CmaCh11G003200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G003200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Outer arm dynein light chain 1 protein
Location	Cma_Chr11: 1587033 .. 1601317 (+)
RNA-Seq Expression	CmaCh11G003200
Synteny	CmaCh11G003200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGAGCTATGAACCAATCATTCCTTGGTGCACCTTCATGACTGATTTCAGCCACCATTCTTCCGCCTTAAAATTGCTTTCGTTTTGATCGCCAATTTCTGTAATCTCAAGAGCTTTGAGCCGTAATCACTCTTCTACTTGTACGTGAAAAGAAGTTTCAATCCTTGATTGATAAACCAGCCAATTGCCGCCGGTATGGTACTGCTTCATATCATCTATGTCTCCTCCTCTATACACTTTCAATTTTGATGCTCGAAACTTCTAGGTTTTTGTTAATCGCTGATTTCTGTAAGGTTTTCATTTGGAGAATCTAGTAGAGATGGCTGTTTTTACACATGGAATCCCCAATTCCCGAATCTTCTGCGAAAGAGAGGGAACCTTGTTTTTAGGTTTTTCGGCTGCTCCAGTCTTGCCACAGAGGGCGAGAGTTTACCGACATTTTGCCAGAGGTTAGTCAATTTTAATGGTCTTGTTCTTGAAGAAGTAATAGTCGTGGATTGTTTCTTGGAATTATGAACTGGTTAGGTTGCTAGTTTTTGGCGTGATAATTGGAAATCTTGAGCTATGTTGAACTGACAGTGCACAATTTGCTGATTGTTTATTGTGAAAGCTTTAAAAGATACCACAAATTATAGTATGAATTTAAAGCATTAACCCAAGTTGGTGGAAAACTAATGGTGAATAAAACAGATTGTTCGTCAATGTCTCTTCACAATGATAACTCCCAATAGGCTCTGTTTAAATCCACTTTGGTTGAGGACCAGCAACGTGTTTACTCAACAAAAGCTCGTCCCCTTGCAGAAGTGCTATTTTCTTATGGAAATGATTTTGATTTTGTCCACTTTTGACCGGTTATGTAGTTTAGAAACTCAGTGCATTCCCCTAAATTTGACAAGAATTTACATCAGGTGGTTGTTATATATTTTTTTTCAGAGAGAGGAAGTAGTCAAAGGTTGTCAAAAAAGGAACCTATTGATTTCCCAACGAAAGGATTCTTTGGCACAAAGAAAGTTGTCCTCACTGTCCCTAGGGACAGTAGCTCTTCAAACGCCAGCAGCAGCGAGGATGATCCGACAAATCAATCCAAGGTAAGGCAACTACCAGACATGATTATATTATCTGCTTCTTGAGTAGATGGTAGATGCATTTATAGAATGCTTCTAAGAGAAGATTTCAGCTGATTTCCTCGAAATGTATGCAGTCCACAAAAACAAAAGTGAACAATGCTTTACTGGGAATTGAAATCTCAGTTAGTATCACCTGATGGCATGATAATATAATGACATACATTACATGTGCATGTCCGTAAACAAGTGAAGTAGCTTCTTACTAATAGGCAGCGTTGGTTTGAGGACTTGGACAAAGTTTAAACGAAAATGTTTCCAATAAATGTTAGATGAAGGCACAGCCTAAGATGACATTTCTATGACCTTATGTGCTTTATCAATGCAATGCATGATGAAATGTTACTAACAAAAGAATGTTTGGTTTCTCATTTATCTAATATAACCTTATAGCTCTCCATATCGAGTATTATCAGGAATAACAAATGAGATTTTTTCACTCTTTTTTTTTTTCTGCAGCAAACACCTTTTGGTTACACAAGGAAGGATGTTCTATTAATTGGATTGGGTGTCACAGTTCTTGGATTTGGGTTGAAAAGTGGATTAGAGGTAAGATCTTTCACTTTTCCTTTAATAGCTGATTGTTTCTCACCCTCTCTTCTATACTTGGTCAATTTTCCGGCCATTTTTCCTACTGTAAACTGAGGAGAAAAACTTTAGAGTTGTTCTTTTATTCAAAATTTATATTGTTCGGTCACTCTTCTTCGTCTACCGTGTGCAATTTATATTGTTCTGTCCTGATGTCTCGTGCAGTTTGCTGGGTTTGATCCTATGCAAGCAGGTAACGTGGTTCAGCTTGTACTGGTTTTGGGTTTAACGCTTGCATGGATTTCCACATATATGTTTAGAGTTTCAAATAAGGATATGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGGAGGTATGGTATGATATAAAACGACAATCAATGGACTTTTTTCAGGATTATCACGTTTGAGAGTGATTTAAGCCATTTGTAGAATGCCCTTTTAACTAAAGTTCTCTTTTCCTCTTGAAAGGCAATTTTGTTTTGATTTTCCAATGCCTTTCTTACCAACCTCCCTAACAATTCACTGTCTGTAGAAACGCCTGGAGAGCCTTACCGAAGCAGAGCTCGTAGCATTGCTCGAACAAGTCGAGGAAGAGAAAAGCCAATCAGCGAGTGGCGAACAGGTAAATTGAAGTCATTTTTATCCTTATTTATTACAACTGCTCGAGCTTGGCCTTGTGCATATGCATATGCTATTCTATATGGGCAATGTAGAATTAGTTTCTGTTACTTAAACACTACATTTTAGATAGCAATAACAAAATACGTACCCATTAATAAATTAGTTAAGCTATAAGCTTAGTTTAATTCTATAACCCGTTCCCCATTTATAGCTATTTGTAGCCAATTTGCTTCTATTATTGTTTGTTTCATTAAATTATGTTTAAACTCAGTTTGTATGTATTTTGTTCATGAACTTTTAATCACCTAAGATTAGGTCTAATATTTGAATTTTATGCCAATAGGATCATATACTTTAAATTTTGTATTGAATAGGTACATGAATTTTAAAAAAAATGCAAATAGGTCGAGGTTCTAATACATAAATTGAAAATTCAGAAACCTATTAAATACAAAATTAAAAGTTTAAAAACTTACCGATTTAAACGCAAATGATTAAATGAATCCTTTTTAAAGATGTTGGATGACCCAAGGAGTGGTGGGAGACAACTCAGTTGTCAATAATCTCTGTTTTTTTTAATTTAATTGGTGATCCGAAAATAGAAAAAAAAAAAACCAATAATCACAAAACCAAATCTAAGTTGGTCTTTGAAACTCAGTTGTATATTTAGCTTAGACTTAAATGTTATGTACATATTTTAAATTTTTATATTTGCATAAAAGCTAATGATTCTTTTTCATTAAAAAGTTACCAAAACAAAAATATTTTTAATATAGCTTTAATAGTAAAATGAATTTTAACCTCTTATTTGTTCATCGTTAAATAAAACCGTCAATATATTGAATAAATATCTAAAAAAGATTATTATTATTTTATTCTTGGTATAATGACGTATGAAGTTATATATATATATATATATATATTTGCATGTATATATGTATGCAGTAGCAGTTTTTTTTTTTGTCTTCATGCGACAGACGATTATTGTTATTATTTCAAGAAAAAAAATTAAAATCATTATTGTCATTATTACCATTAATTTTTTCCGGATAATGACAAAAAATTAACTCCACCTACCGACCCGGTCCCGGAGGATTCTTCTCCGCTAAGGATTTACGTTTGAACGGTTCGACCACGCAAGGACTACGCGTCACTGACCGGTCCATTTGAACCGGAACCTCGGCCCCCATGGACTCCAGGATCCAGTGCATGCGGGCCACGTGTCACATTAGTGCCACGTAATGTTTTATTATTCTATTTTTTTTATCCGAATTACACATTTACGCCCAGACATTCTTTGTTTTATCATTCTATAGGAACAAAATCTAACCTTTGCCTGAATTTTTAAAAACGCAAAACTAAAATATAAAAAAAAAAGAAAAAAAAAAAAAGAAAAGAGGAGAGAAAAAATGTTTAAAAAGGAAAATAAAAAACCTATCCGATGCTGACACCTGTCGTCTTCTTCGGGAGAATTGAAGTTTTTATTTTTTATTTTCTTTTTCACTCGATCTCTTCGTGGTGAGGCCATGGCCGTTTTACTCTGTAACATTTTTCTCCCCGCGAAAGTTACTTGGATGAATCTTTTGCTCTTTCTTCCATGTTTTTGTCTTCTGTAATTTCTCTCTCTAGAGTTTTTTTCTCTCTCTTCAGGACCGAATTTCTTAGTTTCCAATTCGTTCCCTTCATTTCGGAATACGGACGTTGTCTATGGTTGCTACATGGAATTTAGTTCGTATCAATGGTGATAGACAAACCCTAATTCGGCCATTGAGATGGCAATTGTTACCGGAGATCGATATTTGGAGAAGTTGGTGAAGTTTGTGGAGGAACACGCCGATCCTCTGATTGAAGGAACTTCGGTGTTGAAGCTAAATCCAGCGGGATTGCACTATGTGCAGTCGAGGTTGGAGGCCTTACATGAACTCGAGAGTCTTTTAACCGGAGCTCCAGTTGACTACCTTCGCGCTTATGTCTCCGACCTTGGCGACCACCGCGCGCTTGAGCAGCTCCGACGAATTCTGAGACTGCTCACATCTCTGAAGGTCGTTTCGGTGCTTCCGCAGCCGTTGCGAGACCCGACACCGCTGTCTCTGTTGCCGTTTGGAAGTCTGAAGGTTTTGGAGCTCAGAGGATGCGATTTGTCGACCTCGGCGGCGAGAGGATTGCTGGAGTTGAGGCAAACCTTGGAGAAGATCATTTGTCACAATTCTACTGTACGTATTGAATTAATTGCTGCACAAAAAATTGAGCCATACGCTTTTGTAGTAGTACTTTTAACTCCTTATTCTATGTAGTTGATTGAGATTTCTTATACGGATGTTTTTTTAAAAAAATTATTTAGGATGCTCTGCGGCATGTGTTTGCAAGTAGGATTGTGGAGGTTAAGAATTCTGCACAATGGAGCCGATTGTCATTTGTTTCATGTGCGTGCAATGGCTTAGTTCTCATGGACGAGTCTTTGCAACTTCTACCTGCTGTTGAAACCCTTGATCTGAGCCGAAATAAGTTTGCAAAAGTGGACAATCTTCGCAAGTGTGTGAAACTGAAACATTTGGATCTTGGTTTTAATCATCTAAGGACAGTTGCCTCTTTTACTGAGGTATGTACTTCAAATAGTCCCGTCGCCGTTTTTCTTTAGGCCACTTTGTGTACTTCCTGTATAATGTTTTGAAAGTAAGTATGATGCTTTTCGGAAAAAAAAAAAAAAAAAAAAATTGGCCGCAGATTAGCTCTTTATTGCCATATGTTGATTCTATATTAAAATTTGACTGTTCTTGATGGTTGTTTGATTATAAATTTTTTTGTTCAAGTACGCAAAAAAGTAGGAAATGTTACCTCCATCTGAAACGGAAGAAACTTTGTTATCTTCCTTGCTGCTAAACGTATACTTTTCTCTTATAAGCTTACCGTGACTTATAAAGTGAGTTAGAGAATACAGAGAATGAAATTATTTGGATGGTTTTTATGTAATAAAAGATTTACGAAATAACTACAAAACCTCATGAAAAGACGAAGTCTTGTCTGATTTAATGACTATAGTCACAGAACTCGCCACTTTACTGTGGTCAATCACCGTTATTAATAGTTCACCGGAGCAGGCTTTTTCCTTCCTAGTAAGCTACCTTACTGATGTTGTTCGTTAAAATTTCTAATGCGTTGTGAAGATGGAGAAAAGCTATTCTTCTCTTAATTCTTTTTGAGTGCTAGCAGTATCTAACTCGTAAGATGAATATTCTAAGATTTGAACTCCAGGTATATATTTCAAACTGTGTTGAGAGCTTTTTTGTTTCTTTGGATGTTTTAACGTCTTCAAATTATCAATTTGTAGCATTTGTTGAATATTTGTGGTTTTAATTCTTTATATTATGGCCTTACCTTGGATTTATTGCTTAATCTTAAAATTTAATGGATTTTACCCCCAATATGTTAGGCTTATTAATTTGATCTTGATTTTCTTTCGACCTTAAATACAAAAATTTATCATTATTTTTATTCCGAGCCAATGTGAATCTCTATTTTGAAGCTGCCGTATTCGAAACATCATCTTTCTGCTTCAAGTTGTTGATTTAGGTGTAGTTTTGGACCCATACACAATATTGTTGGAAAATGCAGGTCCCGTCGAATCTAATTAAACTTGTTTTGAGGAACAATGCTCTAACTACATTGCGTGGGATTGAGAATTTGAAGTCACTTGAAGGGCTTGACGTGTCCTACAATATAATTTCCAATTTTTCAGAGTTGGAGTTCCTTGTGGATATTACATCTTTACAGAATTTATGGCTAGAGGGAAATCCCTTGTGTTGTGCCCGGTGGTACAGAGCACATGTGTTCAGCCTTTTCTCTTATCCGGATAACGTTGGTTTTCTTTCCTTCATCAATTTCTTTTTTCCTTTTTAATTCAGTTTTTAAATTTTACTGTCATTGCTAGCAAGCAAAAGTTTTTAACGTTGGTTTCTTTTTTCCTTCATCTTAGTTTGATCTTGTTTCTTTTGTTTATGGTTTATTAGCTGAAGTTAGATGACAAGGGAATCTGCAAAAGAGAATATTGGAAGAGGAAAATTATCATTGCTAGCAGGCAAAAGCGACCTGCCAGTTTTGGATTTTATTCCCCTGCAAAAGATGGTGCGCAAGGAGAGGGAAGCATAAACAGGAAAAAGGTAAATGGTTGCTGTAATTTAAGGATAGGCCACTGCATGATGCATTTAAATCAGAACGTTCTATATTAGAACAGAAGTTCTTGACAAAGTGAAGTTATCTCAACTGTAGTGTGCTCTTGTACAAATGCTTGTAGAAGTTGCATTTAAATATTTGTTTCTAAGCTACAAAATTTAGAATGTTGAGAATAATATTCTAAGCATAAAATGTTTTTGAACTTGTTTTATTAAATTGCTTAGTTTTTTTAAAATGCTCGAATACAATTTTACTGATAAAAAATCAGTGATGTCACTTCAGTTGCAGTTTGTTGAGTAGGAACAATAGGGGTTGTTCTTTGAGTAGTTAAGTGCATTATATGATGCAAACAATCATTGTGTTTTGAGGCCTTGGACGAATGTAGTAACTAAGAATCATTGTGTCTGTCCCTGAAGCAGTAAACTTCAGATCTAAAAAAATTACTCTTTCTCCATAGGTGTATTCAACTATGTCCTCATCCAATAATTTTTTAATTCTTGAACTGAATTAAATTCTCAGTTTAATTTGAATGGTAGAGATATATATTTTAGGTTCAGCACGATTTTCAGAAATCAAGGTTAAAAGTTTCCTCGTGCATTATTCTGTCACATCCAAACGGTACAGTGATGGCATTAGTGATGAAATGTCAGTTGCTTGTTGAAAAAAGGTATACGGATGGCCTTTTTACAAGCGAGGAAAATAAATTGTTTGAAGAGAGATCCTATTCAGCAGTGTAAATAATGCCATTTTGGAAAGTGATGATTAATGATATTCATGTTGCAACGTTCATTTTCTTCGGTATTTCAGTTTTTTTTTTTTTTTTTTTTTGCAAGTGACCTGAATTTCTCATTGTTCACTTTAATATTTGAACTTCATTAATAACGTGGGATCCTTCTTAAATAAATGATTTATGATGCCAAGGATTCAATATCAAGTAATAACTCCATTTTTGTCATCGCTTTTGCAGAAGACAATTTCTCGAATTGCTTCTATTCAGAGTGAGGAAGAGAGTACTTATTTTTGTTCTGACCAGGAGTCCGTATGCTGTGATAATGAGACTCAAAGCAGAGGGGAAGCAGCATTATCTGATAATGAAGTTGAAGCAGTTGATTTGATGAAGAAAATTGAATTTATTAAGAAAGAGCGTTCTGCACTTTGGCTGCGGGAGTTCGAGGACTGGATGGATCGTGCTCCTCCAAATACTGTGAATGGCAATATCAACATGGCTATTTTGCACCCTGGGAAAGAAAATTATTTGAAAAGTAGGAAAACTGCACATCATGTTGGTGAGAGTTCAAGATATAAATCAGAGTCTATACAAGCATCAGGAGATGAAAGTAGTACAAATTTTGTGGAGTCAGATAGTTCCTTTGTAGACATACCTAGTGGTTTGACTACCTCGCATTACTTTGGCCTGAATGGGACTCTGGGTAATGATGTCGAAGTGCCCTTATCTAGAACACAGAGATTGGATCATAAAAGTAGTCACCTTAGTTCTTCATTTGAAGGAATCGATAGTCCATCCACCCATGTGAAAAGCTTTCATCCTTCGTATAATAGGTTCCAGGGAGGTCAAGCAAAGGTTGAAGATGGTAGTATGTCACCATTGTATGCCATTGATAGTATATCTGAGTCTCACTCTTCCTCAGCGTTCCCTGGATCACCACCCCATTATCAAGAAGATATTCTTCACCGCCGACATAACTTCATGGAAGAGATTTTGCAATTATCTGCAGAGTCATATTCAGTTCCTTCCTCTGATAGCTATTCCAGCAGTAGTGAGGATGATATCTTTCCCTTTGAACCATTAATGCAAGAAGTTATTCAACCTACAGAGGATAACTCTATACGTGGAAGTGCTGAAGGTCAATTGTCATTAGATCATAGTAAAGGCGGTACCTCTAAACAGTGTCATGAACATCTGGTGGGAGAAAATGGCCTGTGCCATTTTGATTCATCAGTTGATCAATTATCTAGCATGCAGAAGTCTGTTTTGCAAGGCTCCAGCATGCAGTTGCCTTGCAATGTTTTTCCTGCTGACGCTCATGCCTATGGAACCGATCATTCAATCCAATATGAGAACAGTAAGCTGAGGAACAGAGAAAGCAAAAGAAAAGTGAAAAAAAGAGTTGTTTCATTGTCAGGACATACTGTAGTTGGAATGACAGACAAGCACAAAGGGACAAGTTGTGATCGGAGTGTTTCTGGAGCTGATATGGAAATTGAATTGGAAAATGATAAATTTATTGAAAACTATTTCAATTTAAATATTGCAGATTCTGGAGTTCATGAAACTTGTCGGCAGTATCTCAAATGCATTTGTATACTTGATTCTGAGCTAGTCTACAGGTCTGTCATCGTTTAGTTCTTGTGGAAAATATTTTTCTATGATCCCATGTTTCTTATCCACAAAAGAAAAAAAGGAAGAACGGGGGCACAATTGCTTGCTTGCTAGGCAGACCAGCAATTTCCATTGAGATTTTGTTTGGCTTTTCCCCCTTCTTCTGCCGGTTCATAGTTTCAGAGGACCAGCACCCATTCGTCATCCTCCTCTAATTTATATGACTTGATTTAAATAGAAGCTTAGGTTATAAACCATCTCTTTCTTTAACTTCGCCGATAGTAGTGGGTTCTCTTGGATTAGCGCCATCCAATCAGGAAAAGTGGAAGAAAAAAAGACGAGGGAACAGTAACTGTATTATTTCCAGATTGTTGATTTCATGGTCCTCACAACTGGGTGGCATGATTTTTGGTCGAATGGTTAAATCATGGCTATTGGGATGCAATTTCTCTGAAAATGGTTTCAGTTACCCTTTTCTTCTGGTTTATACCCAATGCAATTAAGGGTATATTGATTGTATTAGATGATGAGCTTTCCCAAAAGTTTGAGTAACTGGTTAGGAAATAGTTAAGTTGCTTTATTTTTTAAAACATTCTCATATTGTGTCGCTTGCACATTATTTTGATGAGGTTTAACATGGGTGGTTTTGGAAACAGTGGGGAGATAACGTAAAGATACTTAAACTGAGTCTTCTTCTTTAGTATGATGTTAAATTATCTCTAATTCTATGTTAGTTTAGACATTTAGATTATCTTCTATGTATATCGAAGCCATATGTGATAATAAATAGTTAATTGTTTGAATTGTATTAATTTGTCCCAAGTATTGTTTGCTTGACATCGTTTGCATCCGAACTTGCAGAAAAGTGGTTCTTTTACTTAGTAGTAGAAACAAGTTGTATGTACTTATTGTTCGAGCGGCTGGAGATGGTTCAGGTTGGATTTTAATTCATTGTGCATATTTCAAATAGGTTCTTGTGTGTTTTGTCTACTCAAGGAATCTCTGGAGTTTCTAATTTCTTTCTTTATTGTTGTAGCTTGTTGCTAACTACAGTTTATCTGCCTCATAGGAGCCATTCTTATTTTATCGGATTGTCACAATGTTGAAGATATTAAAGAGGTCTTTGTGGGCCTGGGGCTTCAGGTTGTGAGGTTAGTGAGGTTTTCATAAATTCAGCGATCGTGCATAGCTCACATCCTCTGAAACATTCTTCTTTTTAATTGATATAGAGTTTGCATGGAGAGAAGCATCAAATATTTGTTTGTAACTAGATGCATTGAGAAATCGAGACAATTACTTTGTATGTTGCAAGTATCTGACATTGGGACACCTAGTGACAAGAGCTTCTTAAGAAGGTAATCTTGCTATACCTTGTATCAAGTGTAATGTGATTCTGTTGTATGGACAAAAATTATTGTCTTATATGCATGAAATTGGTGGGCATATTGATATTTGATTGATTATGCGTAGCCCCACGTGTATGCTCAGTCACACTGTTGAATCTTCACTTAATCTTTATTGTGGTAGACTCAGGTTTTGGATATTTATATGGCAGTTTGGAGCAGGTCCAGGTTGAATTATTTGAAAAACAAATATGTGGAGGTGCAAAAGCTAACTTACTTCAATATTCTATGGTGCTATTTTGTTGCAGTGAGATTCAAGGTAAGCTCATGCTCATCTCTCTTTGTTCATTCCCCGTAGTATACTTGATTTAAATGTACAGCATCGTGAGTCAAGCTATTTATTCATAATAAGAGCAACGACTGTGAGGACAGTGGAAAATAAATTACTAATTTATGGCCTGCAATATGTTCCCCGACATGTTAAAAACATTTTTTAGGATGGTTTAGCACTGCCAAAATAGTGTTTGGGGTTTCGGTCTCTAGCTCACATCATCAGATTAGTAAAAAGCTCCTACCGGGATTGTTAAGCTCTCAAAAGTAGAGTTCACGGCGTTGGTGTTTTTACCTCTCACCATCATGGTTGGAAATCAGAAATATTTCTAGTCTAAATAATAAAGACGGCAACATTCTGATAGGAAAAGAAATAAATGTAATATCTTTTGAGAGAATTTACTTGTTATCAACGAAACTTGATTGTTTGATTTATAATGCATGATCCTTATTCGAGCTTTATTCCTTCTCATTTCAACGAGGATTTTAATGGAAATGGGGACAGAAGTTATAACCCTTTTGTTTAATACCAACATCCTTTATAATAGCGGCAGATAATAAGAACTTTTCAAAAGGATTTCCCAATTTTTTTTTTTCTTGGAATGCTTATCAAGGAATGAGAAATTGCCATAATAGAAGTCTACTGTAGAAAAATATTTTCTGTCTTTCTCCATACTAGAAGATGCATGTTCCTTCTAGCTTTGTTTTCCAAATAGCTTCAATGTTTTTATTCTTCTTTGGAAAAATAGATCTTGAAAAGAAACTTTTTTTTTTGTCCCTTAGTTTTGAGTTTTGTTTTCATTTTGTCTTCAGATTTCAGTATATTGCACTTCTATTCCCAGTTTTGAGATTAATTTCATTTGGTTCCTAGTTCTCAAAATATCACACTTGACCTTTGGGTTCTCAACCGATGCTGACTTTTGGTCGCTCAAACGAAATGTTAACTAGGATGCCAATGGGTCTATTTAATATTAATTTATATTATTATATGCTCACATGGCAAAAAAAAAGTATATAAAATTTCAATAGGTTACGTGGCAAAAAAAATCCCCCTCGCCTCTTCCCTTTTCCTCTTTCCCATGGCTTCCACCCCTTCTCAGAGCCGGAGAAGCATAGTGTTTCCAGTTGATTTTTTGGTGAGTTTCAACTTCTTTGCCCCTCAAGGGTTAGAGTTTTTCAATTAGATTTTTTTTTTTTTTTTTTTAATTATTATCAAGCCGTGAGAAATTGAGCTTGGAGATTGCAATATTTTTTGCAATTATGTTTAGCATGTAATTTGAACTGTCGAGTGATAATTTCAATTAATGGGTCGTTTTTTTCTTTCTCTTTCAAGATCCGTTAATTTGAAAGCTTATTTCTTATTAACAATTTGGGAGGCCTTAGTAGACTGCCACTGTTGGTTGTATCAAGTAGAATGAGTGGCGGTGCAGGGTTGGATAAGAGTAGGAGAACGGGACATGACAACTGGTGGTTGACCGGTAAGAGGAGGAGGATAAGAATGGGTTAGGATTATTTGATAGAAGAGAGAGATAACGGGGTGGGGCAAAGAGTTTTTTTATTGTTTTCTTATCATATCACCTATCGAAATATTATAGCAATAAATACTTTACCATGTAAGCATGTGAATTAATATAAAATGAATTAATATGACAGACCAAAAGTGAGCCTTAGTGGAAACTTAAAAGGCTAGTGTAACATATTGAAACTCAGCAACCAACTAGAACTAAGGGATAAAAATATAGCCTTTTAAAGCGTAAGAATGAAATGAAAACTAAACTTAAAATTTAGAGATAAGGTGCAACATTTTGAAATCTAGAGGGGAAATGGTAACTGAACTCAGGGACCAAACTGATATTTTTCCAAAAAGTCCAATCCCAAATTTAGAGAGAACAAAAAACAACATCGAAGAAAAGTCAAAGTAATTAATTCTAGAAATTATATACGAAGTGAAACTACAAAGACATTTTTGGGAAAGCTTGTTCAATTTAATATGAAAAAATCGTTGCTTCTGTCGTGGAAGGCAGTGGGTTTGTGCTTCAAGTGATGAGGATCTTGCTTGCTTCGAAACTAGGGGATAAAATAGTCATTGATTTAGTGAAGCAACAGGCACTTCAAAAATGGATTAAAATATATCATAGAAGCTAGATAGTTCTTGACTCTACAAGGAGTCCATCATGGGATATGTGATTAGGAATAAATGTATATAGATTTCTCCCCCACCCCCCTAGAGAACTTGGGATGATGAATGGGTTTTGCAGTTACTTGTTTCTGATTAGATATAAACATATATATATTTTTTAAGTTTTAACAAAAGTATCTTGAAATATACCTTGCTGCCACGATCCACTGATATACCTTTTGATGCTACCCTTTGTTTGTTATTTAAACAAAGAATCTTGAAGTAGTGAAGCTTTCCTTTGATATACAGGAGAATTGTGGCGTCTTCGATCCTTATTTATTTTTGAAGGGCATTTAATTGTGTGCATCGAGGACTTAATGCACTTAATGCAATTCGATTCTTTCTCCATGGAAGGACCGTTACCTCCATACTATGCACTCGATTCATGTTGCTTGATTTCCGACATACTTGAGATGGTAATTTTCTGTTATTTATTGCTTATGCTTGTTTATGCTTTCAGAAACTTGACTCAAGTCTCAAATAGTGTAATCTTTCTTCCTGAGCTATGAGTAACGTTCATCTGTTCTATTGTTGTGGCACTTTAGGCAAACTGTGGTTAAGGGTTTTTTCCCTCTCAACTTGTTTTCCTGACTTTTTATGTAATTATTTTTGTGCTTTTTGATTCTTAACTATGACCATGAAATAATTTCGTTGTTTCATTTGTGATGTGAAAAGACTACTGAAAGCGAGAAGTGGAAGGGAATTTTTATAAATATTAGTGTCAAGAAGAGAGTTAGTCTGTTATGCCATGTAATGACTTCACTTGAGTTGTAGGACGCGCAAATTTGGGGAAAATAGAGACTTAATTGCTGGGATTTGGGTAAAATTTTAAGTTGACAAATAGGCAATCTGGCATTTGTCCATTCAACTTCACACTTAAGATGGCTTAGGCTATCGGGTCATGCTTTGTATTATTTTTATCTTCAGTCCGATGAGATGCCATTATTATCTTAGCCATATAGGTTGAAGTTTGGGGTAGTTATTGTCATAACCTTCATAAAATTTCAGGAAATGCAATTTTGACGGACTTACGTAGAAGCTCGATGCTTATTTTTTATTCTATAACGTCCGAACTGCTCTTATAGAAGTGAACAATAATTTTTTTATTCTTTACCGCATTTTTTCTTAAGAGATTTCTCTTCTATATTCTTTACTTCATTTTTAAAGGAAAAGAAATGATTGGCCTTCTTTCTTAATGCTCTTGTAAAATGTTACTAAATATAAACCTTGTTGACAGGTTGTTGACGTGAAGGGGGCGTTGTGTGTGACTTTATCTTTAAAATTTGCATCATCAGAGTTCTCCTTGGTCCCCAAATCTGACGAGGAGGTCACCGCCATCAAGAAGGAGACGTCATCACTGTGCTCTACGAAATGGAAGATCAAATGGTTCCATGAAGAAAATCTAGTTAATTTCATTGCATTGGCGAAGGCAATCCACCTAGGAAGTAAGGAGTCCCCCTTGCCTGTAAGATATTTATCATGATTGGGGAGGCTGGAGAAAAAAGGTATATAGGCAATGGCTGTTCATGTTTTTAGGTTCTGATTCAATTCATTCTTTTATTGGCTCTAGTGTGGTGAGTGCATTCTTTTTAGTTTGTTGTCTTTGGATTACTAA

mRNA sequence

GGTGAGCTATGAACCAATCATTCCTTGGTGCACCTTCATGACTGATTTCAGCCACCATTCTTCCGCCTTAAAATTGCTTTCGTTTTGATCGCCAATTTCTGTAATCTCAAGAGCTTTGAGCCGTAATCACTCTTCTACTTGTACGTGAAAAGAAGTTTCAATCCTTGATTGATAAACCAGCCAATTGCCGCCGGTTTTCATTTGGAGAATCTAGTAGAGATGGCTGTTTTTACACATGGAATCCCCAATTCCCGAATCTTCTGCGAAAGAGAGGGAACCTTGTTTTTAGGTTTTTCGGCTGCTCCAGTCTTGCCACAGAGGGCGAGAGTTTACCGACATTTTGCCAGAGAGAGAGGAAGTAGTCAAAGGTTGTCAAAAAAGGAACCTATTGATTTCCCAACGAAAGGATTCTTTGGCACAAAGAAAGTTGTCCTCACTGTCCCTAGGGACAGTAGCTCTTCAAACGCCAGCAGCAGCGAGGATGATCCGACAAATCAATCCAAGTCCACAAAAACAAAAGTGAACAATGCTTTACTGGGAATTGAAATCTCACAAACACCTTTTGGTTACACAAGGAAGGATGTTCTATTAATTGGATTGGGTGTCACAGTTCTTGGATTTGGGTTGAAAAGTGGATTAGAGTTTGCTGGGTTTGATCCTATGCAAGCAGGTAACGTGGTTCAGCTTGTACTGGTTTTGGGTTTAACGCTTGCATGGATTTCCACATATATGTTTAGAGTTTCAAATAAGGATATGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGGAGAAACGCCTGGAGAGCCTTACCGAAGCAGAGCTCGTAGCATTGCTCGAACAAGTCGAGGAAGAGAAAAGCCAATCAGCGAGTGGCGAACAGACAAACCCTAATTCGGCCATTGAGATGGCAATTGTTACCGGAGATCGATATTTGGAGAAGTTGGTGAAGTTTGTGGAGGAACACGCCGATCCTCTGATTGAAGGAACTTCGGTGTTGAAGCTAAATCCAGCGGGATTGCACTATGTGCAGTCGAGGTTGGAGGCCTTACATGAACTCGAGAGTCTTTTAACCGGAGCTCCAGTTGACTACCTTCGCGCTTATGTCTCCGACCTTGGCGACCACCGCGCGCTTGAGCAGCTCCGACGAATTCTGAGACTGCTCACATCTCTGAAGGTCGTTTCGGTGCTTCCGCAGCCGTTGCGAGACCCGACACCGCTGTCTCTGTTGCCGTTTGGAAGTCTGAAGGTTTTGGAGCTCAGAGGATGCGATTTGTCGACCTCGGCGGCGAGAGGATTGCTGGAGTTGAGGCAAACCTTGGAGAAGATCATTTGTCACAATTCTACTGATGCTCTGCGGCATGTGTTTGCAAGTAGGATTGTGGAGGTTAAGAATTCTGCACAATGGAGCCGATTGTCATTTGTTTCATGTGCGTGCAATGGCTTAGTTCTCATGGACGAGTCTTTGCAACTTCTACCTGCTGTTGAAACCCTTGATCTGAGCCGAAATAAGTTTGCAAAAGTGGACAATCTTCGCAAGTGTGTGAAACTGAAACATTTGGATCTTGGTTTTAATCATCTAAGGACAGTTGCCTCTTTTACTGAGCTGAAGTTAGATGACAAGGGAATCTGCAAAAGAGAATATTGGAAGAGGAAAATTATCATTGCTAGCAGGCAAAAGCGACCTGCCAGTTTTGGATTTTATTCCCCTGCAAAAGATGGTGCGCAAGGAGAGGGAAGCATAAACAGGAAAAAGAAGACAATTTCTCGAATTGCTTCTATTCAGAGTGAGGAAGAGAGTACTTATTTTTGTTCTGACCAGGAGTCCGTATGCTGTGATAATGAGACTCAAAGCAGAGGGGAAGCAGCATTATCTGATAATGAAGTTGAAGCAGTTGATTTGATGAAGAAAATTGAATTTATTAAGAAAGAGCGTTCTGCACTTTGGCTGCGGGAGTTCGAGGACTGGATGGATCGTGCTCCTCCAAATACTGTGAATGGCAATATCAACATGGCTATTTTGCACCCTGGGAAAGAAAATTATTTGAAAAGTAGGAAAACTGCACATCATGTTGGTGAGAGTTCAAGATATAAATCAGAGTCTATACAAGCATCAGGAGATGAAAGTAGTACAAATTTTGTGGAGTCAGATAGTTCCTTTGTAGACATACCTAGTGGTTTGACTACCTCGCATTACTTTGGCCTGAATGGGACTCTGGGTAATGATGTCGAAGTGCCCTTATCTAGAACACAGAGATTGGATCATAAAAGTAGTCACCTTAGTTCTTCATTTGAAGGAATCGATAGTCCATCCACCCATGTGAAAAGCTTTCATCCTTCGTATAATAGGTTCCAGGGAGGTCAAGCAAAGGTTGAAGATGGTAGTATGTCACCATTGTATGCCATTGATAGTATATCTGAGTCTCACTCTTCCTCAGCGTTCCCTGGATCACCACCCCATTATCAAGAAGATATTCTTCACCGCCGACATAACTTCATGGAAGAGATTTTGCAATTATCTGCAGAGTCATATTCAGTTCCTTCCTCTGATAGCTATTCCAGCAGTAGTGAGGATGATATCTTTCCCTTTGAACCATTAATGCAAGAAGTTATTCAACCTACAGAGGATAACTCTATACGTGGAAGTGCTGAAGGTCAATTGTCATTAGATCATAGTAAAGGCGGTACCTCTAAACAGTGTCATGAACATCTGGTGGGAGAAAATGGCCTGTGCCATTTTGATTCATCAGTTGATCAATTATCTAGCATGCAGAAGTCTGTTTTGCAAGGCTCCAGCATGCAGTTGCCTTGCAATGTTTTTCCTGCTGACGCTCATGCCTATGGAACCGATCATTCAATCCAATATGAGAACAGTAAGCTGAGGAACAGAGAAAGCAAAAGAAAAGTGAAAAAAAGAGTTGTTTCATTGTCAGGACATACTGTAGTTGGAATGACAGACAAGCACAAAGGGACAAGTTGTGATCGGAGTGTTTCTGGAGCTGATATGGAAATTGAATTGGAAAATGATAAATTTATTGAAAACTATTTCAATTTAAATATTGCAGATTCTGGAGTTCATGAAACTTGTCGGCAGTATCTCAAATGCATTTGTATACTTGATTCTGAGCTAGTCTACAGAAAAGTGGTTCTTTTACTTAGTAGTAGAAACAAGTTGTATGTACTTATTGTTCGAGCGGCTGGAGATGGTTCAGGAGCCATTCTTATTTTATCGGATTGTCACAATGTTGAAGATATTAAAGAGGTCTTTGTGGGCCTGGGGCTTCAGGTTGTGAGTTTGGAGCAGGTCCAGGTTGAATTATTTGAAAAACAAATATGTGGAGGTGCAAAAGCTAACTTACTTCAATATTCTATGGTGCTATTTTGTTGCAGTGAGATTCAAGAGTTCTCCTTGGTCCCCAAATCTGACGAGGAGGTCACCGCCATCAAGAAGGAGACGTCATCACTGTGCTCTACGAAATGGAAGATCAAATGGTTCCATGAAGAAAATCTAGTTAATTTCATTGCATTGGCGAAGGCAATCCACCTAGGAAGTAAGGAGTCCCCCTTGCCTTGTGGTGAGTGCATTCTTTTTAGTTTGTTGTCTTTGGATTACTAA

Coding sequence (CDS)

ATGGCTGTTTTTACACATGGAATCCCCAATTCCCGAATCTTCTGCGAAAGAGAGGGAACCTTGTTTTTAGGTTTTTCGGCTGCTCCAGTCTTGCCACAGAGGGCGAGAGTTTACCGACATTTTGCCAGAGAGAGAGGAAGTAGTCAAAGGTTGTCAAAAAAGGAACCTATTGATTTCCCAACGAAAGGATTCTTTGGCACAAAGAAAGTTGTCCTCACTGTCCCTAGGGACAGTAGCTCTTCAAACGCCAGCAGCAGCGAGGATGATCCGACAAATCAATCCAAGTCCACAAAAACAAAAGTGAACAATGCTTTACTGGGAATTGAAATCTCACAAACACCTTTTGGTTACACAAGGAAGGATGTTCTATTAATTGGATTGGGTGTCACAGTTCTTGGATTTGGGTTGAAAAGTGGATTAGAGTTTGCTGGGTTTGATCCTATGCAAGCAGGTAACGTGGTTCAGCTTGTACTGGTTTTGGGTTTAACGCTTGCATGGATTTCCACATATATGTTTAGAGTTTCAAATAAGGATATGACATATGCTCAACAACTACGTGACTACGAAGACAAAGTCATGGAGAAACGCCTGGAGAGCCTTACCGAAGCAGAGCTCGTAGCATTGCTCGAACAAGTCGAGGAAGAGAAAAGCCAATCAGCGAGTGGCGAACAGACAAACCCTAATTCGGCCATTGAGATGGCAATTGTTACCGGAGATCGATATTTGGAGAAGTTGGTGAAGTTTGTGGAGGAACACGCCGATCCTCTGATTGAAGGAACTTCGGTGTTGAAGCTAAATCCAGCGGGATTGCACTATGTGCAGTCGAGGTTGGAGGCCTTACATGAACTCGAGAGTCTTTTAACCGGAGCTCCAGTTGACTACCTTCGCGCTTATGTCTCCGACCTTGGCGACCACCGCGCGCTTGAGCAGCTCCGACGAATTCTGAGACTGCTCACATCTCTGAAGGTCGTTTCGGTGCTTCCGCAGCCGTTGCGAGACCCGACACCGCTGTCTCTGTTGCCGTTTGGAAGTCTGAAGGTTTTGGAGCTCAGAGGATGCGATTTGTCGACCTCGGCGGCGAGAGGATTGCTGGAGTTGAGGCAAACCTTGGAGAAGATCATTTGTCACAATTCTACTGATGCTCTGCGGCATGTGTTTGCAAGTAGGATTGTGGAGGTTAAGAATTCTGCACAATGGAGCCGATTGTCATTTGTTTCATGTGCGTGCAATGGCTTAGTTCTCATGGACGAGTCTTTGCAACTTCTACCTGCTGTTGAAACCCTTGATCTGAGCCGAAATAAGTTTGCAAAAGTGGACAATCTTCGCAAGTGTGTGAAACTGAAACATTTGGATCTTGGTTTTAATCATCTAAGGACAGTTGCCTCTTTTACTGAGCTGAAGTTAGATGACAAGGGAATCTGCAAAAGAGAATATTGGAAGAGGAAAATTATCATTGCTAGCAGGCAAAAGCGACCTGCCAGTTTTGGATTTTATTCCCCTGCAAAAGATGGTGCGCAAGGAGAGGGAAGCATAAACAGGAAAAAGAAGACAATTTCTCGAATTGCTTCTATTCAGAGTGAGGAAGAGAGTACTTATTTTTGTTCTGACCAGGAGTCCGTATGCTGTGATAATGAGACTCAAAGCAGAGGGGAAGCAGCATTATCTGATAATGAAGTTGAAGCAGTTGATTTGATGAAGAAAATTGAATTTATTAAGAAAGAGCGTTCTGCACTTTGGCTGCGGGAGTTCGAGGACTGGATGGATCGTGCTCCTCCAAATACTGTGAATGGCAATATCAACATGGCTATTTTGCACCCTGGGAAAGAAAATTATTTGAAAAGTAGGAAAACTGCACATCATGTTGGTGAGAGTTCAAGATATAAATCAGAGTCTATACAAGCATCAGGAGATGAAAGTAGTACAAATTTTGTGGAGTCAGATAGTTCCTTTGTAGACATACCTAGTGGTTTGACTACCTCGCATTACTTTGGCCTGAATGGGACTCTGGGTAATGATGTCGAAGTGCCCTTATCTAGAACACAGAGATTGGATCATAAAAGTAGTCACCTTAGTTCTTCATTTGAAGGAATCGATAGTCCATCCACCCATGTGAAAAGCTTTCATCCTTCGTATAATAGGTTCCAGGGAGGTCAAGCAAAGGTTGAAGATGGTAGTATGTCACCATTGTATGCCATTGATAGTATATCTGAGTCTCACTCTTCCTCAGCGTTCCCTGGATCACCACCCCATTATCAAGAAGATATTCTTCACCGCCGACATAACTTCATGGAAGAGATTTTGCAATTATCTGCAGAGTCATATTCAGTTCCTTCCTCTGATAGCTATTCCAGCAGTAGTGAGGATGATATCTTTCCCTTTGAACCATTAATGCAAGAAGTTATTCAACCTACAGAGGATAACTCTATACGTGGAAGTGCTGAAGGTCAATTGTCATTAGATCATAGTAAAGGCGGTACCTCTAAACAGTGTCATGAACATCTGGTGGGAGAAAATGGCCTGTGCCATTTTGATTCATCAGTTGATCAATTATCTAGCATGCAGAAGTCTGTTTTGCAAGGCTCCAGCATGCAGTTGCCTTGCAATGTTTTTCCTGCTGACGCTCATGCCTATGGAACCGATCATTCAATCCAATATGAGAACAGTAAGCTGAGGAACAGAGAAAGCAAAAGAAAAGTGAAAAAAAGAGTTGTTTCATTGTCAGGACATACTGTAGTTGGAATGACAGACAAGCACAAAGGGACAAGTTGTGATCGGAGTGTTTCTGGAGCTGATATGGAAATTGAATTGGAAAATGATAAATTTATTGAAAACTATTTCAATTTAAATATTGCAGATTCTGGAGTTCATGAAACTTGTCGGCAGTATCTCAAATGCATTTGTATACTTGATTCTGAGCTAGTCTACAGAAAAGTGGTTCTTTTACTTAGTAGTAGAAACAAGTTGTATGTACTTATTGTTCGAGCGGCTGGAGATGGTTCAGGAGCCATTCTTATTTTATCGGATTGTCACAATGTTGAAGATATTAAAGAGGTCTTTGTGGGCCTGGGGCTTCAGGTTGTGAGTTTGGAGCAGGTCCAGGTTGAATTATTTGAAAAACAAATATGTGGAGGTGCAAAAGCTAACTTACTTCAATATTCTATGGTGCTATTTTGTTGCAGTGAGATTCAAGAGTTCTCCTTGGTCCCCAAATCTGACGAGGAGGTCACCGCCATCAAGAAGGAGACGTCATCACTGTGCTCTACGAAATGGAAGATCAAATGGTTCCATGAAGAAAATCTAGTTAATTTCATTGCATTGGCGAAGGCAATCCACCTAGGAAGTAAGGAGTCCCCCTTGCCTTGTGGTGAGTGCATTCTTTTTAGTTTGTTGTCTTTGGATTACTAA

Protein sequence

MAVFTHGIPNSRIFCEREGTLFLGFSAAPVLPQRARVYRHFARERGSSQRLSKKEPIDFPTKGFFGTKKVVLTVPRDSSSSNASSSEDDPTNQSKSTKTKVNNALLGIEISQTPFGYTRKDVLLIGLGVTVLGFGLKSGLEFAGFDPMQAGNVVQLVLVLGLTLAWISTYMFRVSNKDMTYAQQLRDYEDKVMEKRLESLTEAELVALLEQVEEEKSQSASGEQTNPNSAIEMAIVTGDRYLEKLVKFVEEHADPLIEGTSVLKLNPAGLHYVQSRLEALHELESLLTGAPVDYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPQPLRDPTPLSLLPFGSLKVLELRGCDLSTSAARGLLELRQTLEKIICHNSTDALRHVFASRIVEVKNSAQWSRLSFVSCACNGLVLMDESLQLLPAVETLDLSRNKFAKVDNLRKCVKLKHLDLGFNHLRTVASFTELKLDDKGICKREYWKRKIIIASRQKRPASFGFYSPAKDGAQGEGSINRKKKTISRIASIQSEEESTYFCSDQESVCCDNETQSRGEAALSDNEVEAVDLMKKIEFIKKERSALWLREFEDWMDRAPPNTVNGNINMAILHPGKENYLKSRKTAHHVGESSRYKSESIQASGDESSTNFVESDSSFVDIPSGLTTSHYFGLNGTLGNDVEVPLSRTQRLDHKSSHLSSSFEGIDSPSTHVKSFHPSYNRFQGGQAKVEDGSMSPLYAIDSISESHSSSAFPGSPPHYQEDILHRRHNFMEEILQLSAESYSVPSSDSYSSSSEDDIFPFEPLMQEVIQPTEDNSIRGSAEGQLSLDHSKGGTSKQCHEHLVGENGLCHFDSSVDQLSSMQKSVLQGSSMQLPCNVFPADAHAYGTDHSIQYENSKLRNRESKRKVKKRVVSLSGHTVVGMTDKHKGTSCDRSVSGADMEIELENDKFIENYFNLNIADSGVHETCRQYLKCICILDSELVYRKVVLLLSSRNKLYVLIVRAAGDGSGAILILSDCHNVEDIKEVFVGLGLQVVSLEQVQVELFEKQICGGAKANLLQYSMVLFCCSEIQEFSLVPKSDEEVTAIKKETSSLCSTKWKIKWFHEENLVNFIALAKAIHLGSKESPLPCGECILFSLLSLDY

Homology

[Close]

BLAST of CmaCh11G003200 vs. ExPASy Swiss-Prot
Match: Q3TAA7 (Serine/threonine-protein kinase 11-interacting protein OS=Mus musculus OX=10090 GN=Stk11ip PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-13
Identity = 70/232 (30.17%), Postives = 106/232 (45.69%), Query Frame = 0


Query: 233 MAIVTGDRYLEKLVKFVEEHADPLIEGTSVLKLNPAGLHYVQSRLEALHELESLLTGAPV 292
           M     D  + KL   + E  D ++ G S L L  A L     +L  + EL     G   
Sbjct: 1   MTTAPRDSVVWKLAGLLRESGDAVLSGCSTLSLLTATL----QQLNRVFELYLGPWGPGQ 60

Query: 293 DYLRAYVSDLGDHRALEQLR---RILRLLTSLKVVSVLPQPLRDPTPLSLLPFGSLKVLE 352
               A  S   D   + QL+    +L+   SLK+V +    L  P P+ + PF SL+ LE
Sbjct: 61  TGFVALPSHPADSPVILQLQFLFDVLQKTLSLKLVHIPGVGL--PGPIKIFPFKSLRQLE 120

Query: 353 LRGCDLSTSAARGLLELRQTLEKIICHNSTDALRHVFASRIVEVKNSAQWSRLSFVSCAC 412
           LRG  + +    GL  +   LE ++C+ S  AL  + ++   ++ ++  W  L     + 
Sbjct: 121 LRGVPIHSLC--GLRGIYSQLESLVCNRSIQALEELLSACGGDLCSALPWLALLSADFSY 180

Query: 413 NGLVLMDESLQLLPAVETLDLSRNKFAKVDN-LRKCVKLKHLDLGFNHLRTV 461
           N L  +D SL+LL A+  L+LS N        L    +L HLD+ +NHLR V
Sbjct: 181 NALRSLDSSLRLLSALRFLNLSHNHLQDCKGFLMDLCELYHLDISYNHLRLV 224

[Close]

BLAST of CmaCh11G003200 vs. ExPASy Swiss-Prot
Match: Q8N1F8 (Serine/threonine-protein kinase 11-interacting protein OS=Homo sapiens OX=9606 GN=STK11IP PE=1 SV=4)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-11
Identity = 71/233 (30.47%), Postives = 102/233 (43.78%), Query Frame = 0


Query: 233 MAIVTGDRYLEKLVKFVEEHADPLIEGTSVLKLNPAGLHYVQSRLEALHELESLLTGAPV 292
           M     D  L KL   + E  D ++ G S L L    L     +L  + EL     G   
Sbjct: 1   MTTAQRDSLLWKLAGLLRESGDVVLSGCSTLSL----LTPTLQQLNHVFELHLGPWGPGQ 60

Query: 293 DYLRAYVSDLGDHRALEQLR---RILRLLTSLKVVSVL-PQPLRDPTPLSLLPFGSLKVL 352
               A  S   D   + QL+    +L+   SLK+V V  P P     P+ + PF SL+ L
Sbjct: 61  TGFVALPSHPADSPVILQLQFLFDVLQKTLSLKLVHVAGPGP---TGPIKIFPFKSLRHL 120

Query: 353 ELRGCDLSTSAARGLLELRQTLEKIICHNSTDALRHVFASRIVEVKNSAQWSRLSFVSCA 412
           ELRG  L      GL  +   LE +IC  S  AL  + ++   +  ++  W  L   + +
Sbjct: 121 ELRGVPL--HCLHGLRGIYSQLETLICSRSLQALEELLSACGGDFCSALPWLALLSANFS 180

Query: 413 CNGLVLMDESLQLLPAVETLDLSRNKFAKVDN-LRKCVKLKHLDLGFNHLRTV 461
            N L  +D SL+LL A+  L+LS N+       L    +L HLD+ +N L  V
Sbjct: 181 YNALTALDSSLRLLSALRFLNLSHNQVQDCQGFLMDLCELHHLDISYNRLHLV 224

[Close]

BLAST of CmaCh11G003200 vs. ExPASy Swiss-Prot
Match: Q5F479 (Serine/threonine-protein kinase 11-interacting protein OS=Gallus gallus OX=9031 GN=STK11IP PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-08
Identity = 60/228 (26.32%), Postives = 109/228 (47.81%), Query Frame = 0


Query: 245 LVKFVEEHADPLIEGTSVLKLNPAGLHYVQSRLEALHELESLLTGAPVDYLRAYVSDLGD 304
           L + +++  D +++G+S L L    L ++    E    L S         L ++ ++   
Sbjct: 16  LARLLQDTGDLVLDGSSTLTLLTPTLQHLTRVFE--QHLGSRNQHRGFVALPSHPAETTA 75

Query: 305 HRALEQLRRILRLLTSLKVVSVLPQPLRDPTPLSLLPFGSLKVLELRGCDLSTSAARGLL 364
               + L  +L+   SLK++ V    L+  + + + PF SL+ LELR   +     RGL 
Sbjct: 76  ILQAQFLFDMLQKTHSLKLIHVPNCALQ--STVKIFPFKSLRHLELR--SVPPHCLRGLR 135

Query: 365 ELRQTLEKIICHNSTDALRHVFASRIVEVKNSAQWSRLSFVSCACNGLVLMDESLQLLPA 424
            +   LE + C      L  + ++   ++  +  W  L  V+ + N +  +D+SLQLL A
Sbjct: 136 FVYSQLESLTCSKCVSTLEEIISACGGDLSCALPWLELQTVNFSYNSITALDDSLQLLNA 195

Query: 425 VETLDLSRNKFAKVDN-LRKCVKLKHLDLGFNHLRTVAS---FTELKL 469
           +  LDLS NK    ++ L    +L++L+L +N L  V +   F++ KL
Sbjct: 196 LRVLDLSHNKVQDCEHYLTTLSELEYLNLAYNFLSKVPNLGIFSQSKL 237

[Close]

BLAST of CmaCh11G003200 vs. ExPASy Swiss-Prot
Match: Q80TM9 (Nischarin OS=Mus musculus OX=10090 GN=Nisch PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-07
Identity = 42/141 (29.79%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 336 PLSLLPFGSLKVLELRGCDLSTSAARGLLELRQTLEKIICHNSTDALRHVFASRIVEVKN 395
           P  L  F SL  +E+  CD      RGL+  + TL  +    S  +++ V A    E   
Sbjct: 211 PFDLSIFKSLHQVEISHCD--AKHIRGLVTSKPTLATMSVRFSATSMKEVLAPEASEFDE 270

Query: 396 ----------------SAQWSRLSFVSCACNGLVLMDESLQLLPAVETLDLSRNKFAKVD 455
                              W  L+ +  + N +  +DES++L+P +E LDLS N    VD
Sbjct: 271 WEPEGTATLGGPVTAIIPTWQALTTLDLSHNSICEIDESVKLIPKIEYLDLSHNGLRVVD 330

Query: 456 NLRKCVKLKHLDLGFNHLRTV 461
           NL+    L HLDL +N L ++
Sbjct: 331 NLQHLYNLVHLDLSYNKLSSL 349

[Close]

BLAST of CmaCh11G003200 vs. ExPASy Swiss-Prot
Match: Q9Y2I1 (Nischarin OS=Homo sapiens OX=9606 GN=NISCH PE=1 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 5.5e-07
Identity = 41/140 (29.29%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 336 PLSLLPFGSLKVLELRGCDLSTSAARGLLELRQTLEKIICHNSTDALRHVFASRIVEVKN 395
           P  L  F SL  +E+  CD      RGL+  + TL  +    S  +++ V      E   
Sbjct: 210 PFDLSIFKSLHQVEISHCD--AKHIRGLVASKPTLATLSVRFSATSMKEVLVPEASEFDE 269

Query: 396 ---------------SAQWSRLSFVSCACNGLVLMDESLQLLPAVETLDLSRNKFAKVDN 455
                             W  L+ +  + N +  +DES++L+P +E LDLS N    VDN
Sbjct: 270 WEPEGTTLEGPVTAVIPTWQALTTLDLSHNSVSEIDESVKLIPKIEFLDLSHNGLLVVDN 329

Query: 456 LRKCVKLKHLDLGFNHLRTV 461
           L+    L HLDL +N L ++
Sbjct: 330 LQHLYNLVHLDLSYNKLSSL 347

[Close]

BLAST of CmaCh11G003200 vs. TAIR 10
Match: AT1G48540.2 (Outer arm dynein light chain 1 protein )

HSP 1 Score: 640.6 bits (1651), Expect = 2.4e-183
Identity = 431/1073 (40.17%), Postives = 567/1073 (52.84%), Query Frame = 0


Query: 233  MAIVTGDRYLEKLVKFVEEHADPLIEGTSVLKLNPAGLHYVQSRLEALHELESLLTGAPV 292
            MAIVTGDRY+EKL KF+E+ A+ L+E T +LKLNPAGLHY+  RL++L ELE +L+ APV
Sbjct: 1    MAIVTGDRYVEKLQKFLEDEAESLLEETMILKLNPAGLHYLHLRLDSLRELERMLSNAPV 60

Query: 293  DYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPQPLRDPTPLSLLPFGSLKVLELRG 352
            DYLRAYVSDLGD+RALEQLRRILR+LTSLKVVS LP P RDPTPLSL PFGSLKVLELR 
Sbjct: 61   DYLRAYVSDLGDYRALEQLRRILRILTSLKVVSTLPSPARDPTPLSLFPFGSLKVLELRR 120

Query: 353  CDLSTSAARGLLELRQTLEKIICHNSTDALRHVFASRIVEVKNSAQWSRLSFVSCACNGL 412
            CDLSTS A+GL+ELR TLEKIICHNSTDALRHVFASRI E+ NS +W++L+ +SCACN L
Sbjct: 121  CDLSTSPAKGLIELRHTLEKIICHNSTDALRHVFASRIAEITNSPEWNKLAVISCACNRL 180

Query: 413  VLMDESLQLLPAVETLDLSRNKFAKVDNLRKCVKLKHLDLGFNHLRTVASFT-------- 472
            VLMDESLQLLPA E+LDLSRNKF KVDNLR+C KLKHLDLGFNHLRTV+  +        
Sbjct: 181  VLMDESLQLLPAAESLDLSRNKFVKVDNLRRCTKLKHLDLGFNHLRTVSYLSQVSCHLVK 240

Query: 473  ------------------------------------------------------------ 532
                                                                        
Sbjct: 241  LVLRNNALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWSLSQLKELWLEGNPVCCARW 300

Query: 533  -------------ELKLDDKGICKREYWKRKIIIASRQKRPASFGFYSPAKDGAQGEGSI 592
                         ELKLD K I  RE+WKR+II+A RQ  PAS+GFYSPA++    EGS 
Sbjct: 301  YRAHVFSYVALPDELKLDGKQIGTREFWKRQIIVAHRQSEPASYGFYSPAREEDNEEGSC 360

Query: 593  NRKKKTISRIASIQSEEESTYFCSDQESVCCDNETQSRGEAALSDNEVEAVDLMKKIEFI 652
            NRKKK I R+ASI SE ESTY  SD ES  CD+E +   E    + E +   L+ K+E +
Sbjct: 361  NRKKKKICRLASIHSEAESTYVNSDHESATCDHENK---ENMKFNQEADIFGLISKVEHL 420

Query: 653  KKERSALWLREFEDWMDRAPPNTVNGNINMAILHPGKENYLKSRK-TAHHVGESSRYKSE 712
            KKERS LWLREF++WMDR+  +  +   +   ++  K+ Y K R+ + HH G + RY S 
Sbjct: 421  KKERSVLWLREFKEWMDRSTEDFADVCKDSQGINLEKKYYTKIREISRHHGGGTPRYTSG 480

Query: 713  SIQASGDESSTNFVESDSSFVDIPSGLTTSHYFGLNGTLGNDVEVPLSRTQRLDHKSSHL 772
            S++AS  +S    +E + S VD  +G+    Y   N T     ++     Q  D    H 
Sbjct: 481  SLRASRAKSYRKNLECNGSCVDHKAGMDYMKYVEGNETQKITDDISSISLQSTDRNQKHQ 540

Query: 773  SSSFEGIDSPSTHVKSFHPSYNRFQGGQAKVEDGSMSPLYAIDSISESHSSSAFPGSPPH 832
                + ++S S       P+       +   E+G+MS L     I++  + S +PGSPPH
Sbjct: 541  ECVHDEMESLSVEPNDLLPT---TLAKEKLAENGNMSTL----DITQHMTGSTYPGSPPH 600

Query: 833  YQEDILHRRHNFMEEILQLSAESYSVPSSDSYSSSSEDDIFPFEPLMQEVIQPTEDNSIR 892
            YQ+D+L+RRHN +EEILQLSA+SYSV SSDS SS SEDD +  E       +    + + 
Sbjct: 601  YQKDVLYRRHNLVEEILQLSADSYSVASSDSTSSCSEDDNYDSESEYSNHKEGRLTDLLN 660

Query: 893  GSAEGQLSLDHSKGGTSKQCHEHLVGENGLCHFDSSVDQLSSMQKSVLQGSSMQLPCNVF 952
             +  G+  L+ +  GT                F  S  +  S  K++    SM+     F
Sbjct: 661  VNRLGKEILECTPKGT---------------RFLGSQPENGSTIKTLRTDESMKETTTNF 720

Query: 953  PADAH--AYGTDH---------------SIQYENSKLRNRESKRKVKKRVVSLSGHTVVG 1012
            P+  H   +G +                S Q E S + N E   +     +S SG  V  
Sbjct: 721  PSGLHNGKHGVNQTDRLVEKRKPIKRFVSFQKEESCITNGEISLR-SDADISDSGEDVCI 780

Query: 1013 MTDKHKGT---SCDRSVSGADMEIELENDKFIENYFNLNIADSGVHETCRQYLKCICILD 1072
              +  + T    C  S + +   +  +    +E YF+  ++ S   ETCR Y+ C  IL 
Sbjct: 781  SDNFWENTLSRVCSSSSNRSIKFLGTDRTLGVEEYFSAKLSVSSSQETCRTYMNCDLILQ 840

Query: 1073 SELVY--RKVVLLLSSRNKLYVLIVRAAGDGSGAILILSDCHNVEDIKEVFVGLGLQVV- 1120
                Y  R+ VLLLSS++KLYVL+V    D  G+ L +   H ++D+++V VGLGLQ V 
Sbjct: 841  KGSTYKQREAVLLLSSQDKLYVLLVGVTTDYEGSTLSVLCSHEIKDLQDVSVGLGLQFVR 900

[Close]

BLAST of CmaCh11G003200 vs. TAIR 10
Match: AT1G48540.1 (Outer arm dynein light chain 1 protein )

HSP 1 Score: 637.1 bits (1642), Expect = 2.7e-182
Identity = 433/1083 (39.98%), Postives = 569/1083 (52.54%), Query Frame = 0


Query: 233  MAIVTGDRYLEKLVKFVEEHADPLIEGTSVLKLNPAGLHYVQSRLEALHELESLLTGAPV 292
            MAIVTGDRY+EKL KF+E+ A+ L+E T +LKLNPAGLHY+  RL++L ELE +L+ APV
Sbjct: 1    MAIVTGDRYVEKLQKFLEDEAESLLEETMILKLNPAGLHYLHLRLDSLRELERMLSNAPV 60

Query: 293  DYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPQPLRDPTPLSLLPFGSLKVLELRG 352
            DYLRAYVSDLGD+RALEQLRRILR+LTSLKVVS LP P RDPTPLSL PFGSLKVLELR 
Sbjct: 61   DYLRAYVSDLGDYRALEQLRRILRILTSLKVVSTLPSPARDPTPLSLFPFGSLKVLELRR 120

Query: 353  CDLSTSAARGLLELRQTLEKIICHNSTDALRHVFASRIVEVKNSAQWSRLSFVSCACNGL 412
            CDLSTS A+GL+ELR TLEKIICHNSTDALRHVFASRI E+ NS +W++L+ +SCACN L
Sbjct: 121  CDLSTSPAKGLIELRHTLEKIICHNSTDALRHVFASRIAEITNSPEWNKLAVISCACNRL 180

Query: 413  VLMDESLQLLPAVETLDLSRNKFAKVDNLRKCVKLKHLDLGFNHLRTVASFT-------- 472
            VLMDESLQLLPA E+LDLSRNKF KVDNLR+C KLKHLDLGFNHLRTV+  +        
Sbjct: 181  VLMDESLQLLPAAESLDLSRNKFVKVDNLRRCTKLKHLDLGFNHLRTVSYLSQVSCHLVK 240

Query: 473  ------------------------------------------------------------ 532
                                                                        
Sbjct: 241  LVLRNNALTTLRGIENLKSLQGLDVSYNIISNFSELEFLWSLSQLKELWLEGNPVCCARW 300

Query: 533  -------------ELKLDDKGICKREYWKRKIIIASRQKRPASFGFYSPAKDGAQGEGSI 592
                         ELKLD K I  RE+WKR+II+A RQ  PAS+GFYSPA++    EGS 
Sbjct: 301  YRAHVFSYVALPDELKLDGKQIGTREFWKRQIIVAHRQSEPASYGFYSPAREEDNEEGSC 360

Query: 593  NRKKKTISRIASIQSEEESTYFCSDQESVCCDNETQSRGEAALSDNEVEAVDLMKKIEFI 652
            NRKKK I R+ASI SE ESTY  SD ES  CD+E +   E    + E +   L+ K+E +
Sbjct: 361  NRKKKKICRLASIHSEAESTYVNSDHESATCDHENK---ENMKFNQEADIFGLISKVEHL 420

Query: 653  KKERSALWLREFEDWMDRAPPNTVNGNINMAILHPGKENYLKSRK-TAHHVGESSRYKSE 712
            KKERS LWLREF++WMDR+  +  +   +   ++  K+ Y K R+ + HH G + RY S 
Sbjct: 421  KKERSVLWLREFKEWMDRSTEDFADVCKDSQGINLEKKYYTKIREISRHHGGGTPRYTSG 480

Query: 713  SIQASGDESSTNFVESDSSFVDIPSGLTTSHYFGLNGTLGNDVEVPLSRTQRLDHKSSHL 772
            S++AS  +S    +E + S VD  +G+    Y   N T     ++     Q  D    H 
Sbjct: 481  SLRASRAKSYRKNLECNGSCVDHKAGMDYMKYVEGNETQKITDDISSISLQSTDRNQKHQ 540

Query: 773  SSSFEGIDSPSTHVKSFHPSYNRFQGGQAKVEDGSMSPLYAIDSISESHSSSAFPGSPPH 832
                + ++S S       P+       +   E+G+MS L     I++  + S +PGSPPH
Sbjct: 541  ECVHDEMESLSVEPNDLLPT---TLAKEKLAENGNMSTL----DITQHMTGSTYPGSPPH 600

Query: 833  YQEDILHRRHNFMEEILQLSAESYSVPSSDSYSSSSEDDIFPFEPLMQEVIQPTEDNSIR 892
            YQ+D+L+RRHN +EEILQLSA+SYSV SSDS SS SEDD +  E       +    + + 
Sbjct: 601  YQKDVLYRRHNLVEEILQLSADSYSVASSDSTSSCSEDDNYDSESEYSNHKEGRLTDLLN 660

Query: 893  GSAEGQLSLDHSKGGTSKQCHEHLVGENGLCHFDSSVDQLSSMQKSVLQGSSMQLPCNVF 952
             +  G+  L+ +  GT                F  S  +  S  K++    SM+     F
Sbjct: 661  VNRLGKEILECTPKGT---------------RFLGSQPENGSTIKTLRTDESMKETTTNF 720

Query: 953  PADAH--AYGTDH---------------SIQYENSKLRNRESKRKVKKRVVSLSGHTVVG 1012
            P+  H   +G +                S Q E S + N E   +     +S SG  V  
Sbjct: 721  PSGLHNGKHGVNQTDRLVEKRKPIKRFVSFQKEESCITNGEISLR-SDADISDSGEDVCI 780

Query: 1013 MTDKHKGT---SCDRSVSGADMEIELENDKFIENYFNLNIADSGVHETCRQYLKCICILD 1072
              +  + T    C  S + +   +  +    +E YF+  ++ S   ETCR Y+ C  IL 
Sbjct: 781  SDNFWENTLSRVCSSSSNRSIKFLGTDRTLGVEEYFSAKLSVSSSQETCRTYMNCDLILQ 840

Query: 1073 SELVY--RKVVLLLSSRNKLYVLIVRAAGDGSGAILILSDCHNVEDIKEVFVGLGLQVV- 1120
                Y  R+ VLLLSS++KLYVL+V    D  G+ L +   H ++D+++V VGLGLQ V 
Sbjct: 841  KGSTYKQREAVLLLSSQDKLYVLLVGVTTDYEGSTLSVLCSHEIKDLQDVSVGLGLQFVR 900

[Close]

BLAST of CmaCh11G003200 vs. TAIR 10
Match: AT3G17920.1 (Outer arm dynein light chain 1 protein )

HSP 1 Score: 602.8 bits (1553), Expect = 5.6e-172
Identity = 409/973 (42.03%), Postives = 517/973 (53.13%), Query Frame = 0


Query: 233  MAIVTGDRYLEKLVKFVEEHADPLIEGTSVLKLNPAGLHYVQSRLEALHELESLLTGAPV 292
            MAIVTGDRYLE L +F++E AD LI+GT VLKLNPAGLHYV  RLE+L ELE +L+GAPV
Sbjct: 1    MAIVTGDRYLENLQRFLDEKADLLIDGTDVLKLNPAGLHYVHLRLESLRELELMLSGAPV 60

Query: 293  DYLRAYVSDLGDHRALEQLRRILRLLTSLKVVSVLPQPLRDPTPLSLLPFGSLKVLELRG 352
            DYLRAYVSD+GD RALEQLRRILRLL SLKVVS LP P RDPTPLSLLPF  LKVLELRG
Sbjct: 61   DYLRAYVSDIGDFRALEQLRRILRLLPSLKVVSSLPSPARDPTPLSLLPFSKLKVLELRG 120

Query: 353  CDLSTSAARGLLELRQTLEKIICHNSTDALRHVFASRIVEVKNSAQWSRLSFVSCACNGL 412
            CDLSTS+A+GLLELR TLEK+ICHNSTDALRHVFASRI E+K+S QW++L+F+SCACN L
Sbjct: 121  CDLSTSSAKGLLELRHTLEKLICHNSTDALRHVFASRIAEIKDSPQWNKLAFISCACNRL 180

Query: 413  VLMDESLQLLPAVETLDLSRNKFAKVDNLRKCVKLKHLDLGFNHLRTVASFTE------- 472
            VLMDESLQLLPAVE+LDLSRNKFAKVDNLR+C KLKHLDLGFN LR ++  +E       
Sbjct: 181  VLMDESLQLLPAVESLDLSRNKFAKVDNLRRCNKLKHLDLGFNQLRKISHLSEVSCHLVK 240

Query: 473  ------------------------------------------------------------ 532
                                                                        
Sbjct: 241  LVLRNNALTTLRGIENLKSLEGLDVSFNLISDFSELEFLGSLSFLTDLWLEGNPICCARW 300

Query: 533  --------------LKLDDKGICKREYWKRKIIIASRQKRPASFGFYSPAKDGAQGEGSI 592
                          LKLD K I  RE+WKR++++  R+ +PAS+GFYSPA+D A  EGS 
Sbjct: 301  YRAHVLSYVYLPNDLKLDGKHIGNREFWKRQVVVTRRKSQPASYGFYSPARDEADDEGSF 360

Query: 593  NRKKKTISRIASIQSEEESTYFCSDQESVCCDNETQSRGEAALSDNEVEAVDLMKKIEFI 652
             RKK  I R+ASI SEEESTY  SDQES  C+ ETQS+ E   SD+E +   L+ K+E +
Sbjct: 361  TRKKTKIYRLASIDSEEESTYVNSDQESASCEPETQSKEENIKSDHEADVFGLICKVEQL 420

Query: 653  KKERSALWLREFEDWMDRAPPNTVNGNINMAILHPGKENYLKSRKTAHHVGESSRYKSES 712
            KKERS LWLREF++W+D    + V+ + N +     ++ Y+K+R    H GE+ RY    
Sbjct: 421  KKERSVLWLREFKEWIDHPSEDFVDVSKNGSSTDSEQKYYMKNRNGPKHHGETMRY---- 480

Query: 713  IQASGDESSTNFVESDSSFVDIPSGLTTSHYFGLNGTLGNDVEVPLSRTQRLDHKSSHLS 772
                                                T G     PL   Q  D    H +
Sbjct: 481  ------------------------------------TPG-----PLPSFQITDLNQKHQA 540

Query: 773  SSFEGIDSPSTHVKSFHPSYNRFQGGQAKVEDGSMSPLYAIDSISESHSSSAFPGSPPHY 832
               +G   P                     E+G+MS L A    S+  + S  P SPPHY
Sbjct: 541  FFLDG--KPD--------------------ENGNMSTLDA----SQDMTGSFSPSSPPHY 600

Query: 833  QEDILHRRHNFMEEILQLSAESYSVPSSDSYSSSSEDDIFPFEPLMQEVIQPTEDNSIRG 892
            Q+D+LHRR N +EEILQ+SA+SYSV SSD  SS SE++ +  E    E  Q T  + + G
Sbjct: 601  QKDVLHRRQNLVEEILQISADSYSVASSD--SSCSENENYDSEQSNPE--QDTLKDHLSG 660

Query: 893  SAEGQLSLDHSKGGTSKQCHEHLVGENGLCHFDSSVDQLSSMQKSVLQGSSMQLPCNVFP 952
            +     SL  S+   S       + ++       + + LS + KS L     Q+      
Sbjct: 661  NRGEDTSLLDSQPEKSSIIKSWKIEDSFKA---KTTNFLSGLHKSELASGVNQIYRWFDK 720

Query: 953  ADAHAYGTDHSIQ--YENSKLRNRESKRKVKKRVVS------LSGHTVVGMTDKHKGTSC 1012
              +       ++    E S ++  E+  +    ++       +S H   G      G + 
Sbjct: 721  KQSKRKPKKRNVSPLEEYSFIKKGETSHRSDADIIDSCEDEYISDHFQEGSLT--TGCNS 780

Query: 1013 DRSVSGADMEIELEN-DKFIENYFNLNIADSGVHETCRQYLKCICILDSELVY--RKVVL 1072
             RS    + E  LE     +E +F   ++DS   ETCR Y+ C CIL  E  Y  R+VVL
Sbjct: 781  KRSTRFLETEKSLEGMGGLVEEFFTTTLSDSSNDETCRIYVSCDCILQQESTYKQREVVL 840

[Close]

BLAST of CmaCh11G003200 vs. TAIR 10
Match: AT3G17920.2 (Outer arm dynein light chain 1 protein )

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-102
Identity = 290/826 (35.11%), Postives = 387/826 (46.85%), Query Frame = 0


Query: 380  DALRHVFASRIVEVKNSAQWSRLSFVSCACNGLVLMDESLQLLPAVETLDLSRNKFAKVD 439
            DALRHVFASRI E+K+S QW++L+F+SCACN LVLMDESLQLLPAVE+LDLSRNKFAKVD
Sbjct: 18   DALRHVFASRIAEIKDSPQWNKLAFISCACNRLVLMDESLQLLPAVESLDLSRNKFAKVD 77

Query: 440  NLRKCVKLKHLDLGFNHLRTVASFTE---------------------------------- 499
            NLR+C KLKHLDLGFN LR ++  +E                                  
Sbjct: 78   NLRRCNKLKHLDLGFNQLRKISHLSEVSCHLVKLVLRNNALTTLRGIENLKSLEGLDVSF 137

Query: 500  -----------------------------------------------LKLDDKGICKREY 559
                                                           LKLD K I  RE+
Sbjct: 138  NLISDFSELEFLGSLSFLTDLWLEGNPICCARWYRAHVLSYVYLPNDLKLDGKHIGNREF 197

Query: 560  WKRKIIIASRQKRPASFGFYSPAKDGAQGEGSINRKKKTISRIASIQSEEESTYFCSDQE 619
            WKR++++  R+ +PAS+GFYSPA+D A  EGS  RKK  I R+ASI SEEESTY  SDQE
Sbjct: 198  WKRQVVVTRRKSQPASYGFYSPARDEADDEGSFTRKKTKIYRLASIDSEEESTYVNSDQE 257

Query: 620  SVCCDNETQSRGEAALSDNEVEAVDLMKKIEFIKKERSALWLREFEDWMDRAPPNTVNGN 679
            S  C+ ETQS+ E   SD+E +   L+ K+E +KKERS LWLREF++W+D    + V+ +
Sbjct: 258  SASCEPETQSKEENIKSDHEADVFGLICKVEQLKKERSVLWLREFKEWIDHPSEDFVDVS 317

Query: 680  INMAILHPGKENYLKSRKTAHHVGESSRYKSESIQASGDESSTNFVESDSSFVDIPSGLT 739
             N +     ++ Y+K+R    H GE+ RY                               
Sbjct: 318  KNGSSTDSEQKYYMKNRNGPKHHGETMRY------------------------------- 377

Query: 740  TSHYFGLNGTLGNDVEVPLSRTQRLDHKSSHLSSSFEGIDSPSTHVKSFHPSYNRFQGGQ 799
                     T G     PL   Q  D    H +   +G   P                  
Sbjct: 378  ---------TPG-----PLPSFQITDLNQKHQAFFLDG--KPD----------------- 437

Query: 800  AKVEDGSMSPLYAIDSISESHSSSAFPGSPPHYQEDILHRRHNFMEEILQLSAESYSVPS 859
               E+G+MS L A    S+  + S  P SPPHYQ+D+LHRR N +EEILQ+SA+SYSV S
Sbjct: 438  ---ENGNMSTLDA----SQDMTGSFSPSSPPHYQKDVLHRRQNLVEEILQISADSYSVAS 497

Query: 860  SDSYSSSSEDDIFPFEPLMQEVIQPTEDNSIRGSAEGQLSLDHSKGGTSKQCHEHLVGEN 919
            SD  SS SE++ +  E    E  Q T  + + G+     SL  S+   S       + ++
Sbjct: 498  SD--SSCSENENYDSEQSNPE--QDTLKDHLSGNRGEDTSLLDSQPEKSSIIKSWKIEDS 557

Query: 920  GLCHFDSSVDQLSSMQKSVLQGSSMQLPCNVFPADAHAYGTDHSIQ--YENSKLRNRESK 979
                   + + LS + KS L     Q+        +       ++    E S ++  E+ 
Sbjct: 558  FKA---KTTNFLSGLHKSELASGVNQIYRWFDKKQSKRKPKKRNVSPLEEYSFIKKGETS 617

Query: 980  RKVKKRVVS------LSGHTVVGMTDKHKGTSCDRSVSGADMEIELEN-DKFIENYFNLN 1039
             +    ++       +S H   G      G +  RS    + E  LE     +E +F   
Sbjct: 618  HRSDADIIDSCEDEYISDHFQEGSLT--TGCNSKRSTRFLETEKSLEGMGGLVEEFFTTT 677

Query: 1040 IADSGVHETCRQYLKCICILDSELVY--RKVVLLLSSRNKLYVLIVRAAGDGSGAILILS 1072
            ++DS   ETCR Y+ C CIL  E  Y  R+VVLLLSS+ KLYVL+V  + D   + L L 
Sbjct: 678  LSDSSNDETCRIYVSCDCILQQESTYKQREVVLLLSSQEKLYVLLVGVSTDLQESSLSLL 737

[Close]

BLAST of CmaCh11G003200 vs. TAIR 10
Match: AT3G17930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3007 (InterPro:IPR021562); Has 236 Blast hits to 236 proteins in 83 species: Archae - 0; Bacteria - 117; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 170.2 bits (430), Expect = 9.3e-42
Identity = 96/166 (57.83%), Postives = 119/166 (71.69%), Query Frame = 0


Query: 56  PIDFPTKGFFGTKKVVLTVPRDSSSSNASSSEDDPTN---QSKSTKTKVNNALLGIEISQ 115
           P+   T GF   KKV+        SS+    E         S ST+T+ ++A    +   
Sbjct: 26  PVGRQTTGFGAAKKVLYRFEGHRLSSSVEKGEKQRMRCRVSSNSTETEDDSA---TKTKT 85

Query: 116 TPFGYTRKDVLLIGLGVTVLGFGLKSGLEFAGFDPMQAGNVVQLVLVLGLTLAWISTYMF 175
           TPFGYTRKDV+LIG+GVT LG GL+SGLE+ G DP+QAGN VQL+LVLGLTL WISTY+F
Sbjct: 86  TPFGYTRKDVILIGVGVTALGIGLESGLEYVGVDPLQAGNAVQLILVLGLTLGWISTYIF 145

Query: 176 RVSNKDMTYAQQLRDYEDKVMEKRLESLTEAELVALLEQVEEEKSQ 219
           RV NK+MTYAQQLRDYE +VM+KRLESL+EAEL AL+ QV+EEK++
Sbjct: 146 RVGNKEMTYAQQLRDYESQVMQKRLESLSEAELEALMAQVDEEKTK 188

The following BLAST results are available for this feature:

BLAST of CmaCh11G003200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3TAA7	5.2e-13	30.17	Serine/threonine-protein kinase 11-interacting protein OS=Mus musculus OX=10090 ...	[more]
Q8N1F8	2.2e-11	30.47	Serine/threonine-protein kinase 11-interacting protein OS=Homo sapiens OX=9606 G...	[more]
Q5F479	1.0e-08	26.32	Serine/threonine-protein kinase 11-interacting protein OS=Gallus gallus OX=9031 ...	[more]
Q80TM9	1.9e-07	29.79	Nischarin OS=Mus musculus OX=10090 GN=Nisch PE=1 SV=2	[more]
Q9Y2I1	5.5e-07	29.29	Nischarin OS=Homo sapiens OX=9606 GN=NISCH PE=1 SV=3	[more]

BLAST of CmaCh11G003200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48540.2	2.4e-183	40.17	Outer arm dynein light chain 1 protein	[more]
AT1G48540.1	2.7e-182	39.98	Outer arm dynein light chain 1 protein	[more]
AT3G17920.1	5.6e-172	42.03	Outer arm dynein light chain 1 protein	[more]
AT3G17920.2	1.2e-102	35.11	Outer arm dynein light chain 1 protein	[more]
AT3G17930.1	9.3e-42	57.83	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021562	Protein of unknown function DUF3007	PFAM	PF11460	DUF3007	coord: 118..213 e-value: 1.2E-31 score: 108.8
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 179..468 e-value: 2.0E-13 score: 51.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 620..640
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..98
None	No IPR available	PANTHER	PTHR15454	NISCHARIN RELATED	coord: 465..1028 coord: 1028..1069 coord: 1071..1121
None	No IPR available	PANTHER	PTHR15454:SF51	OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN	coord: 465..1028 coord: 1028..1069
None	No IPR available	PANTHER	PTHR15454	NISCHARIN RELATED	coord: 234..464
None	No IPR available	PANTHER	PTHR15454:SF51	OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN	coord: 234..464 coord: 1071..1121
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 313..462
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 446..467 score: 7.850567

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G003200.1	CmaCh11G003200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding