CmaCh11G002570 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G002570
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type domain-containing protein
Location	Cma_Chr11: 1304803 .. 1310581 (+)
RNA-Seq Expression	CmaCh11G002570
Synteny	CmaCh11G002570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGATCCGCAATTCCCAAAGTTTCGGCTCAAGATTTTTTCCTCTTACGAAAATAAAAATCTCATCCCATCTTCACCTTCCAAATTCTGTTTCCTTTTCGACTATTTTCCTATTCTGGTTCATTATCTTGTTCAAATTGAAGCTACACACATGGAGCAAGCCACCAAATACGGTGGTTGAGAAACGCGGGAGGGTGAGATAAGAATCTTCCATAAACTCTATGAGACCCCGTCACGTCGACATTTGCCTCCTTTGTTTTCCACCACGCCCCCTCCACTTGATTCCATATTTCAAAATTGGAACAAGGAACATGGATTAAAATATTCTCGACTGTGAAATAGAGAGAGAGAGAAAGAGGGGTTTGTTTCCTTTTTCTTTCTCGGTGGTGGAATTAGACCCATCTATCTCCTTTTACTTTATAAATCATTCTTTTAGTGGCTTTCGGAGGAAGTAATCGTTGATAGGGGAAACAAACACAGACGGCGGGGATTGAGATTTGAGAAATTCCGGTCCATTCTTCTTGCCCATTCTTTCCTATTAATACCCAGTTTCTGATTCTTCTTCTTTTTCCGTTTTTGGGTTTTATTCTTTTCAATGGTTTGCATGATGGGTTTTCGAGTTTTTGGGTTTTGAGTGGGGCGTCGAAGAGGGGTGGAGGGCTTTTGAGGTAAAAGCTAGTTTGGGGGCGGAGGAATGACTTGGAGGAGAGTGTTGAAGTCCGTGCAGGCACTTTTGGCCCACGGTTCACTCTTCTGTTTCACGCTCTTGCTCGTTCTCAAGCTCGATCATTTCGTCTCCCACAGTTGGTGGTACTGTTATCTACTTATTTCTTTCTTTCTCTCTTCTTCGATCTCTCCAGCGTTTCAATTTCGTTTTGCTTTGGATAACTGTTATTTTTCACATTCCCTTGCGGTTCACTTTGATTAGGGATTGAGATGATCTTTCTTTCCGTTGTATTCTCACAATTTTTTGTGTGCAGGGTTATTTTTTTCCCACTTTGGGTATTTCATGTCGTTGTTGCTCGGGGAAGGTTCTCATTACCTGCCCCATCTCTTCCTCATAATCGCCATGTAAGTCAGTAATGGCCAATGCATTTTGTTGAGCTTGACTCTGTTTTCTATTTGGTACCAAATGGTTCCTTTGATATGACATCATTTGTGAGTTTGCTATGTGTTTCTGTTGAACAGTGGGCACCGTGCCATGCCGTTGTCTCCACGCCTTTGCTTGTAACATTTGAATTACTTCTTTGTATATACCTCGAGAGCCTGTCTGGTATGCTCATATTTTTATGAAGTTAACTGTTCAAGAATGTTGAAGCATTATTTCCAGTTCAACACTTCATTTTCATTATTCAACAGGGTATTGTTTGGTATGTTTATTGATGCAATACCGTTTCTTGCAGTTTATGGTTTTCCTGCTGTGAATTTGAAGATTGTCTTTCTACCGTTGCTGGCTTTTGAAATCATCATTTTAATAGATAATTTCAGGTACTTGTTCATTTATCTTACTTCATTAAATGTTGTATAGATTGAGGTATCAATGCATTTTTATTGTATTTTTTTTTTTTTGTCTTATCTGATGCTTTAGTCTTTTAACTATGAACTTTATGGGTTGTATCCGTCTTCACCTCTGTACTTGTGAGAATTATGTGAGATCCCACGTCGGTTGGAGAGGGGAACAAAGAATTTTGTATAAAAGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAGCCTTGAGGGAAGCCTGGAAGGGAAAACCCAAAGAAGACAATATCTACTGACGGTGGGCTTGGGCCATTACAGTTGGTATCAAAACCAAGCACCGGACAATGTGCCAACAAGGAGGCTGAATCCCGAAGGGGGTGGACACCAAGCGGTTTGCCAGCAAAGATGCTAGGCTCCGAAGGGGGTGGATTTGGGGGGGTTCTACATCGATTGGAGAGGGAAACGAGTGCCAGCGATGAGTGAGATCTCACATCTGTTAGAGAGGGGAACAAAACAATCTTTATAAGAGTGTGGAAACCTCTCCCTAGCAGACACATTTTAAAGCTTTGAGGGAAAGCCCGGAAGAGAAAGCCTAAAGAGAACAATATCTGCTAGCGGTGGGCTTGGGTTGTTACAAATTACCTCATCTAAACTGTCTTGTGTGGATTCTTGACGTTCACCTATTAATTCCAACAACCCAGATGGCCTAAGAATGATTGGATTGTGATATTAAGTTGAACCAGAGATTCATACACGGAAAGCACGTTTGATGAATGAATAGTTGTTTGTATAGTATGATGCAATCAGCAGTTCAAATAATCCTTCTCAACAAGCTTGCTGGCTTTTCCTACTTGCTCTGCTTTTGAATCTGCACAAGGTTATTGTGAGTTGGTGTGACCTTAACTTTCTTATCTTTTCAGAATGTGTAGATCACTAATGCCTGGTGACGACGAAAGCATGAGCGATGAGGCAATATGGGAAACTCTTCCTGTAAGTATTATTAGATTCTCAATCAATGAACTTTTCTGTGAGGCCACTCCTTTAAATTAATGCTTGAGAGTGGTAAAATACATGATGTATTGAAGCTTTTTGAGTTATATGTCCCCTTGAAAGAACTCAGCACATTCTATATTCTCTGCGCTGAGATCAATTATCTTCTGGCTGCTAGTATTTAGCCTCGTAGTGTTTGTGCCATAAAATTCATCTCTCAATCTTAATATTTTATGGTTTGTTGCATCATTAAATTGTTTCATTCGCAATATCTTGATTATGTGAAGAGGGAAACCTGTACATTGACTCTAGTTTTGGTAGTGGACATAGAGGATGTTGAGACTGAATGTTCTCATACAATTTGACAATTCTTAACATTAACTTTTGAGATAAAAACAACGTCCATCAGACAAACATTAAGTGTTAGATTATTTGATAGCTAGTTTTCTTATGATTCCAGGGATTGAGTTCGCTCTTAGGATGCGATCTTCAATTTTCTTAATGAACGTAGTGAGGTTGGATATTCTTGCTTTTAGAATGCCAACATCTATTTTCTAAAAGAAGCAAAATTTTTAGAAAAAAGGAGATGATAATGATCAACCAGATGCAGATTCAGATAATGTACTCTTCTCTTGCAAATATCAAACGAATATAATCACCCTTCGAGTATTCTTGGAAGAACGTATCTTGTATTCTGTTTTAAATTCAGATTAGGATCTTGTTGGAGACGAGTTAATTTTCTTCTCTGCTTCTGTAGCACTTTTGGGTTGCTATTTCAATGGTCTTCTTCGTTGCTGCTACAGTGTTTACTCTACTGAAGCTATGTGGTAATTTTTTATTCTTATTTTTGCTTTCTCTTTCCCTATCCTTTATATATGAAATGTGACCTTAGTTAACTTCATCCAGGTCTGAAAGTCACCATTCTTGTATGGAACTGCGTTTTGCTTTGCGTTTATATTAATCCTTAAATAGCCATTTCCCAGATGTTAGATGCCATAGTTTCTTTTGTTTGATTTAAAATAATGTGTGGCTATGTGGAGGGTTCTGTATGGATGTAGCGTTGTGGTTTAGAGTGCTCGATTGTCGACGGCATGGATCTATTTAATATGCATATATGTGTATTGGTAGGCATAAGTTTTTCTTGGTGATCAATCTCTAATTTGATAAAAATTAATTGCAGGGAGTGTTGGTGCTCTTGGCTGGTGGGACTTATTTATTAACTTTGGGTAACATTTATGCACATATTGTGTTAGAATGTCCTGTTTTTACATTTTGCTTACATCTACCATTATGGACCAACCCAATTTAATTGTTTTCCTCAATATTTTGGTTGCAGCATTGCGGAGTGCTTTGCGTTTCTCGTCTGTACAAAGTGGTCTAATCCTGTAATTCATAGAAATATTCAAACAAGAGAAACTTGTTCATCATCAGCCGTAGTTAGATATCTAGATTGGAACAACGGTCTGATGGTTTATCCAGAGCAGGATCAGCATCAAGACAGAATGTGTGGCCTTCAAGACATTGGCGGCCATATCATGAAAATTCCCATAATTGTTTTTCAAGTCCTACTTTGCATGTATTTAGAGGTATACTGCACATTCAATGCATCAACCCTGAGTTCAAAACATGTGAAGTTACCAAATTGACTATTATGTTCTTGTATATAATCTTGACTTATCGACATTTCAGGGAACACCTGCGAGCGCAAAACATATACCACTTCCTGTCCTTTTCTCGCCCCTTTTTATACTGCAAGGTGCTGCTGTTATTTATGCTGCATCTAGATTGTTAGAGAAAGTTATACTTCTCTTAAGAGGTGGATCAGGCACCGCCCCGCATCTCAGTTTTTCTGCTAGAGCTCATGCCTTCTTGGAGTTCTTTCATCATGGTTCGAGGTGATATCCTTATTTGAGTGTTATCCCTTTCTCTTCCTGAGGTTTTAGCTCTTTTGTGAAGATGATGTTATCAAGTCCATGAAATATGAACTTACTTGATATAGTGAAGACAGGCTATTGGGATGGTGGTCAATTGATGAAGGCAGTAGAGAGGAGCAGGCACGACTGTACCATGAGGGTGCCTCAGGGTTCGTATTTTTTCCCTTCCGAATAGTTTTGTGAGAACTCTACAAACCTGAACGCGTGCGACTGATTGAACATGTGAAAAAATGTTCACTTTTAGAATATCAGCAGGGAGAAGTTCATTGGTTTATTGGGTATGAACAATGCAGGTACAATACGTTTAGTGGATATCCTCCCGAGATTGTGAAGAAGATGCCCAAGAAAGATCTTGCCGAGGAGGTAAGCATCGTTATCGTTATATTCATTTGCTTCGTAATTCATTAAACTATAAGAGTAAATGAGTCGTCGTTGATCTTGTTGATGCTACTGCTAGTTTTATTTGGGCTGTATTTGATCTTCGAAGCTGTCATACAGGTCTGGCGCCTTCAAGCTGCATTAGGGGAGCAAACAGAAATCACCAAATACAGTCAGCAGGAATATGAAAGACTTCAAAATGTAAATTCTCCCCCTTTTCTTCTAGACAGCATTTTTGTGATCTTATTCTATCTTCCCTACTGTCATATCATTATATGCTGAATTCATTGGTACGCCAATGATTTGAACAGGAAAAGGTGTTATGTCGGGTTTGTTTTGAGGGGGAAATTAGCGTGGTTCTTCTTCCATGTAGGCATCGTGTACTATGCAGGTATAACATATGCTATTGAACTAGTGTGTTTGTCTTGAAATTGAGCTATGCAGCCATATCGTTACCTCTTCGAGCTTCACGAACAGTTGTGAATATTATTGCAGTACCTGCTGTGAGAAGTGTAAAAAGTGCCCAATTTGTCGTGTCTGTATCGAAGAACGATTAGCGGTATACGATGTTTAGATCATCCTTAACAAATCTGAAGGCATTGAAGTGAAGTGGTTGTTGATGATGGGTATGCGGGTAAGTGAAGAACTGGAAATGTTGATGGTTCATAATGAATGATTGATAGCTGATAAAGGAAAGCAGTTCGATATAGAAAATGCAGTTCGTCTGTGCTTCAAATGTAAATAATAAGTGGGAATTATAGTAGAAATCTAGTCAGTTACACGTGCACTGCATAATTCAGGCCCTTTTTTTTAGCTTAATTCTCCATGTATAGAATTACTTTAACTTCATTTGTAATCCAAGTTTTTTATGTTCGCCAAACACCAAAACCTCATACTTCTCATATTTCATGACTGAATCTAATTCTTTTGTCAACACTAATTAGCTGGTTTGACCTTGTTTGGTTTGTTTTTTTAATATAATTCCGACG

mRNA sequence

AATGGATCCGCAATTCCCAAAGTTTCGGCTCAAGATTTTTTCCTCTTACGAAAATAAAAATCTCATCCCATCTTCACCTTCCAAATTCTGTTTCCTTTTCGACTATTTTCCTATTCTGGTTCATTATCTTGTTCAAATTGAAGCTACACACATGGAGCAAGCCACCAAATACGGTGGTTGAGAAACGCGGGAGGGTGAGATAAGAATCTTCCATAAACTCTATGAGACCCCGTCACGTCGACATTTGCCTCCTTTGTTTTCCACCACGCCCCCTCCACTTGATTCCATATTTCAAAATTGGAACAAGGAACATGGATTAAAATATTCTCGACTGTGAAATAGAGAGAGAGAGAAAGAGGGGTTTGTTTCCTTTTTCTTTCTCGGTGGTGGAATTAGACCCATCTATCTCCTTTTACTTTATAAATCATTCTTTTAGTGGCTTTCGGAGGAAGTAATCGTTGATAGGGGAAACAAACACAGACGGCGGGGATTGAGATTTGAGAAATTCCGGTCCATTCTTCTTGCCCATTCTTTCCTATTAATACCCAGTTTCTGATTCTTCTTCTTTTTCCGTTTTTGGGTTTTATTCTTTTCAATGGTTTGCATGATGGGTTTTCGAGTTTTTGGGTTTTGAGTGGGGCGTCGAAGAGGGGTGGAGGGCTTTTGAGGTAAAAGCTAGTTTGGGGGCGGAGGAATGACTTGGAGGAGAGTGTTGAAGTCCGTGCAGGCACTTTTGGCCCACGGTTCACTCTTCTGTTTCACGCTCTTGCTCGTTCTCAAGCTCGATCATTTCGTCTCCCACAGTTGGTGGGTTATTTTTTTCCCACTTTGGGTATTTCATGTCGTTGTTGCTCGGGGAAGGTTCTCATTACCTGCCCCATCTCTTCCTCATAATCGCCATTGGGCACCGTGCCATGCCGTTGTCTCCACGCCTTTGCTTGTAACATTTGAATTACTTCTTTGTATATACCTCGAGAGCCTGTCTGTTTATGGTTTTCCTGCTGTGAATTTGAAGATTGTCTTTCTACCGTTGCTGGCTTTTGAAATCATCATTTTAATAGATAATTTCAGAATGTGTAGATCACTAATGCCTGGTGACGACGAAAGCATGAGCGATGAGGCAATATGGGAAACTCTTCCTCACTTTTGGGTTGCTATTTCAATGGTCTTCTTCGTTGCTGCTACAGTGTTTACTCTACTGAAGCTATGTGGGAGTGTTGGTGCTCTTGGCTGGTGGGACTTATTTATTAACTTTGGCATTGCGGAGTGCTTTGCGTTTCTCGTCTGTACAAAGTGGTCTAATCCTGTAATTCATAGAAATATTCAAACAAGAGAAACTTGTTCATCATCAGCCGTAGTTAGATATCTAGATTGGAACAACGGTCTGATGGTTTATCCAGAGCAGGATCAGCATCAAGACAGAATGTGTGGCCTTCAAGACATTGGCGGCCATATCATGAAAATTCCCATAATTGTTTTTCAAGTCCTACTTTGCATGTATTTAGAGGGAACACCTGCGAGCGCAAAACATATACCACTTCCTGTCCTTTTCTCGCCCCTTTTTATACTGCAAGGTGCTGCTGTTATTTATGCTGCATCTAGATTGTTAGAGAAAGTTATACTTCTCTTAAGAGGTGGATCAGGCACCGCCCCGCATCTCAGTTTTTCTGCTAGAGCTCATGCCTTCTTGGAGTTCTTTCATCATGGTTCGAGGCTATTGGGATGGTGGTCAATTGATGAAGGCAGTAGAGAGGAGCAGGCACGACTGTACCATGAGGGTGCCTCAGGGTACAATACGTTTAGTGGATATCCTCCCGAGATTGTGAAGAAGATGCCCAAGAAAGATCTTGCCGAGGAGGTCTGGCGCCTTCAAGCTGCATTAGGGGAGCAAACAGAAATCACCAAATACAGTCAGCAGGAATATGAAAGACTTCAAAATGAAAAGGTGTTATGTCGGGTTTGTTTTGAGGGGGAAATTAGCGTGGTTCTTCTTCCATGTAGGCATCGTGTACTATGCAGTACCTGCTGTGAGAAGTGTAAAAAGTGCCCAATTTGTCGTGTCTGTATCGAAGAACGATTAGCGGTATACGATGTTTAGATCATCCTTAACAAATCTGAAGGCATTGAAGTGAAGTGGTTGTTGATGATGGGTATGCGGGTAAGTGAAGAACTGGAAATGTTGATGGTTCATAATGAATGATTGATAGCTGATAAAGGAAAGCAGTTCGATATAGAAAATGCAGTTCGTCTGTGCTTCAAATGTAAATAATAAGTGGGAATTATAGTAGAAATCTAGTCAGTTACACGTGCACTGCATAATTCAGGCCCTTTTTTTTAGCTTAATTCTCCATGTATAGAATTACTTTAACTTCATTTGTAATCCAAGTTTTTTATGTTCGCCAAACACCAAAACCTCATACTTCTCATATTTCATGACTGAATCTAATTCTTTTGTCAACACTAATTAGCTGGTTTGACCTTGTTTGGTTTGTTTTTTTAATATAATTCCGACG

Coding sequence (CDS)

ATGACTTGGAGGAGAGTGTTGAAGTCCGTGCAGGCACTTTTGGCCCACGGTTCACTCTTCTGTTTCACGCTCTTGCTCGTTCTCAAGCTCGATCATTTCGTCTCCCACAGTTGGTGGGTTATTTTTTTCCCACTTTGGGTATTTCATGTCGTTGTTGCTCGGGGAAGGTTCTCATTACCTGCCCCATCTCTTCCTCATAATCGCCATTGGGCACCGTGCCATGCCGTTGTCTCCACGCCTTTGCTTGTAACATTTGAATTACTTCTTTGTATATACCTCGAGAGCCTGTCTGTTTATGGTTTTCCTGCTGTGAATTTGAAGATTGTCTTTCTACCGTTGCTGGCTTTTGAAATCATCATTTTAATAGATAATTTCAGAATGTGTAGATCACTAATGCCTGGTGACGACGAAAGCATGAGCGATGAGGCAATATGGGAAACTCTTCCTCACTTTTGGGTTGCTATTTCAATGGTCTTCTTCGTTGCTGCTACAGTGTTTACTCTACTGAAGCTATGTGGGAGTGTTGGTGCTCTTGGCTGGTGGGACTTATTTATTAACTTTGGCATTGCGGAGTGCTTTGCGTTTCTCGTCTGTACAAAGTGGTCTAATCCTGTAATTCATAGAAATATTCAAACAAGAGAAACTTGTTCATCATCAGCCGTAGTTAGATATCTAGATTGGAACAACGGTCTGATGGTTTATCCAGAGCAGGATCAGCATCAAGACAGAATGTGTGGCCTTCAAGACATTGGCGGCCATATCATGAAAATTCCCATAATTGTTTTTCAAGTCCTACTTTGCATGTATTTAGAGGGAACACCTGCGAGCGCAAAACATATACCACTTCCTGTCCTTTTCTCGCCCCTTTTTATACTGCAAGGTGCTGCTGTTATTTATGCTGCATCTAGATTGTTAGAGAAAGTTATACTTCTCTTAAGAGGTGGATCAGGCACCGCCCCGCATCTCAGTTTTTCTGCTAGAGCTCATGCCTTCTTGGAGTTCTTTCATCATGGTTCGAGGCTATTGGGATGGTGGTCAATTGATGAAGGCAGTAGAGAGGAGCAGGCACGACTGTACCATGAGGGTGCCTCAGGGTACAATACGTTTAGTGGATATCCTCCCGAGATTGTGAAGAAGATGCCCAAGAAAGATCTTGCCGAGGAGGTCTGGCGCCTTCAAGCTGCATTAGGGGAGCAAACAGAAATCACCAAATACAGTCAGCAGGAATATGAAAGACTTCAAAATGAAAAGGTGTTATGTCGGGTTTGTTTTGAGGGGGAAATTAGCGTGGTTCTTCTTCCATGTAGGCATCGTGTACTATGCAGTACCTGCTGTGAGAAGTGTAAAAAGTGCCCAATTTGTCGTGTCTGTATCGAAGAACGATTAGCGGTATACGATGTTTAG

Protein sequence

MTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVIFFPLWVFHVVVARGRFSLPAPSLPHNRHWAPCHAVVSTPLLVTFELLLCIYLESLSVYGFPAVNLKIVFLPLLAFEIIILIDNFRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLCGSVGALGWWDLFINFGIAECFAFLVCTKWSNPVIHRNIQTRETCSSSAVVRYLDWNNGLMVYPEQDQHQDRMCGLQDIGGHIMKIPIIVFQVLLCMYLEGTPASAKHIPLPVLFSPLFILQGAAVIYAASRLLEKVILLLRGGSGTAPHLSFSARAHAFLEFFHHGSRLLGWWSIDEGSREEQARLYHEGASGYNTFSGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVLCRVCFEGEISVVLLPCRHRVLCSTCCEKCKKCPICRVCIEERLAVYDV

Homology

[Close]

BLAST of CmaCh11G002570 vs. ExPASy Swiss-Prot
Match: Q8W5R5 (Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KIN7D PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.7e-08
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 374  PEIVKKMPKKDLAEE---VWRLQAALGEQTEITKYSQQEYERLQNEKVLCRVCFEGEISV 433
            PE+V     ++  +E   V RL+A + E  E    SQ   +   +   +C+VCFE   + 
Sbjct: 962  PEVVVVAKTEETPKEEPLVARLKARMQEMKEKEMKSQANGDANSH---ICKVCFESPTAA 1021

Query: 434  VLLPCRHRVLCSTCCEKCKKCPICRVCIEERLAVY 466
            +LLPCRH  LC +C   C +CPICR  I +RL  +
Sbjct: 1022 ILLPCRHFCLCKSCSLACSECPICRTKISDRLFAF 1053

[Close]

BLAST of CmaCh11G002570 vs. ExPASy Swiss-Prot
Match: Q7M3S9 (RING finger protein B OS=Dictyostelium discoideum OX=44689 GN=rngB PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-07
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 407 QQEYERLQNEKVLCRVCFEGEISVVLLPCRHRVLCSTCCEKCKKCPICRVCIEERLAVY 466
           ++E ++L+++   C +C     ++VLLPCRH  LCS CC K  KCPICR  IE ++++Y
Sbjct: 885 EKEKDQLKDQN-SCVICASNPPNIVLLPCRHSSLCSDCCSKLTKCPICRSHIENKISIY 942

[Close]

BLAST of CmaCh11G002570 vs. ExPASy Swiss-Prot
Match: Q9SJU0 (Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KIN7M PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-07
Identity = 36/98 (36.73%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 370  SGYPPEIVKKMPKKDLAEE-VWRLQAALGEQTEITKYSQ-QEYERLQNEKVLCRVCFEGE 429
            +G+   IV K  +    E  V RL+A + E  E    SQ            +C+VCFE  
Sbjct: 959  NGHEEVIVAKAEETPKEEPLVARLKARMQEMKEKEMKSQAAAAANADANSHICKVCFESP 1018

Query: 430  ISVVLLPCRHRVLCSTCCEKCKKCPICRVCIEERLAVY 466
             + +LLPCRH  LC +C   C +CPICR  I +RL  +
Sbjct: 1019 TATILLPCRHFCLCKSCSLACSECPICRTKISDRLFAF 1056

[Close]

BLAST of CmaCh11G002570 vs. ExPASy Swiss-Prot
Match: Q5BKL8 (E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis OX=8364 GN=xiap PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.9e-06
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 393 QAALGEQTEITKYSQQEYERLQNEKVLCRVCFEGEISVVLLPCRHRVLCSTCCEKCKKCP 452
           +  L +  EI    +++  +L+ EK+ C+VC +  IS+V +PC H V C+ C +   KCP
Sbjct: 419 ETVLEKPKEIEISLEEKLRQLEEEKI-CKVCMDRRISIVFIPCGHLVACAVCADVLDKCP 478

Query: 453 ICRVCIEERLAVY 466
           IC   +E R  ++
Sbjct: 479 ICCTIVERRQKIF 490

[Close]

BLAST of CmaCh11G002570 vs. ExPASy Swiss-Prot
Match: Q9FW70 (Kinesin-like protein KIN-7K, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=KIN7K PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-06
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 391  RLQAALGEQTEITKYSQQEYERLQNEKVLCRVCFEGEISVVLLPCRHRVLCSTCCEKCKK 450
            RL+A + E  E  K +    ++  N  V C+VCFE   + VLLPCRH  LC  C   C +
Sbjct: 987  RLKAKIQEMKE--KETDSLGDKDGNSHV-CKVCFESATAAVLLPCRHFCLCKPCSLACSE 1046

Query: 451  CPICRVCIEERLAVY 466
            CP+CR  I +R+  +
Sbjct: 1047 CPLCRTRIADRIITF 1058

[Close]

BLAST of CmaCh11G002570 vs. TAIR 10
Match: AT1G18470.1 (Transmembrane Fragile-X-F-associated protein )

HSP 1 Score: 751.5 bits (1939), Expect = 4.0e-217
Identity = 361/467 (77.30%), Postives = 407/467 (87.15%), Query Frame = 0


Query: 1   MTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVIFFPLWVFHVVVARGRFSLP 60
           M+ RRVLKS+QAL AH  LFCFTLLLVLKLDH VS SWW++FFPLW FH VVARGRFSLP
Sbjct: 1   MSCRRVLKSIQALAAHSLLFCFTLLLVLKLDHTVSSSWWMVFFPLWAFHAVVARGRFSLP 60

Query: 61  APSLPHNRHWAPCHAVVSTPLLVTFELLLCIYLESLSVYGFPAVNLKIVFLPLLAFEIII 120
           AP  P NRHWAPCHAVV+TPLLV FELLLCIYLES      PAV+LKI FLPLLAFE+ I
Sbjct: 61  APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYARWPPAVSLKIAFLPLLAFELTI 120

Query: 121 LIDNFRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLCGSVGALGW 180
           L+DN RMCR+LMPGDD+S++D+AIWE LPHFWVAISMVF +AAT FTLLKL G V ALGW
Sbjct: 121 LVDNLRMCRALMPGDDDSITDDAIWEALPHFWVAISMVFTLAATFFTLLKLSGDVVALGW 180

Query: 181 WDLFINFGIAECFAFLVCTKWSNPVIHRNIQTRETCSSSAVVRYLDWNNGLMVYPEQDQH 240
           WDLFINFGIAECFAFLVCTKWSNPVIHR+ + RET SSS  +RYLDWN+GL+V PE+D+H
Sbjct: 181 WDLFINFGIAECFAFLVCTKWSNPVIHRSSRARETGSSSTSIRYLDWNSGLVVAPEEDRH 240

Query: 241 QDRMCGLQDIGGHIMKIPIIVFQVLLCMYLEGTPASAKHIPLPVLFSPLFILQGAAVIYA 300
           QDR CGLQDIGGH++KIP+I+FQV+LCMYLEGTP  AK I +PVLFSPLF+LQG  V++A
Sbjct: 241 QDRWCGLQDIGGHMLKIPVILFQVVLCMYLEGTPERAKDISIPVLFSPLFLLQGLGVLFA 300

Query: 301 ASRLLEKVILLLRGGSGTAPHLSFSARAHAFLEFFHHGSRLLGWWSIDEGSREEQARLYH 360
           AS+LLEK++LLLRG +G   +  FS+ AH  L F HHGSRLLGWWSIDEGSREEQARLY 
Sbjct: 301 ASKLLEKIVLLLRGEAGPGLYFRFSSSAHDCLGFLHHGSRLLGWWSIDEGSREEQARLYF 360

Query: 361 EGASGYNTFSGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVLC 420
           +  SGYNTFSG+PPEIVKKMPK+DLAEEVWRLQAALGEQTEITK+SQQEYERLQNEKVLC
Sbjct: 361 DQESGYNTFSGHPPEIVKKMPKEDLAEEVWRLQAALGEQTEITKFSQQEYERLQNEKVLC 420

Query: 421 RVCFEGEISVVLLPCRHRVLCSTCCEKCKKCPICRVCIEERLAVYDV 468
           RVCFE +IS+VLLPCRHRVLC TC +KC  CPICR+ IE+RL+VYDV
Sbjct: 421 RVCFEKDISLVLLPCRHRVLCRTCADKCTTCPICRIDIEKRLSVYDV 467

[Close]

BLAST of CmaCh11G002570 vs. TAIR 10
Match: AT1G73950.1 (Transmembrane Fragile-X-F-associated protein )

HSP 1 Score: 733.0 bits (1891), Expect = 1.5e-211
Identity = 355/463 (76.67%), Postives = 400/463 (86.39%), Query Frame = 0


Query: 5   RVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVIFFPLWVFHVVVARGRFSLPAPSL 64
           RVLKSVQA +AH  LF FTL LVLKLDH +++SWWV+  PLW FH VVARGRFSLPAP  
Sbjct: 5   RVLKSVQASVAHCFLFSFTLALVLKLDHSITYSWWVVCLPLWAFHAVVARGRFSLPAPIA 64

Query: 65  PHNRHWAPCHAVVSTPLLVTFELLLCIYLESLSVYGFPAVNLKIVFLPLLAFEIIILIDN 124
           P NRHWAPCHA+VSTPLL+ FELLLC+YLE+      PAV+LKIVFLPLLAFE+IIL+DN
Sbjct: 65  PRNRHWAPCHAIVSTPLLIAFELLLCVYLETAYADSPPAVSLKIVFLPLLAFEVIILVDN 124

Query: 125 FRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLCGSVGALGWWDLF 184
            RMCR+LMPGD+ES++DEA+WE LPHFWVAISMVFF+AATVFTLLKL G V ALGWWDLF
Sbjct: 125 ARMCRALMPGDEESVNDEAVWEALPHFWVAISMVFFLAATVFTLLKLSGDVAALGWWDLF 184

Query: 185 INFGIAECFAFLVCTKWSNPVIHRNIQTRETCSSSAVVRYLDWNNGLMVYPEQDQHQDRM 244
           INFGIAECFAFLVCTKWSNPVIHR+ + RET SSS  +RYLDWN+GL V+ E D++QD  
Sbjct: 185 INFGIAECFAFLVCTKWSNPVIHRSSRDRETGSSSTNIRYLDWNSGLGVFSEDDRNQD-T 244

Query: 245 CGLQDIGGHIMKIPIIVFQVLLCMYLEGTPASAKHIPLPVLFSPLFILQGAAVIYAASRL 304
           CGLQDIGGHIMKIP+IVFQV+LCM+LEGTP +AK I +PVLFSPLF+LQG  V++AAS+L
Sbjct: 245 CGLQDIGGHIMKIPLIVFQVVLCMHLEGTPEAAKSISVPVLFSPLFLLQGVGVLFAASKL 304

Query: 305 LEKVILLLRGGSGTAPHLSFSARAHAFLEFFHHGSRLLGWWSIDEGSREEQARLYHEGAS 364
           +EKV+LLLRG   T  +  F +RAH  L F HHGSRLLGWWSIDEGSREE+ARLY +  S
Sbjct: 305 IEKVVLLLRGEDDTGLYFRFLSRAHDCLGFLHHGSRLLGWWSIDEGSREEEARLYFDQES 364

Query: 365 GYNTFSGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVLCRVCF 424
           GYNTF G+PPEIVKKMPKK+LAEEVWRLQAALGEQTEITK+SQQEYERLQNEKVLCRVCF
Sbjct: 365 GYNTFCGHPPEIVKKMPKKELAEEVWRLQAALGEQTEITKFSQQEYERLQNEKVLCRVCF 424

Query: 425 EGEISVVLLPCRHRVLCSTCCEKCKKCPICRVCIEERLAVYDV 468
           E EISVVLLPCRHRVLC  C +KCKKCP CR+ IEERL VYDV
Sbjct: 425 EREISVVLLPCRHRVLCRNCSDKCKKCPFCRITIEERLPVYDV 466

[Close]

BLAST of CmaCh11G002570 vs. TAIR 10
Match: AT1G68820.1 (Transmembrane Fragile-X-F-associated protein )

HSP 1 Score: 691.4 bits (1783), Expect = 4.9e-199
Identity = 341/470 (72.55%), Postives = 390/470 (82.98%), Query Frame = 0


Query: 1   MTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVIFFPLWVFHVVVARGRFSLP 60
           M+WRRV KS QA  AH  LF FTLLL LKLDH VSHSWW +F PLW+FH V+ARGRFSLP
Sbjct: 8   MSWRRVWKSFQAASAHCLLFSFTLLLALKLDHVVSHSWWFVFAPLWLFHAVIARGRFSLP 67

Query: 61  APSLPHNRHWAPCHAVVSTPLLVTFELLLCIYLESLSVYGFPAVNLKIVFLPLLAFEIII 120
           APS+PH+RHWAP H+V++TPLLV FE+LLC++LE   V     V+LKIVFLPLLAFE+ I
Sbjct: 68  APSMPHDRHWAPFHSVMATPLLVAFEILLCVHLEDKYV-----VDLKIVFLPLLAFEVAI 127

Query: 121 LIDNFRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLCGSVGALGW 180
           LIDN RMCR+LMPGD+E+MSDEAIWETLPHFWV+ISMVFF+AAT FTLLKLCG V ALGW
Sbjct: 128 LIDNVRMCRTLMPGDEETMSDEAIWETLPHFWVSISMVFFIAATTFTLLKLCGDVAALGW 187

Query: 181 WDLFINFGIAECFAFLVCTKWSNPVIHRNIQTRETCSSSAVVRYLDWNNGLMVYPEQDQH 240
           WDLFINFGIAECFAFLVCTKWSN  IHR     E  SSS VVRYLDWN GL+V  + D+H
Sbjct: 188 WDLFINFGIAECFAFLVCTKWSNQSIHRYSHIPEPSSSSMVVRYLDWNRGLVVTAD-DEH 247

Query: 241 Q--DRMCGLQDIGGHIMKIPIIVFQVLLCMYLEGTPASAKHIPLPVLFSPLFILQGAAVI 300
           Q  +R+CGLQDIGGH+MKIP + FQ++L M LEGTPASAK+IP+ VLF PLF+LQGA V+
Sbjct: 248 QQSNRICGLQDIGGHVMKIPFVTFQIILFMRLEGTPASAKNIPILVLFVPLFLLQGAGVL 307

Query: 301 YAASRLLEKVILLLRGGSGT-APHLSFSARAHAFLEFFHHGSRLLGWWSIDEGSREEQAR 360
           +A  RL+EK +LL+  GSG+   + + ++ A  FL FF HG+RLLGWWSIDEGSREEQAR
Sbjct: 308 FAMYRLVEKSVLLINSGSGSYGRYFTATSSAREFLGFFQHGARLLGWWSIDEGSREEQAR 367

Query: 361 LYHEGASGYNTFSGYPPEIVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEK 420
           LY   A+GYNTFS   PE+VKKMPK DL EE+WRLQAAL EQT+IT YSQQEYERLQNEK
Sbjct: 368 LYSGEATGYNTFS---PEVVKKMPKSDLVEEIWRLQAALSEQTDITSYSQQEYERLQNEK 427

Query: 421 VLCRVCFEGEISVVLLPCRHRVLCSTCCEKCKKCPICRVCIEERLAVYDV 468
           +LCRVCFE  I+VVLLPCRH VLCSTCCEKCKKCPICRV IEER+ VYDV
Sbjct: 428 ILCRVCFEDPINVVLLPCRHHVLCSTCCEKCKKCPICRVLIEERMPVYDV 468

[Close]

BLAST of CmaCh11G002570 vs. TAIR 10
Match: AT1G18470.2 (Transmembrane Fragile-X-F-associated protein )

HSP 1 Score: 616.7 bits (1589), Expect = 1.5e-176
Identity = 296/389 (76.09%), Postives = 335/389 (86.12%), Query Frame = 0


Query: 1   MTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVIFFPLWVFHVVVARGRFSLP 60
           M+ RRVLKS+QAL AH  LFCFTLLLVLKLDH VS SWW++FFPLW FH VVARGRFSLP
Sbjct: 1   MSCRRVLKSIQALAAHSLLFCFTLLLVLKLDHTVSSSWWMVFFPLWAFHAVVARGRFSLP 60

Query: 61  APSLPHNRHWAPCHAVVSTPLLVTFELLLCIYLESLSVYGFPAVNLKIVFLPLLAFEIII 120
           AP  P NRHWAPCHAVV+TPLLV FELLLCIYLES      PAV+LKI FLPLLAFE+ I
Sbjct: 61  APVAPRNRHWAPCHAVVATPLLVAFELLLCIYLESSYARWPPAVSLKIAFLPLLAFELTI 120

Query: 121 LIDNFRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLCGSVGALGW 180
           L+DN RMCR+LMPGDD+S++D+AIWE LPHFWVAISMVF +AAT FTLLKL G V ALGW
Sbjct: 121 LVDNLRMCRALMPGDDDSITDDAIWEALPHFWVAISMVFTLAATFFTLLKLSGDVVALGW 180

Query: 181 WDLFINFGIAECFAFLVCTKWSNPVIHRNIQTRETCSSSAVVRYLDWNNGLMVYPEQDQH 240
           WDLFINFGIAECFAFLVCTKWSNPVIHR+ + RET SSS  +RYLDWN+GL+V PE+D+H
Sbjct: 181 WDLFINFGIAECFAFLVCTKWSNPVIHRSSRARETGSSSTSIRYLDWNSGLVVAPEEDRH 240

Query: 241 QDRMCGLQDIGGHIMKIPIIVFQVLLCMYLEGTPASAKHIPLPVLFSPLFILQGAAVIYA 300
           QDR CGLQDIGGH++KIP+I+FQV+LCMYLEGTP  AK I +PVLFSPLF+LQG  V++A
Sbjct: 241 QDRWCGLQDIGGHMLKIPVILFQVVLCMYLEGTPERAKDISIPVLFSPLFLLQGLGVLFA 300

Query: 301 ASRLLEKVILLLRGGSGTAPHLSFSARAHAFLEFFHHGSRLLGWWSIDEGSREEQARLYH 360
           AS+LLEK++LLLRG +G   +  FS+ AH  L F HHGSRLLGWWSIDEGSREEQARLY 
Sbjct: 301 ASKLLEKIVLLLRGEAGPGLYFRFSSSAHDCLGFLHHGSRLLGWWSIDEGSREEQARLYF 360

Query: 361 EGASGYNTFSGYPPEIVKKMPKKDLAEEV 390
           +  SGYNTFSG+PPEIVKKMPK+DLAEEV
Sbjct: 361 DQESGYNTFSGHPPEIVKKMPKEDLAEEV 389

[Close]

BLAST of CmaCh11G002570 vs. TAIR 10
Match: AT4G39050.1 (Kinesin motor family protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-09
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 374  PEIVKKMPKKDLAEE---VWRLQAALGEQTEITKYSQQEYERLQNEKVLCRVCFEGEISV 433
            PE+V     ++  +E   V RL+A + E  E    SQ   +   +   +C+VCFE   + 
Sbjct: 962  PEVVVVAKTEETPKEEPLVARLKARMQEMKEKEMKSQANGDANSH---ICKVCFESPTAA 1021

Query: 434  VLLPCRHRVLCSTCCEKCKKCPICRVCIEERLAVY 466
            +LLPCRH  LC +C   C +CPICR  I +RL  +
Sbjct: 1022 ILLPCRHFCLCKSCSLACSECPICRTKISDRLFAF 1053

The following BLAST results are available for this feature:

BLAST of CmaCh11G002570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W5R5	2.7e-08	36.84	Kinesin-like protein KIN-7D, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=KI...	[more]
Q7M3S9	1.3e-07	44.07	RING finger protein B OS=Dictyostelium discoideum OX=44689 GN=rngB PE=2 SV=2	[more]
Q9SJU0	1.7e-07	36.73	Kinesin-like protein KIN-7M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=KI...	[more]
Q5BKL8	1.9e-06	34.25	E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis OX=8364 GN=xiap PE=2 SV=1	[more]
Q9FW70	2.5e-06	40.00	Kinesin-like protein KIN-7K, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of CmaCh11G002570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18470.1	4.0e-217	77.30	Transmembrane Fragile-X-F-associated protein	[more]
AT1G73950.1	1.5e-211	76.67	Transmembrane Fragile-X-F-associated protein	[more]
AT1G68820.1	4.9e-199	72.55	Transmembrane Fragile-X-F-associated protein	[more]
AT1G18470.2	1.5e-176	76.09	Transmembrane Fragile-X-F-associated protein	[more]
AT4G39050.1	1.9e-09	36.84	Kinesin motor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019396	Transmembrane Fragile-X-F-associated protein	PFAM	PF10269	Tmemb_185A	coord: 28..292 e-value: 2.7E-96 score: 322.1
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 417..460 e-value: 3.9E-9 score: 36.2
None	No IPR available	PANTHER	PTHR46859	TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN	coord: 1..467
None	No IPR available	PANTHER	PTHR46859:SF3	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 1..467
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 411..461
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 396..466 e-value: 1.5E-14 score: 55.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 420..455 score: 10.807436

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G002570.1	CmaCh11G002570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane