CmaCh11G002470 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G002470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	translation initiation factor eIF-2B subunit delta-like isoform X1
Location	Cma_Chr11: 1252220 .. 1259014 (+)
RNA-Seq Expression	CmaCh11G002470
Synteny	CmaCh11G002470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTGTGAATTGGGTAATGTTAAAATTGATTGACTCGTGGCGGTAAAAGAAGAAGAGAAGATGAAAGTAGAGCAGACGCGAGCGATTGATAAGCCCTTGCTTCCTTTCTGTGTTCTTCTGATTCAGTTGACTATGGCTGTGGCTATGGCGGACGCTACAGAAGCTGCCAATTAAGCTTCCCTGCAGTGAACCCATTTCTTCTCTTTCTCTGTTTATGTGGATTCTTGTAATTCTGATGCCATATTATTCGCGTTAAGTCTTCATGGATGCTCGGCGAGGATCCCGCGTCGTCAAACCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACGCTCCAAACCCCCCCGGACGCTCCCTATCCGGTCCGGTCGGCTTTGGTTCTTCTCAACAATCCCTCTCTCCTCCCACCGATCCCTTGTCTCCGGTCATGATTCCTCCTCCTCGTCATCTCTCCGATAACTTTGCCTCACGCTCTACTATTCTTCCTGTTCCGACTCCGGCCAATTGGAGGAATTCCGGTGATCAGATTCATGTTGGCAGTTATAACCCTTCCCAGACCCTGCTTGCGACTTCTCCTTCGAGTAGAATTTGGGACGATGAGCTGGAGATGTCCGAGGATTCTTCCACCTCCGTTCCGTATCGCCGGAGTGGTTCCGGGAAGATTGCGTCGAGCCTTCCTGGCCTTGGAGTCCACATGGCGGCTAAGTCGTCTGAGAATTCGCAGGCGGTGCCTCTCAGGACGCTGGGACCTAATAAGCCTTCTGGAGTTGCAGGTGATACTGCATTCCTAATCCTTACTTATTTCCCCCTTTTCTTTGATGCAAGGGGGATTTTGTTAATGTGTGCCAATTTTGAGTCTGTACTTTTCCTTTTTGAGGTGCAGCATTTTAGTGCAGCATTGACTTTATACATCTAATTATTACGCTTTCTGCTATGCATTTCTTTTTCATATCAGTTGGAAGATGGGGCTGTGGCCGTGTTTCCATGTCTTGCACTTTACTGAATCCATTCGGTGCTCTTTTTTTGTTTATTTTTTTCTTTTCTTGTTTGGATACATTCAGCTTTTACTGGCGTCTCCGAGAAGCTCTCCTAACTTCATTAAACAAGTTTTTGAAGGCAGATTGAAGGCCAGAGTTTAACTTTCAGTTGCTCTATAGCTATATTTTTGGGGTATATGGATTGATAGAAGCTAGGATATTGATGGAAGGGGTAGGAACTTTTATGTTTTTTGGACTGGGTATGGTTTTTTTCTCTTCATTTAGTTCCCTTTCTAAACATTTCTGCATTTATTTTTTGGCTGCTATCCTTGCCAATTGGAGTGTGTTTTTGAGGGGATAGTGCTTTTTGGGAGAATATCGTGTCCTCTCCTCTGTATATTCCTTTTAGTTGTTGAAATTTAGTTTCTTACCATAACAGAAAAGAAAGGAAAAAATGGGTATGCTTATTGTAAGTTATAGCTATTTATAAATAGCAGGCTAGAATCTCATTTCAGATTCTGATATCCGCAAAAAACCCCTGTATAGTCGAACTTCAAGCTAACCCAAGATGACTTCCTACTGCTGCCCTGTGCCAAACTCTCATACTAAATATATTTTAGTTATTTTGTTCATACTGATATCGCTTATACAATGGTATGCATTTCCTATTTTAGTGGAGTTTCTTACTTTTCTGTGCTAGTTAATTGTTTTCTCAAGAGTGCTACCACCAGATCATGAATGCACATTCAAGGTTGATGTAATTAGAAAGAGGGGCCTTGTTTTAATTTTAGAAGATTTTTTATTTAAATAAATGTTTGTATGAGCCTTTGATTCACGTTTAATGGATAATGAAGAACCATTTTCCCTGTTTAGAGTTGAACTTTGCGCAGTTTTATTGTTTGAGAGAGTTCGGAGAAGAAAATAGAAAGGATCATGAAGAAAAGAAAGGACAGGGTAACTATGGAATTGTATGGTTCTTCAAGAAAGAGGTATGGAATTGAAAAGAGTAAAGGAAGGGGAATCACCGGGAGTTGGTACATTGTCCTAAAGGGCTAACTGGATGATGCTTTGGAGATTATGAATTCAATAAAACTATGACAAAATTGTTCATTATGTAGAACTAGCAATAACGACTGTAAAGCATCATCAACTATTCTACTTCTCTGTTGGAACTTGTCAATTTTTTTCTGATTCTGTCATGCTTGCATGGTCTGGTTATAGTGCCCAATTTTGAACTCCGTTCATATCGAGGAGCCAAAACATTTCTTAGAATGAGGGATTAAAAGGGAAAACAACAATGAAATTCTGCATGGCTGTGAACATCCAAATTTACTTTCTTATGGAACGTGCATTGGGTTACTAGGTTCTCATTTCTACTACTTTGCTCTTGCAGAAAATAATGGAGGGGTGCCCACAGAGGTGCAAAATCAACCACCGCCATCAAGTTCAAAATCCCTGAAGGCAAAAACAACGAAGGCTGAAAGACGGGCTCTGCAGGAGGCACAACGAGCAGCAAAAGTTTCTGCAAAAGGTTTTATTCCATTTCAATCATTTGAAATGTACCATGAACTATATTGCTAATTATCTTGCTAGAAAGTGAACACTTTTTGAATCAAGAAATGTAGAGGGTTAAGTGGAATTAGTTTAGTGCATTGTACATGGAAGTATTTGTACACTCCTTGACTCGTGCTCTTAAAAATTTCTAATTTCTGGATTTGCTATTGCATGGGTAATTTGTTTTAACGGGTCATTCTATCTGGTTATGAATGCTAATAATTATCCTTTTTCCCTTTCTTTGGATTTTTATGTGACAGAAAAATTTTGAGGGCTCATATAATTACTAGTTCATTTGTTTTATTTATTTATTTATTTTCTTAATTTTTCATATGTTTATTGGTTCTCTAAAAGGTGAGACGAATAAGTCAGGTACTGCTCCTGGTAAAACTGTGAAGCAGCCTTCGGCTATGAAAGATAGCACTGCTGCACCTTCGGTTGCATCTACTGATAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCGCCCCATCCACGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAACGAGCAGTTTTCAACCAAACTGAAGCTCGAAATAGGGTTGAATTATTTCGCCATTTGCCTCAATATGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCGAAGTTTTTCCAACTTGACACCATTCATCCTGCCATTTACAAGGTTGTTTTCTCTTTCTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGAAAACTACCTAATACAGTTTTGTTTTGTCTCAAGATTCTTACTTTTCCCATTCCAGATGAAAATCTCATAGCTTCGCCCCTGTTTGATTAGAACTGTTATGTTTTAAGATTTCATATTGATGATCTATGACGATAGTTTTGTTTTTATGGGACTTTATACACTCTAACATGATGATTTAAACGTATGGATGGCCTCTTTATTATATATATATATATATATATATATATATACATATGGTCGTCAATTTATAGTATTTCTGATAAATTTTCTGACTAGTGTTTGTCTAATTTAGTCGCATACCTATACTCTTATCAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCTATGCTTCATGCCTTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAATCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATTCAATTAGGTTTCTGAAGAACCGCATTGCCAAATTACCAGTGAATCTTCTGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATTGATCGCTTTATCAATGAGAAGATTATCATTGCAGATGAGGTCATAGTTAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCACATGAACTCGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTAATAGCAAGCGGCCTAAAGTGTACCTACACTCATATAAATGCTATTTCTTACGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTGTCTAATGGAACTGTATATTCTAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTGCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTACATATTGTTATGTCATCTTCTCTCTTATTTCCTTCCAGAAGAGGGTAAAGGGACAATGTCTAAGCATTTNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGAAAACTACCTAATACAGTTTTGTTTTGTCTCAAGATTCTTACTTTTCCCATTCCAGATGAAAATCTCATAGCTTCGCCCCTGTTTGATTAGAACTGTTATGTTTTAAGATTTCATATTGATGATCTATGACGATAGTTTTGTTTTTATGGGACTTTATACACTCTAACATGATGATTTAAACGTATGGATGGCCTCTTTATTATATATATATATATATATATATATATATACATATGGTCGTCAATTTATAGTATTTCTGATAAATTTTCTGACTAGTGTTTGTCTAATTTAGTCGCATACCTATACTCTTATCAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCTATGCTTCATGCCTTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAATCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATTCAATTAGGTTTCTGAAGAACCGCATTGCCAAATTACCAGTGAATCTTCTGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATTGATCGCTTTATCAATGAGAAGATTATCATTGCAGATGAGGTCATAGTTAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCACATGAACTCGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTAATAGCAAGCGGCCTAAAGTGTACCTACACTCATATAAATGCTATTTCTTACGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTGTCTAATGGAACTGTATATTCTAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTGCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTACATATTGTTATGTCATCTTCTCTCTTATTTCCTTCCAGAAGAGGGTAAAGGGACAATGTCTAAGCATTTTGAAATTTCCTGCAGGTGATCCAGATGCTATCTCAAAGGTCCCAGGAAGGAAGGATGTTAATTATCTAGATAATTTGACTGCTAAAGAACAACTGCAATGTCTAAATTTAATGTAAATCAACCAACATATTATAATCAGTCATTGTACCTCAAAAGTGTTGCATTCTAACTTTGTCTTGTACTATTTCAGGTATGATGCTACACCTTCAGATTATGTCTCAATGATTGTCACAGATTATGGCATGGTAAGCTTTGCTCAATCACTATTACTCTCTTTCTGTCTCAGGCACTTGTTTAGATACATATTATAATCAGTTATTGTACCTCAAAGGGGTTAAGTTTTGAGTTTTGGCTTCTTTGTCGAAGGAAGCCGAAACTCATGAGATTGATGCTTCTGATCCTTGGCTCATTCAGATGAAGGTTGAAATTGAGATAATTAGGTGGTCAAGCATCTAGGTTCTTTATTGTTGACTTCTTCTTTTCACGTTGGAAAGCAAACCACCTTTTGGGATATAAGTTCTGTTTGGTTAAACAAACTACGCTCTAATCCTTTCACTGTTATAAGATCATACTCATGTCCATTATGAATGCCACTTTGCACTGTCGTCTATACTCTTATTTGGATGATTGAGTACTGCTGATTCTTGACATTCCAATGGTCAGAATTGAGAAGGTAGTTTTGGGTTTTGCAGTCTTGAGTGAAACTTGTTTTCTTATTGTTCTGAACTGTAGATCCCGCCTACAAGTGTACCCGTGATCGTACGCGAGTATCGGAGAGAGCACCTGTGGATTTAAGGACTTCATTTGTAAGGAAGCTTATTTTTGCAAGGATGAATCATAGATGTTTGTTGCCGAAGCATGCTGCCAGAAGTTTTTACATTCAAAATCTGCAACTATATTTTAATTTTTAGTAAACTAACGGTTAGATAAGAGTGTGATTGTTGCTTCTCCTTACACTTTTCCAAGCGTGCTTTTTTCTGGGAGAATGTATTATGGGTACGGTTTGAAAGTCGTCGTCAATAATGTCAATGAAAATGTCGATATCTTGAAATTTATAGAATGGTTTGAATTTATAAATAAAACTTTAATTATTGCTTAACTAGACTATAAGTGGCTATTTAGATTGAATATTATGATTGTTGATAATGTACTATAA

mRNA sequence

AATTTGTGAATTGGGTAATGTTAAAATTGATTGACTCGTGGCGGTAAAAGAAGAAGAGAAGATGAAAGTAGAGCAGACGCGAGCGATTGATAAGCCCTTGCTTCCTTTCTGTGTTCTTCTGATTCAGTTGACTATGGCTGTGGCTATGGCGGACGCTACAGAAGCTGCCAATTAAGCTTCCCTGCAGTGAACCCATTTCTTCTCTTTCTCTGTTTATGTGGATTCTTGTAATTCTGATGCCATATTATTCGCGTTAAGTCTTCATGGATGCTCGGCGAGGATCCCGCGTCGTCAAACCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACGCTCCAAACCCCCCCGGACGCTCCCTATCCGGTCCGGTCGGCTTTGGTTCTTCTCAACAATCCCTCTCTCCTCCCACCGATCCCTTGTCTCCGGTCATGATTCCTCCTCCTCGTCATCTCTCCGATAACTTTGCCTCACGCTCTACTATTCTTCCTGTTCCGACTCCGGCCAATTGGAGGAATTCCGGTGATCAGATTCATGTTGGCAGTTATAACCCTTCCCAGACCCTGCTTGCGACTTCTCCTTCGAGTAGAATTTGGGACGATGAGCTGGAGATGTCCGAGGATTCTTCCACCTCCGTTCCGTATCGCCGGAGTGGTTCCGGGAAGATTGCGTCGAGCCTTCCTGGCCTTGGAGTCCACATGGCGGCTAAGTCGTCTGAGAATTCGCAGGCGGTGCCTCTCAGGACGCTGGGACCTAATAAGCCTTCTGGAGTTGCAGAAAATAATGGAGGGGTGCCCACAGAGGTGCAAAATCAACCACCGCCATCAAGTTCAAAATCCCTGAAGGCAAAAACAACGAAGGCTGAAAGACGGGCTCTGCAGGAGGCACAACGAGCAGCAAAAGTTTCTGCAAAAGGTGAGACGAATAAGTCAGGTACTGCTCCTGGTAAAACTGTGAAGCAGCCTTCGGCTATGAAAGATAGCACTGCTGCACCTTCGGTTGCATCTACTGATAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCGCCCCATCCACGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAACGAGCAGTTTTCAACCAAACTGAAGCTCGAAATAGGGTTGAATTATTTCGCCATTTGCCTCAATATGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCGAAGTTTTTCCAACTTGACACCATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCTATGCTTCATGCCTTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAATCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATTCAATTAGGTTTCTGAAGAACCGCATTGCCAAATTACCAGTGAATCTTCTGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATTGATCGCTTTATCAATGAGAAGATTATCATTGCAGATGAGGTCATAGTTAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCACATGAACTCGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTAATAGCAAGCGGCCTAAAGTGTACCTACACTCATATAAATGCTATTTCTTACGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTGTCTAATGGAACTGTATATTCTAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTGCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGTCGCATACCTATACTCTTATCAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCTATGCTTCATGCCTTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAATCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATTCAATTAGGTTTCTGAAGAACCGCATTGCCAAATTACCAGTGAATCTTCTGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATTGATCGCTTTATCAATGAGAAGATTATCATTGCAGATGAGGTCATAGTTAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCACATGAACTCGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTAATAGCAAGCGGCCTAAAGTGTACCTACACTCATATAAATGCTATTTCTTACGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTGTCTAATGGAACTGTATATTCTAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTGCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTGATCCAGATGCTATCTCAAAGGTCCCAGGAAGGAAGGATGTTAATTATCTAGATAATTTGACTGCTAAAGAACAACTGCAATGTCTAAATTTAATGTATGATGCTACACCTTCAGATTATGTCTCAATGATTGTCACAGATTATGGCATGGTGGTCAAGCATCTAGATCCCGCCTACAAGTGTACCCGTGATCGTACGCGAGTATCGGAGAGAGCACCTGTGGATTTAAGGACTTCATTTGTAAGGAAGCTTATTTTTGCAAGGATGAATCATAGATGTTTGTTGCCGAAGCATGCTGCCAGAAGTTTTTACATTCAAAATCTGCAACTATATTTTAATTTTTAGTAAACTAACGGTTAGATAAGAGTGTGATTGTTGCTTCTCCTTACACTTTTCCAAGCGTGCTTTTTTCTGGGAGAATGTATTATGGGTACGGTTTGAAAGTCGTCGTCAATAATGTCAATGAAAATGTCGATATCTTGAAATTTATAGAATGGTTTGAATTTATAAATAAAACTTTAATTATTGCTTAACTAGACTATAAGTGGCTATTTAGATTGAATATTATGATTGTTGATAATGTACTATAA

Coding sequence (CDS)

ATGGATGCTCGGCGAGGATCCCGCGTCGTCAAACCCAAAGTTCGTCAGGTCGGATTCTTCACCCTCGACGCTCCAAACCCCCCCGGACGCTCCCTATCCGGTCCGGTCGGCTTTGGTTCTTCTCAACAATCCCTCTCTCCTCCCACCGATCCCTTGTCTCCGGTCATGATTCCTCCTCCTCGTCATCTCTCCGATAACTTTGCCTCACGCTCTACTATTCTTCCTGTTCCGACTCCGGCCAATTGGAGGAATTCCGGTGATCAGATTCATGTTGGCAGTTATAACCCTTCCCAGACCCTGCTTGCGACTTCTCCTTCGAGTAGAATTTGGGACGATGAGCTGGAGATGTCCGAGGATTCTTCCACCTCCGTTCCGTATCGCCGGAGTGGTTCCGGGAAGATTGCGTCGAGCCTTCCTGGCCTTGGAGTCCACATGGCGGCTAAGTCGTCTGAGAATTCGCAGGCGGTGCCTCTCAGGACGCTGGGACCTAATAAGCCTTCTGGAGTTGCAGAAAATAATGGAGGGGTGCCCACAGAGGTGCAAAATCAACCACCGCCATCAAGTTCAAAATCCCTGAAGGCAAAAACAACGAAGGCTGAAAGACGGGCTCTGCAGGAGGCACAACGAGCAGCAAAAGTTTCTGCAAAAGGTGAGACGAATAAGTCAGGTACTGCTCCTGGTAAAACTGTGAAGCAGCCTTCGGCTATGAAAGATAGCACTGCTGCACCTTCGGTTGCATCTACTGATAAAAGAGGAGGTGATCGCACACTTGATAAAGAAAGGAAGAAAGATGCGCCCCATCCACGAATGCAGTTTGATGATAAAAATAGGGTAGAAAAGGCTAAAAAACGAGCAGTTTTCAACCAAACTGAAGCTCGAAATAGGGTTGAATTATTTCGCCATTTGCCTCAATATGAGCAGGGAACTCAGCTTCCTGATCTTGTGTCGAAGTTTTTCCAACTTGACACCATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCTATGCTTCATGCCTTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAATCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATTCAATTAGGTTTCTGAAGAACCGCATTGCCAAATTACCAGTGAATCTTCTGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATTGATCGCTTTATCAATGAGAAGATTATCATTGCAGATGAGGTCATAGTTAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCACATGAACTCGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTAATAGCAAGCGGCCTAAAGTGTACCTACACTCATATAAATGCTATTTCTTACGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTGTCTAATGGAACTGTATATTCTAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTGCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGTCGCATACCTATACTCTTATCAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGCTGTATTGCTATGCTTCATGCCTTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAATCTCTGGGTAGAGATTTAACTGCAAAAATTGGTGGCTATGTGTCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATTCAATTAGGTTTCTGAAGAACCGCATTGCCAAATTACCAGTGAATCTTCTGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATTGATCGCTTTATCAATGAGAAGATTATCATTGCAGATGAGGTCATAGTTAGACATGCTGCTACTAAAATCAGGGATGGAGATGTTCTTCTCACATATGGATCATCATGTGCTGTAGAGATGCTTCTATTATATGCACATGAACTCGGAAAAGAATTCCGTGTTGTGGTGGTGGATTCCCGACCAAAACTGGAAGGGCAAGCATTGCTTCGTAGGCTAATAGCAAGCGGCCTAAAGTGTACCTACACTCATATAAATGCTATTTCTTACGTGATGCACGAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTGTCTAATGGAACTGTATATTCTAGAGTGGGAACTGCAGGTGTTGCCATGGTTGCTAATGCATTCCATGTGCCAGTCTTAATCTGCTGCGAAGCCTATAAATTTCATGAAAGGGTACAGCTTGACTCAATATGTTTCAATGAATTAGGTGATCCAGATGCTATCTCAAAGGTCCCAGGAAGGAAGGATGTTAATTATCTAGATAATTTGACTGCTAAAGAACAACTGCAATGTCTAAATTTAATGTATGATGCTACACCTTCAGATTATGTCTCAATGATTGTCACAGATTATGGCATGGTGGTCAAGCATCTAGATCCCGCCTACAAGTGTACCCGTGATCGTACGCGAGTATCGGAGAGAGCACCTGTGGATTTAAGGACTTCATTTGTAAGGAAGCTTATTTTTGCAAGGATGAATCATAGATGTTTGTTGCCGAAGCATGCTGCCAGAAGTTTTTACATTCAAAATCTGCAACTATATTTTAATTTTTAG

Protein sequence

MDARRGSRVVKPKVRQVGFFTLDAPNPPGRSLSGPVGFGSSQQSLSPPTDPLSPVMIPPPRHLSDNFASRSTILPVPTPANWRNSGDQIHVGSYNPSQTLLATSPSSRIWDDELEMSEDSSTSVPYRRSGSGKIASSLPGLGVHMAAKSSENSQAVPLRTLGPNKPSGVAENNGGVPTEVQNQPPPSSSKSLKAKTTKAERRALQEAQRAAKVSAKGETNKSGTAPGKTVKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKDAPHPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNSIRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELVAYLYSYQVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNSIRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPGRKDVNYLDNLTAKEQLQCLNLMYDATPSDYVSMIVTDYGMVVKHLDPAYKCTRDRTRVSERAPVDLRTSFVRKLIFARMNHRCLLPKHAARSFYIQNLQLYFNF

Homology

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BLAST of CmaCh11G002470 vs. ExPASy Swiss-Prot
Match: Q61749 (Translation initiation factor eIF-2B subunit delta OS=Mus musculus OX=10090 GN=Eif2b4 PE=1 SV=2)

HSP 1 Score: 288.1 bits (736), Expect = 3.6e-76
Identity = 171/381 (44.88%), Postives = 233/381 (61.15%), Query Frame = 0


Query: 198 KAERRALQEAQRAAKVSAKGETNKSGTAPGKTVKQPSAMKDSTAAPSVASTDKRGGDRTL 257
           +AERRA QEA+RA K + KGE  + G  P              A PS A     G  R  
Sbjct: 101 RAERRAKQEAERALKQARKGE--QGGVPP-------------QACPSTAGETTSGVKRVP 160

Query: 258 DKERKKDAPHPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSK 317
           +     D   P +    +  + K  ++ V  + +  ++V LF HLPQY + + L   +S 
Sbjct: 161 EHTPADD---PTLL---RRLLRKPDRQQVPTRKDYGSKVSLFSHLPQYSRQSSLTQYMS- 220

Query: 318 FFQLDTIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKI 377
                 IHPA+ ++GLQY  G I G NARCIA+LHA QQ I+DY+TPP + L RDL  K+
Sbjct: 221 -IPSSVIHPAMVRLGLQYSQGLISGSNARCIALLHALQQVIQDYTTPPSEELSRDLVNKL 280

Query: 378 GGYVSFFNECRPLSVSMGNSIRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIAD 437
             Y+SF  +CRP+S SM N+I+FL   +  +  +  E E K+ L   +DR++ EKI++A 
Sbjct: 281 KPYISFLTQCRPMSASMCNAIKFLTKEVTGMSSSKREEEAKSELREALDRYVQEKIVLAA 340

Query: 438 EVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRL 497
           + I R A+TKI DGDV+L YG S  V  +L  A   G+ FRVVVVDSRP+LEG+ +L  L
Sbjct: 341 QAISRFASTKISDGDVILVYGCSSLVSRILQEARVEGRRFRVVVVDSRPRLEGRHMLHSL 400

Query: 498 IASGLKCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLI 557
           + +G+  +Y  I A SYV+ EV++V LGA A+L+NG+V SRVGTA +A+VA A +VPVL+
Sbjct: 401 VRAGVPTSYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLV 458

Query: 558 CCEAYKFHERVQLDSICFNEL 579
           CCE YKF ERVQ D+   NEL
Sbjct: 461 CCETYKFCERVQTDAFVSNEL 458

[Close]

BLAST of CmaCh11G002470 vs. ExPASy Swiss-Prot
Match: P41111 (Translation initiation factor eIF-2B subunit delta OS=Oryctolagus cuniculus OX=9986 GN=EIF2B4 PE=2 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 6.1e-76
Identity = 178/411 (43.31%), Postives = 243/411 (59.12%), Query Frame = 0


Query: 177 PTEVQNQPPPSSSKSLKAKTT---------KAERRALQEAQRAAKVSAKGETNKSGTAPG 236
           P   +  P P S  S   +           +AERRA QEA+RA K + KGE  + G  P 
Sbjct: 70  PGPAREAPGPGSQSSTPGEKVPAGRTKAELRAERRAKQEAERALKQARKGE--QGGPPP- 129

Query: 237 KTVKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKDAPHPRMQFDDKNRVEKAKKRAVF 296
                        A+PS A     GG R  +  +  D   P +    +  V K++++ V 
Sbjct: 130 ------------QASPSTAGEAPAGGKRLTEHTQADD---PTLL---RRLVRKSERQQVP 189

Query: 297 NQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDICGGNARC 356
            + +  ++V LF HLPQY +   L   +S       IHPA+ ++GLQY  G I G NARC
Sbjct: 190 TRKDYGSKVSLFSHLPQYSRQNSLTQYMS--IPSSVIHPAMVRLGLQYSQGLISGSNARC 249

Query: 357 IAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNSIRFLKNRIAK 416
           IA+L A QQ I+DY+TPP + L RDL  K+  Y+ F  +CRPLS SM N+I+FL   I  
Sbjct: 250 IALLRALQQVIQDYTTPPNEELSRDLVNKLKPYICFLTQCRPLSASMYNAIKFLNKEITG 309

Query: 417 LPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLL 476
           +     E E KA L +  DR++ EKI++A + I+R A+ KI +GDV+L YG S  V  +L
Sbjct: 310 VSSTKREEEAKAELQAAADRYVQEKIVLAAQAILRFASKKISNGDVILVYGCSSLVSRIL 369

Query: 477 LYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTHINAISYVMHEVTRVFLGAA 536
             A   G++FRVVVVDSRP+LEG+ +LR L+ +G+  +Y  I A SYV+ EV++V LGA 
Sbjct: 370 QEAWSEGRKFRVVVVDSRPRLEGRHMLRFLVRAGVPASYLLIPAASYVLPEVSKVLLGAH 429

Query: 537 AVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNEL 579
           A+L+NG+V SRVGTA +A+VA A +VPVL+CCE YKF ERVQ D+   NEL
Sbjct: 430 ALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNEL 457

[Close]

BLAST of CmaCh11G002470 vs. ExPASy Swiss-Prot
Match: Q9UI10 (Translation initiation factor eIF-2B subunit delta OS=Homo sapiens OX=9606 GN=EIF2B4 PE=1 SV=2)

HSP 1 Score: 280.8 bits (717), Expect = 5.7e-74
Identity = 181/418 (43.30%), Postives = 245/418 (58.61%), Query Frame = 0


Query: 161 LGPNKPSGVAENNGGVPTEVQNQPPPSSSKSLKAKTTKAERRALQEAQRAAKVSAKGETN 220
           +GP +    +    G P E   + P   SK+      +AERRA QEA+RA K + KGE  
Sbjct: 71  VGPTRELPESGIQLGTPRE---KVPAGRSKA----ELRAERRAKQEAERALKQARKGE-- 130

Query: 221 KSGTAPGKTVKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKDAPHPRMQFDDKNRVEK 280
             G  P K            A+PS A     G  R  +  +  D    R+       V+K
Sbjct: 131 -QGGPPPK------------ASPSTAGETPSGVKRLPEYPQVDDLLLRRL-------VKK 190

Query: 281 AKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMAGDI 340
            +++ V  + +  ++V LF HLPQY +   L   +S       IHPA+ ++GLQY  G +
Sbjct: 191 PERQQVPTRKDYGSKVSLFSHLPQYSRQNSLTQFMS--IPSSVIHPAMVRLGLQYSQGLV 250

Query: 341 CGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNSIRF 400
            G NARCIA+L A QQ I+DY+TPP + L RDL  K+  Y+SF  +CRPLS SM N+I+F
Sbjct: 251 SGSNARCIALLRALQQVIQDYTTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKF 310

Query: 401 LKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSS 460
           L   I  +  +  E E K+ L + IDR++ EKI++A + I R A  KI +GDV+L YG S
Sbjct: 311 LNKEITSVGSSKREEEAKSELRAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCS 370

Query: 461 CAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTHINAISYVMHEVT 520
             V  +L  A   G+ FRVVVVDSRP LEG+  LR L+ +G+  +Y  I A SYV+ EV+
Sbjct: 371 SLVSRILQEAWTEGRRFRVVVVDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVS 430

Query: 521 RVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNEL 579
           +V LGA A+L+NG+V SRVGTA +A+VA A +VPVL+CCE YKF ERVQ D+   NEL
Sbjct: 431 KVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNEL 457

[Close]

BLAST of CmaCh11G002470 vs. ExPASy Swiss-Prot
Match: Q63186 (Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 2.2e-73
Identity = 187/482 (38.80%), Postives = 266/482 (55.19%), Query Frame = 0


Query: 97  SQTLLATSPSSRIWDDELEMSEDSSTSVPYRRSGSGKIASSLPGLGVHMAAKSSENSQAV 156
           S++ + T  S R      E++++    +   +    K      G    + +  S   +  
Sbjct: 12  SRSEMKTELSPRPGAAGRELTQEEKLQLRKEKKQQKKKRKEEKGADQEIGSAVSAAQRQD 71

Query: 157 PLRTLGPNKPSGVAENNGGVPTEVQNQPPPSSSKSLKAKTTKAERRALQEAQRAAKVSAK 216
           P+R L      G     GG   E   + P   SK+      +AERRA QEA+RA K + K
Sbjct: 72  PVREL-----QGTGSQLGGTTGE---KLPAGRSKA----ELRAERRAKQEAERALKQARK 131

Query: 217 GETNKSGTAPGKTVKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKDAPHPRMQFDDKN 276
           GE  + G +P              A PS A     G  R  +  +  D   P +    + 
Sbjct: 132 GE--QGGPSP-------------QACPSTAGEATSGVKRVPEHTQADD---PTLL---RR 191

Query: 277 RVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYM 336
            + K  ++ V  + +  ++V LF HLPQY + + L   +S       IHPA+ ++GLQY 
Sbjct: 192 LLRKPDRQQVPTRKDYGSKVSLFSHLPQYSRQSSLTQYMS--IPSSVIHPAMVRLGLQYS 251

Query: 337 AGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGN 396
            G + G NARCIA+LHA QQ I+DY+TPP + L RDL  K+  Y+SF  +CRP+S SM N
Sbjct: 252 QGLVSGSNARCIALLHALQQVIQDYTTPPNEELSRDLVNKLKPYISFLTQCRPMSASMCN 311

Query: 397 SIRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLT 456
           +I+F    +  +  +  E E K+ L   IDR++ EKI++A + I R A+ KI DGDV+L 
Sbjct: 312 AIKFFNKEVTGMSSSKREEEAKSELKEAIDRYVQEKIVLASQAISRFASKKISDGDVILV 371

Query: 457 YGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTHINAISYVM 516
           YG S  V  +L  A   G+ FRVVVVDSRP+LEG+ +L  L+ +G+  +Y  I A SYV+
Sbjct: 372 YGCSSLVSRILQEAWVEGRRFRVVVVDSRPRLEGRHMLHCLVRAGVPTSYLLIPAASYVL 431

Query: 517 HEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFN 576
            EV++V LGA A+L+NG+V SRVGTA +A+VA A +VPVL+CCE YKF ERVQ D+   N
Sbjct: 432 PEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSN 458

Query: 577 EL 579
           EL
Sbjct: 492 EL 458

[Close]

BLAST of CmaCh11G002470 vs. ExPASy Swiss-Prot
Match: Q3T058 (Translation initiation factor eIF-2B subunit delta OS=Bos taurus OX=9913 GN=EIF2B4 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 2.4e-72
Identity = 182/434 (41.94%), Postives = 250/434 (57.60%), Query Frame = 0


Query: 146 AAKSSENSQAVPLRTL-GPNKPSGVAENNGGVPTEVQNQPPPSSSKSLKAKTTKAERRAL 205
           +A S+   Q  P + L GP+   G A          + + P   SK+      +AERRA 
Sbjct: 62  SAVSAAQCQVGPAKHLAGPDSQLGTA----------KEKVPAGRSKA----ELRAERRAK 121

Query: 206 QEAQRAAKVSAKGETNKSGTAPGKTVKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKD 265
           QEA+RA K + KG+  + G  P              A PS A     G  R  +  +  D
Sbjct: 122 QEAERAMKQARKGD--QGGPPP-------------QACPSTAGETPSGVKRLPEHSQVDD 181

Query: 266 APHPRMQFDDKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTI 325
              P +    +  V+K +++ V  + +  ++V LF HLPQY +   L   +S       I
Sbjct: 182 ---PTLL---RRLVKKPERQQVPTRKDYGSKVSLFSHLPQYSRQNSLTQFMS--IPSSVI 241

Query: 326 HPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFF 385
           HPA+ ++GLQY  G + G NARCIA+L A QQ I+DY+TPP + L RDL  K+  Y SF 
Sbjct: 242 HPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDYTTPPSEELSRDLVNKLKPYFSFL 301

Query: 386 NECRPLSVSMGNSIRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHA 445
            +CRPLS SM N+I+ L   I  +  +  E E K+ L + IDR+I EKI++A + I R A
Sbjct: 302 TQCRPLSASMYNAIKLLNKEITGVSGSKREEEAKSELRAAIDRYIKEKIVLAAQAISRFA 361

Query: 446 ATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKC 505
             KI +GDV+L YG S  V  +L  A   G++FRVVVVDSRP+LE +  LR L+ +G+  
Sbjct: 362 YKKISNGDVILVYGCSSLVSHILQEAWAKGRQFRVVVVDSRPRLEAKHTLRSLVRAGVPA 421

Query: 506 TYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKF 565
           +Y  I A SYV+ EV++V LGA A+L+NG+V SRVGTA +A+VA A +VPVL+CCE YKF
Sbjct: 422 SYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKF 458

Query: 566 HERVQLDSICFNEL 579
            ERVQ D+   NEL
Sbjct: 482 CERVQTDAFVSNEL 458

[Close]

BLAST of CmaCh11G002470 vs. TAIR 10
Match: AT5G38640.1 (NagB/RpiA/CoA transferase-like superfamily protein )

HSP 1 Score: 607.4 bits (1565), Expect = 1.9e-173
Identity = 356/601 (59.23%), Postives = 423/601 (70.38%), Query Frame = 0


Query: 1   MDARRGSR-VVKPKVRQVGFFTLDAPNPPGRSLS----GPVGFGSSQQSLSPPTDPLSPV 60
           M++RR  R VV PKVRQVGFFT   P+   +             SS  ++SP  + LSPV
Sbjct: 1   MESRRNPRAVVDPKVRQVGFFTSSQPDSSTQQQQPDPIAATSASSSSSTISPSGNSLSPV 60

Query: 61  MIPPPR-HLSDNFASRSTILPVPTPANWRNSGDQIHVGSYNPSQTLLATSPSSRIWDDEL 120
           MIPPPR + SD F  R  +                            A SPSS  +    
Sbjct: 61  MIPPPRLNSSDTFPLRVAV----------------------AGAAASAVSPSSFSYSSRR 120

Query: 121 EMSEDSSTSVPYRRS------GSGKIASSLPGLGV-HMAAKSSENSQAVPLRTLG-PNKP 180
           +  + S+T+ P R S       S  +ASSLPG+G+  MAA  S +  A  L T+     P
Sbjct: 121 DFPDGSTTASPGRHSRGSFVKSSVPVASSLPGIGMDSMAAAKSSSVPASGLTTVSVVTMP 180

Query: 181 SGVAENNGGVPTEVQNQPPPSSSKSLKAKTTKAERRALQEAQRAAKVSAKGETNK----- 240
            G++E   G+  EVQ+       K LK KTTKAERRA+QEAQRAAK +AK +  K     
Sbjct: 181 PGLSEKASGM--EVQS----DQKKPLKEKTTKAERRAIQEAQRAAKAAAKADGGKVAPVS 240

Query: 241 SGTAPGKTVKQPSAMKDSTAAPSVA----STDKRGGDRTLDKERKKDAPHPRMQFDDKNR 300
           S +    +VK     K ++    VA    + +K+GG    +K+RKKDAPHPRMQ+DD++R
Sbjct: 241 SASVASTSVKAAKPAKATSQKNDVAVATGAAEKKGGPS--EKDRKKDAPHPRMQYDDESR 300

Query: 301 VEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGLQYMA 360
           V KAK+RAV  QTEA+NRVELFRHLPQYE GTQLPDL +KFFQLD +HPA+YKVGLQY++
Sbjct: 301 VVKAKRRAVVKQTEAKNRVELFRHLPQYEHGTQLPDLETKFFQLDPMHPAVYKVGLQYLS 360

Query: 361 GDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVSMGNS 420
           GDI GGNARCIAML AFQ+ +KDYSTPP+KSL RD+TAKI  YVSF  ECRPLS+SMGN+
Sbjct: 361 GDISGGNARCIAMLQAFQEVVKDYSTPPEKSLNRDMTAKISSYVSFLIECRPLSISMGNA 420

Query: 421 IRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTY 480
           IRF+KNRIAKLP+ L ESE KATL SDI+RFINEKII+AD VIV+HA TKIRDGDVLLTY
Sbjct: 421 IRFVKNRIAKLPITLSESEAKATLQSDIERFINEKIIVADTVIVKHAVTKIRDGDVLLTY 480

Query: 481 GSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTHINAISYVMH 540
           GS  AVEM++L+AHEL K+FRV+VVDSRPKLEGQ LLRRLI  G+ CTYTHINAISY+MH
Sbjct: 481 GSPTAVEMVILHAHELRKKFRVLVVDSRPKLEGQLLLRRLIKRGINCTYTHINAISYIMH 540

Query: 541 EVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSICFNE 579
           EVT+VFLGA++VLSNGTVYSRVGTA VAMVANAF VPVL+CCEAYKFHERVQLDSIC NE
Sbjct: 541 EVTKVFLGASSVLSNGTVYSRVGTACVAMVANAFRVPVLVCCEAYKFHERVQLDSICSNE 571

[Close]

BLAST of CmaCh11G002470 vs. TAIR 10
Match: AT1G48970.1 (NagB/RpiA/CoA transferase-like superfamily protein )

HSP 1 Score: 602.8 bits (1553), Expect = 4.7e-172
Identity = 349/605 (57.69%), Postives = 430/605 (71.07%), Query Frame = 0


Query: 1   MDARRGSRVVKPKVRQVGFFTLDAPNP------PGRSLSGPVGFGSSQQSL--SPPTDPL 60
           MD RRG+  V PKVR+VGFFT   P P      P RS SGPV   +S   L  SP  + +
Sbjct: 1   MDTRRGALAV-PKVRRVGFFTSIEPPPESSLQRPNRSQSGPVDATTSSSPLSDSPSGNLI 60

Query: 61  SPVMIPPPRHLSDNFASR-----STILPVPTPANWRN----SGDQIHVGSYNPSQTLLAT 120
           SPV+IPP RH SDN  SR     +  +PVP PA +R         +HVGSYNP  +LL T
Sbjct: 61  SPVLIPPSRHHSDNLTSRVAAAAAAPVPVPGPAAFRRYLTPERTLLHVGSYNPPDSLLGT 120

Query: 121 SPSSRIWDDELEMSEDSSTSVPYRRSGSGKIASSLPGLGVHM-----AAKSSENSQAVPL 180
           S  S        +SEDS++   ++RS S K+++SLP  G  +     A + SE   A   
Sbjct: 121 SSPS----SNGGLSEDSASLFGFQRSDSTKLSASLPNGGFDLTLAVRAPQESETKIATTS 180

Query: 181 RTLGPNKPSGVAENNGGVPTEVQNQPPPSSSKSLKAKTTKAERRALQEAQRAAKVSAKGE 240
            + G  K + V+  +    T+ Q +  P   K+LK KTTKAERRA+QEAQRAAK +AKGE
Sbjct: 181 ASQGKKKIAEVSGKSESATTKPQKEKEP---KALKDKTTKAERRAIQEAQRAAKAAAKGE 240

Query: 241 ----TNKSGTA-PGKTVKQPSAMKDSTAAPSVASTDKRGGDRTLDKERKKDAPHPRMQFD 300
                ++SG A PGK   +P   K+    P  +S  ++     ++KE++ D P  +MQ+D
Sbjct: 241 GSRRADESGRANPGKAAIKPQPKKE--RLPVTSSVSEKTA-VAVEKEKRMDVPQTQMQYD 300

Query: 301 DKNRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDTIHPAIYKVGL 360
           DK+RV+KAK+RAV  QTE++N+VELF HLPQYE+  QLP+L S FF LD+IH A+YKVGL
Sbjct: 301 DKSRVDKAKRRAVVEQTESKNKVELFLHLPQYERSNQLPNLSSNFFTLDSIHHAVYKVGL 360

Query: 361 QYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECRPLSVS 420
           Q++AGDI G NARCIAML AFQ+AI+DYSTPP K L  DLTAKI GYVSF  ECRPLS+S
Sbjct: 361 QHLAGDISGDNARCIAMLQAFQEAIEDYSTPPMKDLTMDLTAKINGYVSFLIECRPLSMS 420

Query: 421 MGNSIRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDV 480
           MGN+IRFLKN+I KLPVNL ESE K++LCSDI RFI+EK IIAD+ IV+HA TKIRDG+V
Sbjct: 421 MGNAIRFLKNQIRKLPVNLSESEAKSSLCSDIGRFIDEKTIIADKAIVQHAVTKIRDGEV 480

Query: 481 LLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTHINAIS 540
           LLTYG SC VEM+LLYAHE+GK+FRVV+VDSRP LEGQ LLRRL+  GL CTYTHINAIS
Sbjct: 481 LLTYGFSCVVEMILLYAHEIGKKFRVVIVDSRPNLEGQKLLRRLVTRGLDCTYTHINAIS 540

Query: 541 YVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERVQLDSI 579
           Y+M E TRVFLGA+++ SNGT+Y+RVGT+ +AMVANAF VPV++CCEAYKFHERV LDSI
Sbjct: 541 YIMREATRVFLGASSIYSNGTLYARVGTSCIAMVANAFSVPVIVCCEAYKFHERVLLDSI 594

[Close]

BLAST of CmaCh11G002470 vs. TAIR 10
Match: AT2G44070.1 (NagB/RpiA/CoA transferase-like superfamily protein )

HSP 1 Score: 465.3 bits (1196), Expect = 1.2e-130
Identity = 227/303 (74.92%), Postives = 265/303 (87.46%), Query Frame = 0


Query: 585 YQVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTAKIGGYVSFFNECR 644
           Y+VGL Y++ DI GGNARCIAML AFQ+ +KDYSTPP+ +L RD+TA+I  YVSF  ECR
Sbjct: 6   YKVGLHYLSWDISGGNARCIAMLQAFQEVVKDYSTPPENTLNRDMTAQISSYVSFLIECR 65

Query: 645 PLSVSMGNSIRFLKNRIAKLPVNLLESEVKATLCSDIDRFINEKIIIADEVIVRHAATKI 704
           PLS+SMGN+IRF+KNRIAKLP+ L ESE KA+L SDI+RFINEKII AD VIV HA TKI
Sbjct: 66  PLSISMGNAIRFVKNRIAKLPITLSESEAKASLHSDIERFINEKIIGADTVIVEHAVTKI 125

Query: 705 RDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYTH 764
           RDGDVLLTYGSS  +EM+L++AHELGK+FRV VVDSRPKL+G+ LLRRLI  G+ CTYTH
Sbjct: 126 RDGDVLLTYGSSTVIEMILVHAHELGKKFRVFVVDSRPKLQGKLLLRRLIKRGINCTYTH 185

Query: 765 INAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHERV 824
           I AISY+MH+VT+VFLGA++V SNGTVYSRVGTA VAMVANAF VPVL+CCEAYKFHE+V
Sbjct: 186 ITAISYIMHQVTKVFLGASSVFSNGTVYSRVGTACVAMVANAFRVPVLVCCEAYKFHEKV 245

Query: 825 QLD-SICFNELGDPDAISKVPGRKDVNYLDNLTAKEQLQCLNLMYDATPSDYVSMIVTDY 884
           QLD SIC NELGDP+AISKV GR+D+NYL+ LT   +L+ LNLMYDATPSDY+SMI+TDY
Sbjct: 246 QLDYSICSNELGDPNAISKVHGREDINYLNGLTNNAKLKFLNLMYDATPSDYISMIITDY 305

Query: 885 GMV 887
           GMV
Sbjct: 306 GMV 308

[Close]

BLAST of CmaCh11G002470 vs. TAIR 10
Match: AT1G72340.1 (NagB/RpiA/CoA transferase-like superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 7.1e-11
Identity = 44/136 (32.35%), Postives = 69/136 (50.74%), Query Frame = 0


Query: 436 ADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLR 495
           A  +I   +   I DG  +L +G S  V  +L  A +  K FRV+  + RP   G  L  
Sbjct: 187 ARRIIAMLSQDFIFDGCTILVHGLSRVVLEILKTAAQNNKLFRVLCTEGRPDGTGVLLSS 246

Query: 496 RLIASGLKCTYTHINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPV 555
            L    +       +A++Y M EV  VF+GA  V+ +G + + +GT  +A+VA++ + PV
Sbjct: 247 ELSKLDIPVKLLLDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPV 306

Query: 556 LICCEAYKFHERVQLD 572
            +  E+YKF     LD
Sbjct: 307 YVAAESYKFARLYPLD 322

[Close]

BLAST of CmaCh11G002470 vs. TAIR 10
Match: AT1G53880.1 (Eukaryotic translation initiation factor 2B (eIF-2B) family protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-10
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 448 IRDGDVLLTYGSSCAVEMLLLYAHELGKEFRVVVVDSRPKLEGQALLRRLIASGLKCTYT 507
           I DG  +L +G S  V  +L  + +  K FRV+  + RP   G  L   L    +     
Sbjct: 397 IFDGCTILVHGFSRVVFEILKTSAQNKKLFRVLCTEGRPDKTGVLLANELAKLDIPVKLL 456

Query: 508 HINAISYVMHEVTRVFLGAAAVLSNGTVYSRVGTAGVAMVANAFHVPVLICCEAYKFHER 567
             +A++Y M EV  VF+GA  V+ +G + + +GT  +A+VA + + PV +  E+YKF   
Sbjct: 457 IDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQIALVAQSMNKPVYVAAESYKFARL 516

Query: 568 VQLD 572
             LD
Sbjct: 517 YPLD 520

The following BLAST results are available for this feature:

BLAST of CmaCh11G002470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q61749	3.6e-76	44.88	Translation initiation factor eIF-2B subunit delta OS=Mus musculus OX=10090 GN=E...	[more]
P41111	6.1e-76	43.31	Translation initiation factor eIF-2B subunit delta OS=Oryctolagus cuniculus OX=9...	[more]
Q9UI10	5.7e-74	43.30	Translation initiation factor eIF-2B subunit delta OS=Homo sapiens OX=9606 GN=EI...	[more]
Q63186	2.2e-73	38.80	Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116...	[more]
Q3T058	2.4e-72	41.94	Translation initiation factor eIF-2B subunit delta OS=Bos taurus OX=9913 GN=EIF2...	[more]

BLAST of CmaCh11G002470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38640.1	1.9e-173	59.23	NagB/RpiA/CoA transferase-like superfamily protein	[more]
AT1G48970.1	4.7e-172	57.69	NagB/RpiA/CoA transferase-like superfamily protein	[more]
AT2G44070.1	1.2e-130	74.92	NagB/RpiA/CoA transferase-like superfamily protein	[more]
AT1G72340.1	7.1e-11	32.35	NagB/RpiA/CoA transferase-like superfamily protein	[more]
AT1G53880.1	1.6e-10	33.06	Eukaryotic translation initiation factor 2B (eIF-2B) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000649	Initiation factor 2B-related	PFAM	PF01008	IF-2B	coord: 341..579 e-value: 3.1E-65 score: 220.2 coord: 597..886 e-value: 1.3E-76 score: 257.5
IPR042529	Initiation factor 2B-like, C-terminal	GENE3D	3.40.50.10470		coord: 435..581 e-value: 1.0E-47 score: 164.0 coord: 691..890 e-value: 4.8E-62 score: 210.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..279
None	No IPR available	PANTHER	PTHR10233	TRANSLATION INITIATION FACTOR EIF-2B	coord: 1..578
None	No IPR available	PANTHER	PTHR10233	TRANSLATION INITIATION FACTOR EIF-2B	coord: 585..886
None	No IPR available	PANTHER	PTHR10233:SF15	NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN	coord: 585..886
None	No IPR available	PANTHER	PTHR10233:SF15	NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN	coord: 1..578
IPR037171	NagB/RpiA transferase-like	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 596..888
IPR037171	NagB/RpiA transferase-like	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 295..578

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G002470.1	CmaCh11G002470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
biological_process	GO:0044237	cellular metabolic process
molecular_function	GO:0003743	translation initiation factor activity