Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACACGAAGAGTTAAAAGATTAAAAACCAAAATTTATTCATGAATTGTCAAAATTGCCACTCTAATTTCTCAGCTTGCAGCGGTTCTTCAAGCTCCAAACCCTTGAAATTTCATAACCCAAAACAGGCTAAGAATCTGTGTTGATAAAGTGGGCAAGAACTGCATCTATCTGTGCTTGTTGGGCTGCTTTCCATTTCGACTATCCCCTTTTCCCAGTCGTGGGGTATCGAGGTGTTGTGCGTTTATTCATCTATTTTCCTTTCTGGGTTACTGATAGTTTTGGATTTTGTGGATGATTTGATATCTATCGTGGTTTTGTCGAAATGGATTTTCAGGTGAAGAAGGCATGGTGATGAGTATTCAGTTTAATTCATGACACCAAAATGTTTCCTGTAAGGTTGGTTCTATTGGTTCTTCAGCATTATTTCATATGCTTCTCTTTATGTTGCTATTGACTGAAGGTGCATACTTCTGGGTGCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNAGCTATCCAATTTTTGGTTATCTTCTGATTCCAGACAATTGAGACTAGGAGGATGGTTGGTTTCTAATTGATTGATATAGAATGAATGGTTTCACGTTCTTTGATTACAATAATTGATTCTGAAGGAATGTTATTTCTAGTGTTTGTTGGATGAATTCCTGGGAAGGAACGGAAGTATGGTACTTTTACCATACGAAAGGTATCTTTTGTGATTTGGAAGAACTGAAAGTGTGAGATCCCCACGTCAGTTGGAGAGGAGAACGAAGTATTCCTTCTAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAACGTCGTGTGAGGCTAATGGTGATACGTAACGGGCCAAAACAGATAATATCTACTAGCAGTGGGCTTGACCTACTACAGAAAGAGAGCAACTTATTGTGAAAAGGGGAAAAGCTTGAGAACTATTTTATGATTTCTACATATTGATCTCGAAATATGTTTTGGGAATCCAAAATGATGTTGAAGGCAGAGCTCGATAGTTAGCGGTCGATGTAGTTTACGTATCCATATTATTTGGTTTCTCCCATTTCATGATGTCTTATTAGCAGGGATTTTTGGAGAAGGCACAAGAAGAAGATTTTAACCACAGCTGGTGTTATTGGAAGTGGGTATTTTCTCTACAAACAATATGATTACTACAGTAGAAGGCTTCAGGTTATTCAAAGAGAGCTAGATAATGAACGCGAAGCGGACGAGCTCATTAAAGCTCAGTTAAGAGATGCTTACTTTTTCGGTCCCTCGTTTTATCGGTATCGTTTTCTTCTTTAACTTTCGAGTTTGTTGGATGCGTGCTTGCAGAATACAAGCTCATTTTGAGCATATTCAGAGGATAGCTGATACCACGACACTGCCTCATGCTATACAACATTTACAAAGTCGGATAGAGGAAGATTTGGATCTTTCGCACCTGACCAAGCGGTTAATGATGGGGAAGGGTCAACCAAACACTTTGACATTAGCAGAAAAACTCGATTTATGGGAAAACCTCAAAATACTAAGTATGTAACGATCTCGCTTTCGTGTTCATATTTGGATCTTTCGTGTTCATAGATTTAGATCACCTTGCTTGGTATGCATTTTTCCAGGCTTCACAAAGATGGTGATATCACTCTGGGCAATAACTGTTTTAAGCTTATACATTAGAGTTCAAGTCAACATCTTAGGAAGACACATGTACGTTGATACTGCCCGTGGTCTCGGTAGCTCCCATTTCCTCGTAAGGCCTGCTGTTTTCGACTATCGTACTTGTTTGAACTGTTTTTATCGCTGTCACTCTTGGCATTACTACCTTAGTCATTTTACTATTTATTTGGTTTTTCTTTTTTAAAAAAATTTTAATTTCTTATATAGAAGTACTGATGACATTTTCCGTGAGTACCCATTATATTTTTCTATTGACCTTTGATAAGGAGCTCCATGATTTGCGCCTATCGGCTGCTAGGGTGTTGTCATCCTTCACTTTAGCTAAAAATGTCTGCAGTTTAGCTTCAAACTAAAGAAAAAATGTCTACACATTCAGGGTCATCGTTGTAGACTTGTTGTGTGTTGACTGTATTTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAACATTCCTTATAAAGATGTGGAAACCTCTCTCTAGAAGACGCGTTTTAAAACCGTGAGACTGACGACGATACATAATGGGTTAGAGCAGACAATATCTGTTAGCGGTGGGTTTAGACTGTTACAGATGGTATCAGAACCAGACATTTGGGCAATGTGCCAGCGAGGATGCTGGGCCCCAAGAGGGGTGAATTGTGGGATCCTACGTCGGTTGAAGAGGGGAACAAAGCATTCCTTATGAGGGTGTGAAAACCTCTCCCTATCAGACGTGTTTTAAAACCGTGAGGCTAAAGACAATACATAATTGGCCAAAGCGGACAATATTCTTTAGCGGTGGGTTTGGGCTGTTACAATATTTTGCATTCCATTTTTTTCCGTTCATCAAGTGGAATGGCCATGTTACGCCAATAAATGAGTAGGTGATGTAGGCAACGTGAATGTTGTTCCGTTTTCCAGCTATAACTTCTAAACATGATATGAGATTTTAAATTTATTTGATATCAAACTTGAAAGCTGTGTAATGCGTGCTATTATTAGTTCTTTCTTGACTCACTGTCTTTTCTCTGATGTTAGTCCTTGTGATTTCTGATTCCACAGGAGGAGGCTGAGCTCGTCGATAGGAACGACGAGCAGAAATTTCTGGCTATCTCTGATTTTCTCTCTAATTATGGTCTGAATACCTTAATTCCTAGAATGCAGGTAGCAGTAGCAGAAGTTCTCAAGAGGTAAGGGGCTATGTTGATTTCGTCGACTATGTCGATGCTTTCTCAGATGTGATTAGTATTCTTTGTCGATTTTCTTGGTTGCAGTAAACAGTTGCGAGATGTCTTTGATACAACTACGCTTCGCGAAACTACTATACGTATGATAAAAATCTTCATGAGCACGGGACGTCCCCATCATTGGTTGGACTACTTGATGCCTGAGGACAATCAATCTAGTATTACCGGCACGCTCTCTACAGATGACGATGCAACTGTCACAAATATCAATAAGTTTGACCAACTTATGATGGAGACTCGAGCAGTTCTGCTAAGGTACGAGGATTATAAATCAAATGTCACCATAATGATTATAGACCGTCTCGTTGGTTTAACAGTTCAAGCCTACTCCTTGCAGATATTGTTCTTTTTAGTTTTTCCTTTCTCTTAAGGTTTTAAAATGTGTCTGTTAGGGAGAGGTTTCTACACCCATATAAAGAACGTTTCGTTCTCCTCTCCAACCAACGTGGGATCTCACAGTCCACCCCTTTTGGGGTTCAGCGTCCTCGTTAGCACTCGTTCCCTTCTCCAATCAATGTAGGATCCCCCAATTCACCTCTCTTCAGGGTCCAGCGTCCTTGCTGGCACACCGCTTCGTGTCCACCCCCTTCAGGGCTAAGCCTCCATGCTGGCACATCGCTCGGTGTTTGACTCTCATACCATTTGTAACGGCCTAAGCCCATCATCAGCAAATGGCTTTTCTTTATGAGAGAGGTTTCCACACTCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCGCAATCCACCTCCCTTCGGGGCCCAGCGTCCTTGCTGGCACATCGCCTCGTGTCCACTCCAATCCACCCCCCCCCCTCGGGGCTCAGGCTCCTCGCTGGAATATCGCCCAGTGTCTGCCTCTGATACCATTTGTAACAGCTGAATCCCACCGCCAGTAGATATTGTCCTCTTTGGGCTTTCCGTTCCGGGCTTTCACTCAAGTTTTTAAAAAATGCGTATGCTCGGGAGAGGTTTCCATACCCTTGTAAAAAATGTTTCGTTCTTTCGTTCTCCTCCCCAACCGATTTGGGATCTAATAGTTCATGTTGAATGCAATATCATCACTCTCTAGACAAATTTGTAAACTATCAACCACGTTTCGTTCAGTTAACAATATATGATATTTTCTTCCTCTTTTTATGGGTTCAGTGCCGAATTTGGGAACGTCGTCGAGAGGTCGTTAGAAGTAGGAGTGGATGGGTTGATGGAAGAAATGGAGGGTTCAGTTGGTGGAGGCGGCAGCAGCAGTACATCAGGGACACCACTGGCTAGGCTTGTGCCAAGAGTTTCCCAGATGGGGCCATTGCTCCTTGAAGATCCAAGAAAAACCAGATTCATCCAACTGATCAGAGGTATACCAGAAGTGGAAATCTTCTTTACTCTCCTCTATGCGAACACCATGCCTGCCTCTTAGAAACAAACACCTTAGCATGGGTTGCTTGCTGCACATTCTTCCCACTTCATTAGGTTCTTGTTTACACATCATTGTAAAAAGTCTGGTTTCCTTCCTTTTGGCTTGGCTTGGCTTGGCTTGGATCGGATCCTTACAAACATTAAAACGTTTGGAAAGAATCTGGAAAGAATCTCTGAGGTGGTGATAGGCGATATTTTTTTTAAAATA
mRNA sequence
GAACACGAAGAGTTAAAAGATTAAAAACCAAAATTTATTCATGAATTGTCAAAATTGCCACTCTAATTTCTCAGCTTGCAGCGGTTCTTCAAGCTCCAAACCCTTGAAATTTCATAACCCAAAACAGGCTAAGAATCTGTGTTGATAAAGTGGGCAAGAACTGCATCTATCTGTGCTTGTTGGGCTGCTTTCCATTTCGACTATCCCCTTTTCCCAGTCGTGGGGTATCGAGGTGTTGTGAAGAAGGCATGGTGATGAGTATTCAGTTTAATTCATGACACCAAAATGTTTCCTGTAAGGGATTTTTGGAGAAGGCACAAGAAGAAGATTTTAACCACAGCTGGTGTTATTGGAAGTGGGTATTTTCTCTACAAACAATATGATTACTACAGTAGAAGGCTTCAGGTTATTCAAAGAGAGCTAGATAATGAACGCGAAGCGGACGAGCTCATTAAAGCTCAAATACAAGCTCATTTTGAGCATATTCAGAGGATAGCTGATACCACGACACTGCCTCATGCTATACAACATTTACAAAGTCGGATAGAGGAAGATTTGGATCTTTCGCACCTGACCAAGCGGTTAATGATGGGGAAGGGTCAACCAAACACTTTGACATTAGCAGAAAAACTCGATTTATGGGAAAACCTCAAAATACTAAGCTTCACAAAGATGGTGATATCACTCTGGGCAATAACTGTTTTAAGCTTATACATTAGAGTTCAAGTCAACATCTTAGGAAGACACATGTACGTTGATACTGCCCGTGGTCTCGGTAGCTCCCATTTCCTCGAGGAGGCTGAGCTCGTCGATAGGAACGACGAGCAGAAATTTCTGGCTATCTCTGATTTTCTCTCTAATTATGGTCTGAATACCTTAATTCCTAGAATGCAGGTAGCAGTAGCAGAAGTTCTCAAGAGTAAACAGTTGCGAGATGTCTTTGATACAACTACGCTTCGCGAAACTACTATACGTATGATAAAAATCTTCATGAGCACGGGACGTCCCCATCATTGGTTGGACTACTTGATGCCTGAGGACAATCAATCTAGTATTACCGGCACGCTCTCTACAGATGACGATGCAACTGTCACAAATATCAATAAGTTTGACCAACTTATGATGGAGACTCGAGCAGTTCTGCTAAGTGCCGAATTTGGGAACGTCGTCGAGAGGTCGTTAGAAGTAGGAGTGGATGGGTTGATGGAAGAAATGGAGGGTTCAGTTGGTGGAGGCGGCAGCAGCAGTACATCAGGGACACCACTGGCTAGGCTTGTGCCAAGAGTTTCCCAGATGGGGCCATTGCTCCTTGAAGATCCAAGAAAAACCAGATTCATCCAACTGATCAGAGGTATACCAGAAGTGGAAATCTTCTTTACTCTCCTCTATGCGAACACCATGCCTGCCTCTTAGAAACAAACACCTTAGCATGGGTTGCTTGCTGCACATTCTTCCCACTTCATTAGGTTCTTGTTTACACATCATTGTAAAAAGTCTGGTTTCCTTCCTTTTGGCTTGGCTTGGCTTGGCTTGGATCGGATCCTTACAAACATTAAAACGTTTGGAAAGAATCTGGAAAGAATCTCTGAGGTGGTGATAGGCGATATTTTTTTTAAAATA
Coding sequence (CDS)
ATGTTTCCTGTAAGGGATTTTTGGAGAAGGCACAAGAAGAAGATTTTAACCACAGCTGGTGTTATTGGAAGTGGGTATTTTCTCTACAAACAATATGATTACTACAGTAGAAGGCTTCAGGTTATTCAAAGAGAGCTAGATAATGAACGCGAAGCGGACGAGCTCATTAAAGCTCAAATACAAGCTCATTTTGAGCATATTCAGAGGATAGCTGATACCACGACACTGCCTCATGCTATACAACATTTACAAAGTCGGATAGAGGAAGATTTGGATCTTTCGCACCTGACCAAGCGGTTAATGATGGGGAAGGGTCAACCAAACACTTTGACATTAGCAGAAAAACTCGATTTATGGGAAAACCTCAAAATACTAAGCTTCACAAAGATGGTGATATCACTCTGGGCAATAACTGTTTTAAGCTTATACATTAGAGTTCAAGTCAACATCTTAGGAAGACACATGTACGTTGATACTGCCCGTGGTCTCGGTAGCTCCCATTTCCTCGAGGAGGCTGAGCTCGTCGATAGGAACGACGAGCAGAAATTTCTGGCTATCTCTGATTTTCTCTCTAATTATGGTCTGAATACCTTAATTCCTAGAATGCAGGTAGCAGTAGCAGAAGTTCTCAAGAGTAAACAGTTGCGAGATGTCTTTGATACAACTACGCTTCGCGAAACTACTATACGTATGATAAAAATCTTCATGAGCACGGGACGTCCCCATCATTGGTTGGACTACTTGATGCCTGAGGACAATCAATCTAGTATTACCGGCACGCTCTCTACAGATGACGATGCAACTGTCACAAATATCAATAAGTTTGACCAACTTATGATGGAGACTCGAGCAGTTCTGCTAAGTGCCGAATTTGGGAACGTCGTCGAGAGGTCGTTAGAAGTAGGAGTGGATGGGTTGATGGAAGAAATGGAGGGTTCAGTTGGTGGAGGCGGCAGCAGCAGTACATCAGGGACACCACTGGCTAGGCTTGTGCCAAGAGTTTCCCAGATGGGGCCATTGCTCCTTGAAGATCCAAGAAAAACCAGATTCATCCAACTGATCAGAGGTATACCAGAAGTGGAAATCTTCTTTACTCTCCTCTATGCGAACACCATGCCTGCCTCTTAG
Protein sequence
MFPVRDFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELIKAQIQAHFEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTARGLGSSHFLEEAELVDRNDEQKFLAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRPHHWLDYLMPEDNQSSITGTLSTDDDATVTNINKFDQLMMETRAVLLSAEFGNVVERSLEVGVDGLMEEMEGSVGGGGSSSTSGTPLARLVPRVSQMGPLLLEDPRKTRFIQLIRGIPEVEIFFTLLYANTMPAS
Homology
BLAST of CmaCh11G003010 vs. ExPASy Swiss-Prot
Match:
Q8S9K7 (Peroxisome biogenesis protein 3-2 OS=Arabidopsis thaliana OX=3702 GN=PEX3-2 PE=2 SV=1)
HSP 1 Score: 395.2 bits (1014), Expect = 8.2e-109
Identity = 205/368 (55.71%), Postives = 277/368 (75.27%), Query Frame = 0
Query: 4 VRDFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELIKAQIQAH 63
VR FWR+H++K+L TAG +GSGY LYK Y+ ++RRL ++REL +ERE DE+IK Q++AH
Sbjct: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
Query: 64 FEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENLK 123
FE IQ I D+TTLPHA+Q L RI E++D+SH+ RL GKG L+ EKL LW+ LK
Sbjct: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELK 123
Query: 124 ILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTARGLGSSHFLEEAELVDRNDEQKF 183
ILSFT+MV+SLW++T+LSLYIRVQVNILGRH+YVDTAR LGSSH LEE +L+DR+DEQKF
Sbjct: 124 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 183
Query: 184 LAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRPHH 243
L+ +DFL + +LI MQ + EVLK KQL+DV T L+ET ++++ +FMSTG PHH
Sbjct: 184 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 243
Query: 244 WLDYL-MPEDNQSSITGTLSTDDDATVTNINKFDQLMMETRAVLLSAEFGNVVERSLEVG 303
W+DYL MP+D + S T + S+D+ ++KF QLM+ETR VL+S EF N+VE SL+
Sbjct: 244 WVDYLMMPQDTKLSRTTSDSSDE-----AVSKFHQLMVETREVLISTEFTNIVEISLKCF 303
Query: 304 VDGLMEEMEGSVGGGGSSSTSGTPLARLVPRVSQMGPLLLEDPRKTRFIQLIRGIPEVEI 363
D L+EEME GG + +G PLA+++P++ + ++ +P K RF+Q+IR +PEV++
Sbjct: 304 TDVLVEEMETQTEAGGLA--TGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKL 361
Query: 364 FFTLLYAN 371
FFTLLYAN
Sbjct: 364 FFTLLYAN 361
BLAST of CmaCh11G003010 vs. ExPASy Swiss-Prot
Match:
Q8LDG7 (Peroxisome biogenesis protein 3-1 OS=Arabidopsis thaliana OX=3702 GN=PEX3-1 PE=2 SV=2)
HSP 1 Score: 385.2 bits (988), Expect = 8.5e-106
Identity = 205/367 (55.86%), Postives = 269/367 (73.30%), Query Frame = 0
Query: 4 VRDFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELIKAQIQAH 63
VR WR+H++KIL T +GSGY LYK Y+ ++R+L ++REL NERE DE+IK Q++AH
Sbjct: 4 VRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAH 63
Query: 64 FEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENLK 123
F++IQ IADTTTLPHAI HL SR+ E++D+S + +L GKG L +EKL LW LK
Sbjct: 64 FDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELK 123
Query: 124 ILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTARGLGSSHFLEEAELVDRNDEQKF 183
ILSFT+MV+SLW++T+LSLYIRVQVNILGRH+Y+DTARGLGSSH L+E +L++R+DEQKF
Sbjct: 124 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 183
Query: 184 LAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRPHH 243
L +DFL+ G+ +LI MQ AV EVLK KQL+DV T+ LRET +R++ +FMSTG PHH
Sbjct: 184 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 243
Query: 244 WLDYLMPEDNQSSITGTLSTDDDATVTNINKFDQLMMETRAVLLSAEFGNVVERSLEVGV 303
W+DYLM +Q + T S+ DATVT KF L+ ETR VL S +F NV E SL+
Sbjct: 244 WVDYLMM--SQDATTDVSSS--DATVT---KFHLLITETREVLTSNDFSNVAEISLKCCA 303
Query: 304 DGLMEEMEGSVGGGGSSSTSGTPLARLVPRVSQMGPLLLEDPRKTRFIQLIRGIPEVEIF 363
L+EEME G +G LA+L+P++ + P + +P K RF+QLIR +PEV++F
Sbjct: 304 VALVEEMETQTG-----LATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLF 355
Query: 364 FTLLYAN 371
FTLLYAN
Sbjct: 364 FTLLYAN 355
BLAST of CmaCh11G003010 vs. ExPASy Swiss-Prot
Match:
Q9JJK3 (Peroxisomal biogenesis factor 3 OS=Cricetulus longicaudatus OX=10030 GN=PEX3 PE=2 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 2.6e-22
Identity = 110/386 (28.50%), Postives = 192/386 (49.74%), Query Frame = 0
Query: 6 DFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELI-KAQIQAHF 65
+F +RHKKK + V+G Y L K Y ++++ IQ EREA E I +A+ Q HF
Sbjct: 7 NFLKRHKKKCIFLGTVLGGVYILGK---YGQKKIREIQ-----EREAAEYIAQARRQYHF 66
Query: 66 EHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENLKI 125
E QR + T L + L+ + + L+ LT L K +P + KL++WE+LKI
Sbjct: 67 ESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALL---KNRP-----SNKLEIWEDLKI 126
Query: 126 LSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTAR-GLGSSHFLEEAELVDRNDEQKF 185
+SFT+ ++++++ +L + +RVQ+NI+G ++Y+D A G + L ++ +Q++
Sbjct: 127 ISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNATVGKNGTTVLAPPDV-----QQQY 186
Query: 186 LAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRPHH 245
L+ L GL L+ ++ AV +L S L+ L E ++ I+I + R
Sbjct: 187 LSSIQHLLGDGLTELVTVIKQAVQRILGSVSLKHSLSLLDL-EQKLKEIRILVEQHRSPS 246
Query: 246 WLD----------YLMPEDNQSSITGTLSTDDDATVTNINKFDQLMMETRAVLLSAEFGN 305
W+D Y+MP D ++ + +T I +L+ ETR +L S +F
Sbjct: 247 WIDKDVSKSSLCQYMMP-DEETPLAAQAYGLSPRDITTI----KLLNETRDMLESPDFST 306
Query: 306 VVERSLEVGVDGLMEEM-------EGSVGGG---GSSSTSGTPLARLVPRVS-QMGPLLL 365
V+ L G L++ M E + G S S+ PLA+++P V+ Q+ +
Sbjct: 307 VLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSINSLSSVSLPLAKIIPIVNGQIHSVCS 362
Query: 366 EDPRKTRFIQLIRGIPEVEIFFTLLY 369
+ P + F+Q + + +V+ F +Y
Sbjct: 367 DTP--SHFVQDLLMMEQVKDFAANVY 362
BLAST of CmaCh11G003010 vs. ExPASy Swiss-Prot
Match:
Q60HE1 (Peroxisomal biogenesis factor 3 OS=Macaca fascicularis OX=9541 GN=PEX3 PE=2 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 7.6e-22
Identity = 111/390 (28.46%), Postives = 193/390 (49.49%), Query Frame = 0
Query: 4 VRDFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELI-KAQIQA 63
V +F +RHKKK + V+G Y L K Y ++++ IQ EREA E I +A+ Q
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGK---YGQKKIREIQ-----EREAAEYIAQARRQY 64
Query: 64 HFEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENL 123
HFE QR + T L + L+ + + L+ LT L K +P + KL++WE+L
Sbjct: 65 HFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALL---KNRP-----SNKLEIWEDL 124
Query: 124 KILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTAR-GLGSSHFLEEAELVDRNDEQ 183
KI+SFT+ ++++++ +L + +RVQ+NI+G ++Y+D A G + L ++ +Q
Sbjct: 125 KIISFTRSIVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTILAPPDV-----QQ 184
Query: 184 KFLAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRP 243
++L+ L GL LI ++ AV ++L S L+ L E ++ I+ + +
Sbjct: 185 QYLSSIQHLLGDGLTELITVIKQAVQKILGSVSLKHSLSLLDL-EQKLKEIRNLVEQHKS 244
Query: 244 HHWLD----------YLMPEDNQSSITGT--LSTDDDATVTNINKFDQLMMETRAVLLSA 303
W++ Y+MP++ LS D T+ +L+ ETR +L S
Sbjct: 245 SSWINKDGSKSLLCHYMMPDEETPLAVQACGLSPRDITTI-------KLLNETRDMLESP 304
Query: 304 EFGNVVERSLEVGVDGLMEEM-------EGSVGGGGSS---STSGTPLARLVPRVS-QMG 363
+F V+ L G L++ M E + G S S+ PLA+++P V+ Q+
Sbjct: 305 DFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIH 362
Query: 364 PLLLEDPRKTRFIQLIRGIPEVEIFFTLLY 369
+ E P + F+Q + + +V+ F +Y
Sbjct: 365 SVCSETP--SHFVQDLLTMEQVKDFAANVY 362
BLAST of CmaCh11G003010 vs. ExPASy Swiss-Prot
Match:
P56589 (Peroxisomal biogenesis factor 3 OS=Homo sapiens OX=9606 GN=PEX3 PE=1 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 1.3e-21
Identity = 112/390 (28.72%), Postives = 192/390 (49.23%), Query Frame = 0
Query: 4 VRDFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELI-KAQIQA 63
V +F +RHKKK + V+G Y L K Y ++++ IQ EREA E I +A+ Q
Sbjct: 5 VWNFLKRHKKKCIFLGTVLGGVYILGK---YGQKKIREIQ-----EREAAEYIAQARRQY 64
Query: 64 HFEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENL 123
HFE QR + T L + L+ + + L+ LT L K +P + KL++WE+L
Sbjct: 65 HFESNQRTCNMTVL-SMLPTLREALMQQLNSESLTALL---KNRP-----SNKLEIWEDL 124
Query: 124 KILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTAR-GLGSSHFLEEAELVDRNDEQ 183
KI+SFT+ +++++ +L + +RVQ+NI+G ++Y+D A G + L ++ +Q
Sbjct: 125 KIISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTILAPPDV-----QQ 184
Query: 184 KFLAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRP 243
++L+ L GL LI ++ AV +VL S L+ L E ++ I+ + +
Sbjct: 185 QYLSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDL-EQKLKEIRNLVEQHKS 244
Query: 244 HHWLD----------YLMPEDNQSSITGT--LSTDDDATVTNINKFDQLMMETRAVLLSA 303
W++ Y+MP++ LS D T+ +L+ ETR +L S
Sbjct: 245 SSWINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTI-------KLLNETRDMLESP 304
Query: 304 EFGNVVERSLEVGVDGLMEEM-------EGSVGGGGSS---STSGTPLARLVPRVS-QMG 363
+F V+ L G L++ M E + G S S+ PLA+++P V+ Q+
Sbjct: 305 DFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIH 362
Query: 364 PLLLEDPRKTRFIQLIRGIPEVEIFFTLLY 369
+ E P + F+Q + + +V+ F +Y
Sbjct: 365 SVCSETP--SHFVQDLLTMEQVKDFAANVY 362
BLAST of CmaCh11G003010 vs. TAIR 10
Match:
AT1G48635.1 (peroxin 3 )
HSP 1 Score: 395.2 bits (1014), Expect = 5.9e-110
Identity = 205/368 (55.71%), Postives = 277/368 (75.27%), Query Frame = 0
Query: 4 VRDFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELIKAQIQAH 63
VR FWR+H++K+L TAG +GSGY LYK Y+ ++RRL ++REL +ERE DE+IK Q++AH
Sbjct: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
Query: 64 FEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENLK 123
FE IQ I D+TTLPHA+Q L RI E++D+SH+ RL GKG L+ EKL LW+ LK
Sbjct: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELK 123
Query: 124 ILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTARGLGSSHFLEEAELVDRNDEQKF 183
ILSFT+MV+SLW++T+LSLYIRVQVNILGRH+YVDTAR LGSSH LEE +L+DR+DEQKF
Sbjct: 124 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLEEVDLIDRDDEQKF 183
Query: 184 LAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRPHH 243
L+ +DFL + +LI MQ + EVLK KQL+DV T L+ET ++++ +FMSTG PHH
Sbjct: 184 LSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHH 243
Query: 244 WLDYL-MPEDNQSSITGTLSTDDDATVTNINKFDQLMMETRAVLLSAEFGNVVERSLEVG 303
W+DYL MP+D + S T + S+D+ ++KF QLM+ETR VL+S EF N+VE SL+
Sbjct: 244 WVDYLMMPQDTKLSRTTSDSSDE-----AVSKFHQLMVETREVLISTEFTNIVEISLKCF 303
Query: 304 VDGLMEEMEGSVGGGGSSSTSGTPLARLVPRVSQMGPLLLEDPRKTRFIQLIRGIPEVEI 363
D L+EEME GG + +G PLA+++P++ + ++ +P K RF+Q+IR +PEV++
Sbjct: 304 TDVLVEEMETQTEAGGLA--TGKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKL 361
Query: 364 FFTLLYAN 371
FFTLLYAN
Sbjct: 364 FFTLLYAN 361
BLAST of CmaCh11G003010 vs. TAIR 10
Match:
AT3G18160.1 (peroxin 3-1 )
HSP 1 Score: 385.2 bits (988), Expect = 6.1e-107
Identity = 205/367 (55.86%), Postives = 269/367 (73.30%), Query Frame = 0
Query: 4 VRDFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELIKAQIQAH 63
VR WR+H++KIL T +GSGY LYK Y+ ++R+L ++REL NERE DE+IK Q++AH
Sbjct: 4 VRGLWRKHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAH 63
Query: 64 FEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENLK 123
F++IQ IADTTTLPHAI HL SR+ E++D+S + +L GKG L +EKL LW LK
Sbjct: 64 FDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELK 123
Query: 124 ILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTARGLGSSHFLEEAELVDRNDEQKF 183
ILSFT+MV+SLW++T+LSLYIRVQVNILGRH+Y+DTARGLGSSH L+E +L++R+DEQKF
Sbjct: 124 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKF 183
Query: 184 LAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRPHH 243
L +DFL+ G+ +LI MQ AV EVLK KQL+DV T+ LRET +R++ +FMSTG PHH
Sbjct: 184 LTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHH 243
Query: 244 WLDYLMPEDNQSSITGTLSTDDDATVTNINKFDQLMMETRAVLLSAEFGNVVERSLEVGV 303
W+DYLM +Q + T S+ DATVT KF L+ ETR VL S +F NV E SL+
Sbjct: 244 WVDYLMM--SQDATTDVSSS--DATVT---KFHLLITETREVLTSNDFSNVAEISLKCCA 303
Query: 304 DGLMEEMEGSVGGGGSSSTSGTPLARLVPRVSQMGPLLLEDPRKTRFIQLIRGIPEVEIF 363
L+EEME G +G LA+L+P++ + P + +P K RF+QLIR +PEV++F
Sbjct: 304 VALVEEMETQTG-----LATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLF 355
Query: 364 FTLLYAN 371
FTLLYAN
Sbjct: 364 FTLLYAN 355
BLAST of CmaCh11G003010 vs. TAIR 10
Match:
AT1G48635.2 (peroxin 3 )
HSP 1 Score: 377.1 bits (967), Expect = 1.7e-104
Identity = 205/404 (50.74%), Postives = 277/404 (68.56%), Query Frame = 0
Query: 4 VRDFWRRHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELIKAQIQAH 63
VR FWR+H++K+L TAG +GSGY LYK Y+ ++RRL ++REL +ERE DE+IK Q++AH
Sbjct: 4 VRGFWRKHRRKVLVTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAH 63
Query: 64 FEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENLK 123
FE IQ I D+TTLPHA+Q L RI E++D+SH+ RL GKG L+ EKL LW+ LK
Sbjct: 64 FESIQMIVDSTTLPHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELK 123
Query: 124 ILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTARGLGSSHFL-------------- 183
ILSFT+MV+SLW++T+LSLYIRVQVNILGRH+YVDTAR LGSSH L
Sbjct: 124 ILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYVDTARALGSSHLLCTLLISSPTSYFSG 183
Query: 184 ----------------------EEAELVDRNDEQKFLAISDFLSNYGLNTLIPRMQVAVA 243
EE +L+DR+DEQKFL+ +DFL + +LI MQ +
Sbjct: 184 KLTGCSVKNFSRLPFKATAACPEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAE 243
Query: 244 EVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRPHHWLDYL-MPEDNQSSITGTLSTDDD 303
EVLK KQL+DV T L+ET ++++ +FMSTG PHHW+DYL MP+D + S T + S+D+
Sbjct: 244 EVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTKLSRTTSDSSDE- 303
Query: 304 ATVTNINKFDQLMMETRAVLLSAEFGNVVERSLEVGVDGLMEEMEGSVGGGGSSSTSGTP 363
++KF QLM+ETR VL+S EF N+VE SL+ D L+EEME GG + +G P
Sbjct: 304 ----AVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLA--TGKP 363
Query: 364 LARLVPRVSQMGPLLLEDPRKTRFIQLIRGIPEVEIFFTLLYAN 371
LA+++P++ + ++ +P K RF+Q+IR +PEV++FFTLLYAN
Sbjct: 364 LAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYAN 397
BLAST of CmaCh11G003010 vs. TAIR 10
Match:
AT3G18160.3 (peroxin 3-1 )
HSP 1 Score: 375.9 bits (964), Expect = 3.7e-104
Identity = 201/361 (55.68%), Postives = 265/361 (73.41%), Query Frame = 0
Query: 10 RHKKKILTTAGVIGSGYFLYKQYDYYSRRLQVIQRELDNEREADELIKAQIQAHFEHIQR 69
+H++KIL T +GSGY LYK Y+ ++R+L ++REL NERE DE+IK Q++AHF++IQ
Sbjct: 28 KHRRKILVTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHFDNIQM 87
Query: 70 IADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAEKLDLWENLKILSFTK 129
IADTTTLPHAI HL SR+ E++D+S + +L GKG L +EKL LW LKILSFT+
Sbjct: 88 IADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELKILSFTR 147
Query: 130 MVISLWAITVLSLYIRVQVNILGRHMYVDTARGLGSSHFLEEAELVDRNDEQKFLAISDF 189
MV+SLW++T+LSLYIRVQVNILGRH+Y+DTARGLGSSH L+E +L++R+DEQKFL +DF
Sbjct: 148 MVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDLIERDDEQKFLTSADF 207
Query: 190 LSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKIFMSTGRPHHWLDYLM 249
L+ G+ +LI MQ AV EVLK KQL+DV T+ LRET +R++ +FMSTG PHHW+DYLM
Sbjct: 208 LATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHHWVDYLM 267
Query: 250 PEDNQSSITGTLSTDDDATVTNINKFDQLMMETRAVLLSAEFGNVVERSLEVGVDGLMEE 309
+Q + T S+ DATVT KF L+ ETR VL S +F NV E SL+ L+EE
Sbjct: 268 M--SQDATTDVSSS--DATVT---KFHLLITETREVLTSNDFSNVAEISLKCCAVALVEE 327
Query: 310 MEGSVGGGGSSSTSGTPLARLVPRVSQMGPLLLEDPRKTRFIQLIRGIPEVEIFFTLLYA 369
ME G +G LA+L+P++ + P + +P K RF+QLIR +PEV++FFTLLYA
Sbjct: 328 METQTG-----LATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYA 373
Query: 370 N 371
N
Sbjct: 388 N 373
BLAST of CmaCh11G003010 vs. TAIR 10
Match:
AT3G18160.2 (peroxin 3-1 )
HSP 1 Score: 321.6 bits (823), Expect = 8.2e-88
Identity = 174/316 (55.06%), Postives = 230/316 (72.78%), Query Frame = 0
Query: 55 LIKAQIQAHFEHIQRIADTTTLPHAIQHLQSRIEEDLDLSHLTKRLMMGKGQPNTLTLAE 114
++ +++AHF++IQ IADTTTLPHAI HL SR+ E++D+S + +L GKG L +E
Sbjct: 1 MLYVRMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSE 60
Query: 115 KLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMYVDTARGLGSSHFLEEAEL 174
KL LW LKILSFT+MV+SLW++T+LSLYIRVQVNILGRH+Y+DTARGLGSSH L+E +L
Sbjct: 61 KLQLWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYIDTARGLGSSHLLDELDL 120
Query: 175 VDRNDEQKFLAISDFLSNYGLNTLIPRMQVAVAEVLKSKQLRDVFDTTTLRETTIRMIKI 234
++R+DEQKFL +DFL+ G+ +LI MQ AV EVLK KQL+DV T+ LRET +R++ +
Sbjct: 121 IERDDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDV 180
Query: 235 FMSTGRPHHWLDYLMPEDNQSSITGTLSTDDDATVTNINKFDQLMMETRAVLLSAEFGNV 294
FMSTG PHHW+DYLM +Q + T S+ DATVT KF L+ ETR VL S +F NV
Sbjct: 181 FMSTGSPHHWVDYLMM--SQDATTDVSSS--DATVT---KFHLLITETREVLTSNDFSNV 240
Query: 295 VERSLEVGVDGLMEEMEGSVGGGGSSSTSGTPLARLVPRVSQMGPLLLEDPRKTRFIQLI 354
E SL+ L+EEME G +G LA+L+P++ + P + +P K RF+QLI
Sbjct: 241 AEISLKCCAVALVEEMETQTG-----LATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLI 300
Query: 355 RGIPEVEIFFTLLYAN 371
R +PEV++FFTLLYAN
Sbjct: 301 RDLPEVKLFFTLLYAN 301
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8S9K7 | 8.2e-109 | 55.71 | Peroxisome biogenesis protein 3-2 OS=Arabidopsis thaliana OX=3702 GN=PEX3-2 PE=2... | [more] |
Q8LDG7 | 8.5e-106 | 55.86 | Peroxisome biogenesis protein 3-1 OS=Arabidopsis thaliana OX=3702 GN=PEX3-1 PE=2... | [more] |
Q9JJK3 | 2.6e-22 | 28.50 | Peroxisomal biogenesis factor 3 OS=Cricetulus longicaudatus OX=10030 GN=PEX3 PE=... | [more] |
Q60HE1 | 7.6e-22 | 28.46 | Peroxisomal biogenesis factor 3 OS=Macaca fascicularis OX=9541 GN=PEX3 PE=2 SV=1 | [more] |
P56589 | 1.3e-21 | 28.72 | Peroxisomal biogenesis factor 3 OS=Homo sapiens OX=9606 GN=PEX3 PE=1 SV=1 | [more] |