CmaCh11G003870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G003870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	VIN3-like protein 2
Location	Cma_Chr11: 1918549 .. 1924044 (-)
RNA-Seq Expression	CmaCh11G003870
Synteny	CmaCh11G003870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCAAAAATGGTAATTTTATGTATATTTGAATGAATCATATGGGTTTTGGCTACCAACATTAATAACTATAATGGTTGGTCCAATAAGAGTGGCACTGTGATTGGGCAATTATAGGCACACTAGACATGGCATGGGGAACACTATCATTCACCTATTCTGATTATACAAAAAAAAAAAAAAAATAATAAATAAAAATAAATATTTTAATTTTGTTTAAAATATAAACCCAATAAAAAGGAGAAAGAAAATATTTTTTCTCATATTAAAATCACTAATTAATTCAAGAATTTAAGTTTATGAGTTTACTTATGCCGGGAGAAATCAATATTAATATATAATGTCTATTTTGATGACATATTAATCATCTCCACTAAAATACACAATGTCTAAGTGAGTTTGAAAATGGCTTGTCACAATAATTTTGTTCGACATTTAAGAATTATATTGATATGATTAAGTTTAGAGCATGACTCTAATACCATATTATAAATTACGGATATCTACTATGGTAGGATATTATTCATTTTAAGTATAAGAGTGGATAATATTTATAGATTATAACCATAAGAGAGTTGGGAAATGAAGAGGAGATTTAAAGTTAAAAACAATAAGAATAATAATAATAAAGAAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAATCATGCAGCCGCTATGCTATTCTTCATTCATTTGATGATTTGATCGAATCACAGAGTGTCTCTCGATTAAACCTCGCTTCGACGCCACAGCTGCCTCATACTCTTTTATTTTCCCCTCTTTCTCTCTCGACTCCGCCAATCTCCTCTTCAAATTTCCTCTTCCGGACCTCAATCCATGGATTCCTTCATCCGCCTTCACTTTCCCGCTATTTTCTGGTACTGTTTTTCCCCTTTTTCTCTCCTTTCCTTCTTCATCAGTTTCTGTTCTTCTGATTTTTCTCTCGCTCTCTTTCTCTCCGCTCTTCCCTGGTTCATTATCCTTCCAGATTTCGTGCTTTGCAGGTCTGTTTTCGTTCGCTTTTGGTGGTAATGTGGTGGAATCACTGTCTGCTTTCTTTTCAATATGCCTTCCGATTCTTCCTCTGAAGGTAATCTGGTCAATCCTTCATGTTTTATTTCATCCTACCTTTTGACATCGATTTTTGGTTTTTTTTTTTTTATAACTGCCGGCCAATTTTCATTCTTCTAGTTTTGTAGTTGGATTCTTATTCACCTGTTGCTTCTATTGCAATTGTTTTTTTTTTTTTTTTTTTGTCGGAGTTCCATGCGCGCCCGACCTGCAAATTGAGGTAGTGAGGTTTTAGTGGTTTTGGTTCAATTAGCTCCATCTGTTGGTTTTCGCAAACATTCATGTGGAGCTTCTGCGAACACATTTCATAATGACGCTGTATTCAGAAATTTGTGCCGACTAATCATCGACTATGCAACGTAGATTTCTTGAGCTTCTTAGCTGCGCTAGATTCCAAGCTTTTTCGATGAACATAAAATTTGACTTCTTGAATTTATGGATTATAGTTAACCGTATCGATTGCTGGTTGGTGTAGCCTGGATGATCTCTTTGACAATCCGGTCTGAGTTCTCCGGTTCTACTTATTCTTTCCCTACTCCTGTCGGTAACAGTTAGGAAGCTTGCCATGTCCAATTACCCGAGTATCTTCGCTCATTAGAAGGTTCGTTTGGTAAGCGCAGTCAGTAATTGCATGAGAACTGTTCATTATGTTTGATTGCATTCTTGATTTTCAATCATAGGAGGTTTTAGAAATGATCCAAACTTCGAAGTTAAAGGGTATTTATGAGTTCAAATGGGTTGGGTTTTGGATTCAACCTGACACAATTCAACCATGTAGTACTTAACGTTGGATTAACTTCCGGTTGTTTATATATATATTAGTAAACTTATCATAAATGAATAAATTATTATTAATTAATCAAATTCAAATCGGTAAGATCCACCTCAATTTACTTTTACGACTCCATACATGTTCAACTTATTTGAAGTCAAATCCAATGTTACTCGACTCAAACTGGACGGCAGTTGGTACCCTTTTGACGTTTGTCTTTATGTTTTGTTTTTCTTACCTCTGATGTACGTTCTCGTCTATGTTGATACTAGGAGCTCCTCTTGATCCATCAAAATGCAGTAAGACGAGCATGGAGGAGAAAAGAAATTTAGTCTATGAAATATCAGATCAGCCACATGCTTCTGAACTGCTTCAGTCCTGGAGTCGTCAAGAGATTCTAGAGATCCTGTGTGCAGAGATGGGAAAAGAGAGAAAATATACCGGATTAACAAAATTGAAAATAGTCGAGAACCTTCTGAAGATTGTTAGTGAAAAGAAATCAGGGTCAACTGAGAATGTAGCAGACCTTGACCATCAATCTTCTTCACCATATCTTTCTCCAAATATTACCAAAAGGCAAAGAAAAATTGATCAGCCATCACGGCTACCAGTTCCGGAAAACAATATTCCTATCAGTAGCATTAGGAGTGACTCAAATATTGCAGTTTACTGCAGAAATTCAGCATGCAAGGCTACCTTAAATGAAGAGGATAAATTTTGCAAGAGGTGTTCATGCTGCATCTGCTATCAATATGATGATAATAAGGATCCTAGTCTATGGTTAAGTTGCAGCTCTGACCCACCATTTCAAGGCACTTCATGTGGTTTGTCATGCCATCTTGAATGTGCATTGAAGCATGAAAAATCTGGAATTTCTAAAGGACAGCAGGTTGGAGTTGAAGGGACTTTCTATTGTCTATCATGTGGAAAAGTCAACGACTTGCTTGGGTAATTACCGACTTTTACTGACCAACAATTCTGTTAAAGTCTTGCAACATCCTGGATATTTGAATACTATTTATTTTTGCACTGCATCAGACTTCCTTGAATATTTAGTATTTACTATATGAATGACACTTACATTCATTTCTGAAGGAGTTGGAGAAAACAATTGATGAAGGCAAAGGAAACCCGAAGGGTGGATATACTGTGTTACCGCATCTCTTTAGCCAAAAAGATTTTGAGTGAAGGTGAAAAGTATCAAGATGTTTGTCGGATCGTGGATGAGGCTGTGAAGAAACTTGAAGCTGAAGTGGGTCCTTTGACTGGTGTACCGGTTGGTACGGGCAGAGGCATAGTGAACAGGCTTTCTTCAGGACCAGAGGTTCAGAAACTCTGCACGTTAGCCATTGATACACTGGACTCCTTGCTCTCCAAGAAGATCTTGCATCAATCGCCCATTTCCATTATACAAGGTAATTTATTTTATGTAAGGCTACTAACAATTTTGCTCATCTCAATTTCTTTTGACTATGAATATCCCCCTTTGTTGGGATGAAATATGGTCCGAAGAATCTCGATAGTAGTTTCATGAACAATCTTTTGCTTGTGGTATTTGATTTTGTTGCAATTCTATGAACAAATAAAAAAGGGGATTCCATTTTTTTAGTTATTTAGATTTATGGGTCGAATAAACCAGGGCATTAAAATCAAAGCTTTTTGTATTGCTAGCAGTTGGAACAGCCTCCGCATGGTCACTCAGTGTACTTGTGCAGCTGCCCTAGAAGTAATTTAGCATGTAAGATAATCTTTTGAAGTGATTGCTGATATATTCAACAGAACTAAAAAACATATTGGAAATGATATTTGTGTTCAATTATATAGTGTTTCATTAAAGATTTAAAAAAAAAAAAAACAGAATCAGTAACCTGTCTTTTGCTAATATTGCAGACACAAATTTGGTAGCTACAAACTTATTAAGGTTCGAAGATGTTGATGCAACATACCTTACAGTGGTTATGGGTACCGAAGATGTTTCTTCTGGAAAAACTGTTGGTTACAGGCTATGGCATCGAAAGGCATGTGATATAGATTACCCTATAGAGCCAACTTGCATCTTGTCTCAACCCAATTTGAGGTTTGTCGTCCGAGGACTGACCCCATCTTCAGAATATTATTTCAAAGCCATTTCCTTTAATGGGACAGGAGATATGGGGATGTGTGAAGTTCAGATCTCAACTGCTAGTGCTCGGGAGGATCACCCAGGATGCTTGGTGATTGAAAGAAGTCAGAGTTCGGTTACCAACGTTAGTGAGCTCTCTAATCCTTCTTCAGTAGAAGATGAAACAAACAATGTAATGCCTTGTAGCGATCAGACTGATAGTCAAACAGAGAACTATCTTTCTTATTGCAAAGATCCTAACAAGATCATCACTGCTAACCTGTCTAAAGATGCAATAAACTGCACTGATGTCGGTGGAGGAGAAACAGCAAATGATTCTGTTTATTTGTTGGATGAGAAACATGTTACAAAGAAAAGTGGCATGCTGCCTGATCCTAATGTTTTAAAACATGAAGACAAACATTCCTCTGAGATTCATATCATTGAAGATACAAGCGTAAACAACGGGTCAAATTCTGCCGTCGTTCAAGAAGGAACTAAATGCCCACCATTTGTTAACAGCTCTGGGGCTGGATTGCCAGCTACTCCTTGCAAGATGGAAATACTTACGGATGTTCTTGGAAGGAGTGGACGATCGAAGTCCAGTGCCACGGATCGAGAAATCGGGTCTGAGGGAGACAAACTCCGACGTGGCAGCAAATCTAAGAAGAGAAGTGCAGAGATTCGAGATGCTGATTGTACGGCAAATGGTATTTCAGATAAGGATTTTGAGTATTATGTAAAATTGATTAGATGGCTAGAATGCGAGGGACACATAGATAAGAACTTCAGACAAAAATTCTTAACCTGGTACAGCTTGAGTGCCACATCCCAGGAAGTTAGGATTGTGAAGGCCTTTGTTGATAACTTCATTGAAGATCCATCAGCTCTTGCAGAGCAACTTGTGGACACCTTTTCAGAATGCATTTCAAGCAAGAAAACATGTGCTGTGCCTGCTGGATTCTGCATGAAGCTTTGGCATTGATCCTCTCAGAAAGCATCAAATTTAATAAGTCCTAGATTGGAATTATATCGGTTGTAGGCATTCTTTAGATACATTTCCTTTCTTTCTTCATTTAAACTGTCATCAATTGAATTGGCATCATCTTAGCTCTATTTAGCATACTTATGGCGCTAACATGTCATCCACATTCGTCATTTTTAACATATTCAACAGATTTGTAGATGAGTATGATTTAACATTCTTACTCACTGATTGATACCATTTAGCAATTAACTTATGAAACTTGTTTCTGGGGTTTTGAGTGCCTTCTCAACATGATTATGATTTATACACATCGTTAACCATAAAGTGTGAAATTGACAGGCAATCAGGTTCATGTTGGCTACAAGTTAAGAATCTGAGTTCTCGTCATTGCTTGAAATGAGATTGAAACGTCATTTTGAGGTCAAACAGAGCTTCAACGATTGATCTTTCCAATGAAGGATGGAAAATCTCAGAAACTCCCGATCACTGTAGATTCAAGCTATGCAAGATGATGAACAAAGCTTCAAAGAATAAATCTGAGAGAAAGTTGGT

mRNA sequence

ATGGAAGCCAAAAATGAGTGTCTCTCGATTAAACCTCGCTTCGACGCCACAGCTGCCTCATACTCTTTTATTTTCCCCTCTTTCTCTCTCGACTCCGCCAATCTCCTCTTCAAATTTCCTCTTCCGGACCTCAATCCATGGATTCCTTCATCCGCCTTCACTTTCCCGCTATTTTCTGGTCTGTTTTCGTTCGCTTTTGGTGGTAATGTGGTGGAATCACTGTCTGCTTTCTTTTCAATATGCCTTCCGATTCTTCCTCTGAAGGAAGCTTGCCATGTCCAATTACCCGAGTATCTTCGCTCATTAGAAGGTTCGTTTGGAGCTCCTCTTGATCCATCAAAATGCAGTAAGACGAGCATGGAGGAGAAAAGAAATTTAGTCTATGAAATATCAGATCAGCCACATGCTTCTGAACTGCTTCAGTCCTGGAGTCGTCAAGAGATTCTAGAGATCCTGTGTGCAGAGATGGGAAAAGAGAGAAAATATACCGGATTAACAAAATTGAAAATAGTCGAGAACCTTCTGAAGATTGTTAGTGAAAAGAAATCAGGGTCAACTGAGAATGTAGCAGACCTTGACCATCAATCTTCTTCACCATATCTTTCTCCAAATATTACCAAAAGGCAAAGAAAAATTGATCAGCCATCACGGCTACCAGTTCCGGAAAACAATATTCCTATCAGTAGCATTAGGAGTGACTCAAATATTGCAGTTTACTGCAGAAATTCAGCATGCAAGGCTACCTTAAATGAAGAGGATAAATTTTGCAAGAGGTGTTCATGCTGCATCTGCTATCAATATGATGATAATAAGGATCCTAGTCTATGGTTAAGTTGCAGCTCTGACCCACCATTTCAAGGCACTTCATGTGGTTTGTCATGCCATCTTGAATGTGCATTGAAGCATGAAAAATCTGGAATTTCTAAAGGACAGCAGGTTGGAGTTGAAGGGACTTTCTATTGTCTATCATGTGGAAAAGTCAACGACTTGCTTGGGAGTTGGAGAAAACAATTGATGAAGGCAAAGGAAACCCGAAGGGTGGATATACTGTGTTACCGCATCTCTTTAGCCAAAAAGATTTTGAGTGAAGGTGAAAAGTATCAAGATGTTTGTCGGATCGTGGATGAGGCTGTGAAGAAACTTGAAGCTGAAGTGGGTCCTTTGACTGGTGTACCGGTTGGTACGGGCAGAGGCATAGTGAACAGGCTTTCTTCAGGACCAGAGGTTCAGAAACTCTGCACGTTAGCCATTGATACACTGGACTCCTTGCTCTCCAAGAAGATCTTGCATCAATCGCCCATTTCCATTATACAAGACACAAATTTGGTAGCTACAAACTTATTAAGGTTCGAAGATGTTGATGCAACATACCTTACAGTGGTTATGGGTACCGAAGATGTTTCTTCTGGAAAAACTGTTGGTTACAGGCTATGGCATCGAAAGGCATGTGATATAGATTACCCTATAGAGCCAACTTGCATCTTGTCTCAACCCAATTTGAGGTTTGTCGTCCGAGGACTGACCCCATCTTCAGAATATTATTTCAAAGCCATTTCCTTTAATGGGACAGGAGATATGGGGATGTGTGAAGTTCAGATCTCAACTGCTAGTGCTCGGGAGGATCACCCAGGATGCTTGGTGATTGAAAGAAGTCAGAGTTCGGTTACCAACGTTAGTGAGCTCTCTAATCCTTCTTCAGTAGAAGATGAAACAAACAATGTAATGCCTTGTAGCGATCAGACTGATAGTCAAACAGAGAACTATCTTTCTTATTGCAAAGATCCTAACAAGATCATCACTGCTAACCTGTCTAAAGATGCAATAAACTGCACTGATGTCGGTGGAGGAGAAACAGCAAATGATTCTGTTTATTTGTTGGATGAGAAACATGTTACAAAGAAAAGTGGCATGCTGCCTGATCCTAATGTTTTAAAACATGAAGACAAACATTCCTCTGAGATTCATATCATTGAAGATACAAGCGTAAACAACGGGTCAAATTCTGCCGTCGTTCAAGAAGGAACTAAATGCCCACCATTTGTTAACAGCTCTGGGGCTGGATTGCCAGCTACTCCTTGCAAGATGGAAATACTTACGGATGTTCTTGGAAGGAGTGGACGATCGAAGTCCAGTGCCACGGATCGAGAAATCGGGTCTGAGGGAGACAAACTCCGACGTGGCAGCAAATCTAAGAAGAGAAGTGCAGAGATTCGAGATGCTGATTGTACGGCAAATGGTATTTCAGATAAGGATTTTGAGTATTATGTAAAATTGATTAGATGGCTAGAATGCGAGGGACACATAGATAAGAACTTCAGACAAAAATTCTTAACCTGGTACAGCTTGAGTGCCACATCCCAGGAAGTTAGGATTGTGAAGGCCTTTGTTGATAACTTCATTGAAGATCCATCAGCTCTTGCAGAGCAACTTGTGGACACCTTTTCAGAATGCATTTCAAGCAAGAAAACATGTGCTGTGCCTGCTGGATTCTGCATGAAGCTTTGGCATTGATCCTCTCAGAAAGCATCAAATTTAATAAGTCCTAGATTGGAATTATATCGGTTGTAGGCATTCTTTAGATACATTTCCTTTCTTTCTTCATTTAAACTGTCATCAATTGAATTGGCATCATCTTAGCTCTATTTAGCATACTTATGGCGCTAACATGTCATCCACATTCGTCATTTTTAACATATTCAACAGATTTGTAGATGAGTATGATTTAACATTCTTACTCACTGATTGATACCATTTAGCAATTAACTTATGAAACTTGTTTCTGGGGTTTTGAGTGCCTTCTCAACATGATTATGATTTATACACATCGTTAACCATAAAGTGTGAAATTGACAGGCAATCAGGTTCATGTTGGCTACAAGTTAAGAATCTGAGTTCTCGTCATTGCTTGAAATGAGATTGAAACGTCATTTTGAGGTCAAACAGAGCTTCAACGATTGATCTTTCCAATGAAGGATGGAAAATCTCAGAAACTCCCGATCACTGTAGATTCAAGCTATGCAAGATGATGAACAAAGCTTCAAAGAATAAATCTGAGAGAAAGTTGGT

Coding sequence (CDS)

ATGGAAGCCAAAAATGAGTGTCTCTCGATTAAACCTCGCTTCGACGCCACAGCTGCCTCATACTCTTTTATTTTCCCCTCTTTCTCTCTCGACTCCGCCAATCTCCTCTTCAAATTTCCTCTTCCGGACCTCAATCCATGGATTCCTTCATCCGCCTTCACTTTCCCGCTATTTTCTGGTCTGTTTTCGTTCGCTTTTGGTGGTAATGTGGTGGAATCACTGTCTGCTTTCTTTTCAATATGCCTTCCGATTCTTCCTCTGAAGGAAGCTTGCCATGTCCAATTACCCGAGTATCTTCGCTCATTAGAAGGTTCGTTTGGAGCTCCTCTTGATCCATCAAAATGCAGTAAGACGAGCATGGAGGAGAAAAGAAATTTAGTCTATGAAATATCAGATCAGCCACATGCTTCTGAACTGCTTCAGTCCTGGAGTCGTCAAGAGATTCTAGAGATCCTGTGTGCAGAGATGGGAAAAGAGAGAAAATATACCGGATTAACAAAATTGAAAATAGTCGAGAACCTTCTGAAGATTGTTAGTGAAAAGAAATCAGGGTCAACTGAGAATGTAGCAGACCTTGACCATCAATCTTCTTCACCATATCTTTCTCCAAATATTACCAAAAGGCAAAGAAAAATTGATCAGCCATCACGGCTACCAGTTCCGGAAAACAATATTCCTATCAGTAGCATTAGGAGTGACTCAAATATTGCAGTTTACTGCAGAAATTCAGCATGCAAGGCTACCTTAAATGAAGAGGATAAATTTTGCAAGAGGTGTTCATGCTGCATCTGCTATCAATATGATGATAATAAGGATCCTAGTCTATGGTTAAGTTGCAGCTCTGACCCACCATTTCAAGGCACTTCATGTGGTTTGTCATGCCATCTTGAATGTGCATTGAAGCATGAAAAATCTGGAATTTCTAAAGGACAGCAGGTTGGAGTTGAAGGGACTTTCTATTGTCTATCATGTGGAAAAGTCAACGACTTGCTTGGGAGTTGGAGAAAACAATTGATGAAGGCAAAGGAAACCCGAAGGGTGGATATACTGTGTTACCGCATCTCTTTAGCCAAAAAGATTTTGAGTGAAGGTGAAAAGTATCAAGATGTTTGTCGGATCGTGGATGAGGCTGTGAAGAAACTTGAAGCTGAAGTGGGTCCTTTGACTGGTGTACCGGTTGGTACGGGCAGAGGCATAGTGAACAGGCTTTCTTCAGGACCAGAGGTTCAGAAACTCTGCACGTTAGCCATTGATACACTGGACTCCTTGCTCTCCAAGAAGATCTTGCATCAATCGCCCATTTCCATTATACAAGACACAAATTTGGTAGCTACAAACTTATTAAGGTTCGAAGATGTTGATGCAACATACCTTACAGTGGTTATGGGTACCGAAGATGTTTCTTCTGGAAAAACTGTTGGTTACAGGCTATGGCATCGAAAGGCATGTGATATAGATTACCCTATAGAGCCAACTTGCATCTTGTCTCAACCCAATTTGAGGTTTGTCGTCCGAGGACTGACCCCATCTTCAGAATATTATTTCAAAGCCATTTCCTTTAATGGGACAGGAGATATGGGGATGTGTGAAGTTCAGATCTCAACTGCTAGTGCTCGGGAGGATCACCCAGGATGCTTGGTGATTGAAAGAAGTCAGAGTTCGGTTACCAACGTTAGTGAGCTCTCTAATCCTTCTTCAGTAGAAGATGAAACAAACAATGTAATGCCTTGTAGCGATCAGACTGATAGTCAAACAGAGAACTATCTTTCTTATTGCAAAGATCCTAACAAGATCATCACTGCTAACCTGTCTAAAGATGCAATAAACTGCACTGATGTCGGTGGAGGAGAAACAGCAAATGATTCTGTTTATTTGTTGGATGAGAAACATGTTACAAAGAAAAGTGGCATGCTGCCTGATCCTAATGTTTTAAAACATGAAGACAAACATTCCTCTGAGATTCATATCATTGAAGATACAAGCGTAAACAACGGGTCAAATTCTGCCGTCGTTCAAGAAGGAACTAAATGCCCACCATTTGTTAACAGCTCTGGGGCTGGATTGCCAGCTACTCCTTGCAAGATGGAAATACTTACGGATGTTCTTGGAAGGAGTGGACGATCGAAGTCCAGTGCCACGGATCGAGAAATCGGGTCTGAGGGAGACAAACTCCGACGTGGCAGCAAATCTAAGAAGAGAAGTGCAGAGATTCGAGATGCTGATTGTACGGCAAATGGTATTTCAGATAAGGATTTTGAGTATTATGTAAAATTGATTAGATGGCTAGAATGCGAGGGACACATAGATAAGAACTTCAGACAAAAATTCTTAACCTGGTACAGCTTGAGTGCCACATCCCAGGAAGTTAGGATTGTGAAGGCCTTTGTTGATAACTTCATTGAAGATCCATCAGCTCTTGCAGAGCAACTTGTGGACACCTTTTCAGAATGCATTTCAAGCAAGAAAACATGTGCTGTGCCTGCTGGATTCTGCATGAAGCTTTGGCATTGA

Protein sequence

MEAKNECLSIKPRFDATAASYSFIFPSFSLDSANLLFKFPLPDLNPWIPSSAFTFPLFSGLFSFAFGGNVVESLSAFFSICLPILPLKEACHVQLPEYLRSLEGSFGAPLDPSKCSKTSMEEKRNLVYEISDQPHASELLQSWSRQEILEILCAEMGKERKYTGLTKLKIVENLLKIVSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQPSRLPVPENNIPISSIRSDSNIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQGTSCGLSCHLECALKHEKSGISKGQQVGVEGTFYCLSCGKVNDLLGSWRKQLMKAKETRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLTGVPVGTGRGIVNRLSSGPEVQKLCTLAIDTLDSLLSKKILHQSPISIIQDTNLVATNLLRFEDVDATYLTVVMGTEDVSSGKTVGYRLWHRKACDIDYPIEPTCILSQPNLRFVVRGLTPSSEYYFKAISFNGTGDMGMCEVQISTASAREDHPGCLVIERSQSSVTNVSELSNPSSVEDETNNVMPCSDQTDSQTENYLSYCKDPNKIITANLSKDAINCTDVGGGETANDSVYLLDEKHVTKKSGMLPDPNVLKHEDKHSSEIHIIEDTSVNNGSNSAVVQEGTKCPPFVNSSGAGLPATPCKMEILTDVLGRSGRSKSSATDREIGSEGDKLRRGSKSKKRSAEIRDADCTANGISDKDFEYYVKLIRWLECEGHIDKNFRQKFLTWYSLSATSQEVRIVKAFVDNFIEDPSALAEQLVDTFSECISSKKTCAVPAGFCMKLWH

Homology

[Close]

BLAST of CmaCh11G003870 vs. ExPASy Swiss-Prot
Match: Q9SUM4 (VIN3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=VIL2 PE=1 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 5.1e-175
Identity = 360/776 (46.39%), Postives = 472/776 (60.82%), Query Frame = 0


Query: 101 SLEGSFGAPLDPSKCSKTSMEEKRNLVYEISDQPH-ASELLQSWSRQEILEILCAEMGKE 160
           SL+G+ G   D SKCS+ S++EKR LVYE+S Q H A+E+LQ+WSRQEIL+ILCAEMGKE
Sbjct: 4   SLDGAAG---DSSKCSEMSVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKE 63

Query: 161 RKYTGLTKLKIVENLLKIVSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQPSRLP 220
           RKYTGLTK+KI+E LLKIVSEK SG  E       + S        TKRQRK+D PSR  
Sbjct: 64  RKYTGLTKVKIIETLLKIVSEKNSGECEG----KKRDSDCLPIQRNTKRQRKVDNPSRYV 123

Query: 221 VPENNIPISSIRSDS---------NIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDN 280
           +P  NI  S+  S S         +  +YC+N AC+A L +ED FC+RCSCCIC +YDDN
Sbjct: 124 IPATNIVTSNNASGSCSSVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDN 183

Query: 281 KDPSLWLSCSSDPPFQGTSCGLSCHLECALKHEKSGISKGQQVGVEG-TFYCLSCGKVND 340
           KDPSLWL+CSSDPPF+G SCG SCHLECA   EKSG+ K +Q   EG  FYC+SCGK N 
Sbjct: 184 KDPSLWLTCSSDPPFEGESCGFSCHLECAFNTEKSGLGKDKQ--SEGCCFYCVSCGKANS 243

Query: 341 LLGSWRKQLMKAKETRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLT 400
           LL  W+KQL  AKETRRV++LCYR+ L +K+L    KY+++C +VDEAVK LEA+VGPLT
Sbjct: 244 LLECWKKQLTIAKETRRVEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLT 303

Query: 401 GVPVGTGRGIVNRLSSGPEVQKLCTLAIDTLDSL-----------------LSKKILHQS 460
           G+P+  GRGIVNRL SGP+VQKLC+ A+++L+++                 + +   +  
Sbjct: 304 GLPMKMGRGIVNRLHSGPDVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDCSYVL 363

Query: 461 PISIIQDTNLVATNLLRFEDVDATYLTVVMGTEDV-SSGKTVGYRLWHRKACDIDYPIEP 520
              I  DT    +  +RFEDV+AT LTVV+ + ++ S    V Y +WHRK  + DYP + 
Sbjct: 364 SNEISADTATTGSTKIRFEDVNATSLTVVLASNEIPSPPNIVHYSIWHRKVPEKDYPEKS 423

Query: 521 TCILSQPNLRFVVRGLTPSSEYYFKAISFNGTGDMGMCEVQISTASAREDHPGCLVIERS 580
           TC L  PN RFVV GL P+SEY FK +S++GT +MG+ E+ + T SA E       +ERS
Sbjct: 424 TCTLFIPNTRFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGANCSSAVERS 483

Query: 581 QSSVTNVSEL-SNPSSVEDETNN--VMPCSDQTDSQTENYLSYCKDPNKIITANLSKDAI 640
            S +TN S L SNPSSVE E+NN  ++P    + ++  N  S  +   K +      D +
Sbjct: 484 VSPLTNCSTLSSNPSSVEAESNNDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIV 543

Query: 641 NCTDVGGGETANDSVYLLDEKHVTKKSGMLPDPNVLKHEDKHSSEIHIIEDTSVNNGSNS 700
                   E   + + LLD++   ++  +L         DK  SE  ++  T    G+  
Sbjct: 544 QI------EKDVEQIVLLDDE---EQEAVL---------DKTESETPVVVTTKSLVGNR- 603

Query: 701 AVVQEGTKCPPFVNSSGAGLPATPCKMEILTDVLGRSGRSKSSATDREIGSEGDKLRRGS 760
                        NSS A LP TP + +   ++  R  R + S  D              
Sbjct: 604 -------------NSSDASLPITPFRSD---EIKNRQARIEISMKD-------------- 663

Query: 761 KSKKRSAEIRDADCTANGISDKDFEYYVKLIRWLECEGHIDKNFRQKFLTWYSLSATSQE 820
                     + D +ANG ++   E+ VK+IR LEC GHIDKNFRQKFLTWYSL ATSQE
Sbjct: 664 -------NCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWYSLRATSQE 714

Query: 821 VRIVKAFVDNFIEDPSALAEQLVDTFSECISSKK--------TCAVPAGFCMKLWH 837
           +R+VK F+D FI+DP ALAEQL+DTF + +S K+        +  VP+GFCMKLWH
Sbjct: 724 IRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCMKLWH 714

[Close]

BLAST of CmaCh11G003870 vs. ExPASy Swiss-Prot
Match: Q9FIE3 (Protein VERNALIZATION INSENSITIVE 3 OS=Arabidopsis thaliana OX=3702 GN=VIN3 PE=1 SV=2)

HSP 1 Score: 434.5 bits (1116), Expect = 2.7e-120
Identity = 289/751 (38.48%), Postives = 391/751 (52.06%), Query Frame = 0


Query: 96  PEYLRSLEGSFGAPLDPSKCSKTSMEEKRNLVYEISDQP-HASELLQSWSRQEILEILCA 155
           PE + S        ++  K +  ++ E+R L++ +S+QP  ASELL SWSR EI++I+CA
Sbjct: 18  PENMDSSSFEDNECIETCKPNVLNVSERRELIHALSNQPEEASELLNSWSRNEIMKIICA 77

Query: 156 EMGKERKYTGLTKLKIVENLLKIVSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQ 215
           EMGKERKYTGL K K++ENLL +VS            L   S S     N  K+++K+  
Sbjct: 78  EMGKERKYTGLNKPKLIENLLNLVSR----------PLGETSCSD--RRNSRKKEKKM-- 137

Query: 216 PSRLPVPENNIPISSIRSDSNIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDNKDPS 275
                                  + C N AC+A L  +D FC+RCSCCIC ++DDNKDPS
Sbjct: 138 -------------------IGYIICCENLACRAALGCDDTFCRRCSCCICQKFDDNKDPS 197

Query: 276 LWLSCSSDPPFQGTSCGLSCHLECALKHEKSGISKGQQVGVEGTFYCLSCGKVNDLLGSW 335
           LWL+C         +CG SCHLEC LK ++ GI       ++G FYC  CGK NDLLG W
Sbjct: 198 LWLTCD--------ACGSSCHLECGLKQDRYGIGSDD---LDGRFYCAYCGKDNDLLGCW 257

Query: 336 RKQLMKAKETRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLTGVPVG 395
           RKQ+  AKETRRVD+LCYR+SL +K+L    KY+++  ++DEAVKKLE +VGPL+G  + 
Sbjct: 258 RKQVKVAKETRRVDVLCYRLSLGQKLLRGTTKYRNLLELMDEAVKKLEGDVGPLSGWAMK 317

Query: 396 TGRGIVNRLSSGPEVQKLCTLAIDTLDSLLSKKILHQSPISIIQDTNLVATNLLRFEDVD 455
             RGIVNRLSSG  VQKLC+ A++ LD ++       SP   +       T  +R E++ 
Sbjct: 318 MARGIVNRLSSGVHVQKLCSQAMEALDKVV-------SPSESVSGQGDKMT--VRVEEIQ 377

Query: 456 ATYLTVVMGTEDVSS---GKTVGYRLWHRKACDIDYPIEPTCILSQPNLRFVVRGLTPSS 515
           A  +TV + +E+ SS    K  G+RL+ RK+ D +   +  C++  P     ++GL P +
Sbjct: 378 ARSVTVRVDSEEPSSSTQNKITGFRLFCRKSKDEECSSQGNCVVYLPETTSAIQGLEPDT 437

Query: 516 EYYFKAISFNGTGDMGMCEVQISTASAREDHPGCLVIERSQSSVTNVSE--LSNPSSVED 575
           E+  + +SFN  GD+   E++ +T     D  G       QS +TN S    SNPS  ED
Sbjct: 438 EFCLRVVSFNEEGDLDESELRFTTLKDDGDEAG-----DQQSPLTNSSSGLCSNPSLPED 497

Query: 576 ETNNV-MPCSDQTDSQTENYLSYCKDPNKIITANLSKDAINCTDVGGGETANDSVYLLDE 635
           E+NNV   CS                       N  KD  N      GE  ++   L +E
Sbjct: 498 ESNNVNKSCS---------------------KGNGDKD--NTEHCSAGEVESE---LEEE 557

Query: 636 KHVTKKSGMLPDPNVLKHEDKHSSEIHIIEDTSVNNGSNSAVVQEGTKCPPFVNSSGAGL 695
           + V +K+  +                                              G  L
Sbjct: 558 RLVKRKANKI---------------------------------------------DGRDL 617

Query: 696 PATPCKMEILTDVLGRSGRSKSSATDREIGSEGDKLRRGSKSKKRSAEIRDADCTANGIS 755
             TPCK +I     G + R KS                   S     EI +A   ANG+ 
Sbjct: 618 LVTPCKRDIYKGKQGGNKRFKSRTV----------------SLNEKPEINNA---ANGVG 620

Query: 756 DKDFEYYVKLIRWLECEGHIDKNFRQKFLTWYSLSATSQEVRIVKAFVDNFIEDPSALAE 815
           DKD  + VK IR LE EGHIDK+FR++FLTWYSL AT +EVR+VK FV+ F+ED S+L +
Sbjct: 678 DKDLGHIVKTIRCLEEEGHIDKSFRERFLTWYSLRATHREVRVVKIFVETFMEDLSSLGQ 620

Query: 816 QLVDTFSECISSKKTC---AVPAGFCMKLWH 837
           QLVDTFSE I SK++     VPAG C+KLWH
Sbjct: 738 QLVDTFSESILSKRSSTNGVVPAGICLKLWH 620

[Close]

BLAST of CmaCh11G003870 vs. ExPASy Swiss-Prot
Match: Q5BPT4 (VIN3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=VIL3 PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.5e-75
Identity = 219/722 (30.33%), Postives = 314/722 (43.49%), Query Frame = 0


Query: 107 GAPLDPSKCSKTSMEEKRNLVYEISDQPHA--SELLQSWSRQEILEILCAEMGKERKYTG 166
           GA  D    SK S +++R LV ++S +      E+L+ WS  EI E+L AE  K+ KYTG
Sbjct: 7   GAAGDSMGSSKMSFDQRRQLVLKLSKESEREFKEVLKDWSCNEIRELLRAESKKDIKYTG 66

Query: 167 LTKLKIVENLLKIVSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQPSRLPVPENN 226
           LTK +I+  L  IVS+K +         DH+      SP   KRQ++          +  
Sbjct: 67  LTKDEIITRLFNIVSKKNT--------RDHEVEEIIPSP---KRQKR----------DLV 126

Query: 227 IPISSIRSDSNIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPP 286
            P++  +      +YC+N AC+  L EE  FCKRCSCCIC++YDDNKDPSLWL+C+SD  
Sbjct: 127 TPLAKAKGKGK--MYCQNLACQNKLREEATFCKRCSCCICFKYDDNKDPSLWLTCNSDSQ 186

Query: 287 FQGTSCGLSCHLECALKHEKSGISKG-QQVGVEGTFYCLSCGKVNDLLGSWRKQLMKAKE 346
           F G SCGLSCHL CA   EKSG+ +      ++G F C+SCGK N  +   +KQL+ A E
Sbjct: 187 FDGESCGLSCHLNCAFDSEKSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIANE 246

Query: 347 TRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVG-PLTGVPVGTGRGIVNR 406
            RRV + CYRI LA K+L   +KY  V   V++AV  L+ E G P++ +P    RG+VNR
Sbjct: 247 ERRVGVFCYRILLAHKLLKGTKKYIIVSEEVEKAVMHLKNEFGVPISCLPSKMSRGLVNR 306

Query: 407 LSSGPEVQKLCTLAIDTLDSLLSKKILHQSPISIIQDTNLVATNLLRFEDVDATYLTV-V 466
           L    +V+K C+ A+  LD L         P+     + +  +  +R E V AT +T  +
Sbjct: 307 LCCAEKVKKHCSSALKELDGL---------PL----PSTIQGSMKIRIESVLATSVTFDI 366

Query: 467 MGTEDVSSGKTVGYRLWHRKACDIDYPIEPTCIL--SQPNLRFVVRGLTPSSEYYFKAIS 526
              E  S G T  YR+ +RK  +     + T  L  +  + RF V  LTP++EY+FK +S
Sbjct: 367 EAEESFSWGDTNHYRMVYRKVSEKHSSKDLTRELFSTSSHQRFTVMELTPATEYWFKIVS 426

Query: 527 FNGTGDMGMCEVQISTASAREDHPGCLVIERSQSSVTNVSELSNPSSVEDETNNVMPCSD 586
           F+G  ++ + E  +ST + +++    +++                               
Sbjct: 427 FSGVEELSVDEFIVSTKTLQDEEVAAVLLN------------------------------ 486

Query: 587 QTDSQTENYLSYCKDPNKIITANLSKDAINCTDVGGGETANDSVYLLDEKHVTKKSGMLP 646
                    +S C + NK+                                  +KSG   
Sbjct: 487 ---------MSNCNNANKM----------------------------------EKSG--- 509

Query: 647 DPNVLKHEDKHSSEIHIIEDTSVNNGSNSAVVQEGTKCPPFVNSSGAGLPATPCKMEILT 706
                                                                       
Sbjct: 547 ------------------------------------------------------------ 509

Query: 707 DVLGRSGRSKSSATDREIGSEGDKLRRGSKSKKRSAEIRDADCTANGISDKDFEYYVKLI 766
                                                     C+        FE  V LI
Sbjct: 607 -----------------------------------------SCSFG------FEECVNLI 509

Query: 767 RWLECEGHIDKNFRQKFLTWYSLSATSQEVRIVKAFVDNFIEDPSALAEQLVDTFSECIS 822
           R LEC G +  +FR+KFLTWY L AT +E  +V+ FVD F +D  ALA+QL+DTFS+CI+
Sbjct: 667 RQLECSGQVKSDFRKKFLTWYCLKATDKEKHVVEIFVDTFKDDKEALAKQLIDTFSDCIT 509

[Close]

BLAST of CmaCh11G003870 vs. ExPASy Swiss-Prot
Match: Q9LHF5 (VIN3-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=VIL1 PE=1 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 8.6e-66
Identity = 190/603 (31.51%), Postives = 292/603 (48.42%), Query Frame = 0


Query: 240 CRNSACKATLNEEDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQGTSCGLSCHLECA 299
           C+N++C+A + +ED FCKRCSCC+C+ +D+NKDPSLWL C  +       CGLSCH+ECA
Sbjct: 49  CKNASCRANVPKEDSFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDDVEFCGLSCHIECA 108

Query: 300 LKHEKSG-ISKGQQVGVEGTFYCLSCGKVNDLLGSWRKQLMKAKETRRVDILCYRISLAK 359
            +  K G I+ G  + ++G F C SCGKV+ +LG W+KQL+ AKE RR D LCYRI L  
Sbjct: 109 FREVKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEARRRDGLCYRIDLGY 168

Query: 360 KILSEGEKYQDVCRIVDEAVKKLEAEVGPLTGVPVGTGRGIVNRLSSGPEVQKLCTLAID 419
           ++L+   ++ ++  IV  A   LE EVGPL G    T RGIV+RL     VQ+LCT AI 
Sbjct: 169 RLLNGTSRFSELHEIVRAAKSMLEDEVGPLDGPTARTDRGIVSRLPVAANVQELCTSAIK 228

Query: 420 TLDSLLSKKILHQSPISIIQDTNLVATNLLRFEDVDATYLTV-VMGTEDVSSGKTVGYRL 479
               L +       P          A     FED+    +T+ ++           GY+L
Sbjct: 229 KAGELSANAGRDLVP----------AACRFHFEDIAPKQVTLRLIELPSAVEYDVKGYKL 288

Query: 480 WHRKACDIDYPIEPTCI-LSQPNLRFVVRGLTPSSEYYFKAISFNGTGDMGMCEVQISTA 539
           W+ K  ++  P +   +  S+   R V+  L P +EY F+ +S+   G  G       T 
Sbjct: 289 WYFKKGEM--PEDDLFVDCSRTERRMVISDLEPCTEYTFRVVSYTEAGIFGHSNAMCFTK 348

Query: 540 SAREDHPGCLVIERSQSSVTNVSELSNPSSVEDETNNVMPCSDQTDSQTENYLSYCKDPN 599
           S     P    ++  +    ++   + PS  E++++     S     Q   Y+   +   
Sbjct: 349 SVEILKP----VDGKEKRTIDLVGNAQPSDREEKSS---ISSRFQIGQLGKYVQLAEAQE 408

Query: 600 KIITANLSKDAINCTDVGGGETANDSVYLLDEKHVTKKSGMLPDPNVLKHEDKHSSEIHI 659
                               E   ++ Y +D + + +     P    L     H  ++++
Sbjct: 409 --------------------EGLLEAFYNVDTEKICE-----PPEEELPPRRPHGFDLNV 468

Query: 660 IEDTSVNNGSNSAVVQEGTKCPPFVNSSGA---GLP------ATPCKMEILTDVLGRSGR 719
           +    +N        +E T  PP  +SSG    G+P      A     +   D    +GR
Sbjct: 469 VSVPDLN--------EEFT--PP--DSSGGEDNGVPLNSLAEADGGDHDDNCDDAVSNGR 528

Query: 720 SKSSATDREIGSEGD--------KLRRGSKSKKRSAEIRDADCTANGISDKDFEYYVKLI 779
            K++  D  + S+G          + R  K+   S +  + +C ++ I D   E  VK+I
Sbjct: 529 RKNN-NDCLVISDGSGDDTGFDFLMTRKRKAISDSNDSENHECDSSSIDD-TLEKCVKVI 588

Query: 780 RWLECEGHIDKNFRQKFLTWYSLSATSQEVRIVKAFVDNFIEDPSALAEQLVDTFSECIS 823
           RWLE EGHI   FR +FLTW+S+S+T+QE  +V  FV    +DP +LA QLVD F++ +S
Sbjct: 589 RWLEREGHIKTTFRVRFLTWFSMSSTAQEQSVVSTFVQTLEDDPGSLAGQLVDAFTDVVS 593

[Close]

BLAST of CmaCh11G003870 vs. TAIR 10
Match: AT4G30200.3 (vernalization5/VIN3-like )

HSP 1 Score: 621.7 bits (1602), Expect = 8.6e-178
Identity = 363/764 (47.51%), Postives = 474/764 (62.04%), Query Frame = 0


Query: 101 SLEGSFGAPLDPSKCSKTSMEEKRNLVYEISDQPH-ASELLQSWSRQEILEILCAEMGKE 160
           SL+G+ G   D SKCS+ S++EKR LVYE+S Q H A+E+LQ+WSRQEIL+ILCAEMGKE
Sbjct: 4   SLDGAAG---DSSKCSEMSVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKE 63

Query: 161 RKYTGLTKLKIVENLLKIVSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQPSRLP 220
           RKYTGLTK+KI+E LLKIVSEK SG  E       + S        TKRQRK+D PSR  
Sbjct: 64  RKYTGLTKVKIIETLLKIVSEKNSGECEG----KKRDSDCLPIQRNTKRQRKVDNPSRYV 123

Query: 221 VPENNIPISSIRSDS---------NIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDN 280
           +P  NI  S+  S S         +  +YC+N AC+A L +ED FC+RCSCCIC +YDDN
Sbjct: 124 IPATNIVTSNNASGSCSSVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDN 183

Query: 281 KDPSLWLSCSSDPPFQGTSCGLSCHLECALKHEKSGISKGQQVGVEG-TFYCLSCGKVND 340
           KDPSLWL+CSSDPPF+G SCG SCHLECA   EKSG+ K +Q   EG  FYC+SCGK N 
Sbjct: 184 KDPSLWLTCSSDPPFEGESCGFSCHLECAFNTEKSGLGKDKQ--SEGCCFYCVSCGKANS 243

Query: 341 LLGSWRKQLMKAKETRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLT 400
           LL  W+KQL  AKETRRV++LCYR+ L +K+L    KY+++C +VDEAVK LEA+VGPLT
Sbjct: 244 LLECWKKQLTIAKETRRVEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLT 303

Query: 401 GVPVGTGRGIVNRLSSGPEVQKLCTLAIDTLDSLLSKK---ILHQSPIS--IIQDTNLVA 460
           G+P+  GRGIVNRL SGP+VQKLC+ A+++L+++ +         SP S  + QDT    
Sbjct: 304 GLPMKMGRGIVNRLHSGPDVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDTATTG 363

Query: 461 TNLLRFEDVDATYLTVVMGTEDV-SSGKTVGYRLWHRKACDIDYPIEPTCILSQPNLRFV 520
           +  +RFEDV+AT LTVV+ + ++ S    V Y +WHRK  + DYP + TC L  PN RFV
Sbjct: 364 STKIRFEDVNATSLTVVLASNEIPSPPNIVHYSIWHRKVPEKDYPEKSTCTLFIPNTRFV 423

Query: 521 VRGLTPSSEYYFKAISFNGTGDMGMCEVQISTASAREDHPGCLVIERSQSSVTNVSEL-S 580
           V GL P+SEY FK +S++GT +MG+ E+ + T SA E       +ERS S +TN S L S
Sbjct: 424 VSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGANCSSAVERSVSPLTNCSTLSS 483

Query: 581 NPSSVEDETNN--VMPCSDQTDSQTENYLSYCKDPNKIITANLSKDAINCTDVGGGETAN 640
           NPSSVE E+NN  ++P    + ++  N  S  +   K +      D +        E   
Sbjct: 484 NPSSVEAESNNDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIVQI------EKDV 543

Query: 641 DSVYLLDEKHVTKKSGMLPDPNVLKHEDKHSSEIHIIEDTSVNNGSNSAVVQEGTKCPPF 700
           + + LLD++   ++  +L         DK  SE  ++  T    G+              
Sbjct: 544 EQIVLLDDE---EQEAVL---------DKTESETPVVVTTKSLVGNR------------- 603

Query: 701 VNSSGAGLPATPCKMEILTDVLGRSGRSKSSATDREIGSEGDKLRRGSKSKKRSAEIRDA 760
            NSS A LP TP + +   ++  R  R + S  D                        + 
Sbjct: 604 -NSSDASLPITPFRSD---EIKNRQARIEISMKD---------------------NCNNG 663

Query: 761 DCTANGISDKDFEYYVKLIRWLECEGHIDKNFRQKFLTWYSLSATSQEVRIVKAFVDNFI 820
           D +ANG ++   E+ VK+IR LEC GHIDKNFRQKFLTWYSL ATSQE+R+VK F+D FI
Sbjct: 664 DHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWYSLRATSQEIRVVKIFIDTFI 702

Query: 821 EDPSALAEQLVDTFSECISSKK--------TCAVPAGFCMKLWH 837
           +DP ALAEQL+DTF + +S K+        +  VP+GFCMKLWH
Sbjct: 724 DDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCMKLWH 702

[Close]

BLAST of CmaCh11G003870 vs. TAIR 10
Match: AT4G30200.2 (vernalization5/VIN3-like )

HSP 1 Score: 616.3 bits (1588), Expect = 3.6e-176
Identity = 360/776 (46.39%), Postives = 472/776 (60.82%), Query Frame = 0


Query: 101 SLEGSFGAPLDPSKCSKTSMEEKRNLVYEISDQPH-ASELLQSWSRQEILEILCAEMGKE 160
           SL+G+ G   D SKCS+ S++EKR LVYE+S Q H A+E+LQ+WSRQEIL+ILCAEMGKE
Sbjct: 4   SLDGAAG---DSSKCSEMSVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKE 63

Query: 161 RKYTGLTKLKIVENLLKIVSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQPSRLP 220
           RKYTGLTK+KI+E LLKIVSEK SG  E       + S        TKRQRK+D PSR  
Sbjct: 64  RKYTGLTKVKIIETLLKIVSEKNSGECEG----KKRDSDCLPIQRNTKRQRKVDNPSRYV 123

Query: 221 VPENNIPISSIRSDS---------NIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDN 280
           +P  NI  S+  S S         +  +YC+N AC+A L +ED FC+RCSCCIC +YDDN
Sbjct: 124 IPATNIVTSNNASGSCSSVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDN 183

Query: 281 KDPSLWLSCSSDPPFQGTSCGLSCHLECALKHEKSGISKGQQVGVEG-TFYCLSCGKVND 340
           KDPSLWL+CSSDPPF+G SCG SCHLECA   EKSG+ K +Q   EG  FYC+SCGK N 
Sbjct: 184 KDPSLWLTCSSDPPFEGESCGFSCHLECAFNTEKSGLGKDKQ--SEGCCFYCVSCGKANS 243

Query: 341 LLGSWRKQLMKAKETRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLT 400
           LL  W+KQL  AKETRRV++LCYR+ L +K+L    KY+++C +VDEAVK LEA+VGPLT
Sbjct: 244 LLECWKKQLTIAKETRRVEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLT 303

Query: 401 GVPVGTGRGIVNRLSSGPEVQKLCTLAIDTLDSL-----------------LSKKILHQS 460
           G+P+  GRGIVNRL SGP+VQKLC+ A+++L+++                 + +   +  
Sbjct: 304 GLPMKMGRGIVNRLHSGPDVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDCSYVL 363

Query: 461 PISIIQDTNLVATNLLRFEDVDATYLTVVMGTEDV-SSGKTVGYRLWHRKACDIDYPIEP 520
              I  DT    +  +RFEDV+AT LTVV+ + ++ S    V Y +WHRK  + DYP + 
Sbjct: 364 SNEISADTATTGSTKIRFEDVNATSLTVVLASNEIPSPPNIVHYSIWHRKVPEKDYPEKS 423

Query: 521 TCILSQPNLRFVVRGLTPSSEYYFKAISFNGTGDMGMCEVQISTASAREDHPGCLVIERS 580
           TC L  PN RFVV GL P+SEY FK +S++GT +MG+ E+ + T SA E       +ERS
Sbjct: 424 TCTLFIPNTRFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGANCSSAVERS 483

Query: 581 QSSVTNVSEL-SNPSSVEDETNN--VMPCSDQTDSQTENYLSYCKDPNKIITANLSKDAI 640
            S +TN S L SNPSSVE E+NN  ++P    + ++  N  S  +   K +      D +
Sbjct: 484 VSPLTNCSTLSSNPSSVEAESNNDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIV 543

Query: 641 NCTDVGGGETANDSVYLLDEKHVTKKSGMLPDPNVLKHEDKHSSEIHIIEDTSVNNGSNS 700
                   E   + + LLD++   ++  +L         DK  SE  ++  T    G+  
Sbjct: 544 QI------EKDVEQIVLLDDE---EQEAVL---------DKTESETPVVVTTKSLVGNR- 603

Query: 701 AVVQEGTKCPPFVNSSGAGLPATPCKMEILTDVLGRSGRSKSSATDREIGSEGDKLRRGS 760
                        NSS A LP TP + +   ++  R  R + S  D              
Sbjct: 604 -------------NSSDASLPITPFRSD---EIKNRQARIEISMKD-------------- 663

Query: 761 KSKKRSAEIRDADCTANGISDKDFEYYVKLIRWLECEGHIDKNFRQKFLTWYSLSATSQE 820
                     + D +ANG ++   E+ VK+IR LEC GHIDKNFRQKFLTWYSL ATSQE
Sbjct: 664 -------NCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLTWYSLRATSQE 714

Query: 821 VRIVKAFVDNFIEDPSALAEQLVDTFSECISSKK--------TCAVPAGFCMKLWH 837
           +R+VK F+D FI+DP ALAEQL+DTF + +S K+        +  VP+GFCMKLWH
Sbjct: 724 IRVVKIFIDTFIDDPMALAEQLIDTFDDRVSIKRSAVGGSGASAVVPSGFCMKLWH 714

[Close]

BLAST of CmaCh11G003870 vs. TAIR 10
Match: AT4G30200.1 (vernalization5/VIN3-like )

HSP 1 Score: 608.2 bits (1567), Expect = 9.8e-174
Identity = 354/746 (47.45%), Postives = 462/746 (61.93%), Query Frame = 0


Query: 119 SMEEKRNLVYEISDQPH-ASELLQSWSRQEILEILCAEMGKERKYTGLTKLKIVENLLKI 178
           S++EKR LVYE+S Q H A+E+LQ+WSRQEIL+ILCAEMGKERKYTGLTK+KI+E LLKI
Sbjct: 2   SVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKERKYTGLTKVKIIETLLKI 61

Query: 179 VSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQPSRLPVPENNIPISSIRSDS--- 238
           VSEK SG  E       + S        TKRQRK+D PSR  +P  NI  S+  S S   
Sbjct: 62  VSEKNSGECEG----KKRDSDCLPIQRNTKRQRKVDNPSRYVIPATNIVTSNNASGSCSS 121

Query: 239 ------NIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQGT 298
                 +  +YC+N AC+A L +ED FC+RCSCCIC +YDDNKDPSLWL+CSSDPPF+G 
Sbjct: 122 VNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEGE 181

Query: 299 SCGLSCHLECALKHEKSGISKGQQVGVEG-TFYCLSCGKVNDLLGSWRKQLMKAKETRRV 358
           SCG SCHLECA   EKSG+ K +Q   EG  FYC+SCGK N LL  W+KQL  AKETRRV
Sbjct: 182 SCGFSCHLECAFNTEKSGLGKDKQ--SEGCCFYCVSCGKANSLLECWKKQLTIAKETRRV 241

Query: 359 DILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLTGVPVGTGRGIVNRLSSGP 418
           ++LCYR+ L +K+L    KY+++C +VDEAVK LEA+VGPLTG+P+  GRGIVNRL SGP
Sbjct: 242 EVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLTGLPMKMGRGIVNRLHSGP 301

Query: 419 EVQKLCTLAIDTLDSLLSKK---ILHQSPIS--IIQDTNLVATNLLRFEDVDATYLTVVM 478
           +VQKLC+ A+++L+++ +         SP S  + QDT    +  +RFEDV+AT LTVV+
Sbjct: 302 DVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDTATTGSTKIRFEDVNATSLTVVL 361

Query: 479 GTEDV-SSGKTVGYRLWHRKACDIDYPIEPTCILSQPNLRFVVRGLTPSSEYYFKAISFN 538
            + ++ S    V Y +WHRK  + DYP + TC L  PN RFVV GL P+SEY FK +S++
Sbjct: 362 ASNEIPSPPNIVHYSIWHRKVPEKDYPEKSTCTLFIPNTRFVVSGLAPASEYCFKVVSYS 421

Query: 539 GTGDMGMCEVQISTASAREDHPGCLVIERSQSSVTNVSEL-SNPSSVEDETNN--VMPCS 598
           GT +MG+ E+ + T SA E       +ERS S +TN S L SNPSSVE E+NN  ++P  
Sbjct: 422 GTREMGVDEINVLTRSAEEGANCSSAVERSVSPLTNCSTLSSNPSSVEAESNNDYIVPKK 481

Query: 599 DQTDSQTENYLSYCKDPNKIITANLSKDAINCTDVGGGETANDSVYLLDEKHVTKKSGML 658
             + ++  N  S  +   K +      D +        E   + + LLD++   ++  +L
Sbjct: 482 PSSKNEDNNSPSVDESAAKRMKRTTDSDIVQI------EKDVEQIVLLDDE---EQEAVL 541

Query: 659 PDPNVLKHEDKHSSEIHIIEDTSVNNGSNSAVVQEGTKCPPFVNSSGAGLPATPCKMEIL 718
                    DK  SE  ++  T    G+               NSS A LP TP + +  
Sbjct: 542 ---------DKTESETPVVVTTKSLVGNR--------------NSSDASLPITPFRSD-- 601

Query: 719 TDVLGRSGRSKSSATDREIGSEGDKLRRGSKSKKRSAEIRDADCTANGISDKDFEYYVKL 778
            ++  R  R + S  D                        + D +ANG ++   E+ VK+
Sbjct: 602 -EIKNRQARIEISMKD---------------------NCNNGDHSANGGTESGLEHCVKI 661

Query: 779 IRWLECEGHIDKNFRQKFLTWYSLSATSQEVRIVKAFVDNFIEDPSALAEQLVDTFSECI 837
           IR LEC GHIDKNFRQKFLTWYSL ATSQE+R+VK F+D FI+DP ALAEQL+DTF + +
Sbjct: 662 IRQLECSGHIDKNFRQKFLTWYSLRATSQEIRVVKIFIDTFIDDPMALAEQLIDTFDDRV 685

[Close]

BLAST of CmaCh11G003870 vs. TAIR 10
Match: AT4G30200.4 (vernalization5/VIN3-like )

HSP 1 Score: 496.1 bits (1276), Expect = 5.4e-140
Identity = 296/646 (45.82%), Postives = 392/646 (60.68%), Query Frame = 0


Query: 101 SLEGSFGAPLDPSKCSKTSMEEKRNLVYEISDQPH-ASELLQSWSRQEILEILCAEMGKE 160
           SL+G+ G   D SKCS+ S++EKR LVYE+S Q H A+E+LQ+WSRQEIL+ILCAEMGKE
Sbjct: 4   SLDGAAG---DSSKCSEMSVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGKE 63

Query: 161 RKYTGLTKLKIVENLLKIVSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQPSRLP 220
           RKYTGLTK+KI+E LLKIVSEK SG  E       + S        TKRQRK+D PSR  
Sbjct: 64  RKYTGLTKVKIIETLLKIVSEKNSGECEG----KKRDSDCLPIQRNTKRQRKVDNPSRYV 123

Query: 221 VPENNIPISSIRSDS---------NIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDN 280
           +P  NI  S+  S S         +  +YC+N AC+A L +ED FC+RCSCCIC +YDDN
Sbjct: 124 IPATNIVTSNNASGSCSSVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDN 183

Query: 281 KDPSLWLSCSSDPPFQGTSCGLSCHLECALKHEKSGISKGQQVGVEG-TFYCLSCGKVND 340
           KDPSLWL+CSSDPPF+G SCG SCHLECA   EKSG+ K +Q   EG  FYC+SCGK N 
Sbjct: 184 KDPSLWLTCSSDPPFEGESCGFSCHLECAFNTEKSGLGKDKQ--SEGCCFYCVSCGKANS 243

Query: 341 LLGSWRKQLMKAKETRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLT 400
           LL  W+KQL  AKETRRV++LCYR+ L +K+L    KY+++C +VDEAVK LEA+VGPLT
Sbjct: 244 LLECWKKQLTIAKETRRVEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLT 303

Query: 401 GVPVGTGRGIVNRLSSGPEVQKLCTLAIDTLDSL-----------------LSKKILHQS 460
           G+P+  GRGIVNRL SGP+VQKLC+ A+++L+++                 + +   +  
Sbjct: 304 GLPMKMGRGIVNRLHSGPDVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDCSYVL 363

Query: 461 PISIIQDTNLVATNLLRFEDVDATYLTVVMGTEDV-SSGKTVGYRLWHRKACDIDYPIEP 520
              I  DT    +  +RFEDV+AT LTVV+ + ++ S    V Y +WHRK  + DYP + 
Sbjct: 364 SNEISADTATTGSTKIRFEDVNATSLTVVLASNEIPSPPNIVHYSIWHRKVPEKDYPEKS 423

Query: 521 TCILSQPNLRFVVRGLTPSSEYYFKAISFNGTGDMGMCEVQISTASAREDHPGCLVIERS 580
           TC L  PN RFVV GL P+SEY FK +S++GT +MG+ E+ + T SA E       +ERS
Sbjct: 424 TCTLFIPNTRFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGANCSSAVERS 483

Query: 581 QSSVTNVSEL-SNPSSVEDETNN--VMPCSDQTDSQTENYLSYCKDPNKIITANLSKDAI 640
            S +TN S L SNPSSVE E+NN  ++P    + ++  N  S  +   K +      D +
Sbjct: 484 VSPLTNCSTLSSNPSSVEAESNNDYIVPKKPSSKNEDNNSPSVDESAAKRMKRTTDSDIV 543

Query: 641 NCTDVGGGETANDSVYLLDEKHVTKKSGMLPDPNVLKHEDKHSSEIHIIEDTSVNNGSNS 700
                   E   + + LLD++   ++  +L         DK  SE  ++  T    G+  
Sbjct: 544 QI------EKDVEQIVLLDDE---EQEAVL---------DKTESETPVVVTTKSLVGNR- 603

Query: 701 AVVQEGTKCPPFVNSSGAGLPATPCKMEILTDVLGRSGRSKSSATD 715
                        NSS A LP TP + +   ++  R  R + S  D
Sbjct: 604 -------------NSSDASLPITPFRSD---EIKNRQARIEISMKD 605

[Close]

BLAST of CmaCh11G003870 vs. TAIR 10
Match: AT5G57380.1 (Fibronectin type III domain-containing protein )

HSP 1 Score: 434.5 bits (1116), Expect = 1.9e-121
Identity = 289/751 (38.48%), Postives = 391/751 (52.06%), Query Frame = 0


Query: 96  PEYLRSLEGSFGAPLDPSKCSKTSMEEKRNLVYEISDQP-HASELLQSWSRQEILEILCA 155
           PE + S        ++  K +  ++ E+R L++ +S+QP  ASELL SWSR EI++I+CA
Sbjct: 18  PENMDSSSFEDNECIETCKPNVLNVSERRELIHALSNQPEEASELLNSWSRNEIMKIICA 77

Query: 156 EMGKERKYTGLTKLKIVENLLKIVSEKKSGSTENVADLDHQSSSPYLSPNITKRQRKIDQ 215
           EMGKERKYTGL K K++ENLL +VS            L   S S     N  K+++K+  
Sbjct: 78  EMGKERKYTGLNKPKLIENLLNLVSR----------PLGETSCSD--RRNSRKKEKKM-- 137

Query: 216 PSRLPVPENNIPISSIRSDSNIAVYCRNSACKATLNEEDKFCKRCSCCICYQYDDNKDPS 275
                                  + C N AC+A L  +D FC+RCSCCIC ++DDNKDPS
Sbjct: 138 -------------------IGYIICCENLACRAALGCDDTFCRRCSCCICQKFDDNKDPS 197

Query: 276 LWLSCSSDPPFQGTSCGLSCHLECALKHEKSGISKGQQVGVEGTFYCLSCGKVNDLLGSW 335
           LWL+C         +CG SCHLEC LK ++ GI       ++G FYC  CGK NDLLG W
Sbjct: 198 LWLTCD--------ACGSSCHLECGLKQDRYGIGSDD---LDGRFYCAYCGKDNDLLGCW 257

Query: 336 RKQLMKAKETRRVDILCYRISLAKKILSEGEKYQDVCRIVDEAVKKLEAEVGPLTGVPVG 395
           RKQ+  AKETRRVD+LCYR+SL +K+L    KY+++  ++DEAVKKLE +VGPL+G  + 
Sbjct: 258 RKQVKVAKETRRVDVLCYRLSLGQKLLRGTTKYRNLLELMDEAVKKLEGDVGPLSGWAMK 317

Query: 396 TGRGIVNRLSSGPEVQKLCTLAIDTLDSLLSKKILHQSPISIIQDTNLVATNLLRFEDVD 455
             RGIVNRLSSG  VQKLC+ A++ LD ++       SP   +       T  +R E++ 
Sbjct: 318 MARGIVNRLSSGVHVQKLCSQAMEALDKVV-------SPSESVSGQGDKMT--VRVEEIQ 377

Query: 456 ATYLTVVMGTEDVSS---GKTVGYRLWHRKACDIDYPIEPTCILSQPNLRFVVRGLTPSS 515
           A  +TV + +E+ SS    K  G+RL+ RK+ D +   +  C++  P     ++GL P +
Sbjct: 378 ARSVTVRVDSEEPSSSTQNKITGFRLFCRKSKDEECSSQGNCVVYLPETTSAIQGLEPDT 437

Query: 516 EYYFKAISFNGTGDMGMCEVQISTASAREDHPGCLVIERSQSSVTNVSE--LSNPSSVED 575
           E+  + +SFN  GD+   E++ +T     D  G       QS +TN S    SNPS  ED
Sbjct: 438 EFCLRVVSFNEEGDLDESELRFTTLKDDGDEAG-----DQQSPLTNSSSGLCSNPSLPED 497

Query: 576 ETNNV-MPCSDQTDSQTENYLSYCKDPNKIITANLSKDAINCTDVGGGETANDSVYLLDE 635
           E+NNV   CS                       N  KD  N      GE  ++   L +E
Sbjct: 498 ESNNVNKSCS---------------------KGNGDKD--NTEHCSAGEVESE---LEEE 557

Query: 636 KHVTKKSGMLPDPNVLKHEDKHSSEIHIIEDTSVNNGSNSAVVQEGTKCPPFVNSSGAGL 695
           + V +K+  +                                              G  L
Sbjct: 558 RLVKRKANKI---------------------------------------------DGRDL 617

Query: 696 PATPCKMEILTDVLGRSGRSKSSATDREIGSEGDKLRRGSKSKKRSAEIRDADCTANGIS 755
             TPCK +I     G + R KS                   S     EI +A   ANG+ 
Sbjct: 618 LVTPCKRDIYKGKQGGNKRFKSRTV----------------SLNEKPEINNA---ANGVG 620

Query: 756 DKDFEYYVKLIRWLECEGHIDKNFRQKFLTWYSLSATSQEVRIVKAFVDNFIEDPSALAE 815
           DKD  + VK IR LE EGHIDK+FR++FLTWYSL AT +EVR+VK FV+ F+ED S+L +
Sbjct: 678 DKDLGHIVKTIRCLEEEGHIDKSFRERFLTWYSLRATHREVRVVKIFVETFMEDLSSLGQ 620

Query: 816 QLVDTFSECISSKKTC---AVPAGFCMKLWH 837
           QLVDTFSE I SK++     VPAG C+KLWH
Sbjct: 738 QLVDTFSESILSKRSSTNGVVPAGICLKLWH 620

The following BLAST results are available for this feature:

BLAST of CmaCh11G003870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUM4	5.1e-175	46.39	VIN3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=VIL2 PE=1 SV=1	[more]
Q9FIE3	2.7e-120	38.48	Protein VERNALIZATION INSENSITIVE 3 OS=Arabidopsis thaliana OX=3702 GN=VIN3 PE=1...	[more]
Q5BPT4	3.5e-75	30.33	VIN3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=VIL3 PE=2 SV=1	[more]
Q9LHF5	8.6e-66	31.51	VIN3-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=VIL1 PE=1 SV=1	[more]

BLAST of CmaCh11G003870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30200.3	8.6e-178	47.51	vernalization5/VIN3-like	[more]
AT4G30200.2	3.6e-176	46.39	vernalization5/VIN3-like	[more]
AT4G30200.1	9.8e-174	47.45	vernalization5/VIN3-like	[more]
AT4G30200.4	5.4e-140	45.82	vernalization5/VIN3-like	[more]
AT5G57380.1	1.9e-121	38.48	Fibronectin type III domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032881	Oberon, PHD finger domain	PFAM	PF07227	PHD_Oberon	coord: 240..358 e-value: 3.7E-34 score: 117.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 709..732
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 561..580
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 704..732
None	No IPR available	PANTHER	PTHR46286:SF2	VIN3-LIKE PROTEIN 2-RELATED	coord: 108..836
None	No IPR available	CDD	cd15521	PHD_VIN3_plant	coord: 260..324 e-value: 1.07281E-24 score: 95.7318
IPR044514	Vernalization insensitive 3-like	PANTHER	PTHR46286	VIN3-LIKE PROTEIN 2-RELATED	coord: 108..836
IPR003961	Fibronectin type III	PROSITE	PS50853	FN3	coord: 443..541 score: 9.530969
IPR003961	Fibronectin type III	CDD	cd00063	FN3	coord: 448..525 e-value: 0.00234282 score: 35.9351
IPR036116	Fibronectin type III superfamily	SUPERFAMILY	49265	Fibronectin type III	coord: 449..524

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G003870.1	CmaCh11G003870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0040029	regulation of gene expression, epigenetic
biological_process	GO:0010048	vernalization response
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding