CmaCh11G002460 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G002460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	oleosin 1-like
Location	Cma_Chr11: 1250808 .. 1251453 (-)
RNA-Seq Expression	CmaCh11G002460
Synteny	CmaCh11G002460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATGAAAGGTAAAGAAAGGGTCAGCCATGGGCACCCATAAGTAGCTCCAATCCCACCACGTGTATCCCCTTCATGTCTTCTCCTTCTCCCATCTGTCTCTATATACACGCACCCTTCCCTCAAAATCCTCGTCGTCATTTCTCTTTTACCCGTTCACTCCCACCACCACCACCGCCACCTCCTTCTCACCCATGGCCGATCGTCCCTCAACCGCCACCGCCCTCATCCGCCGCCTCCAAGAACATGCACCCAACTCCCCGCAGCTCCTCGGCCTTCTCACCCTCTTCATCTCCGCCTCCATTCTCATCTTCCTCATCGGCCTTACATTCACTGCCGCCCTCATCACCCTCATCTTCCTTAGCCCTGTCATCCTTTTAACAAGCCCCATCTGGGCTCCCCTCGTCTTCTTCCTCTTCATCCCCGCCGTCGGGTTGCTGTGTCTGGGTGGCTTTGCGGTGGCTGCTGCAGCCGGGGTCTCGTGGGCGTACCGGTACTTCAAAGGGATGCACCCACCGGGGTCGGAGCAGGTGGAGTATGCGAGGAGCCGCATTTACGACACGGCCAGCCAAGTGAAGGATTATGCGAGGGAGTATGGAGGGTATTTGCAGAGTAAGGTGAAAGACGCTGCTCCTGGAGCTTGA

mRNA sequence

ATGGGTATGAAAGGTAAAGAAAGGCTCCAATCCCACCACGTGTATCCCCTTCATGTCTTCTCCTTCTCCCATCTGTCTCTATATACACGCACCCTTCCCTCAAAATCCTCGTCGTCATTTCTCTTTTACCCGTTCACTCCCACCACCACCACCGCCACCTCCTTCTCACCCATGGCCGATCGTCCCTCAACCGCCACCGCCCTCATCCGCCGCCTCCAAGAACATGCACCCAACTCCCCGCAGCTCCTCGGCCTTCTCACCCTCTTCATCTCCGCCTCCATTCTCATCTTCCTCATCGGCCTTACATTCACTGCCGCCCTCATCACCCTCATCTTCCTTAGCCCTGTCATCCTTTTAACAAGCCCCATCTGGGCTCCCCTCGTCTTCTTCCTCTTCATCCCCGCCGTCGGGTTGCTGTGTCTGGGTGGCTTTGCGGTGGCTGCTGCAGCCGGGGTCTCGTGGGCGTACCGGTACTTCAAAGGGATGCACCCACCGGGGTCGGAGCAGGTGGAGTATGCGAGGAGCCGCATTTACGACACGGCCAGCCAAGTGAAGGATTATGCGAGGGAGTATGGAGGGTATTTGCAGAGTAAGGTGAAAGACGCTGCTCCTGGAGCTTGA

Coding sequence (CDS)

ATGGGTATGAAAGGTAAAGAAAGGCTCCAATCCCACCACGTGTATCCCCTTCATGTCTTCTCCTTCTCCCATCTGTCTCTATATACACGCACCCTTCCCTCAAAATCCTCGTCGTCATTTCTCTTTTACCCGTTCACTCCCACCACCACCACCGCCACCTCCTTCTCACCCATGGCCGATCGTCCCTCAACCGCCACCGCCCTCATCCGCCGCCTCCAAGAACATGCACCCAACTCCCCGCAGCTCCTCGGCCTTCTCACCCTCTTCATCTCCGCCTCCATTCTCATCTTCCTCATCGGCCTTACATTCACTGCCGCCCTCATCACCCTCATCTTCCTTAGCCCTGTCATCCTTTTAACAAGCCCCATCTGGGCTCCCCTCGTCTTCTTCCTCTTCATCCCCGCCGTCGGGTTGCTGTGTCTGGGTGGCTTTGCGGTGGCTGCTGCAGCCGGGGTCTCGTGGGCGTACCGGTACTTCAAAGGGATGCACCCACCGGGGTCGGAGCAGGTGGAGTATGCGAGGAGCCGCATTTACGACACGGCCAGCCAAGTGAAGGATTATGCGAGGGAGTATGGAGGGTATTTGCAGAGTAAGGTGAAAGACGCTGCTCCTGGAGCTTGA

Protein sequence

MGMKGKERLQSHHVYPLHVFSFSHLSLYTRTLPSKSSSSFLFYPFTPTTTTATSFSPMADRPSTATALIRRLQEHAPNSPQLLGLLTLFISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPLVFFLFIPAVGLLCLGGFAVAAAAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDYAREYGGYLQSKVKDAAPGA

Homology

[Close]

BLAST of CmaCh11G002460 vs. ExPASy Swiss-Prot
Match: A6MGW7 (Oleosin OS=Lilium longiflorum OX=4690 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.5e-39
Identity = 92/160 (57.50%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 47  PTTTTATSFSPMADRPSTATALIRRLQEHAPNSPQLLGLLTLFISASILIFLIGLTFTAA 106
           P T T    +P +      + L+RR+Q+H PNS QL+G LTL IS  IL+ L GLT T+A
Sbjct: 12  PVTRTHRHHAPASG--GACSNLLRRIQDHVPNSTQLVGFLTLLISGGILLLLTGLTATSA 71

Query: 107 LITLIFLSPVILLTSPIWAPLVFFLFIPAVGLLCLGGFAVAAAAGVSWAYRYFKGMHPPG 166
            +  +  +P+ILLTSP+W PLV   F+   G L   GF VAA AG +W YRY  G HP G
Sbjct: 72  AMGFVLFAPLILLTSPVWIPLVTIFFLLTAGFLSTCGFGVAALAGGTWLYRYLSGRHPLG 131

Query: 167 SEQVEYARSRIYDTASQVKDYAREYGGYLQSKVKDAAPGA 207
           SE+V+YARSRI DTAS VKDYAREYGGYLQS+VKDAAPGA
Sbjct: 132 SERVDYARSRIADTASHVKDYAREYGGYLQSRVKDAAPGA 169

[Close]

BLAST of CmaCh11G002460 vs. ExPASy Swiss-Prot
Match: A0A060L102 (Oleosin G OS=Pinus massoniana OX=88730 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.0e-37
Identity = 75/138 (54.35%), Postives = 103/138 (74.64%), Query Frame = 0


Query: 69  IRRLQEHAPNSPQLLGLLTLFISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPLV 128
           ++++ +H PN  Q+LG +TLF+S ++L+FL GLT T  ++ L+ L+PV++  SPI  PL 
Sbjct: 1   MQKIHDHTPNPTQILGFITLFVSGAVLLFLTGLTLTGTVVGLVVLTPVLIFFSPILIPLA 60

Query: 129 FFLFIPAVGLLCLGGFAVAAAAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDYA 188
             LF+   G L  GGF +AA + +SW Y Y KG HPPG++Q++YAR RI DTA+ VKDYA
Sbjct: 61  TVLFVAVAGFLSAGGFGLAALSAISWLYNYIKGRHPPGADQIDYARMRIADTATHVKDYA 120

Query: 189 REYGGYLQSKVKDAAPGA 207
           REYGGYLQSK++DAAPGA
Sbjct: 121 REYGGYLQSKIQDAAPGA 138

[Close]

BLAST of CmaCh11G002460 vs. ExPASy Swiss-Prot
Match: A0A1I9R3Y6 (Oleosin OS=Pinus elliottii OX=42064 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36
Identity = 76/139 (54.68%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 68  LIRRLQEHAPNSPQLLGLLTLFISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPL 127
           +++++ +H PN  Q+LG +TLF+S +IL+ L GLT T  +I L+ L+PV++  SPI  P+
Sbjct: 8   VMQKIHDHTPNPTQILGFITLFVSGAILLLLTGLTLTGTVIGLVVLTPVLIFFSPILIPV 67

Query: 128 VFFLFIPAVGLLCLGGFAVAAAAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDY 187
              LF+   G L  GGF +AA + +SW Y Y KG HPPG++Q++YAR RI DTAS VKDY
Sbjct: 68  ATVLFVAVAGFLSAGGFGLAALSAISWLYNYIKGRHPPGADQIDYARMRIADTASHVKDY 127

Query: 188 AREYGGYLQSKVKDAAPGA 207
           AREYGGYLQSK++DAAPGA
Sbjct: 128 AREYGGYLQSKIQDAAPGA 146

[Close]

BLAST of CmaCh11G002460 vs. ExPASy Swiss-Prot
Match: Q45W86 (Oleosin Ara h 11.0102 OS=Arachis hypogaea OX=3818 GN=Ahy_A10g047467 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 42/120 (35.00%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 71  RLQEHAPNSPQLLGLLTLFISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPLVFF 130
           R ++  P S QL+   T  ++   L+ L GL   A +I L  ++P+ ++ SP+  P V  
Sbjct: 10  RQRQDQPRSTQLVKATTAVVAGGSLLILAGLVLAATVIGLTTITPLFVIFSPVLVPAVIT 69

Query: 131 LFIPAVGLLCLGGFAVAAAAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDYARE 190
           + +  +G L  GGF VAA   ++W YRY  G HPPG+ Q++ AR ++   A ++KDY ++
Sbjct: 70  VALLGLGFLASGGFGVAAITVLTWIYRYVTGKHPPGANQLDTARHKLMSKAREIKDYGQQ 129

[Close]

BLAST of CmaCh11G002460 vs. ExPASy Swiss-Prot
Match: Q9XHP2 (Oleosin L OS=Sesamum indicum OX=4182 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.1e-12
Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 77  PNSPQLLGLLTLFISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPLVFFLFIPAV 136
           P + +++   T   +   L+ L GLT    +I L   +P++++ SP+  P V  +F+   
Sbjct: 20  PRAQRVVKAATAVTAGGSLLVLSGLTLAGTVIALTIATPLLVIFSPVLVPAVITIFLLGA 79

Query: 137 GLLCLGGFAVAAAAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDYAREY 192
           G L  GGF VAA + +SW YRY  G HPPG++Q+E A++++   A ++KD A ++
Sbjct: 80  GFLASGGFGVAALSVLSWIYRYLTGKHPPGADQLESAKTKLASKAREMKDRAEQF 134

[Close]

BLAST of CmaCh11G002460 vs. TAIR 10
Match: AT3G18570.1 (Oleosin family protein )

HSP 1 Score: 149.1 bits (375), Expect = 4.0e-36
Identity = 87/172 (50.58%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 36  SSSSFLFYP-FTPTTTTATSFSPMADRPSTATALIRRLQEHAPNSPQLLGLLTLFISASI 95
           SS    ++P +  T TT  S SP+       ++   +L+ H+P S QL G L LFIS  I
Sbjct: 6   SSGEAQYWPNYGSTATTTVSNSPI-------SSFFHQLRSHSPTSSQLFGFLALFISTGI 65

Query: 96  LIFLIGLTFTAALITLIFLSPVILLTSPIWAPLVFFLFIPAVGLLCLGGFAVAAAAGVSW 155
           L+FL+G++ TAA++  I   P+I+++SPIW P    +F+   G L + GF V   A VSW
Sbjct: 66  LLFLLGVSVTAAVLGFIVFLPLIIISSPIWIP----VFVVVGGFLTVSGFLVGTVALVSW 125

Query: 156 AYRYFKGMHPPGSEQVEYARSRIYDTASQVKDYAREYGGYLQSKVKDAAPGA 207
            YRYF+GMHP GS Q++YARSRIYDTAS VKDYAREYGGY   + KDAAPGA
Sbjct: 126 TYRYFRGMHPVGSNQMDYARSRIYDTASHVKDYAREYGGYFHGRAKDAAPGA 166

[Close]

BLAST of CmaCh11G002460 vs. TAIR 10
Match: AT1G48990.1 (Oleosin family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27
Identity = 83/178 (46.63%), Postives = 106/178 (59.55%), Query Frame = 0


Query: 30  RTLPSKSSSSFLFYPFTPTTTTATSFSPMADRPSTATALIRRLQEHAPN-SPQLLGLLTL 89
           RT PS  +     Y     +TT    +   + P  ++ L + LQ  +PN S QL G L  
Sbjct: 4   RTNPSSHTQQRPIY----NSTTVPRSNTTTNHP-LSSLLRQLLQSQSPNHSGQLFGFLAF 63

Query: 90  FISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPLVFFLFIPAVGLLCLGGFAVAA 149
           FIS  IL+ L G+T TA ++  I   P+I+++SPIW P    LF+   G L L G  +A 
Sbjct: 64  FISGGILLLLTGITVTAFVLGFIAFLPLIIISSPIWIP----LFLIVTGFLSLAGLILAT 123

Query: 150 AAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDYAREYGGYLQSKVKDAAPGA 207
            A VSW YRYFKGMHP  S+QV+YARSRI+DTA+ VKDYA   GGY    +KDAAPGA
Sbjct: 124 GAVVSWLYRYFKGMHPLRSDQVDYARSRIHDTAAHVKDYA---GGYFHGTLKDAAPGA 169

[Close]

BLAST of CmaCh11G002460 vs. TAIR 10
Match: AT2G25890.1 (Oleosin family protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.8e-13
Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 68  LIRRLQEHAPNSPQLLGLLTLFISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPL 127
           ++R L E +P++ Q++  +T       L+ L GLT T  +I LI  +P+++L SP+  P 
Sbjct: 14  IMRSLHESSPSTRQIVRFVTAATIGLSLLVLSGLTLTGTVIGLIVATPLMVLFSPVLVPA 73

Query: 128 VFFLFIPAVGLLCLGGFAVAAAAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDY 187
           V  + +  +G L  GG  VAAA  ++W Y+Y  G HP G+++V+YAR RI + A ++  Y
Sbjct: 74  VITIGLLTMGFLFSGGCGVAAATALTWIYKYVTGKHPMGADKVDYARMRIAEKAKELGHY 133

[Close]

BLAST of CmaCh11G002460 vs. TAIR 10
Match: AT4G25140.1 (oleosin 1 )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 79  SPQLLGLLTLFISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPLVFFLFIPAVGL 138
           S Q+    T   +   L+ L  LT    +I L   +P++++ SPI  P +  + +   G 
Sbjct: 40  SRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGF 99

Query: 139 LCLGGFAVAAAAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDYAREYG 193
           L  GGF +AA    SW Y+Y  G HP GS++++ AR ++   A  +KD A+ YG
Sbjct: 100 LSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYYG 153

[Close]

BLAST of CmaCh11G002460 vs. TAIR 10
Match: AT5G40420.1 (oleosin 2 )

HSP 1 Score: 56.2 bits (134), Expect = 3.5e-08
Identity = 39/130 (30.00%), Postives = 62/130 (47.69%), Query Frame = 0


Query: 72  LQEHAPNSPQLLGLLTLFISASILIFLIGLTFTAALITLIFLSPVILLTSPIWAPLVFFL 131
           + E  P+S Q+L LL        L+ L GL    ++I L+   P+ LL SP+  P    +
Sbjct: 44  MPESGPSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTI 103

Query: 132 FIPAVGLLCLGGFAVAAAAGVSWAYRYFKGMHPPGSEQVEYARSRIYDTASQVKDYAREY 191
            +   G L  G F +   + +SW   Y +G      EQ+EYA+ R+ D         +E 
Sbjct: 104 GLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMADAVGYAGQKGKEM 163

Query: 192 GGYLQSKVKD 202
           G ++Q+K +D
Sbjct: 164 GQHVQNKAQD 173

The following BLAST results are available for this feature:

BLAST of CmaCh11G002460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A6MGW7	6.5e-39	57.50	Oleosin OS=Lilium longiflorum OX=4690 PE=1 SV=1	[more]
A0A060L102	6.0e-37	54.35	Oleosin G OS=Pinus massoniana OX=88730 PE=1 SV=1	[more]
A0A1I9R3Y6	1.3e-36	54.68	Oleosin OS=Pinus elliottii OX=42064 PE=1 SV=1	[more]
Q45W86	1.0e-12	35.00	Oleosin Ara h 11.0102 OS=Arachis hypogaea OX=3818 GN=Ahy_A10g047467 PE=1 SV=1	[more]
Q9XHP2	5.1e-12	34.78	Oleosin L OS=Sesamum indicum OX=4182 PE=1 SV=1	[more]

BLAST of CmaCh11G002460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18570.1	4.0e-36	50.58	Oleosin family protein	[more]
AT1G48990.1	2.0e-27	46.63	Oleosin family protein	[more]
AT2G25890.1	2.8e-13	36.67	Oleosin family protein	[more]
AT4G25140.1	1.2e-08	33.33	oleosin 1	[more]
AT5G40420.1	3.5e-08	30.00	oleosin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000136	Oleosin	PFAM	PF01277	Oleosin	coord: 81..192 e-value: 5.7E-36 score: 122.7
IPR000136	Oleosin	PANTHER	PTHR33203	OLEOSIN	coord: 63..206
None	No IPR available	PANTHER	PTHR33203:SF4	F27J15.22	coord: 63..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G002460.1	CmaCh11G002460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019915	lipid storage
biological_process	GO:0022414	reproductive process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0012511	monolayer-surrounded lipid storage body