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CmaCh11G002600 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAATGCTAGGTATTTTTTCCCTCCATTTGCTTTGGTCGATCCTGCAGTCCGGCGGCTTGTCTTCAATTCTCACGTCCTCTTTCGTGTAAGGTATCTATCCAATTCCTTCTTCGATCCATGGTGATCTCTTTGGTTCTTTGCTCTGTTCAGATCCGCAGCATTTAAGGCAGTTCTTATTTGACTTCTCTGCGAGATTTTTGGTTCTTTGTATTTTTCTGTTTCTTTTGCCTTTATTCATTACTGTTTTTCATCTGCTGCTGAGAATCACTCGGTCGTTGCTTGTCGAATACCCTGCATAAAATTTTCGAGTACTAATTTAATAAAGACCGTCGTGATTGAAATGATCAAATTAGGGGTGTTTAGCGTTGAAGTTCTTATTCTTGCAGGAGATTGTTTATGAGTTGAAAAACTTGCCATGCTATGCTGATATCTTCCTCGATGCCTTGGTTTAAATATTGAAGTGATTGGAATTTTAACTCGCATGTGCTTTCTTAAAGTTGGGCTCTTTTACTTTACTTTTATAGTTTTATAGAACATTCTGGACTGATATTCATAAGCAATTCTGTTTGCCATCAGTTTTACTTGTTCCTACATTTAATGACTCGTTGGATTGTTCAAAATGGGAACTTGAAGCTGCATAACCAGTAATTTTTGGTAGTTTGTCTTGGAAATTGCTGCTTAGGAGTAATTATTAGGGAAAATATTCGCTTTGGTATTGGTTTTCTAAGATTTGTTTTTCGTGTGTTTGTTTAGGAATGGAATCGCAGATCAAGCATGCTGTGGTGGTCAAAGTGATGGGTAGAACTGGATCAAGAGGGCAGGTGACTCAAGTTAGAGTCAAGTTTCTTGATGATCAGAATCGTTACATTATGAGGAATGTCAAGGGGCCAGTGAGGGAAGGAGACATTCTTACCCTGTTGGAGTCAGAGAGGGAAGCTAGAAGATTGCGTTGATGGGGATCAAGTTCCCAGTTCTCCGGTTTGCAGTTGCTAAATGTTATCCTTTTATCATACCTACAAATAGAATGCTTTACATCATTTTTCCCTTTTGAAGTGTGATTTTAGTGACTAGCTTCTCCAAGGCTTTGCTTCCATGGCAGAATATGTGAACTGGATGAGTAATTTAATTGAGTTCTGAAACGATAATTTTGTGTTTATTTACCAACTGCTTAATATTTTTGGTGTTACTTCGGTCATGCAAGACTGTTAAGTTTTAAATGATGGTTTCAATAATATGCAATTTAGTCTTATCCAAGAAAATATGTAAATTAGGTGATATAGGATCATAAAATGTATCTCTTTTCTTACACCCTTCATCCTTTTCCCCAGTTCTTGTTCATGGAGTCATGCCCTGTCTAGTCATAATCACCGAGTCTTCCCTCTAGCATCAAAAAGAAGAGAATCCAAGGAAAACCTTATGAAGGCAAGAGCAAGAAAATTCTTTATGTTCATCGACCTATTATATTTATACACGACATTTTAAAAAGTTATGTTATCATTTATTCAGGTCATTTTTCATCATGGATTTTTTAATTGAACTATACTCATATACTCAAATCTATTGAACTATACTCAAGTTGAC ATGCAAATGCTAGGAATGGAATCGCAGATCAAGCATGCTGTGGTGGTCAAAGTGATGGGTAGAACTGGATCAAGAGGGCAGGTGACTCAAGTTAGAGTCAAGTTTCTTGATGATCAGAATCGTTACATTATGAGGAATGTCAAGGGGCCAGTGAGGGAAGGAGACATTCTTACCCTGTTGGAGTCAGAGAGGGAAGCTAGAAGATTGCGTTGATGGGGATCAAGTTCCCAGTTCTCCGGTTTGCAGTTGCTAAATGTTATCCTTTTATCATACCTACAAATAGAATGCTTTACATCATTTTTCCCTTTTGAAGTGTGATTTTAGTGACTAGCTTCTCCAAGGCTTTGCTTCCATGGCAGAATATGTGAACTGGATGAGTAATTTAATTGAGTTCTGAAACGATAATTTTGTGTTTATTTACCAACTGCTTAATATTTTTGGTGTTACTTCGGTCATGCAAGACTGTTAAGTTTTAAATGATGGTTTCAATAATATGCAATTTAGTCTTATCCAAGAAAATATGTAAATTAGGTGATATAGGATCATAAAATGTATCTCTTTTCTTACACCCTTCATCCTTTTCCCCAGTTCTTGTTCATGGAGTCATGCCCTGTCTAGTCATAATCACCGAGTCTTCCCTCTAGCATCAAAAAGAAGAGAATCCAAGGAAAACCTTATGAAGGCAAGAGCAAGAAAATTCTTTATGTTCATCGACCTATTATATTTATACACGACATTTTAAAAAGTTATGTTATCATTTATTCAGGTCATTTTTCATCATGGATTTTTTAATTGAACTATACTCATATACTCAAATCTATTGAACTATACTCAAGTTGAC ATGCAAATGCTAGGAATGGAATCGCAGATCAAGCATGCTGTGGTGGTCAAAGTGATGGGTAGAACTGGATCAAGAGGGCAGGTGACTCAAGTTAGAGTCAAGTTTCTTGATGATCAGAATCGTTACATTATGAGGAATGTCAAGGGGCCAGTGAGGGAAGGAGACATTCTTACCCTGTTGGAGTCAGAGAGGGAAGCTAGAAGATTGCGTTGA MQMLGMESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILTLLESEREARRLR Homology
BLAST of CmaCh11G002600 vs. ExPASy Swiss-Prot
Match: P46302 (40S ribosomal protein S28 OS=Zea mays OX=4577 GN=RPS28 PE=3 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 8.9e-25 Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of CmaCh11G002600 vs. ExPASy Swiss-Prot
Match: Q9SR73 (40S ribosomal protein S28-1 OS=Arabidopsis thaliana OX=3702 GN=RPS28A PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-24 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of CmaCh11G002600 vs. ExPASy Swiss-Prot
Match: P34789 (40S ribosomal protein S28-2 OS=Arabidopsis thaliana OX=3702 GN=RPS28C PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 5.8e-24 Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of CmaCh11G002600 vs. ExPASy Swiss-Prot
Match: Q6PBK3 (40S ribosomal protein S28 OS=Danio rerio OX=7955 GN=rps28 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 8.7e-20 Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of CmaCh11G002600 vs. ExPASy Swiss-Prot
Match: Q90YP3 (40S ribosomal protein S28 OS=Ictalurus punctatus OX=7998 GN=rps28 PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 8.7e-20 Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of CmaCh11G002600 vs. TAIR 10
Match: AT3G10090.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-25 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of CmaCh11G002600 vs. TAIR 10
Match: AT5G03850.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 112.8 bits (281), Expect = 1.1e-25 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of CmaCh11G002600 vs. TAIR 10
Match: AT5G64140.1 (ribosomal protein S28 ) HSP 1 Score: 110.9 bits (276), Expect = 4.1e-25 Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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