CmaCh11G002440 (gene) Cucurbita maxima (Rimu) v1.1

BLAST of CmaCh11G002440 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-22
Identity = 68/156 (43.59%), Postives = 84/156 (53.85%), Query Frame = 0

Query: 19  NSLPTGLLRSVKVLV---VLCAKKAAHITKKLKWKP--------------------SPGA 78
           NS P+    SV  LV   VLCA+ A  ++KKLK K                     S   
Sbjct: 9   NSSPSHKRLSVSFLVSMMVLCARHANRLSKKLKLKSKKRTCSGGEGGGERFRWNMISSSM 68

Query: 79  TLARPKDMLKTISLSAMTLFRKKKTSRRGVRPEEEDDEEEKEWGRVGVWQRGILMGDKCQ 138
           +  RPK++  T+S  AMT+ R+K        PEE+    E+E    G+WQR ILMG KC+
Sbjct: 69  SSPRPKELFTTLSNKAMTMVRRKNP------PEEKATAMEEEH---GLWQREILMGGKCE 128

Query: 139 PLDFPGVIYYDSNGNKVNEAPFRSPRASPLPGYLLR 152
           PLDF GVIYYDSNG  +NE P RSPR +PLP Y  R
Sbjct: 129 PLDFSGVIYYDSNGRLLNEVPPRSPRGTPLPSYPTR 155

BLAST of CmaCh11G002440 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17
Identity = 59/158 (37.34%), Postives = 80/158 (50.63%), Query Frame = 0

Query: 32  LVVLCAKKAAHITKKLKWKP--------------------------------SPGATLA- 91
           L+VLCA+ A+ ++KKLK K                                 SP  T + 
Sbjct: 24  LMVLCARHASRVSKKLKPKKTRKQTHLEDYLESPKSNGNGSEDGRGGGRFGWSPARTFSP 83

Query: 92  ---RPKDMLKTISLSAMTLFRKKK-------TSRRGVRPEEEDDEEEKEWGRVGVWQRGI 147
              RPK++  T+S  AMT+  +K        T +  V    E+DEEE      GVWQR I
Sbjct: 84  MRVRPKELYTTLSNKAMTMVGRKNKAYDGGPTKKTAVEMVMEEDEEE-----YGVWQREI 143

BLAST of CmaCh11G002440 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 6.1e-05
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 0

Query: 103 VWQRGILMGDKCQPLDFPGVIYYDSNGNKVNEA 136
           +WQ+ ILMG KCQ  DF GVI YD++G  V  A
Sbjct: 88  LWQKNILMGGKCQLPDFSGVILYDADGQVVPPA 120