CmaCh11G002700 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G002700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAC domain-containing protein
Location	Cma_Chr11: 1368848 .. 1371938 (+)
RNA-Seq Expression	CmaCh11G002700
Synteny	CmaCh11G002700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCCGACGACACGAAAAGAATCGATAGCGTTCTTCAATGGATGATAATCTCCCTCCTGGATTCAGATTCCACCCTACTGATGAAGAACTCATTTCTTATTACCTCACTCAAAAGATTTCTGATTCTTCTTTTACCTCTAAAGTAATTGCGGTCGTCGATCTCAACAAGAACGAGCCTTGGGATCTCCCAGGTATATTATATTACATTTCTAGCGTTTTAGATAGGGGTGTACATCTAACCCGACAACCCGGACCAACTCAACTCAAATTATAAGAGTTGGGATGAGTTGGGTTACTTTTCCTAAACCCGAATTGTCTCGATTCGGAAGTGTTTCATCGTGTTTTTGTATGATTCAGCCAAAGCTTCGATGGGAGAGAAAGAATGGTACTTTTTCAGCTTGAGAGATCGAAAGTATCCAACAGGGCTTCGAACAAATCGAGCCACAGAAGCTGGCTATTGGAAGACAACAGGAAAGGACAAGGAAATCTTTGGAGGTGGTGCGTTGGTTGGAATGAAAAAAACCCTTGTCTTTTACCAGGGAAGAGCCCCTAGAGGCGAGAAAAGTAATTGGGTTATGCACGAATACCGCCTCGAAAACAACCATTTTTTCAAGCCTTCCAAGGTTCGTAGTACTAAATTATAGTTTACTATATGATATTTTCATTTATTACTATTTCCATATTCTTGTAATTTATTTGATTATAAAGAGAACTTTTCGTACTTTTTCCTAGGAAGAATGGGTAGTTTGCAGGGTGTTTCAGAAGCAAAATCCACCAAAAAAGCCACAGCAATCATCGTCCTCTCAGCCTTGTCCTTCATCTCCATGTGATACAAACTCAATTGTGAATGAATTTGGAGATATTGAATTATCAAATTTCAATGGGTCGTCTTGTAATTTCACCAATAATGTTTCAGCTCAAGCATATGAAACCAACAACATGAACATGAACATGAATTGGGGTGCACCAATGAATGACCAAACAGCTTCAATTAGCACTCTTCCTTCACTTTCATCATGGCCACCTAATCCCAATCTTCTAACTTCAAATCTTTCAATGAATTCCCTTCTTCTCAAGGCATTGCAACTTAGAACCATGAACCATTCTCAATTTGGAACTAACCATTTGAGCTTCCAAGCTTCTTCTTCTTCTTCCAAAGTTTTCGAGTCTCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGGAGCAACCATTGAACTTGGACTCCCTCTGGTGAAAATGCCACGCTAATTAACGCTCTTTGTAATATGTGAGATCAATAAGGGAAGTTTAGGTATATGTAATTTGAATGTGAAGTTTTAGGGTTTCGTTGAAAATGTTGTATGTTGATGTTGATGTTGAACCAAAATCCATTTCAGTGTTAAGGGTTTGGGGAGAAACCCCAAGTCCTTTTGTTTCAAATTCAACCCATCTTGTTATGTGCTTATATTTGACCTCCATTTGTATAATGCTTCTATTTAGTCTTTGTTAATCCAATCTTGACATGATATGTATACCCATCCTTGTAGGTTATAATCTGCCAAAACTTAATCTAGTGGATATTAGAAACAAATATTAATTAGATTTGATTCATAAACTAGAGAGATCATAACAAAATGAATGAATAAATAAAAGTTTTAAGGACTGTAAAATTTAGAATCTGATATGGTGTCAATGAACTTGGTTTTGTATATGATTTGAAAATGAGTGACCAAACATCCAAATGTTATGAAATTTCTTGCATATATAAAATTTTAAATATATGATTTTGTTGAATAGTTTGTGATACTCGAGTAAGGAGGGGTATGTGAATGAACTAAGAGTGCATACAAATGCATCCAAATGAGAGTTATTCTGAAGAAAGGCTTAAAAGAATTGAAACGTACTACCTATATCAATAAGGTGCATCTTCCTTTTTAGGGGCTCAACCATTGGAACATTATTGTTAAGCGTTCTTGGAGCAATTCTATGGGACTTGTGTTGGTTTTCCTAAGATGCATGTGAGTGAGAACAAAATATGCTAGAAGGACTCGTGTTGGTTTGTAGGAGATAGTTTTCACTCTTAAAAGCGAGGCTATCAGGTGCATAATCCAGATTTCGGATTCTCGAAAAGTAAGTAATATGACATATTGTAGGAAAATACTGGGAGTCATCAAGTGTCATTACATTGAGATTATCCATATTTTGATTTTTTTCAAAGGTTTTTTTTGTTGGGGAGATGTGTATTTTTCAAAGTAATTGACCGAGAGTTTTACATATCATGTATCGAACATAAAGAGTTGACTTTCTAAACCCTATGAATAAGAAGTTCCAAAAGTAAAACCTAATTGTTTGACTTTTGGCTTTCACATTGCATTAACTCAATTCACACATGCATAGTGGCCCATACATCCATAGAATATTTCCATCAATGTTTTAAAAAAATAAAAATAGCCATGTAGGTACCATGTGCAATTGTATTGCATGGTTGAAAGCTTTTTTAGGAGGAATCCTAAACTTAACTATTTCCTCTTATTACGAGCTCATTCAAATACCGACATCACAAAGATGATTATTCTTCTAACATTTCAAACTTTCACTCTATGATTATACTATTACAAAGATGATTATTCTTCTACCGAGAAAATCTCGAAATATGTACTTTTTCAACGTGAAAAATAAAAAAAAGAAGAAGAAAAAATTCTCTAGCTCTCAATTATTAAGAACTGGTCAAACAAAGAACCCAAATTGGCTCTTTGATCCTACTTTATGAACCTGTTGAACAAAACTAGAGTAGCACATACACAATAAACCATTTGGAAGTGGCATGAACCAGATATTGGTCAAGAATTAGGATGAAAAAATTGGGCCATTGGCTGAATTCATATATGGATCTTGCATTTTGTTGAGTAAAAAGTATACTATTAGAGCTGCAGAAGAGGGAAGTTATCCGCATCGAATCTACATGAAAATAAAAGGAAAGATCAAACCCATATGGGCTAGAACTTGAAGCAAATGATGGAGGGCTTCTTATAAGTTAGCAGGAACACTTTTGCAACCAGCTTTCAATGGAAAATGGCAACGAAATTTTTTTGCGTTGACTTAG

mRNA sequence

AAACCCGACGACACGAAAAGAATCGATAGCGTTCTTCAATGGATGATAATCTCCCTCCTGGATTCAGATTCCACCCTACTGATGAAGAACTCATTTCTTATTACCTCACTCAAAAGATTTCTGATTCTTCTTTTACCTCTAAAGTAATTGCGGTCGTCGATCTCAACAAGAACGAGCCTTGGGATCTCCCAGCCAAAGCTTCGATGGGAGAGAAAGAATGGTACTTTTTCAGCTTGAGAGATCGAAAGTATCCAACAGGGCTTCGAACAAATCGAGCCACAGAAGCTGGCTATTGGAAGACAACAGGAAAGGACAAGGAAATCTTTGGAGGTGGTGCGTTGGTTGGAATGAAAAAAACCCTTGTCTTTTACCAGGGAAGAGCCCCTAGAGGCGAGAAAAGTAATTGGGTTATGCACGAATACCGCCTCGAAAACAACCATTTTTTCAAGCCTTCCAAGGAAGAATGGGTAGTTTGCAGGGTGTTTCAGAAGCAAAATCCACCAAAAAAGCCACAGCAATCATCGTCCTCTCAGCCTTGTCCTTCATCTCCATGTGATACAAACTCAATTGTGAATGAATTTGGAGATATTGAATTATCAAATTTCAATGGGTCGTCTTGTAATTTCACCAATAATGTTTCAGCTCAAGCATATGAAACCAACAACATGAACATGAACATGAATTGGGGTGCACCAATGAATGACCAAACAGCTTCAATTAGCACTCTTCCTTCACTTTCATCATGGCCACCTAATCCCAATCTTCTAACTTCAAATCTTTCAATGAATTCCCTTCTTCTCAAGGCATTGCAACTTAGAACCATGAACCATTCTCAATTTGGAACTAACCATTTGAGCTTCCAAGCTTCTTCTTCTTCTTCCAAAGTTTTCGAGTCTCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGGAGCAACCATTGAACTTGGACTCCCTCTGGGCTTCTTATAAGTTAGCAGGAACACTTTTGCAACCAGCTTTCAATGGAAAATGGCAACGAAATTTTTTTGCGTTGACTTAG

Coding sequence (CDS)

ATGGATGATAATCTCCCTCCTGGATTCAGATTCCACCCTACTGATGAAGAACTCATTTCTTATTACCTCACTCAAAAGATTTCTGATTCTTCTTTTACCTCTAAAGTAATTGCGGTCGTCGATCTCAACAAGAACGAGCCTTGGGATCTCCCAGCCAAAGCTTCGATGGGAGAGAAAGAATGGTACTTTTTCAGCTTGAGAGATCGAAAGTATCCAACAGGGCTTCGAACAAATCGAGCCACAGAAGCTGGCTATTGGAAGACAACAGGAAAGGACAAGGAAATCTTTGGAGGTGGTGCGTTGGTTGGAATGAAAAAAACCCTTGTCTTTTACCAGGGAAGAGCCCCTAGAGGCGAGAAAAGTAATTGGGTTATGCACGAATACCGCCTCGAAAACAACCATTTTTTCAAGCCTTCCAAGGAAGAATGGGTAGTTTGCAGGGTGTTTCAGAAGCAAAATCCACCAAAAAAGCCACAGCAATCATCGTCCTCTCAGCCTTGTCCTTCATCTCCATGTGATACAAACTCAATTGTGAATGAATTTGGAGATATTGAATTATCAAATTTCAATGGGTCGTCTTGTAATTTCACCAATAATGTTTCAGCTCAAGCATATGAAACCAACAACATGAACATGAACATGAATTGGGGTGCACCAATGAATGACCAAACAGCTTCAATTAGCACTCTTCCTTCACTTTCATCATGGCCACCTAATCCCAATCTTCTAACTTCAAATCTTTCAATGAATTCCCTTCTTCTCAAGGCATTGCAACTTAGAACCATGAACCATTCTCAATTTGGAACTAACCATTTGAGCTTCCAAGCTTCTTCTTCTTCTTCCAAAGTTTTCGAGTCTCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGGAGCAACCATTGAACTTGGACTCCCTCTGGGCTTCTTATAAGTTAGCAGGAACACTTTTGCAACCAGCTTTCAATGGAAAATGGCAACGAAATTTTTTTGCGTTGACTTAG

Protein sequence

MDDNLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGGALVGMKKTLVFYQGRAPRGEKSNWVMHEYRLENNHFFKPSKEEWVVCRVFQKQNPPKKPQQSSSSQPCPSSPCDTNSIVNEFGDIELSNFNGSSCNFTNNVSAQAYETNNMNMNMNWGAPMNDQTASISTLPSLSSWPPNPNLLTSNLSMNSLLLKALQLRTMNHSQFGTNHLSFQASSSSSKVFESPQQQQQQQQQQQQEQPLNLDSLWASYKLAGTLLQPAFNGKWQRNFFALT

Homology

[Close]

BLAST of CmaCh11G002700 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.0e-62
Identity = 115/153 (75.16%), Postives = 128/153 (83.66%), Query Frame = 0


Query: 5   LPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYFF 64
           LPPGFRFHPTDEELI++YL +K+ D  F+S+ IA VDLNK EPW LP +A MGEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFF 76

Query: 65  SLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGG--ALVGMKKTLVFYQGRAPRGEKSN 124
           SLRDRKYPTGLRTNRATEAGYWK TGKD+EIF     ALVGMKKTLVFY+GRAP+GEKSN
Sbjct: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSN 136

Query: 125 WVMHEYRLENN---HFF-KPSKEEWVVCRVFQK 152
           WVMHEYRLE     HF  + SK+EWV+ RVFQK
Sbjct: 137 WVMHEYRLEGKFSYHFISRSSKDEWVISRVFQK 169

[Close]

BLAST of CmaCh11G002700 vs. ExPASy Swiss-Prot
Match: Q9FKA0 (NAC domain-containing protein 92 OS=Arabidopsis thaliana OX=3702 GN=NAC92 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 3.4e-61
Identity = 109/153 (71.24%), Postives = 127/153 (83.01%), Query Frame = 0


Query: 4   NLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYF 63
           +LPPGFRFHPTDEELI++YL  K+ ++ F++  I  VDLNK EPWDLP KA MGEKEWYF
Sbjct: 19  DLPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLPWKAKMGEKEWYF 78

Query: 64  FSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGGALVGMKKTLVFYQGRAPRGEKSNW 123
           F +RDRKYPTGLRTNRATEAGYWK TGKDKEIF G +LVGMKKTLVFY+GRAP+G K+NW
Sbjct: 79  FCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGVKTNW 138

Query: 124 VMHEYRLENNHFF----KPSKEEWVVCRVFQKQ 153
           VMHEYRLE  +      + +K EWV+CRVFQK+
Sbjct: 139 VMHEYRLEGKYCIENLPQTAKNEWVICRVFQKR 171

[Close]

BLAST of CmaCh11G002700 vs. ExPASy Swiss-Prot
Match: Q9FLR3 (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.7e-61
Identity = 109/158 (68.99%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 4   NLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYF 63
           +LPPGFRFHPTDEELI++YL +K+ D  F++K I  VDLNK EPW+LP KA +GEKEWYF
Sbjct: 16  DLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYF 75

Query: 64  FSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGGALVGMKKTLVFYQGRAPRGEKSNW 123
           F +RDRKYPTGLRTNRAT+AGYWK TGKDKEIF G +LVGMKKTLVFY+GRAP+G+K+NW
Sbjct: 76  FCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKSLVGMKKTLVFYRGRAPKGQKTNW 135

Query: 124 VMHEYRLEN----NHFFKPSKEEWVVCRVFQKQNPPKK 158
           VMHEYRL+     ++  K +K EWV+CRVF K    KK
Sbjct: 136 VMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKK 173

[Close]

BLAST of CmaCh11G002700 vs. ExPASy Swiss-Prot
Match: Q9FK44 (NAC domain-containing protein 87 OS=Arabidopsis thaliana OX=3702 GN=NAC087 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 2.2e-60
Identity = 113/187 (60.43%), Postives = 142/187 (75.94%), Query Frame = 0


Query: 4   NLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYF 63
           +LPPGFRFHPTDEE+I+ YL +K+ +S FT+  +   DLNK EPWDLP +A MGEKE+YF
Sbjct: 20  DLPPGFRFHPTDEEIITCYLKEKVLNSRFTAVAMGEADLNKCEPWDLPKRAKMGEKEFYF 79

Query: 64  FSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIF-GGGALVGMKKTLVFYQGRAPRGEKSN 123
           F  RDRKYPTG+RTNRATE+GYWK TGKDKEIF G G LVGMKKTLVFY+GRAP+GEK+N
Sbjct: 80  FCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKGKGCLVGMKKTLVFYRGRAPKGEKTN 139

Query: 124 WVMHEYRLENNHFF----KPSKEEWVVCRVFQKQNPPKKPQQSSSSQPCPSSPCDTNSIV 183
           WVMHEYRLE  + +    K +++EWVVCRVF K NP      S+++QP    P +  + +
Sbjct: 140 WVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNP------STTTQPMTRIPVEDFTRM 199

Query: 184 NEFGDIE 186
           +   +I+
Sbjct: 200 DSLENID 200

[Close]

BLAST of CmaCh11G002700 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.1e-59
Identity = 138/312 (44.23%), Postives = 184/312 (58.97%), Query Frame = 0


Query: 4   NLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYF 63
           +LPPGFRFHPTDEELI++YL +K+ D+SF++K I  VDLNK+EPW+LP  A MGEKEWYF
Sbjct: 15  DLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYF 74

Query: 64  FSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGGALVGMKKTLVFYQGRAPRGEKSNW 123
           F +RDRKYPTGLRTNRATEAGYWK TGKDKEI+ G +LVGMKKTLVFY+GRAP+G+K+NW
Sbjct: 75  FCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGQKTNW 134

Query: 124 VMHEYRLEN----NHFFKPSKEEWVVCRVFQKQ---------------------NPPKKP 183
           VMHEYRLE     ++  K +K EWV+CRVFQK                      NP   P
Sbjct: 135 VMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIPISSLIRIGSLGTDFNPSLLP 194

Query: 184 QQSSSS---QPCPSSPCDTNSIVNEFGDIELSNFNGSSCNFTNNVSAQ------AYETNN 243
             + SS       + P       N+    + +  N  S    N++ A        Y+T +
Sbjct: 195 SLTDSSPYNDKTKTEPVYVPCFSNQTDQNQGTTLNCFSSPVLNSIQADIFHRIPLYQTQS 254

Query: 244 MNMNMNWGAPMNDQTASISTLPSLSSWPPNPNLLTSNLSMNSLLLKALQLRTMNHSQFGT 282
           + ++MN  +P+  Q  S+  L ++       +L T ++S  + +   +     +  +FG 
Sbjct: 255 LQVSMNLQSPVLTQEHSV--LHAMIENNRRQSLKTMSVSQETGVSTDMNTDISSDFEFGK 314

[Close]

BLAST of CmaCh11G002700 vs. TAIR 10
Match: AT3G18400.1 (NAC domain containing protein 58 )

HSP 1 Score: 308.5 bits (789), Expect = 6.4e-84
Identity = 190/332 (57.23%), Postives = 217/332 (65.36%), Query Frame = 0


Query: 1   MDDNLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKE 60
           M++NLPPGFRFHPTDEELI++YL +K+SD  FT K +  VDLNK EPWDLPAKASMGEKE
Sbjct: 1   MEENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKE 60

Query: 61  WYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGGALVGMKKTLVFYQGRAPRGEK 120
           WYFFS RDRKYPTGLRTNRATEAGYWKTTGKDKEI+  G LVGMKKTLVFY+GRAP+GEK
Sbjct: 61  WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRAPKGEK 120

Query: 121 SNWVMHEYRLENNHFFKP-SKEEWVVCRVFQKQNPPKK--PQQSSSSQPCPSSPCDTN-S 180
           SNWVMHEYRLE+   F P +KEEWVVCRVF+K    KK   QQ  SSQP   SPCD N S
Sbjct: 121 SNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSS 180

Query: 181 IVNEFGDI-ELSNFNGSSCNFTNNVSAQAYETNNM----NMNMNWGAPMNDQTASISTLP 240
           + NEF DI EL N N +S     N     Y   N+    N     G  MN   AS     
Sbjct: 181 MANEFEDIDELPNLNSNSSTIDYNNHIHQYSQRNVYSEDNTTSTAGLNMNMNMAS----T 240

Query: 241 SLSSWPPNPNLLTSNLS-MNSLLLKALQLR-----------TMNHS--QFGTNHLSFQAS 300
           +L SW    +LL   LS +NSLLLKA Q+R           + NHS  Q G +++   AS
Sbjct: 241 NLQSW--TTSLLGPPLSPINSLLLKAFQIRNSYSFPKEMIPSFNHSSLQQGVSNMIQNAS 300

Query: 301 SSSSKVFESPQQQQQQQQQQQQEQPLNLDSLW 310
           SSS            Q Q Q QE+  N+DS+W
Sbjct: 301 SSS------------QVQPQPQEEAFNMDSIW 314

[Close]

BLAST of CmaCh11G002700 vs. TAIR 10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-63
Identity = 115/153 (75.16%), Postives = 128/153 (83.66%), Query Frame = 0


Query: 5   LPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYFF 64
           LPPGFRFHPTDEELI++YL +K+ D  F+S+ IA VDLNK EPW LP +A MGEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFF 76

Query: 65  SLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGG--ALVGMKKTLVFYQGRAPRGEKSN 124
           SLRDRKYPTGLRTNRATEAGYWK TGKD+EIF     ALVGMKKTLVFY+GRAP+GEKSN
Sbjct: 77  SLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSN 136

Query: 125 WVMHEYRLENN---HFF-KPSKEEWVVCRVFQK 152
           WVMHEYRLE     HF  + SK+EWV+ RVFQK
Sbjct: 137 WVMHEYRLEGKFSYHFISRSSKDEWVISRVFQK 169

[Close]

BLAST of CmaCh11G002700 vs. TAIR 10
Match: AT5G39610.1 (NAC domain containing protein 6 )

HSP 1 Score: 236.9 bits (603), Expect = 2.4e-62
Identity = 109/153 (71.24%), Postives = 127/153 (83.01%), Query Frame = 0


Query: 4   NLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYF 63
           +LPPGFRFHPTDEELI++YL  K+ ++ F++  I  VDLNK EPWDLP KA MGEKEWYF
Sbjct: 19  DLPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLPWKAKMGEKEWYF 78

Query: 64  FSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGGALVGMKKTLVFYQGRAPRGEKSNW 123
           F +RDRKYPTGLRTNRATEAGYWK TGKDKEIF G +LVGMKKTLVFY+GRAP+G K+NW
Sbjct: 79  FCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGVKTNW 138

Query: 124 VMHEYRLENNHFF----KPSKEEWVVCRVFQKQ 153
           VMHEYRLE  +      + +K EWV+CRVFQK+
Sbjct: 139 VMHEYRLEGKYCIENLPQTAKNEWVICRVFQKR 171

[Close]

BLAST of CmaCh11G002700 vs. TAIR 10
Match: AT5G07680.1 (NAC domain containing protein 80 )

HSP 1 Score: 236.1 bits (601), Expect = 4.1e-62
Identity = 109/158 (68.99%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 4   NLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYF 63
           +LPPGFRFHPTDEELI++YL +K+ D  F++K I  VDLNK EPW+LP KA +GEKEWYF
Sbjct: 16  DLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYF 75

Query: 64  FSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGGGALVGMKKTLVFYQGRAPRGEKSNW 123
           F +RDRKYPTGLRTNRAT+AGYWK TGKDKEIF G +LVGMKKTLVFY+GRAP+G+K+NW
Sbjct: 76  FCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKSLVGMKKTLVFYRGRAPKGQKTNW 135

Query: 124 VMHEYRLEN----NHFFKPSKEEWVVCRVFQKQNPPKK 158
           VMHEYRL+     ++  K +K EWV+CRVF K    KK
Sbjct: 136 VMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKK 173

[Close]

BLAST of CmaCh11G002700 vs. TAIR 10
Match: AT5G18270.2 (Arabidopsis NAC domain containing protein 87 )

HSP 1 Score: 236.1 bits (601), Expect = 4.1e-62
Identity = 114/187 (60.96%), Postives = 143/187 (76.47%), Query Frame = 0


Query: 4   NLPPGFRFHPTDEELISYYLTQKISDSSFTSKVIAVVDLNKNEPWDLPAKASMGEKEWYF 63
           +LPPGFRFHPTDEE+I+ YL +K+ +S FT+  +   DLNK EPWDLP+KA MGEKE+YF
Sbjct: 20  DLPPGFRFHPTDEEIITCYLKEKVLNSRFTAVAMGEADLNKCEPWDLPSKAKMGEKEFYF 79

Query: 64  FSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIF-GGGALVGMKKTLVFYQGRAPRGEKSN 123
           F  RDRKYPTG+RTNRATE+GYWK TGKDKEIF G G LVGMKKTLVFY+GRAP+GEK+N
Sbjct: 80  FCQRDRKYPTGMRTNRATESGYWKATGKDKEIFKGKGCLVGMKKTLVFYRGRAPKGEKTN 139

Query: 124 WVMHEYRLENNHFF----KPSKEEWVVCRVFQKQNPPKKPQQSSSSQPCPSSPCDTNSIV 183
           WVMHEYRLE  + +    K +++EWVVCRVF K NP      S+++QP    P +  + +
Sbjct: 140 WVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNP------STTTQPMTRIPVEDFTRM 199

Query: 184 NEFGDIE 186
           +   +I+
Sbjct: 200 DSLENID 200

The following BLAST results are available for this feature:

BLAST of CmaCh11G002700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04017	3.0e-62	75.16	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
Q9FKA0	3.4e-61	71.24	NAC domain-containing protein 92 OS=Arabidopsis thaliana OX=3702 GN=NAC92 PE=1 S...	[more]
Q9FLR3	5.7e-61	68.99	NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 ...	[more]
Q9FK44	2.2e-60	60.43	NAC domain-containing protein 87 OS=Arabidopsis thaliana OX=3702 GN=NAC087 PE=2 ...	[more]
Q9FLJ2	1.1e-59	44.23	NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2...	[more]

BLAST of CmaCh11G002700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18400.1	6.4e-84	57.23	NAC domain containing protein 58	[more]
AT5G53950.1	2.2e-63	75.16	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G39610.1	2.4e-62	71.24	NAC domain containing protein 6	[more]
AT5G07680.1	4.1e-62	68.99	NAC domain containing protein 80	[more]
AT5G18270.2	4.1e-62	60.96	Arabidopsis NAC domain containing protein 87	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 14..154 e-value: 2.5E-58 score: 198.2
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 4..151
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 6..130 e-value: 4.9E-40 score: 137.4
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 5..151 score: 60.556919
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 278..301
None	No IPR available	PANTHER	PTHR31744:SF123	BNACNNG63190D PROTEIN	coord: 2..293
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 2..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G002700.1	CmaCh11G002700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding