CmaCh11G003550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G003550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L7
Location	Cma_Chr11: 1754503 .. 1761866 (-)
RNA-Seq Expression	CmaCh11G003550
Synteny	CmaCh11G003550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGAAGCAGCAGTCTTCTTCAATGCGACGAGCGTATGACCCGAACCCTAACGACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACACCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTATTCTTCTTCATGCCGTGTCCCTCTTTTTGCAGCGCAATGGCTTCTCCAAAACCCTAAAAAAGTTTCGTTCCGAAGCGCAGATTGAGGTCAGTACTTCGAACTCTTGTTCTTCGCGGTTTCACCCACTGTGGGGGATGTGAAACTTTTTGGCTGTGGTGGTTCATATTAGTTTTATTCATTTGATGCCCATTATGGCGTCCAATCGATTGTTTTTAAAGAATGGGCTATTCATGGACTTCCTCGTCCAAAATGTTTGTTTTGTTCTAGATGAACTTGCTTACAGCATTCAAGTTTAATCATATTTTCGTGTTTTTATCGAACAAGCTTACTAAAATTAGTAATTAGCAATAATATCTTAATCCTCTCAAGTGCTGCAAAATTTTGCCCAGAGTTTCTATTTCTTGTATAATCAATTTAGTGTTGACATCTGGCTGCTGTTATCTATGTTGAAACAATTCCCTTTTCTGTTTCTATTCGTGCAGAAGGATTTTTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGGTAGGACTAGAGATTCTCTTGATTCTTGTTTGTTAAACTCAAAAGAAAAGTGACCATTTCTAATGCATTGATTTCTTTTGCCCGAATCTTATTTGATCTAGATACGAATTCATTCATCTAACTTAAAAGTTATAATATGCAGTACTCAAGCCATTGCAACTCAAAATAAACGAGGTATTCTCATATTGTCCACGATCTTTTAATTTATTTGTTTTTACAGTTTAGGAAACTTAGCTACAATTATTTTTAAAAATTTGCAATACGACATGAAATGATTGATTTTAATTGTGCATCTCTTCTTGGCTGGATTTGATCTAGTAGATGAAGAAACGGTGAAGGAGGGTTTGGGTGATAGGGCTCCTGGAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATTAAAAAGGCAGTTCCCGAAACTCTTGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGTTGCTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGTTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGAAACTTCGAATGAAAATGATGGTACCAAGACACCACATGAAGAAGAACACAACGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTCATACCGTTGATCAGAACGAAACTGAAGATATCAAACGTAGAAAATTAGAAAGTTCAAAGGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCGCAGCAGACGAATGAGTATGTTGAAAAAACTTCAGAGAAAACTTCTTCAAAGAAAGCTTTGAAAAAACATTCAAATTGCTCAGCAGAGGTATGTGTATATTGGCATCACGTAGGGGTCAAATTTCTTTATATGCAATAATCTTTTGATGATTTAACTATATTTTGGCATTGTAATATTCGATATTTAACTAGACATAGGGCCACCAATTATGTGAAAAACATAATAACTTAACTCCATGAGCATGCCAAATATCCCTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAGCATTCTTTATAAGAGTATGGAAAGCTCTCCCTAACAGACGCGTTTTTAAACCTTGAAGGGAAAGCCTAAAGAGGACAATATCTGTTAGTGGTGGGCTTGAATGGTTACAAATGGTATCAGAGCCAGATATTGCGCGGTGTGCTAGTGAGGACGTTGGCCCCCAAGGGGGGTGGATTTTGAGATCCCACATCGATTGGAGAGGGGAACAAAACATTCCTTATAAGGGTGTGAGGAACTCTCCCTAACATAAACATTTTAAAACCTCGAAGGGAAGCCTTTGAAGGGAAAGCCTAAAGAGGACAATATCTGCTAGCCGTCCGACGTGGACTTAGGCTATTACAATCCCACATATAGCTGCTCTTCTGCTTCTAAATGTCTTCTCTCCTTGAGTGGTGCCTATTTTCTATTTGCATATGGCAAGCATTTTGTGATTCTAGTAGCAGTTTGAAAAAGAGAAGGAAGTTGACTTGGTAATGGAATATCAATTTTTAGTATTGTTCATGCTCCCACCCCTATTCGGATCAAGGGCGAAAAGTCCTTGCCTTCGGCTTGGATTGAACTGTTTGATTAGGTAACCAAATGACTTTTCGAGATCGGAACGCTGTTCCGGGTACACCCATTTTAGTAGCAACAGTTGAAGGAATGGTCTTGATTTAAAGAAAATCCTATTTTTTTAGAACGAGTTGTTGAGACCATAGCATGTTACACGAAAGCGCCGCTTTCACTGTAGTCTTGTCACACAGCAGCCCGCCTAGAAGAGCCACTCGCTCTGTAGTGTTGTCACATAAGATAAGCACTAGCCCACCTGATGGCCGGGAGCCAAACCCCCCAGCTCATGTGCCAAAGTCAAACGGTTGTTCTTCCTTCCCCGCTCCCTCTTTTTCTAGATATGCGGTGGCGGGCGGAGCACTCTAGATGACCGGCAGCGGGTTACCATAGAAGAGGGGACAACTTCTTTCTCCCTTGCTCCATTTTCCTTTGATGATTGAAAGTAGCAAGCCACACCACTACTAGTTAGTACAGAGGCCAGATAGATAGAAGGTAGCTCATCCAGCCCAGCGCGGATATGATTCTGAATCAACAAGGGCAAAATGTAATATGTGATAGGAAGAAGATTTAGTTAATACCCATTGAATTCCACAAATTGTATTTGTTGCTAAAGATCAGTGAACATGAGGTAGTGGGGTCTTTTAAATTTCAATCCTTATCACTTTCACTTGATACAAGATCGACTGTGCTGAAAGATTGTATAATTGCAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCCGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGTGGGATTTGCTATATTATTGGCTTCTTGCCGCAATGCAGCTTGCTATCAGTAGGATCTTTTGTTTCTCATTTCTAATCTATCATATTGGGCCAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGCTCTCGGGCAGGTTAAAGGAAGGTATTTTTCCCTGACCCTTTTCTCTCTTAGTTCTAGCTTATAGTTTGTCTATGGTGTTTGGTAACTGCTGCTGATGTCCTAAAAGTTTGGATGTTAAATATTTTAAGTAAGAATGGTCGATGAGAAAACAAGAGAGATCCCACATTGATTGGGAAGAAGAACGAAACATTCTCTAGATGGGTATGGAAACCTATACTTAATAGATGCGTTTTAAAAACCTTGAGTGGAAAACTCAAAGAAGACAATATAATAATATTTACTAGTGGTGGGTTGGGCCGTTACACTTGACGTTTGTTATTGGGTTAAAACATTTTGTTGACTAAAATTTCCTCAATACATCTTGGTTCAAATTTATGTATTTCTCAGGGATTTTCGACACGAAAAGACCAAGAAGAAGCGTGGATCATATCGAGGTGGAGTTATTGATCTGCAATCTCACTCAGTAAAGTTCAATTATTCAGATGACGATTGATCATCATATTAATTGTTTCAGATTATGGTTCTTCACCTCTTCTTATCAATCATGAAGGAGGGAAGTTTCCATTTTATGAAAAAATAGTTGTAAGTTGCATAGAAACTGGAAAGGATTGATTGATGTTCTATAGAACATTATTTTTGGAAGGAATCCACCCAAAAGTTGGGCTATTGCCTTCACCGATCTTGAACTTATTATTGTTCTATTTTGTAGGTCTCCATAGTTTACATAATATAACTTATTATTGTTCTATTTTGTAGTCTCCAAATGCTCTATAGAGCAAAATTCTAGATGGACATTTGGTTTTCGAGGTTTGCGATTGATGTTATTTGGTCTCTAAACTTTGGCCTATTGGCCTACAGGTCGGAGAAGCACATTCAAATCTTAGATAATATTAAGACCCCATTTTTTTTATTATTATTAAGAATTTTTTAATTTATTTATCGAGTTATTAAATAATATCAACATATATCACACAGAGTTAAAATTATTATCATTTTTTTTACTAACACACATAATCTTTACAACAAAAACCAATTTTATACACCTAACTAACTTATACCATCTCTTAGAATTAGTTTGAAAAGACTTGGATCTTTTAAAATTAATCTATAAATACCGTTATTTATTTATTTATTTACTTATGTTTTGAAAAATCAAGCCAATTTTAAAGACAACAAATAATTGTCGGAAATTAACACTTTTGGGAAGAAATTTAATAAAGATATATATTTACACCAATATAAAATTTTACGTTTAAAGTAATATAATAGTTAATTTAGAATTTGATAGAAAGTTTAAAAGTATAAATTGATTTTTTTTTTAATTATTACAAAACTCTTAATATATACTTTTTTAAACAGATATCATGTAGGTTAAAACGCTTAAAACTTATGGCGACGGCGGGGATTGAATTTAAGTAGCTTAGGTGAATGTGGGCCGTCGATTATCCAGAGCTCGAAACAGAGGAACCTTACAAAACCCTAAAGCCTTCTCATTCTATGCGCTAAGAGCTCCGCAGCCGCGATCCCAACGTAGGAACTTCTGGAACACAAGTATGTTACTCTCTCTTCTTCCTTCTTCCTTCTCATCTCGTTTTCGCTATTGTTTCCCGTTGTTTTATTGTTCTATAGGAAGTACTCCAGTTTTCCTAGCTTTCGTAAGTTTTGTATTTCATGATTTCTTAGCATCTGTAGTAATCGCTAGGGTGATAAACGAGGAATGTAATGCGTTTCTTCTTACTTGAAGAATGAGTGCGGTGTTCTTTTTTATATCTTGTGTTATGTTTATTTGTTTTGTATTTGAGTTGGAAGTGTTAGGATTTCGATCTTACTGTATTTTCTTGGAAGTGTTAGGGTTTCGATCTTACTGTATTTTCTTTCTCTTTGCTGTACTACCGTTTACAGATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGAAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCTGCTAAGAAGAAGAATGTTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAGTATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTATGTAGATCCTGAGGCCAAACTTTTGTTTATCATCAGGATCCGAGGGTGAGTGATTTGGTTCGGAAGACCTTTTTTGATTGCTTGCTCGAATCCTGTTGTATCTTTCTTTTTTTTATGTATTGTTTTTGGATTTTCAGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGGTAACGAGTTTATCCATTGATCTCATCTCACACAAAAAGCTTTTGCAGACAATGTCTTCATATATATTCCTTTTGCAATTGGTTCTTTCTATCTTTTGCATGGACTGATTTTATACAATCTATGAAATTGGATTAACTGATAACCTGAAGAACAATTTTATAAGTTTCTTTTGCAATTGGACTGATCAGTTTCCTTGTCTGAGGTATTTATAAGTTTCTGAGTTAGGTGAGTAATTTTAGTAGGAATACGAGTATGAAAGAACAATAGATTTCTTTGCCTTTTTGCCATTTAATAACTGTTTGAAACATATACTTGTTTCCATTAAGAGTCATTGTTCTGTTATCGAATTCTTTTAGGTATTGTACTTCTCGAATGATTGTCTAAATCTTAAATAGTGAAGAAGATTGTGCTATTTCATGATGTTTTGAGTGCTAGCAATTATATTCATCCATTCTGTTGGCATGTTCGTAATGATTTGCATTTGTGTTTTTTTTACTCTTAGCTAACTCTGTGTATCATATCAATGCATTGTTTAAACATTTTGATGTTGATTCAAGATTGTTGTTGTTGTTTTATTTTGTTTCTTCCAAAGCACCTAGGAATGTTTATCTCGCATCTATTTTGCTTTGTTTTGTACCTCACTCCTTGCTTACCAAATCTGCAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGTTGCACAGAGTGGAGCCTTATGTCACTTATGGGTATGCTTCCCTTGGATTTCTTCTTTTGATTATCTAAAGTTCATAATTAACTCATTGATTTTCTGAACTGATACTTTCAGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCGTTGACTGACAACTCCATCATCGAGCAGGTTTGTTTCTCGGAGGAATTCTATATTAAGTTCTATGAAAGTTTAGCAGTTTGAAGTACCAATTGTTATTCACAACCTTCCATCCTTTATAACTGCTGTTGGGTGTTTGTTTGTTCAGGGTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAACTCATCAGAAGGATGAATTAAGATAGTTTTGAGTTTGTTCGTGGTGAGTTTCTGCTGGGAGCTGGGAAAATAGTTCCAATAGGTCTGTCATTTGAAGTTTGGTTCTTGGAATCTCATAATGTTTTGGTATTTCATTAGTGTACTTCGTCTATCTTCGGAATTTTTATCTTTGAGAATGATTTAAATTTTGGTTATATCAATCAGAGATTTTTCTAAAATTTCGGTTCTACCCGTTTCTAGTTGATGCCTGTAGTTTCATGTTCTTGATTTGCACTCTGTTTACCTTTTTCCGGGCTGAGATTTTCACTTCCCTTCTATCGTGAGGTGTCCACGTCTTTTGTAGTTTGTAACGTATTGATACGCGAGAGGGTAAATTATGGCTGTTGCAATTCATTCTTAAACTCCTATGAAGTTCGAG

mRNA sequence

CGGGGAAGCAGCAGTCTTCTTCAATGCGACGAGCGTATGACCCGAACCCTAACGACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACACCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTATTCTTCTTCATGCCGTGTCCCTCTTTTTGCAGCGCAATGGCTTCTCCAAAACCCTAAAAAAGTTTCGTTCCGAAGCGCAGATTGAGAAGGATTTTTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCAACTCAAAATAAACGAGTAGATGAAGAAACGGTGAAGGAGGGTTTGGGTGATAGGGCTCCTGGAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATTAAAAAGGCAGTTCCCGAAACTCTTGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGTTGCTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGTTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGAAACTTCGAATGAAAATGATGGTACCAAGACACCACATGAAGAAGAACACAACGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTCATACCGTTGATCAGAACGAAACTGAAGATATCAAACGTAGAAAATTAGAAAGTTCAAAGGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCGCAGCAGACGAATGAGTATGTTGAAAAAACTTCAGAGAAAACTTCTTCAAAGAAAGCTTTGAAAAAACATTCAAATTGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCCGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGCTCTCGGGCAGGTTAAAGGAAGAGCTCGAAACAGAGGAACCTTACAAAACCCTAAAGCCTTCTCATTCTATGCGCTAAGAGCTCCGCAGCCGCGATCCCAACGTAGGAACTTCTGGAACACAAATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGAAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCTGCTAAGAAGAAGAATGTTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAGTATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTATGTAGATCCTGAGGCCAAACTTTTGTTTATCATCAGGATCCGAGGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGTTGCACAGAGTGGAGCCTTATGTCACTTATGGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCGTTGACTGACAACTCCATCATCGAGCAGGGTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAACTCATCAGAAGGATGAATTAAGATAGTTTTGAGTTTGTTCGTGGTGAGTTTCTGCTGGGAGCTGGGAAAATAGTTCCAATAGGTCTGTCATTTGAAGTTTGGTTCTTGGAATCTCATAATGTTTTGGTATTTCATTAGTGTACTTCGTCTATCTTCGGAATTTTTATCTTTGAGAATGATTTAAATTTTGGTTATATCAATCAGAGATTTTTCTAAAATTTCGGTTCTACCCGTTTCTAGTTGATGCCTGTAGTTTCATGTTCTTGATTTGCACTCTGTTTACCTTTTTCCGGGCTGAGATTTTCACTTCCCTTCTATCGTGAGGTGTCCACGTCTTTTGTAGTTTGTAACGTATTGATACGCGAGAGGGTAAATTATGGCTGTTGCAATTCATTCTTAAACTCCTATGAAGTTCGAG

Coding sequence (CDS)

ATGACCCGAACCCTAACGACCTCTGTAAGTCCTTCTCTTCTCGCATTCAAACCTCGCCAAGTTCTTCTCTCACACCACACCACGAAGAAAGCAAACGACATTGAAGCCCCCATGTCTGCCATTAAAGCCGTATCTCTAGACCCAGAGCAGAGGACTATTCTTCTTCATGCCGTGTCCCTCTTTTTGCAGCGCAATGGCTTCTCCAAAACCCTAAAAAAGTTTCGTTCCGAAGCGCAGATTGAGAAGGATTTTTCAAAGGATTTGTCGCTCAGTCTCGAAGAAATGTGCCATATGCATTTAAAGAAATGTACTCAAGCCATTGCAACTCAAAATAAACGAGTAGATGAAGAAACGGTGAAGGAGGGTTTGGGTGATAGGGCTCCTGGAGCACAAGAGGAGCCCACAAAGAAGTCCAAGGATAAAAAGAAAATTAAAAAGGCAGTTCCCGAAACTCTTGTTGATATTGCAGAAAATGAGAAATCCGATTCTGTCCAAGAGGAGGCTCGAAAGAAATCTAAGGATAAAAAGAAAAAGAAAAACAAAGAGAATGTTGCTACTCTTGAAGAAAATGTTGTCAAGTCCAAAAAAAAGAAGAAAAAGGATGTTCGACTTCTAAGTGATGAAAATTCAAACCAGCTCATGACTAGATGTTCAGAGGAAACTTCGAATGAAAATGATGGTACCAAGACACCACATGAAGAAGAACACAACGACAAGTCGAAGAAAAGGAAAAGGTTGGCTTCTGAAGATCTTGACAGTCATACCGTTGATCAGAACGAAACTGAAGATATCAAACGTAGAAAATTAGAAAGTTCAAAGGGATGTAATGATGGTGTACAGTCTACAAAGGTCAATACAAGCAATGAGCTTTCGCAGCAGACGAATGAGTATGTTGAAAAAACTTCAGAGAAAACTTCTTCAAAGAAAGCTTTGAAAAAACATTCAAATTGCTCAGCAGAGCCAAAGACCATTAATGCATTTCAAAGGGTGAAAGTAGATGCCGTGACATTTTCTGACGAGAAACTTGCAGATAATTCTTACTGGGCGAAGGGTGGGGCAGAAACTGGGTATGGTGCAAAAGCTCAAGAAGCTCTCGGGCAGGTTAAAGGAAGAGCTCGAAACAGAGGAACCTTACAAAACCCTAAAGCCTTCTCATTCTATGCGCTAAGAGCTCCGCAGCCGCGATCCCAACGTAGGAACTTCTGGAACACAAATATGAGTAGCGAAGGAGTCAAGGGAGGCCCGGTTGTTCCGGAGTCCGTGTTGAAGAAGCGAAAGAGGAACGAGGAATGGGCTCTGGCTGAGAAGAAAGGTCTAGAGGCTGCTAAGAAGAAGAATGTTGAGAACCGGAAGTTGATCTTTAACAGGGCTAAACTCTATGCAAAGGAGTATGATGAGCAGCAGAAAGAGTTGGTTCGCTTGAAGCGCGAGGCTAGACTCAAGGGAGGATTTTATGTAGATCCTGAGGCCAAACTTTTGTTTATCATCAGGATCCGAGGTATCAATGCTATTGACCCCAAGACCAAGAAGATTCTTCAGCTTCTGCGTTTGAGACAGATTTTCAATGGTGTCTTTTTGAAAGTGAACAAGGCAACATTGAACATGTTGCACAGAGTGGAGCCTTATGTCACTTATGGCTATCCAAATTTGAAGAGCGTGAAAGAACTGATTTACAAGAGAGGCTTTGGAAAACTCAACAAGCGAAGAACTCCGTTGACTGACAACTCCATCATCGAGCAGGGTCTTGGCAAGTTCGGAATTATTTGTGCAGAAGACCTCATCCACGAGATTTTGACAGTGGGACCCCATTTCAAGGAGGCCAACAATTTCCTCTGGCCATTCAAACTGAAAGCTCCCCTTGGTGGTTTGAAGAAGAAGAGAAATCATTATGTTGAAGGAGGTGACGCTGGAAACCGTGAAAACTACATCAATGAACTCATCAGAAGGATGAATTAA

Protein sequence

MTRTLTTSVSPSLLAFKPRQVLLSHHTTKKANDIEAPMSAIKAVSLDPEQRTILLHAVSLFLQRNGFSKTLKKFRSEAQIEKDFSKDLSLSLEEMCHMHLKKCTQAIATQNKRVDEETVKEGLGDRAPGAQEEPTKKSKDKKKIKKAVPETLVDIAENEKSDSVQEEARKKSKDKKKKKNKENVATLEENVVKSKKKKKKDVRLLSDENSNQLMTRCSEETSNENDGTKTPHEEEHNDKSKKRKRLASEDLDSHTVDQNETEDIKRRKLESSKGCNDGVQSTKVNTSNELSQQTNEYVEKTSEKTSSKKALKKHSNCSAEPKTINAFQRVKVDAVTFSDEKLADNSYWAKGGAETGYGAKAQEALGQVKGRARNRGTLQNPKAFSFYALRAPQPRSQRRNFWNTNMSSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN

Homology

[Close]

BLAST of CmaCh11G003550 vs. ExPASy Swiss-Prot
Match: Q9LHP1 (60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.9e-116
Identity = 206/236 (87.29%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 416 VVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKELVRLK 475
           VVPESVLKKRKR EEWALA+K+ LEAAKK+N E RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 476 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 535
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINM 128

Query: 536 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIH 595
           L RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RT LTDNSI++QGLGK GIIC EDLIH
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIH 188

Query: 596 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 652
           EI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 189 EIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of CmaCh11G003550 vs. ExPASy Swiss-Prot
Match: P60040 (60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.7e-114
Identity = 206/241 (85.48%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 411 VKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKE 470
           V+   VVPESVLKKRKR EEWAL +K+ +EAAKKKN ENRKLIF RA+ Y+KEY E++KE
Sbjct: 2   VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61

Query: 471 LVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 530
           L+ LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK
Sbjct: 62  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 121

Query: 531 ATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICA 590
           AT+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN +R  LTDNSI+EQ LGK GIIC 
Sbjct: 122 ATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICT 181

Query: 591 EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM 650
           EDLIHEILTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRM
Sbjct: 182 EDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRM 241

Query: 651 N 652
           N
Sbjct: 242 N 242

[Close]

BLAST of CmaCh11G003550 vs. ExPASy Swiss-Prot
Match: P60039 (60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.4e-111
Identity = 202/236 (85.59%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 416 VVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKELVRLK 475
           VVPESVLKK KR EEWALA+K    AAKKK+VE RKLIF RA+ YAKEY E+  EL+RLK
Sbjct: 7   VVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLK 66

Query: 476 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 535
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 126

Query: 536 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIH 595
           L RVEPYVTYGYPNLKSVKELIYKRG+GKLN +R  LTDNSI++Q LGK GIIC EDLIH
Sbjct: 127 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIH 186

Query: 596 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 652
           EI+TVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 187 EIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

[Close]

BLAST of CmaCh11G003550 vs. ExPASy Swiss-Prot
Match: Q58DT1 (60S ribosomal protein L7 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-79
Identity = 149/245 (60.82%), Postives = 181/245 (73.88%), Query Frame = 0


Query: 407 SSEGVKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDE 466
           + E  K  P VPE++ KKRK   E  +   +   A K      RKLI+ +AK Y KEY +
Sbjct: 4   AEEKKKKVPAVPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQ 63

Query: 467 QQKELVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFL 526
             +  +R+ R AR  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+
Sbjct: 64  MYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFV 123

Query: 527 KVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFG 586
           K+NKA++NML  VEPY+ +GYPNLKSV ELIYKRG+GK+NK+R  LTDN++I + LGK+G
Sbjct: 124 KLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNALIARSLGKYG 183

Query: 587 IICAEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINEL 646
           IIC EDLIHEI TVG  FKEANNFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN L
Sbjct: 184 IICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRL 243

Query: 647 IRRMN 652
           IRRMN
Sbjct: 244 IRRMN 248

[Close]

BLAST of CmaCh11G003550 vs. ExPASy Swiss-Prot
Match: P14148 (60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2)

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-79
Identity = 148/237 (62.45%), Postives = 178/237 (75.11%), Query Frame = 0


Query: 415 PVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKELVRL 474
           P VPE++ KKR+   E  +   +   A K      RKLI+ +AK Y KEY +  +  +R+
Sbjct: 34  PAVPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRM 93

Query: 475 KREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLN 534
            R AR  G FYV  E KL F+IRIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++N
Sbjct: 94  ARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASIN 153

Query: 535 MLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLI 594
           ML  VEPY+ +GYPNLKSV ELIYKRG+GK+NK+R  LTDNS+I + LGKFGIIC EDLI
Sbjct: 154 MLRIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRIALTDNSLIARSLGKFGIICMEDLI 213

Query: 595 HEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 652
           HEI TVG  FKEANNFLWPFKL +P GG+KKK  H+VEGGDAGNRE+ IN LIRRMN
Sbjct: 214 HEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNREDQINRLIRRMN 270

[Close]

BLAST of CmaCh11G003550 vs. TAIR 10
Match: AT3G13580.3 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 421.4 bits (1082), Expect = 1.3e-117
Identity = 206/236 (87.29%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 416 VVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKELVRLK 475
           VVPESVLKKRKR EEWALA+K+ LEAAKK+N E RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 476 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 535
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINM 128

Query: 536 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIH 595
           L RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RT LTDNSI++QGLGK GIIC EDLIH
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIH 188

Query: 596 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 652
           EI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 189 EIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of CmaCh11G003550 vs. TAIR 10
Match: AT3G13580.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 421.4 bits (1082), Expect = 1.3e-117
Identity = 206/236 (87.29%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 416 VVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKELVRLK 475
           VVPESVLKKRKR EEWALA+K+ LEAAKK+N E RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 476 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 535
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINM 128

Query: 536 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIH 595
           L RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RT LTDNSI++QGLGK GIIC EDLIH
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIH 188

Query: 596 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 652
           EI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 189 EIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of CmaCh11G003550 vs. TAIR 10
Match: AT3G13580.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 421.4 bits (1082), Expect = 1.3e-117
Identity = 206/236 (87.29%), Postives = 225/236 (95.34%), Query Frame = 0


Query: 416 VVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKELVRLK 475
           VVPESVLKKRKR EEWALA+K+ LEAAKK+N E RKLIFNRAK Y+KEY E+++EL++LK
Sbjct: 9   VVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLK 68

Query: 476 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 535
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 69  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINM 128

Query: 536 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIH 595
           L RVEPYVTYGYPNLKSVKELIYKRGFGKLN +RT LTDNSI++QGLGK GIIC EDLIH
Sbjct: 129 LRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIH 188

Query: 596 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 652
           EI+TVGPHFKEANNFLWPF+LKAPLGG+KKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 189 EIMTVGPHFKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of CmaCh11G003550 vs. TAIR 10
Match: AT2G01250.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 414.8 bits (1065), Expect = 1.2e-115
Identity = 206/241 (85.48%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 411 VKGGPVVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKE 470
           V+   VVPESVLKKRKR EEWAL +K+ +EAAKKKN ENRKLIF RA+ Y+KEY E++KE
Sbjct: 2   VESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKE 61

Query: 471 LVRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 530
           L+ LKREA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK
Sbjct: 62  LISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNK 121

Query: 531 ATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICA 590
           AT+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN +R  LTDNSI+EQ LGK GIIC 
Sbjct: 122 ATMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICT 181

Query: 591 EDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRM 650
           EDLIHEILTVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INELIRRM
Sbjct: 182 EDLIHEILTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRM 241

Query: 651 N 652
           N
Sbjct: 242 N 242

[Close]

BLAST of CmaCh11G003550 vs. TAIR 10
Match: AT2G44120.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 404.4 bits (1038), Expect = 1.7e-112
Identity = 202/236 (85.59%), Postives = 217/236 (91.95%), Query Frame = 0


Query: 416 VVPESVLKKRKRNEEWALAEKKGLEAAKKKNVENRKLIFNRAKLYAKEYDEQQKELVRLK 475
           VVPESVLKK KR EEWALA+K    AAKKK+VE RKLIF RA+ YAKEY E+  EL+RLK
Sbjct: 7   VVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLK 66

Query: 476 REARLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATLNM 535
           REA+LKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKAT+NM
Sbjct: 67  REAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNM 126

Query: 536 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKRRTPLTDNSIIEQGLGKFGIICAEDLIH 595
           L RVEPYVTYGYPNLKSVKELIYKRG+GKLN +R  LTDNSI++Q LGK GIIC EDLIH
Sbjct: 127 LRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIH 186

Query: 596 EILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 652
           EI+TVGPHFKEANNFLWPF+LKAPLGGLKKKRNHYVEGGDAGNREN+INEL+RRMN
Sbjct: 187 EIMTVGPHFKEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

The following BLAST results are available for this feature:

BLAST of CmaCh11G003550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHP1	1.9e-116	87.29	60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1	[more]
P60040	1.7e-114	85.48	60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1	[more]
P60039	2.4e-111	85.59	60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1	[more]
Q58DT1	1.8e-79	60.82	60S ribosomal protein L7 OS=Bos taurus OX=9913 GN=RPL7 PE=2 SV=1	[more]
P14148	1.8e-79	62.45	60S ribosomal protein L7 OS=Mus musculus OX=10090 GN=Rpl7 PE=1 SV=2	[more]

BLAST of CmaCh11G003550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13580.3	1.3e-117	87.29	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.2	1.3e-117	87.29	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.1	1.3e-117	87.29	Ribosomal protein L30/L7 family protein	[more]
AT2G01250.1	1.2e-115	85.48	Ribosomal protein L30/L7 family protein	[more]
AT2G44120.1	1.7e-112	85.59	Ribosomal protein L30/L7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 457..481
None	No IPR available	COILS	Coil	Coil	coord: 170..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..206
None	No IPR available	PANTHER	PTHR11524:SF47	60S RIBOSOMAL PROTEIN L7-RELATED	coord: 397..651
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 50..82 e-value: 4.3E-4 score: 29.6
IPR006594	LIS1 homology motif	PROSITE	PS50896	LISH	coord: 50..82 score: 9.685019
IPR012988	Ribosomal protein L30, N-terminal	PFAM	PF08079	Ribosomal_L30_N	coord: 417..488 e-value: 3.3E-24 score: 84.9
IPR007718	Srp40, C-terminal	PFAM	PF05022	SRP40_C	coord: 327..371 e-value: 2.8E-9 score: 37.7
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	GENE3D	3.30.1390.20		coord: 492..651 e-value: 1.4E-32 score: 114.2
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	SUPERFAMILY	55129	Ribosomal protein L30p/L7e	coord: 492..651
IPR005998	Ribosomal protein L7, eukaryotic	TIGRFAM	TIGR01310	TIGR01310	coord: 418..651 e-value: 3.2E-99 score: 329.2
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	PFAM	PF00327	Ribosomal_L30	coord: 493..543 e-value: 3.1E-19 score: 68.6
IPR039699	Ribosomal protein L7/L30	PANTHER	PTHR11524	60S RIBOSOMAL PROTEIN L7	coord: 397..651
IPR018038	Ribosomal protein L30, conserved site	PROSITE	PS00634	RIBOSOMAL_L30	coord: 511..543
IPR035808	Ribosomal protein L7, eukaryotic/archaeal	CDD	cd01657	Ribosomal_L7_archeal_euk	coord: 492..651 e-value: 3.43348E-89 score: 272.478

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G003550.1	CmaCh11G003550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome