCCTCTTTCTTTGGCTTAACAAGATAAAAGATAGAGAGCTGGCCGACTGACTTTATACTTCAAGAGTACATGGGTGTGATTCAAGGGAGTTTGGAAGGGAAGGTGTCGGATGAGGTTGCTACACTTGAGAGAGAGGATTGCTAACTTACAGAGAGTGGCAGCTGCCTCGTCGAGAATATGATTGCCTCGCCCACTTTGCCACCAGGAATTGAGGGGTTCAGCATGACAAGAATGCTAGCTGCTTAACATTGTAAGACATAGAACGTCTTGCTTTGCCTCAAAAACAAAGAAATCAGGGTTGCCTCAAAATTTCCTCCCCTTTTTACAAATATGAAGAAAGAAAGAAATCATGATAGAAGTTTAGACCGCTCATACTAGTTCAAGAAAGTAGATCTTATAAGGTAATCTGCAACCTAAAGAATCACAATTTTTTTTTCCTCTACTTCTCTTAAGGAGGGGTGCTTTAGCATTTACTAATAACTTCGAAAGTCGTTAGCTCCTCTCTAAATTAACCCTAGGGTACTTTGAGTGCTCTACTTGTAAATAAAAAGGGGATGGACCTTTTCTTACTTGCTTTTATCTCTTCACTAGTGATCGGCTTTCCTACTAGGATGCCTCAAATTTGATGACATATTAAGGGAAGCCCCGGATAGAGACAATTTTTAATTTGTTCAAATATATATATAATTAATGGTTGGATGTTGGCGTAGGTTGGAAGGAGAATAGATATATTATCCATTTGTCCCCGAACGTAAAATTCATTACTCATTCAGACGGCTAAGAAAGATGGAAGAAGAAGAGAGCGAAGGAATTATTTATTTATCTTCGATGCCAGAAGGAGTCGTGGCTAACATCTTGTCGCTGACGACTCCATCGGATGCCTGCAGATCGTCGGCGGTTTCGGGGACTTTCCATGCGGCGGCGCAGTCGGACATCTTATGGAACAACTTCCTGCCCATCGATTGGGAATCTTTGGTTTCTCGGAGGAAAACCAGTGACCTGAATTTTGATCCAATTTCCAGTTCGAAAAAGGAGATCTTTTTCTCCCTCTGCGACTGCCCACTGCTGATTGATGACGGCAACAAGGTAACCTTTCTGATTCCCCTAATTTTTCTAATTTGCTATCCATCTCCTACTCCTCCGCCTGTGCCCATCGTCGGATCAGAAGTTCTTTTCCTCTGAGGCGTTCTTTTCGAATACCTTCGCCAAAAAAATTATTTTCAAAGTTCGTTATTCATTGGTGAAAAGTTGAAGCTTATAAATTTGGTTCTTTCCTGCTTAATCTGATCAAAGTTAATAAGATGCTTGTTTAATCAAATAAAAAGGGCCTCTGTTGTTAGGATCCCACATATATACTGTTTCTGCATGTACAAATATGAATCCGTAGAGAAGTATGATCTGGGATTTATACATACTATGCTTGAGCTACTGGGTTATTTTAACGTTTAAATTTCAACAAAAGCTGTCGAAATTATCAAATTTCTTGTATTCTAGTCAATCTGTGAAGGTTTTGGTATCTTCCCTTGGTAAAGTTTCAAGGTACGGATTATTTGATTGTATAAATTGGTTCATAAGTTCATAAGTACATCTTTTTAAGCTGAGTGGGTTCAATGGATGGCGTTTGGCAGAGCTTTTCATTGGACAAATGGAGTGGTAAAAAATGCATAATGCTTGGAGCAAGGGACCTGAAGATTATTTGGACCGACACCCCTGACTATTGGACTTGGATATCACATCCTGAGTCGAGGTTTAACTCTCAAATCCCCTTAACTTGTTTCTTTTCCTTCTGCTTCTAATATTTACTTTGTCCTTTTAATGTGGGTGTGAGAATCAGGTTCGGGGAGGTGGCTGTTCTCCTCCAGGCGTGGTGGGTTGAGTTACGTGGAAAGATAAGCTGCAAAATGTTGTCCGCTGCAACAACTTATGCAGCTTACTTCGTGTTTAAAATGAATGAACGATATTATGGGTTCGATATAGTTCCTGCTGATGCCAAGGTGGGAATCGTTGGCGGTGAATGCTGCACCATTAGTGTGGGTTTGGACCCTTATTTAGACAACTCTCAACGGAAGCGCCAACGTTTAGTATGGATGGGAAGCAATACGCCTGGACATCGCCAACGCTTACGATGGATGGGAAGCAAAACCCATGCGCCTGGAATTAACATGTCAGGGATGGCGCTGCCAAAGGAGAGACATGACGGTTGGTTTGAAATCGAGATGGGAGAGTTCCATAATAATGGTGGAGATGATGAAGTTGAGATGGTTCTGAAGGAGGTTAATTGCAATTATTCCAAGTGTGGCCTCATCGTTCAAGGGATAGAGATTAGGCCTAAAAAGTCAGTTCTGCATAGATGATAGATCACAGATGGAGTGTTGTGAACTTCGGTAATGCAATAAACATGGGACCACCGAAAACTTTGCGTTGTATATGGACATAGGACAGGCAAGTAAACAGCTATTACATTTCAACCTAAATGTTACTATTTTCATTTCTCACCTTGAAAGTCAAGATTTGAAAAATTGATAATACCCTGTTCTCACTGTTCTTTTGAGATGACAACCAATAAGAAAAGTTTCAAGCTAAG

mRNA sequence

ATGGACGAGGATGAAACGAGGACGGGAACGGAGGACGGAGAAATTGCGGATTTCTCTTCTCTGCCAGAAGGAGCAATTGCTAACATCTTGTCTCTGACGACTCCATCCGATGCCTGCAGGTCATCGGCGGTTTCCCGTATTTTCCATGCGGCGGCGCAGTCCGATATCGTGTGGGAGAGATTCCTGCCTACCAATTGGGAAGATTTGATTTCTCGGCGTAAACCTAATGACCTGAATTTTGATCCGACTACATGGTCGACGAAGGAGATCTTTTTCTCCCTTTGCAACAATCCACTGCTAATTGACGATGGCTACACGAGCATCTCTTTGGACAAACGGAGTGGTAAGAAATACGTAATGCTTGGAGCAAGGGAGCTATCAATTGTTTGGGGCGATACCTCTGTCTATTGGGCCTGGGAATCTCATCCTGAGTCAAGGTTCACAGAAGTACTTGTCATCTTCAAGGCGTGGTGGCTTGAAATCCGTGGAAAGATAAGCAGTAGAATGTTGTCTCCTGCAACAACATATGTAGCTTACTTTGTGTTCAGGACGAGGGAACGTAGATACTTTGGGTTCAATATAGATCCAGTCGATGCCATGGTGGGCATTGTTGGTAGTGAACACTATATGAAGAGCGTTTGTTTGGACCCTTATTTCGACCATCCTCATCAGCGAGGCCGACGCGTACCACGAGCAGGGTGCAATGTATCAAGGTTGGAGCAGCCGAGGGAGAGACATGACGGTTGGTTTGAAACTGAGTTAGGAGAGTTTCGTATTGATGGTGGAGATGAAGAAGTAGAGATCATTCTTAAGAAGGTTAAGTGTATTGATTCCAGGAGTGGCCTCGTTGTTCAGGAAGGAGTCGTGGCTAACATCTTGTCGCTGACGACTCCATCGGATGCCTGCAGATCGTCGGCGGTTTCGGGGACTTTCCATGCGGCGGCGCAGTCGGACATCTTATGGAACAACTTCCTGCCCATCGATTGGGAATCTTTGGTTTCTCGGAGGAAAACCAGTGACCTGAATTTTGATCCAATTTCCAGTTCGAAAAAGGAGATCTTTTTCTCCCTCTGCGACTGCCCACTGCTGATTGATGACGGCAACAAGAGCTTTTCATTGGACAAATGGAGTGGTAAAAAATGCATAATGCTTGGAGCAAGGGACCTGAAGATTATTTGGACCGACACCCCTGACTATTGGACTTGGATATCACATCCTGAGTCGAGGTTCGGGGAGGTGGCTGTTCTCCTCCAGGCGTGGTGGGTTGAGTTACGTGGAAAGATAAGCTGCAAAATGTTGTCCGCTGCAACAACTTATGCAGCTTACTTCGTGTTTAAAATGAATGAACGATATTATGGGTTCGATATAGTTCCTGCTGATGCCAAGGTGGGAATCGTTGGCGGTGAATGCTGCACCATTAGTGTGGGTTTGGACCCTTATTTAGACAACTCTCAACGGAAGCGCCAACGTTTAGTATGGATGGGAAGCAATACGCCTGGACATCGCCAACGCTTACGATGGATGGGAAGCAAAACCCATGCGCCTGGAATTAACATGTCAGGGATGGCGCTGCCAAAGGAGAGACATGACGGTTGGTTTGAAATCGAGATGGGAGAGTTCCATAATAATGGTGGAGATGATGAAGTTGAGATGGTTCTGAAGGAGGTTAATTGCAATTATTCCAAGTGTGGCCTCATCGTTCAAGGGATAGAGATTAGGCCTAAAAAGTCAGTTCTGCATAGATGATAGATCACAGATGGAGTGTTGTGAACTTCGGTAATGCAATAAACATGGGACCACCGAAAACTTTGCGTTGTATATGGACATAGGACAGGCAAGTAAACAGCTATTACATTTCAACCTAAATGTTACTATTTTCATTTCTCACCTTGAAAGTCAAGATTTGAAAAATTGATAATACCCTGTTCTCACTGTTCTTTTGAGATGACAACCAATAAGAAAAGTTTCAAGCTAAG

Coding sequence (CDS)

ATGGACGAGGATGAAACGAGGACGGGAACGGAGGACGGAGAAATTGCGGATTTCTCTTCTCTGCCAGAAGGAGCAATTGCTAACATCTTGTCTCTGACGACTCCATCCGATGCCTGCAGGTCATCGGCGGTTTCCCGTATTTTCCATGCGGCGGCGCAGTCCGATATCGTGTGGGAGAGATTCCTGCCTACCAATTGGGAAGATTTGATTTCTCGGCGTAAACCTAATGACCTGAATTTTGATCCGACTACATGGTCGACGAAGGAGATCTTTTTCTCCCTTTGCAACAATCCACTGCTAATTGACGATGGCTACACGAGCATCTCTTTGGACAAACGGAGTGGTAAGAAATACGTAATGCTTGGAGCAAGGGAGCTATCAATTGTTTGGGGCGATACCTCTGTCTATTGGGCCTGGGAATCTCATCCTGAGTCAAGGTTCACAGAAGTACTTGTCATCTTCAAGGCGTGGTGGCTTGAAATCCGTGGAAAGATAAGCAGTAGAATGTTGTCTCCTGCAACAACATATGTAGCTTACTTTGTGTTCAGGACGAGGGAACGTAGATACTTTGGGTTCAATATAGATCCAGTCGATGCCATGGTGGGCATTGTTGGTAGTGAACACTATATGAAGAGCGTTTGTTTGGACCCTTATTTCGACCATCCTCATCAGCGAGGCCGACGCGTACCACGAGCAGGGTGCAATGTATCAAGGTTGGAGCAGCCGAGGGAGAGACATGACGGTTGGTTTGAAACTGAGTTAGGAGAGTTTCGTATTGATGGTGGAGATGAAGAAGTAGAGATCATTCTTAAGAAGGTTAAGTGTATTGATTCCAGGAGTGGCCTCGTTGTTCAGGAAGGAGTCGTGGCTAACATCTTGTCGCTGACGACTCCATCGGATGCCTGCAGATCGTCGGCGGTTTCGGGGACTTTCCATGCGGCGGCGCAGTCGGACATCTTATGGAACAACTTCCTGCCCATCGATTGGGAATCTTTGGTTTCTCGGAGGAAAACCAGTGACCTGAATTTTGATCCAATTTCCAGTTCGAAAAAGGAGATCTTTTTCTCCCTCTGCGACTGCCCACTGCTGATTGATGACGGCAACAAGAGCTTTTCATTGGACAAATGGAGTGGTAAAAAATGCATAATGCTTGGAGCAAGGGACCTGAAGATTATTTGGACCGACACCCCTGACTATTGGACTTGGATATCACATCCTGAGTCGAGGTTCGGGGAGGTGGCTGTTCTCCTCCAGGCGTGGTGGGTTGAGTTACGTGGAAAGATAAGCTGCAAAATGTTGTCCGCTGCAACAACTTATGCAGCTTACTTCGTGTTTAAAATGAATGAACGATATTATGGGTTCGATATAGTTCCTGCTGATGCCAAGGTGGGAATCGTTGGCGGTGAATGCTGCACCATTAGTGTGGGTTTGGACCCTTATTTAGACAACTCTCAACGGAAGCGCCAACGTTTAGTATGGATGGGAAGCAATACGCCTGGACATCGCCAACGCTTACGATGGATGGGAAGCAAAACCCATGCGCCTGGAATTAACATGTCAGGGATGGCGCTGCCAAAGGAGAGACATGACGGTTGGTTTGAAATCGAGATGGGAGAGTTCCATAATAATGGTGGAGATGATGAAGTTGAGATGGTTCTGAAGGAGGTTAATTGCAATTATTCCAAGTGTGGCCTCATCGTTCAAGGGATAGAGATTAGGCCTAAAAAGTCAGTTCTGCATAGATGA

Protein sequence

MDEDETRTGTEDGEIADFSSLPEGAIANILSLTTPSDACRSSAVSRIFHAAAQSDIVWERFLPTNWEDLISRRKPNDLNFDPTTWSTKEIFFSLCNNPLLIDDGYTSISLDKRSGKKYVMLGARELSIVWGDTSVYWAWESHPESRFTEVLVIFKAWWLEIRGKISSRMLSPATTYVAYFVFRTRERRYFGFNIDPVDAMVGIVGSEHYMKSVCLDPYFDHPHQRGRRVPRAGCNVSRLEQPRERHDGWFETELGEFRIDGGDEEVEIILKKVKCIDSRSGLVVQEGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDPISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISHPESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAKVGIVGGECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGMALPKERHDGWFEIEMGEFHNNGGDDEVEMVLKEVNCNYSKCGLIVQGIEIRPKKSVLHR

Homology

[Close]

BLAST of CmaCh11G004100 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.1e-58
Identity = 119/295 (40.34%), Postives = 171/295 (57.97%), Query Frame = 0


Query: 283 VVQEGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLN 342
           V+ E  ++NI+S T+P DAC +++VS TF +A  SD +W+ FLP ++ESLVSR +     
Sbjct: 63  VLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR----- 122

Query: 343 FDPISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTW 402
              + +SKKE++F+LC  P+LI+DG KSF L+K SGK+CIML +++L I W  +P+YW W
Sbjct: 123 ---VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQW 182

Query: 403 ISHPESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAK 462
           IS PESRF ++A LL   W E+RGK S ++LS  T Y+AY VFK  +R  G   +P +  
Sbjct: 183 ISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVG 242

Query: 463 VGIVGGECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGM 522
           +G+VG                 Q   +R ++             ++G +          +
Sbjct: 243 LGLVG-----------------QESSKRFIY-------------FIGPRDRRGRRETRDV 302

Query: 523 ALPKERHDGWFEIEMGEFHNNGGDDEVEMVLKEVNCNYSKCGLIVQGIEIRPKKS 578
             P +R DGW E E+GEF N    DE+E  + E+     K GLI+QGIE RP KS
Sbjct: 303 TKPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRPTKS 319

[Close]

BLAST of CmaCh11G004100 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.0e-58
Identity = 124/294 (42.18%), Postives = 165/294 (56.12%), Query Frame = 0


Query: 286 EGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDP 345
           E  ++ I+S T P DAC ++ VS TF +  +SDI+W  FLP D+ESL+   +        
Sbjct: 19  EDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSR-------- 78

Query: 346 ISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISH 405
           + SSKKE++FSLC+ P+L DD  KS  L+K SGK+C+ML A +L IIW D P YW WI  
Sbjct: 79  VFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPI 138

Query: 406 PESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAKVGI 465
           PESRF +VA L    W E+RG+ + ++LS  T Y+AY VFK  ++ YGF  V  +A VG+
Sbjct: 139 PESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGV 198

Query: 466 VGGECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGMALP 525
           VG                 Q   +RL+         R+                  +  P
Sbjct: 199 VG-----------------QEPSRRLICFSEAIRRGRR-----------------NVVKP 258

Query: 526 KERHDGWFEIEMGEFHNNGG---DDEVEMVLKEVNCNYSKCGLIVQGIEIRPKK 577
           K+R DGW EIE+GEF N+GG   +DE+EM   E      KCGLI+QGIEIRP K
Sbjct: 259 KQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPAK 270

[Close]

BLAST of CmaCh11G004100 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.3e-57
Identity = 133/309 (43.04%), Postives = 180/309 (58.25%), Query Frame = 0


Query: 286 EGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDP 345
           E  ++ ++S T+P DAC  ++VS +  +AAQSD++W  FLP ++ SLV +          
Sbjct: 37  EDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSAN------- 96

Query: 346 ISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISH 405
              SKKEIF SL D  +L+++G KSF ++K SGKKC ML A +L IIW D+P YW WI+ 
Sbjct: 97  -HLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITV 156

Query: 406 PESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFK-MNERYYGFDIVPADAKVG 465
           PES+F +VA L    W E+RGKISC MLS  T Y+ Y VFK  N R YGFD+VP +A VG
Sbjct: 157 PESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVG 216

Query: 466 IVGGECCTISVGLDPYLDNSQRKRQRLVWMGSN----TPGHRQRLRWM----GSKTHAPG 525
            VG      SV  +    N+  +     + G +    +   R R  WM      +    G
Sbjct: 217 FVGKVATKKSVYFES--GNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEG 276

Query: 526 INMSGMAL--PKERHDGWFEIEMGEFH-NNG-----GDDEVEMVLKEVNCNYSKCGLIVQ 578
               GM +  PKER DGW E+E+G+F+ NNG     G DE+E+ + E      K GLI+Q
Sbjct: 277 ERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQ 335

[Close]

BLAST of CmaCh11G004100 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 5.3e-54
Identity = 121/296 (40.88%), Postives = 167/296 (56.42%), Query Frame = 0


Query: 286 EGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDP 345
           E  ++NI+S T+P DAC +++VS TF +A  SD +W+ FLP D+ SLV   +        
Sbjct: 52  EDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSR-------- 111

Query: 346 ISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLG-ARDLKIIWTDTPDYWTWIS 405
           + SSKKE++F++CD P+L++DG KSF L+K +GKKC ML   + + I W  TP YW WIS
Sbjct: 112 VFSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWIS 171

Query: 406 HPESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAKVG 465
            PE+RF EV  LL   W E+RG ++ K LS  T Y+AY VFK          VP +A VG
Sbjct: 172 IPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVG 231

Query: 466 IVGGECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGMAL 525
           +VG E             +SQR    + ++G   P  ++R R     T            
Sbjct: 232 LVGQE-------------SSQR---HIYFVG---PSDQRRDRETRDVTR----------- 291

Query: 526 PKERHDGWFEIEMGEFHNNGGDDEVEMVLKEVNCNYSKCGLIVQGIEIRPKKSVLH 581
           P +R DGW E E+G+F N  G D V+  + E+   Y K GLI+QGIE RP KS+ +
Sbjct: 292 PTKRKDGWMEAELGQFFNESGCDVVDTSILEIKTPYWKRGLIIQGIEFRPTKSLFY 309

[Close]

BLAST of CmaCh11G004100 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.0e-54
Identity = 118/295 (40.00%), Postives = 168/295 (56.95%), Query Frame = 0


Query: 286 EGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDP 345
           E  V+ I+S T+P DAC  ++VS TF +A +SDI+W  F+P ++ESL+S+ +        
Sbjct: 41  EECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFKF---- 100

Query: 346 ISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISH 405
              SKKE++F+LCD  +LIDDG KS  ++K + K+CIM+ A +L I W ++P  W WI  
Sbjct: 101 --LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPD 160

Query: 406 PESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAKVGI 465
           P++RF  VA LL+    E+RG+I+ +++S  T Y+AY V+K     YGF+ V  +  VG+
Sbjct: 161 PQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGV 220

Query: 466 VG---GECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGM 525
           VG    E C   +  D  +D   R+R R    G N                        +
Sbjct: 221 VGQDLEESCRRYICFDETMDEQFRRRDR----GKN------------------------L 280

Query: 526 ALPKERHDGWFEIEMGEFHNNGG---DDEVEMVLKEVNCNYSKCGLIVQGIEIRP 575
             P+ R DGW EI++GEF N GG   DDE+EMV  E    + K GLI+QGIEIRP
Sbjct: 281 VKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

[Close]

BLAST of CmaCh11G004100 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-59
Identity = 119/295 (40.34%), Postives = 171/295 (57.97%), Query Frame = 0


Query: 283 VVQEGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLN 342
           V+ E  ++NI+S T+P DAC +++VS TF +A  SD +W+ FLP ++ESLVSR +     
Sbjct: 63  VLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR----- 122

Query: 343 FDPISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTW 402
              + +SKKE++F+LC  P+LI+DG KSF L+K SGK+CIML +++L I W  +P+YW W
Sbjct: 123 ---VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQW 182

Query: 403 ISHPESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAK 462
           IS PESRF ++A LL   W E+RGK S ++LS  T Y+AY VFK  +R  G   +P +  
Sbjct: 183 ISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVG 242

Query: 463 VGIVGGECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGM 522
           +G+VG                 Q   +R ++             ++G +          +
Sbjct: 243 LGLVG-----------------QESSKRFIY-------------FIGPRDRRGRRETRDV 302

Query: 523 ALPKERHDGWFEIEMGEFHNNGGDDEVEMVLKEVNCNYSKCGLIVQGIEIRPKKS 578
             P +R DGW E E+GEF N    DE+E  + E+     K GLI+QGIE RP KS
Sbjct: 303 TKPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRPTKS 319

[Close]

BLAST of CmaCh11G004100 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 226.9 bits (577), Expect = 4.3e-59
Identity = 124/294 (42.18%), Postives = 165/294 (56.12%), Query Frame = 0


Query: 286 EGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDP 345
           E  ++ I+S T P DAC ++ VS TF +  +SDI+W  FLP D+ESL+   +        
Sbjct: 19  EDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSR-------- 78

Query: 346 ISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISH 405
           + SSKKE++FSLC+ P+L DD  KS  L+K SGK+C+ML A +L IIW D P YW WI  
Sbjct: 79  VFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPI 138

Query: 406 PESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAKVGI 465
           PESRF +VA L    W E+RG+ + ++LS  T Y+AY VFK  ++ YGF  V  +A VG+
Sbjct: 139 PESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGV 198

Query: 466 VGGECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGMALP 525
           VG                 Q   +RL+         R+                  +  P
Sbjct: 199 VG-----------------QEPSRRLICFSEAIRRGRR-----------------NVVKP 258

Query: 526 KERHDGWFEIEMGEFHNNGG---DDEVEMVLKEVNCNYSKCGLIVQGIEIRPKK 577
           K+R DGW EIE+GEF N+GG   +DE+EM   E      KCGLI+QGIEIRP K
Sbjct: 259 KQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPAK 270

[Close]

BLAST of CmaCh11G004100 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-58
Identity = 133/309 (43.04%), Postives = 180/309 (58.25%), Query Frame = 0


Query: 286 EGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDP 345
           E  ++ ++S T+P DAC  ++VS +  +AAQSD++W  FLP ++ SLV +          
Sbjct: 37  EDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSAN------- 96

Query: 346 ISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISH 405
              SKKEIF SL D  +L+++G KSF ++K SGKKC ML A +L IIW D+P YW WI+ 
Sbjct: 97  -HLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITV 156

Query: 406 PESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFK-MNERYYGFDIVPADAKVG 465
           PES+F +VA L    W E+RGKISC MLS  T Y+ Y VFK  N R YGFD+VP +A VG
Sbjct: 157 PESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVG 216

Query: 466 IVGGECCTISVGLDPYLDNSQRKRQRLVWMGSN----TPGHRQRLRWM----GSKTHAPG 525
            VG      SV  +    N+  +     + G +    +   R R  WM      +    G
Sbjct: 217 FVGKVATKKSVYFES--GNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEG 276

Query: 526 INMSGMAL--PKERHDGWFEIEMGEFH-NNG-----GDDEVEMVLKEVNCNYSKCGLIVQ 578
               GM +  PKER DGW E+E+G+F+ NNG     G DE+E+ + E      K GLI+Q
Sbjct: 277 ERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQ 335

[Close]

BLAST of CmaCh11G004100 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 213.8 bits (543), Expect = 3.7e-55
Identity = 121/296 (40.88%), Postives = 167/296 (56.42%), Query Frame = 0


Query: 286 EGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDP 345
           E  ++NI+S T+P DAC +++VS TF +A  SD +W+ FLP D+ SLV   +        
Sbjct: 52  EDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSR-------- 111

Query: 346 ISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLG-ARDLKIIWTDTPDYWTWIS 405
           + SSKKE++F++CD P+L++DG KSF L+K +GKKC ML   + + I W  TP YW WIS
Sbjct: 112 VFSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWIS 171

Query: 406 HPESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAKVG 465
            PE+RF EV  LL   W E+RG ++ K LS  T Y+AY VFK          VP +A VG
Sbjct: 172 IPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVG 231

Query: 466 IVGGECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGMAL 525
           +VG E             +SQR    + ++G   P  ++R R     T            
Sbjct: 232 LVGQE-------------SSQR---HIYFVG---PSDQRRDRETRDVTR----------- 291

Query: 526 PKERHDGWFEIEMGEFHNNGGDDEVEMVLKEVNCNYSKCGLIVQGIEIRPKKSVLH 581
           P +R DGW E E+G+F N  G D V+  + E+   Y K GLI+QGIE RP KS+ +
Sbjct: 292 PTKRKDGWMEAELGQFFNESGCDVVDTSILEIKTPYWKRGLIIQGIEFRPTKSLFY 309

[Close]

BLAST of CmaCh11G004100 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 213.0 bits (541), Expect = 6.4e-55
Identity = 118/295 (40.00%), Postives = 168/295 (56.95%), Query Frame = 0


Query: 286 EGVVANILSLTTPSDACRSSAVSGTFHAAAQSDILWNNFLPIDWESLVSRRKTSDLNFDP 345
           E  V+ I+S T+P DAC  ++VS TF +A +SDI+W  F+P ++ESL+S+ +        
Sbjct: 41  EECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFKF---- 100

Query: 346 ISSSKKEIFFSLCDCPLLIDDGNKSFSLDKWSGKKCIMLGARDLKIIWTDTPDYWTWISH 405
              SKKE++F+LCD  +LIDDG KS  ++K + K+CIM+ A +L I W ++P  W WI  
Sbjct: 101 --LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPD 160

Query: 406 PESRFGEVAVLLQAWWVELRGKISCKMLSAATTYAAYFVFKMNERYYGFDIVPADAKVGI 465
           P++RF  VA LL+    E+RG+I+ +++S  T Y+AY V+K     YGF+ V  +  VG+
Sbjct: 161 PQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGV 220

Query: 466 VG---GECCTISVGLDPYLDNSQRKRQRLVWMGSNTPGHRQRLRWMGSKTHAPGINMSGM 525
           VG    E C   +  D  +D   R+R R    G N                        +
Sbjct: 221 VGQDLEESCRRYICFDETMDEQFRRRDR----GKN------------------------L 280

Query: 526 ALPKERHDGWFEIEMGEFHNNGG---DDEVEMVLKEVNCNYSKCGLIVQGIEIRP 575
             P+ R DGW EI++GEF N GG   DDE+EMV  E    + K GLI+QGIEIRP
Sbjct: 281 VKPERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRP 301

The following BLAST results are available for this feature:

BLAST of CmaCh11G004100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E6P4	2.1e-58	40.34	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9ZVQ6	6.0e-58	42.18	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q6NPT8	2.3e-57	43.04	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q9ZVR5	5.3e-54	40.88	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]
Q9ZVQ8	9.0e-54	40.00	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]

BLAST of CmaCh11G004100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02240.1	1.5e-59	40.34	F-box family protein	[more]
AT2G02360.1	4.3e-59	42.18	phloem protein 2-B10	[more]
AT2G02230.1	1.6e-58	43.04	phloem protein 2-B1	[more]
AT2G02250.1	3.7e-55	40.88	phloem protein 2-B2	[more]
AT2G02340.1	6.4e-55	40.00	phloem protein 2-B8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 21..61 e-value: 0.17 score: 21.0 coord: 284..324 e-value: 41.0 score: 4.2
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 18..61 e-value: 8.3E-4 score: 19.2
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 15..61 score: 9.126548
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 116..286 e-value: 3.1E-43 score: 147.3 coord: 379..574 e-value: 5.5E-53 score: 178.9
None	No IPR available	GENE3D	1.20.1280.50		coord: 10..90 e-value: 2.7E-5 score: 26.0
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 285..577 coord: 10..285
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 285..577 coord: 10..285
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 16..121
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 288..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G004100.1	CmaCh11G004100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding