CmaCh11G002330 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G002330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor BIM1
Location	Cma_Chr11: 1175536 .. 1183582 (-)
RNA-Seq Expression	CmaCh11G002330
Synteny	CmaCh11G002330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATGTTACGGGGGTAACACTCTGTTCTGTTACCAATCCATAAGTATTCGATATTAAATTAATTAATGTTAATTTTTTATTATATTAATTAATTTCGCGCCACGTCATCAAGTCCCGCCATTTCCTCGCCCGCTCTTGCTGGTTCCCGATACAACTTTCCCCGCTCTTATCGTATGAATTTGCTTTAACAATAATTTTAATTTTTTCTAATATTTAAATATTTTAATTTTAAAAAAAAAAAATCCTTTTCTCTGAGATTTTAGTATAACTATAAACTATGTTATTGTGGGCTATAATTATTCACCATTATATTAATTTCACCATAAAGTTGTATTTAAATTATACTAATTAATAATTATAAAGAGAAAAAAGGAGCATATGGTATTATTATTTATAAAGAAGGTCCGCGCATGAACCTAGGCAGAGTGAGTAGATGTTTCTTTGTACGAGAATCTTTTATTATTTGGAATCAAATGTACATGTAGCTCCGTAGCAGCCTATGACCCTAGCCTCGGGACTCTCAATTTTTTTTTTTTCTTTCTTTTGCATTAATTTAAAGGTATTCATTATTTATTCTATAATAAAATTCTATATAGTCCGAAAGTTTAGATTATAGTTTTAGAAACTACAATAAATCCATAAATTGATCACTACCCAAATAAAAAAAGAAAAGAAAATTGAGGTAAGTGACGGTTTCTTATTTAAGAGGATTTTAGTCACCCGACACAATATGTTTATTTTCAATGATGAAATTCATTATGTTTAGTGTCGAGTTTTTGCCACTTCATTGTCTGTCTATGTGTTGAAAAGATACCTGATAGAGTTGGACTTCAATAGGTATTCAAGATGATCAACTAAAGACTTAATTTCATTGTAGTGATGATCGAGATTCACGAACAACTTCATTTTCCACTTAGATTTGAGTTAAAATGGTATAATTAAAAAAAAAATATATATAATGTTTAAAATTTTAAATTCTGTTTTTTTGATTGGCCAGTAGCTATTTCTTATTTGGTAGGAGTTGATTATGAGAAGGTTATATTAAAGTATTTATTGTGTGGGTGAGAGGACAAGAGCTGAGAGTTGCAGTGGCTTGGTCGGCTGTGCTAATCCGCAGTTTCCCTTTTACGAACGTCGTCGTCTTCTGCCCTTCTTTATGCACGTGAGCTGCAGGTCAACCGAAACTACTCCTGCCCCACCTTACGTTTTTTTTTTTTCCTTAAAACAAAATTAATAAAAATATCTTTAAATTTTATTTTAAAATATTCATAAATTTTTTAAAAAATATATAAAAATTACTTTAAACTTAAAAAAACACTTTACCATTATTATTTTTTTACCAAAAATCATTTTTAATTTAAAAAATATCTTTATTTTTTTTGTTAACTTCATAAACCCCTTAAAAAAAAAAATTAATTTTTTACCAGTATTTTTTTTTACTTTTTTAGAGAAGTGGGTGGAAGGATATTAATAAAAAAAATTAGAATTTAAAAATATTTTTTAAATAATATTAAAAGTTCAATGATATTTTAAACTGTATTATTTAAACTTTTTAAAATTTAGAGATATATTTTAGATAAAATATAAAATTTAGGAGTGTTTCGATTAATTTAGCATTATTATATATATACTTAAAATGCCAAGGTTAATTCCTATTAAAATTAATTAAAAAGTATTTATTGGGCAAGGTTAAAATTCTCTACCTTTACCCCGACAAATATCTTAAAAAATGGTTAGATTAACTATAATTTGATCCATGTGGGTTAAATTATGGACCCATCACTTTTCACGAATATTATTATCATTATACATTTTTATTTTTAAATTAATCAAAAGGAGGCGAGGGCCTAGCTGTTGCTCCAAGATTCGTTGCGTGATTAAAATTTAAATTAATCAAACATGTAATAAGAAATGCTACTATATTGATAGGAAAGGGATATGAACCACATATTAATTTAAAAAATATATACATATGTTGCTATATACATTGTCACGCCAAGCTGTATCATGTTGCTTTATGTGTACAAACTTTGTCAATCATTATCCAACTGAATTAAATTACATTAATGAGCTTTATTTATAAGACAATTTAAATTAACCCTAATTTACGATATGTACTATGTTTTTAAAATTAAATATCGATGAATATAACGAGGGACACGTGGCAGTCAAACCTTATAATTAACCAACGTGGTTTTGTAGTTAATTAATTAATTGTTTATTTTATTAAGTTAATAATTGGGATTTGTGCCCGCACTTATGAGAAAGATTTATAATATTAAATATTGAGAAAATACATATAAATAAGAAAATTCAATAATCATATTTCTTTTTAAATTTGTAGTTTTAAAATTTACAATCGCGATTAAGTAAAACTTTTTTTTTTTTTTTTTTAAGTTTAATTAAAAAAAGATTAAAACGTGAAGTTTATCAGCCTCCGTGGATTATAATTGCACCACACAGAGAAGAAAACGGGACGGAAAATTCGTGGAGGCTAGCGTAAACGCCGTCCGCCCCGCCGTAACGTCGTCAGCCAAACGGCGTCGTAACAAACGGAAAACAGCTACCTGCGCAATTTGGAAAGAGGGACAATCGCCGAGTGTATAAAAAGATCGGACTGACACTATAGGGAGAACAGAGAGAGAGAGGTTCTTCCGACCTCAAGCCTCGTCTTCCGCAGCACTGTTTGCTCGCCTACAAACATTGAATTTCACAAAAAATACTTTAGATCGAAATCAATTCTCTTGCCATTTTTCTATCTTCGTAGTTTTCAAGCTTCTGATTAAATCTGGCTGTTAATGAAGATAAAGTTGCTGAATCAAACTCCATTATCGTTTTGCTGAAGCTCGCCGGCGCCGGGACTGCATTCGAACTGGTAAGATTATCTGAATTTCAATTTGGTTTCTATACGATTTTCGCGTTTACTGTTCATAGTGGAATGACTTTTGATGTGTATACTGGATGCTAGATCTTCTGAATTTGGCTGTGACTACTCACCGTTGGCCGTGGTGGAAGTCTTTCTAGAAGAAGAATTTCCTCTGAAATTTGACGATCGGAAGTGATTTTATCGAGAAACAATCAGAATCCAGGAATCGCGCCAAATCCTTACCTAATGCGAGTATTGGAAAACCTAGCTTTGTCGTAAAGAGACTGGGAACGCTTCGTCTTGGAGATCTTTACCAGCCGGAGACTTGCTCCAGAAATTTGCTATTTGGCTGCTTTCCATGCCTGGTGTGGATCTAAGAATTAATTCCGGAATTTTCCTGCTCTTTCTTGCTCCAGAATCCAGCAATCGAGCTCTGAATTTCCTAGAGCACTACCATTTCCGAAGCGACATAAATCAAAATTCCGCGAGAATTCATCTTCCGGCTGTGGACTGTCAAATCCAAAATTGGCGAAAAATCCGATGGAACTTCCTCAACCCCGTCCGTTTGGAGCCGAAGGTACTTCCTCTTCCTCACAAATTAAAATTAAACTCGGAATAAGTTTCCATTTCAATTGTCCCCGCACTAATCAGCTTGAATCTGTTGCTATTTGTTTTCCACGAGAAAATCGATTCAACTTTTTGAAGTTTCAGCAATTCGATAACCATATGGAACTAAATAAGGATAAGAATTTAGAATCTCCAAAACAAATTGAGTTAACGGAGTCTATCTTGAACGTGCATGAACAGGAAGCAAATCAACACATGACTTCCTCTCACTGTACACCCATTCAAGTCCACAGCTAGATCCAAGACCATCCTCACAAGGTATTCATTAATTTCATTTAATTTTGATTCTAATTTTTTCTTTCCTCATGAACTTAATTACGAATCCAGATATTATATCTGTGTAATATATTATTTGTTAAATCTATGTTTGGGGGCTTATATTTAAGAGGGGGAGGGGAAAATCGATAAACGTATATGCACGTGACAAGCATTGAATCATGGATCTGGGGCCAAGAAACATTCAAAAGCGTAGTCTGGGGCGGGGCTGGCTGTGCTAACCGCATAGGCTGCTGAAATCTAAAAAGAAAAAGCGTAGCTTCAGCAGTTAGCAGCTAGTGCCCAATTTCATATTGGGGTGGGGCGCCGGGGGTCCCCTCTGCCCCTTCCCCACATCGCCCTGATTTGACGTCGCACATGACCCCAACTTTTCCTTTTTCCATTTCTTCACATTACAGCTAAATCTGGGATTTCGCCCCCTTCTTTCACCTTTTAAATGCCCATCATCAAATTATCATCTCAGATTGAGAAATCATTGGAGAACTCGGAAGAATGTGGTCGATAATTCTATACAATTGGATATTTGATCGAGAATTTTGAAATAGACAATATTTGCTTATATACCAGTTAGATCTTTTAATGTCTTTCCAATCTGGTATATCAAAATACTTCTAATGCAGTGTCTTAGAATTCTGTTCTTACTCAAATTAAAGGATATGATGGGTATCAAGAAATTTCTTATCTGGGAAACTTTCTTCACTGTACTATCACATATTTGAGTGTTCAGTATCATGCAAAGCATCTGCTACTTCATTTAATAAAAAAATGAATCCGACTGAAATTTACTGCAAGTAGAAATTTACTGCAAGTAGAAATTTATGCTAATCAGCGTGTAATTAAGGATTTTTTGTTACAGCGCGGCAGTGAATACTTCTTTTGGTTTTGGTTTTAATAATTTAATGTCGGATTGAGCAGGTGGCTATCTTAAAACACACGATTTCCTGGAACCACAAGAGCGAAAAAGGAAGGCCAGTAGCAAGAAAGAGATAAACGTGGAGAGGCCGCCACCACCGGTGCCGACGACTTCCGTCGAGCATTTTCTCCCCGGAGGGATCGGGACTTTCAGCATTAGCCAAGTTTCATATTTTGATCAGAGGACTCTGCCGAAGCCGGAAGGTTCGGTTTTTACTGGTGCTCGATCGAGTAGCAGCGGTGAGAGAAATGATGAGAACTCCAATGGAAGTGGATTCACTCTGTGGGAGGAATATGCAGTTAAAAAGGGAAAGACAGGGAAGGAGAATATTTTGGGCGATAGACCCCATGGTATGAACTTATTAATCTTTTCATGGGCATGCATGCAAAAACAAAAATTATTCTATAATTATTTCAAGTTTTAGAATAATAAAAAGAGTGAAAATTATGGTGGGCTTGTTAAAGATCTGGGCTTAGCGTATGGGCTGTGCTAAGGTGTTAAGCCCAGACAACACGTCGATGGCTTCTATTTGTCCCTTCCTTTTAAATTTTGGCCTGTGAACAGAACCTCGGGCGAGCACGAGCCAATGGACGGCGTCCATGGAGCGGCCGTCGCAATCATCTTCGAACAACCATCACAACGCTTTCAGTTGTTTCTCATCTTCTCAGTCAGTCTTTATCTTTTTCTCTCTTTCTCCTTTTCAGTTTCATTCTGAAATTCTCAGTGGAATTGATTCCAAGTAAATCTTTGCAGGCCGAGAGGAAAAAAGAACCCGAGCTTCATGGAGATGCTAAAGTCGGCCAAGAGTAACTCTCAGGACGAGGAACTAGACGACGATGGTGACGTTGTCATCAAGAAAGAGATCTCTACCGCCAATAAAGGTATTATGCTGCTACCAGATAGCAATTGAAAGATAATTCTTCCAACTTTCTTTTATTACTGTATTAAACGTATCCTAACTAAACGTTTCGAAATACTTCTGCAGGAGAATTGAGGATTAAAGTTGATGGGAACAGCTCTGATCAAAAGGCGAACACTTCTAGATCAAAGCACTCTGCGACAGAACAACGAAGAAGAAGCAAGATAAACGATAGGCAAGTGTTTCTCCTATTATTCAACTTAGAATTCATTAGTCAGTCGACCAGTGCAGTCAAAGGGAACTTCTTTGTTTTTTGTTATGTACTTGATAATATGACGGTAGCTTGTAGAACCTGCCGTTAACTTGGCTGTAATGTTCATATTAGGAGCATTGTTATTTCTGGAAAATCACTGAATCTAGCCGGTTCCAGTCTTTGATTATAGAGCTTCTATTTACGACTACAATTTTAATTTCATTACTTTTGGCCTAAATCATAGATTGGTAGAATCTACCCAGTTCACGTCCCTTTATCGATGAATCTTTATTGGGAACGAGAAACGAACATTCTTGGGTAGTTTTTATTCCCGCGTTCCTCTTGTGCTCTCTTCACAGTGGTTTCGGTAATAATTTCACCTCAGTTGCATGCTTCTTGGATGTTGTTGCCAACTGCTTCTAATATAACATCTTTTCTGCCTATCATACAGATTTCAGATGCTTAGAGGCCTCATTCCTCATAGTGACCAAAAGAAGGACAAGGCGTCTTTCTTATTAGAGGTGCACTTCTTAATAATTTGCTTTACATTTTCCATGTTATATTTTATTGATCCATAACGTGCTTTGCTATTTTTCTTTTCAGGTGGTTGAGTACATTCAATTCTTACAGGAAAAGGTACAGAAGTATGAAGGTTCATACCACGAATGGAATCGAGAAATTGCTAAATTAATGCCGTTGGTAATCACATGCTTCTAGCTTTTTTTGCATTCAATTCATGATTGAAATAACTCCTCTACTTTTGAATCAGCGTGTTTTATGTATACAATTTGTCGGTAAAGGAATCTGTATTTTGCTTGTAATTGAGGCCCTAAACAATATTGTAAATAGATAATCCGTAAACAGCTAAATTATATTTCTAAATATCACATCTGACTGCGCAGAGAAACAATCAACGAAGTGCAGATGGCTATAATGATCAATCTCGAGGGGTAGATAGTGGGCCTGGTCCTGCACTAGTTTTTTCAGCAAACTTTGTTGAGAAAAATGCCGCTTTATCTCCCCTTGTTCCTGGGAGTTCACATAATGCAGTCGATTCTGACACAAGTTCCGCGACAACCTTGAAAGCAGTTGATCACCATCCTGGAAGAACAAATAACGTAGTACCATTTCCCATGTCCATTCCACCAAAACTTTATGCACCTACAAGGGATGGAACTGTGGTGCCCCAAGCCTCGAGACCATTGTCATCCGACACCGATCACCCTTCATCACAGTCTCAAATCCTGTCGTATCAGGCCAGATGCTACAACAATGACGCTGCTGTTGCAAGTGAATTACAGAAAGAACAAGATTTGACCATTGAAGGGGGTACCGTTAACATCTCAAGTGTATATTCTCAAGGGTGAGATTTTGTAATTTCTTTCTGGTTCATCTTCGATCCTTTTATTTTTATATCCTTGGCCTCTTTATTCTACTCCTCTTTTGTGCACTTACGCAATATTTGAATCACGTCTTTAAAATTTATTTTTGTGAGATCTTATTATCGAGCAGCTCTCAGAGAACAGCGGTTTGGCAACTGAATGACTTGTCAATTTCCTGATGATTTTGCTAGCAGGTTGTTAAATAGTCTCACTCACGCACTGCAGAGTTCAGGGGTGGATCTATCGCAGGCCAGGATCTCTGTGCAAATAGAACTCGGTGAACTAGCAAATAGGAGATCCACAGCTCCATCATCCATTGTCAAGGTATTCAGATGCTTCCTTCGCCACTAGAACAAATATTTGTTGTTATTGTAGGGACTACTGCTAAATCTTTTCATGATTCCTAGGATATCAACATTCCCATCAACGATATGGAGACGATACACACTAGAGTTTCGGCTGCAGAGGATTCCGAGAGGGCTACAAAGAAGCTCAAGACTGTGAAAAGCTTAGTGTGAGAATTCCTTTCTTTTCATAATTTTTTATTCATTTTTTTAGGGGCTCCTCTTCCTTTTCGGGGGGGTTCCCATGTGTCTTCCACTGGTTAAAAACTACACAGTTACCCAAAATTTATGTCTAGTTTAATTCATTTAGTTGGGGATGCCATGGGCACAATGGGCATGTAACATTGACCTGAATTCTTCTTTGTATTTCTATATAGAGGCTTCCACCTAATATATTGTGAAGCTGCTTTTTATTTTTTTTATTTTCTTTTTCCTTTTCGTTTTTTAATCGGAAGTCTTCCAGTTATGTATGTAAATTATGATTGATCTTTTAATAATATAAAGCCTTCCTTTCATCCTTCAA

mRNA sequence

ATGTTTATGTTACGGGGCTCGCCGGCGCCGGGACTGCATTCGAACTGATCTTCTGAATTTGGCTGTGACTACTCACCGTTGGCCGTGGTGGAAGTCTTTCTAGAAGAAGAATTTCCTCTGAAATTTGACGATCGGAAAATCCAGCAATCGAGCTCTGAATTTCCTAGAGCACTACCATTTCCGAAGCGACATAAATCAAAATTCCGCGAGAATTCATCTTCCGGCTGTGGACTGTCAAATCCAAAATTGGCGAAAAATCCGATGGAACTTCCTCAACCCCGTCCGTTTGGAGCCGAAGGAAGCAAATCAACACATGACTTCCTCTCACTGTACACCCATTCAAGTCCACAGCTAGATCCAAGACCATCCTCACAAGGTGGCTATCTTAAAACACACGATTTCCTGGAACCACAAGAGCGAAAAAGGAAGGCCAGTAGCAAGAAAGAGATAAACGTGGAGAGGCCGCCACCACCGGTGCCGACGACTTCCGTCGAGCATTTTCTCCCCGGAGGGATCGGGACTTTCAGCATTAGCCAAGTTTCATATTTTGATCAGAGGACTCTGCCGAAGCCGGAAGGTTCGGTTTTTACTGGTGCTCGATCGAGTAGCAGCGGTGAGAGAAATGATGAGAACTCCAATGGAAGTGGATTCACTCTGTGGGAGGAATATGCAGTTAAAAAGGGAAAGACAGGGAAGGAGAATATTTTGGGCGATAGACCCCATGAACCTCGGGCGAGCACGAGCCAATGGACGGCGTCCATGGAGCGGCCGTCGCAATCATCTTCGAACAACCATCACAACGCTTTCAGTTGTTTCTCATCTTCTCAGCCGAGAGGAAAAAAGAACCCGAGCTTCATGGAGATGCTAAAGTCGGCCAAGAGTAACTCTCAGGACGAGGAACTAGACGACGATGGTGACGTTGTCATCAAGAAAGAGATCTCTACCGCCAATAAAGGAGAATTGAGGATTAAAGTTGATGGGAACAGCTCTGATCAAAAGGCGAACACTTCTAGATCAAAGCACTCTGCGACAGAACAACGAAGAAGAAGCAAGATAAACGATAGATTTCAGATGCTTAGAGGCCTCATTCCTCATAGTGACCAAAAGAAGGACAAGGCGTCTTTCTTATTAGAGGTGGTTGAGTACATTCAATTCTTACAGGAAAAGGTACAGAAGTATGAAGGTTCATACCACGAATGGAATCGAGAAATTGCTAAATTAATGCCGTTGAGAAACAATCAACGAAGTGCAGATGGCTATAATGATCAATCTCGAGGGGTAGATAGTGGGCCTGGTCCTGCACTAGTTTTTTCAGCAAACTTTGTTGAGAAAAATGCCGCTTTATCTCCCCTTGTTCCTGGGAGTTCACATAATGCAGTCGATTCTGACACAAGTTCCGCGACAACCTTGAAAGCAGTTGATCACCATCCTGGAAGAACAAATAACGTAGTACCATTTCCCATGTCCATTCCACCAAAACTTTATGCACCTACAAGGGATGGAACTGTGGTGCCCCAAGCCTCGAGACCATTGTCATCCGACACCGATCACCCTTCATCACAGTCTCAAATCCTGTCGTATCAGGCCAGATGCTACAACAATGACGCTGCTGTTGCAAGTGAATTACAGAAAGAACAAGATTTGACCATTGAAGGGGGTACCGTTAACATCTCAAGTGTATATTCTCAAGGGTTGTTAAATAGTCTCACTCACGCACTGCAGAGTTCAGGGGTGGATCTATCGCAGGCCAGGATCTCTGTGCAAATAGAACTCGGTGAACTAGCAAATAGGAGATCCACAGCTCCATCATCCATTGTCAAGGATATCAACATTCCCATCAACGATATGGAGACGATACACACTAGAGTTTCGGCTGCAGAGGATTCCGAGAGGGCTACAAAGAAGCTCAAGACTGTGAAAAGCTTAGTGTGAGAATTCCTTTCTTTTCATAATTTTTTATTCATTTTTTTAGGGGCTCCTCTTCCTTTTCGGGGGGGTTCCCATGTGTCTTCCACTGGTTAAAAACTACACAGTTACCCAAAATTTATGTCTAGTTTAATTCATTTAGTTGGGGATGCCATGGGCACAATGGGCATGTAACATTGACCTGAATTCTTCTTTGTATTTCTATATAGAGGCTTCCACCTAATATATTGTGAAGCTGCTTTTTATTTTTTTTATTTTCTTTTTCCTTTTCGTTTTTTAATCGGAAGTCTTCCAGTTATGTATGTAAATTATGATTGATCTTTTAATAATATAAAGCCTTCCTTTCATCCTTCAA

Coding sequence (CDS)

ATGGAACTTCCTCAACCCCGTCCGTTTGGAGCCGAAGGAAGCAAATCAACACATGACTTCCTCTCACTGTACACCCATTCAAGTCCACAGCTAGATCCAAGACCATCCTCACAAGGTGGCTATCTTAAAACACACGATTTCCTGGAACCACAAGAGCGAAAAAGGAAGGCCAGTAGCAAGAAAGAGATAAACGTGGAGAGGCCGCCACCACCGGTGCCGACGACTTCCGTCGAGCATTTTCTCCCCGGAGGGATCGGGACTTTCAGCATTAGCCAAGTTTCATATTTTGATCAGAGGACTCTGCCGAAGCCGGAAGGTTCGGTTTTTACTGGTGCTCGATCGAGTAGCAGCGGTGAGAGAAATGATGAGAACTCCAATGGAAGTGGATTCACTCTGTGGGAGGAATATGCAGTTAAAAAGGGAAAGACAGGGAAGGAGAATATTTTGGGCGATAGACCCCATGAACCTCGGGCGAGCACGAGCCAATGGACGGCGTCCATGGAGCGGCCGTCGCAATCATCTTCGAACAACCATCACAACGCTTTCAGTTGTTTCTCATCTTCTCAGCCGAGAGGAAAAAAGAACCCGAGCTTCATGGAGATGCTAAAGTCGGCCAAGAGTAACTCTCAGGACGAGGAACTAGACGACGATGGTGACGTTGTCATCAAGAAAGAGATCTCTACCGCCAATAAAGGAGAATTGAGGATTAAAGTTGATGGGAACAGCTCTGATCAAAAGGCGAACACTTCTAGATCAAAGCACTCTGCGACAGAACAACGAAGAAGAAGCAAGATAAACGATAGATTTCAGATGCTTAGAGGCCTCATTCCTCATAGTGACCAAAAGAAGGACAAGGCGTCTTTCTTATTAGAGGTGGTTGAGTACATTCAATTCTTACAGGAAAAGGTACAGAAGTATGAAGGTTCATACCACGAATGGAATCGAGAAATTGCTAAATTAATGCCGTTGAGAAACAATCAACGAAGTGCAGATGGCTATAATGATCAATCTCGAGGGGTAGATAGTGGGCCTGGTCCTGCACTAGTTTTTTCAGCAAACTTTGTTGAGAAAAATGCCGCTTTATCTCCCCTTGTTCCTGGGAGTTCACATAATGCAGTCGATTCTGACACAAGTTCCGCGACAACCTTGAAAGCAGTTGATCACCATCCTGGAAGAACAAATAACGTAGTACCATTTCCCATGTCCATTCCACCAAAACTTTATGCACCTACAAGGGATGGAACTGTGGTGCCCCAAGCCTCGAGACCATTGTCATCCGACACCGATCACCCTTCATCACAGTCTCAAATCCTGTCGTATCAGGCCAGATGCTACAACAATGACGCTGCTGTTGCAAGTGAATTACAGAAAGAACAAGATTTGACCATTGAAGGGGGTACCGTTAACATCTCAAGTGTATATTCTCAAGGGTTGTTAAATAGTCTCACTCACGCACTGCAGAGTTCAGGGGTGGATCTATCGCAGGCCAGGATCTCTGTGCAAATAGAACTCGGTGAACTAGCAAATAGGAGATCCACAGCTCCATCATCCATTGTCAAGGATATCAACATTCCCATCAACGATATGGAGACGATACACACTAGAGTTTCGGCTGCAGAGGATTCCGAGAGGGCTACAAAGAAGCTCAAGACTGTGAAAAGCTTAGTGTGA

Protein sequence

MELPQPRPFGAEGSKSTHDFLSLYTHSSPQLDPRPSSQGGYLKTHDFLEPQERKRKASSKKEINVERPPPPVPTTSVEHFLPGGIGTFSISQVSYFDQRTLPKPEGSVFTGARSSSSGERNDENSNGSGFTLWEEYAVKKGKTGKENILGDRPHEPRASTSQWTASMERPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQDEELDDDGDVVIKKEISTANKGELRIKVDGNSSDQKANTSRSKHSATEQRRRSKINDRFQMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRNNQRSADGYNDQSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSATTLKAVDHHPGRTNNVVPFPMSIPPKLYAPTRDGTVVPQASRPLSSDTDHPSSQSQILSYQARCYNNDAAVASELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIELGELANRRSTAPSSIVKDINIPINDMETIHTRVSAAEDSERATKKLKTVKSLV

Homology

[Close]

BLAST of CmaCh11G002330 vs. ExPASy Swiss-Prot
Match: Q9LEZ3 (Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2)

HSP 1 Score: 350.9 bits (899), Expect = 2.6e-95
Identity = 246/561 (43.85%), Postives = 332/561 (59.18%), Query Frame = 0


Query: 1   MELPQPRPFGAEGSKSTHDFLSLYTHSSPQLDPR----PSSQGGYLKTHDFLEPQERKRK 60
           MELPQPRPF  +G K THDFLSL +HS+   DP+    PSSQG +LKTHDFL+P E    
Sbjct: 1   MELPQPRPFKTQGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLECVGA 60

Query: 61  ASSKKEIN-----VERPPPPVPTTSVEHFLPGGIGTFSISQVSYF--DQRTLPKPEGSVF 120
                 IN      E+PPPP P   ++H LPGGIGT++IS + YF    + +PKPE    
Sbjct: 61  KEDVSRINSTTTASEKPPPPAPPPPLQHVLPGGIGTYTISPIPYFHHHHQRIPKPE---L 120

Query: 121 TGARSSSSGERN--DENSN---------GSGFTLWEEYAV-KKGKTGKENILGDRPH--- 180
           +     ++ ERN  DENSN          SGFTLW+E A  KKG+T KEN +G+R +   
Sbjct: 121 SPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMRA 180

Query: 181 EPRASTSQWTASMERPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQDEEL 240
           +  A+  QW  + ER SQS +NNH + FS  SSSQ    K+ SFM+M++SAK +SQ+++L
Sbjct: 181 DVAATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDDL 240

Query: 241 DDDGDVVIKKEISTANKG---ELRIKVD--GNSSDQKANTSRSKHSATEQRRRSKINDRF 300
           DD+ D ++KKE S+ ++    +LR+K D  G+ +DQK NT RSKHSATEQRRRSKINDRF
Sbjct: 241 DDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRF 300

Query: 301 QMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRNNQRS 360
           QMLR LIP+SDQK+DKASFLLEV+EYIQFLQEK  KY  SY  WN E AKL+  ++N   
Sbjct: 301 QMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSN--- 360

Query: 361 ADGYNDQSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSATTLKAVDHH 420
               N+Q                  V +  A +P +    +N   S  ++A  +  +DH 
Sbjct: 361 ----NNQ----------------QLVPEGVAFAPKLEEEKNNIPVSVLATAQGV-VIDHP 420

Query: 421 PGRTNNVVPFPMSIPP-KLYAPTRDGTVVPQ-ASRPLSSDTDHPSSQSQILSYQARCYNN 480
              T +  PFP+SI     ++P   G  VPQ  +R  SS+   PS  S+           
Sbjct: 421 TTATTS--PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVEPSPSSR----------- 480

Query: 481 DAAVASELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIELGEL 529
                   ++E+D  +  G + ISSVYSQGL+ +L  AL++SGVDL++A ISV+IEL + 
Sbjct: 481 ------SQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQ 514

[Close]

BLAST of CmaCh11G002330 vs. ExPASy Swiss-Prot
Match: Q9CAA4 (Transcription factor BIM2 OS=Arabidopsis thaliana OX=3702 GN=BIM2 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.8e-47
Identity = 131/351 (37.32%), Postives = 194/351 (55.27%), Query Frame = 0


Query: 202 LKSAKSNSQDEELDDDGDVVIKKEISTANKGELRIKVDGNSSDQKANTSRSKHSATEQRR 261
           +++ K N ++E+  ++ D   K+E  ++N   +    D   +D KA+  RSKHS TEQRR
Sbjct: 1   MRTGKGNQEEEDYGEE-DFNSKREGPSSNT-TVHSNRDSKEND-KASAIRSKHSVTEQRR 60

Query: 262 RSKINDRFQMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLM 321
           RSKIN+RFQ+LR LIP+S+QK+D ASFLLEV++Y+Q+LQEKVQKYEGSY  W++E  KL 
Sbjct: 61  RSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQEPTKLT 120

Query: 322 PLRNNQRSADGYNDQSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSAT 381
           P RNN        +    +++G GP + F   F +     +P +       ++SD + A 
Sbjct: 121 PWRNNHWRVQSLGNHPVAINNGSGPGIPFPGKFEDNTVTSTPAIIAEPQIPIESDKARAI 180

Query: 382 TLKAVDHHPGRTNNVVPFPMSIPPKLYAPTRDGTVVPQASRPLSSDTDHPSSQSQILSYQ 441
           T  +++                                 S+P   D   P  Q  +   Q
Sbjct: 181 TGISIE---------------------------------SQPELDDKGLPPLQPILPMVQ 240

Query: 442 ARCYNNDAAVASELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQ 501
               N   A +  L +  DL IEGGT++ISS YS  LL+SLT ALQ++G+DLSQA++SVQ
Sbjct: 241 GEQANECPATSDGLGQSNDLVIEGGTISISSAYSHELLSSLTQALQNAGIDLSQAKLSVQ 300

Query: 502 IELGELANRRSTAPSSIVKDINIPINDMETIHTRVSAAEDSERATKKLKTV 553
           I+LG+ AN+  T      K+   P++  +T     S  E+SE + K++KT+
Sbjct: 301 IDLGKRANQGLTHEEPSSKN---PLS-YDTQGRDSSVEEESEHSHKRMKTL 311

[Close]

BLAST of CmaCh11G002330 vs. ExPASy Swiss-Prot
Match: Q9FMB6 (Transcription factor BIM3 OS=Arabidopsis thaliana OX=3702 GN=BIM3 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-27
Identity = 117/348 (33.62%), Postives = 172/348 (49.43%), Query Frame = 0


Query: 208 NSQDEELDDDGDVVIKKEISTANKGELRIKVDGNSSDQKANTSRSKHSATEQRRRSKIND 267
           NS D  +DD  +  +   + + N        D ++  +  N+ RSKHS TEQRRRSKIN+
Sbjct: 2   NSHD--IDDQLEADVYSNLPSRN--------DSSTGRRNRNSCRSKHSETEQRRRSKINE 61

Query: 268 RFQMLRGLIP--HSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRN 327
           RFQ L  +IP   +DQK+DKASFLLEV+EYI FLQEKV  YE S+  W +   KL+P RN
Sbjct: 62  RFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYEDSHQMWYQSPTKLIPWRN 121

Query: 328 NQRSADGYNDQSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSATTLKA 387
           +  S    ND  + V S       FS+N  +K AA S  +   ++N+V+ D  SA + K 
Sbjct: 122 SHGSVAEENDHPQIVKS-------FSSN--DKVAASSGFLL-DTYNSVNPDIDSAVSTKI 181

Query: 388 VDHHPGRTNNVVPFPMSIPPKLYAPTRDGTVVPQASRPLSSDTDHPSSQSQILSYQARCY 447
            +H P    + V   +   P L                      H   Q +       C+
Sbjct: 182 PEHSP---VSAVSSYLRTEPSL------------------QFVQHDFWQPKTSCGTINCF 241

Query: 448 NNDAAVASELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIELG 507
            N+   + E            + ++S+V SQ +LN+LT AL+SSGV++S+  ISVQ+ L 
Sbjct: 242 TNELLTSDEKT----------SASLSTVCSQRVLNTLTEALKSSGVNMSETMISVQLSLR 297

Query: 508 ELANRRSTAPSSIVKDINIPINDME---TIHTRVSAAEDSERATKKLK 551
           +  +R  +  +   +D    I D E      TR S   D + + K+++
Sbjct: 302 KREDREYSVAAFASEDNGNSIADEEGDSPTETR-SFCNDIDHSQKRIR 297

[Close]

BLAST of CmaCh11G002330 vs. ExPASy Swiss-Prot
Match: Q9FN69 (Transcription factor GLABRA 3 OS=Arabidopsis thaliana OX=3702 GN=GL3 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 9.6e-05
Identity = 45/162 (27.78%), Postives = 75/162 (46.30%), Query Frame = 0


Query: 194 KNPSFMEMLKSAKSNSQDEELDDDGDVVIKKEISTANKGELRIKVDGNSSDQKANTSRSK 253
           K  SF    KS+ S+S    +      ++KK I    +   + K+  +S + +  T    
Sbjct: 384 KQSSFTRWKKSSSSSSGTATVTAPSQGMLKKIIFDVPRVHQKEKLMLDSPEARDET--GN 443

Query: 254 HSATEQRRRSKINDRFQMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEW 313
           H+  E++RR K+N+RF  LR +IP S  K DK S L + +EY+Q L+ +VQ+ E      
Sbjct: 444 HAVLEKKRREKLNERFMTLRKIIP-SINKIDKVSILDDTIEYLQELERRVQELESCREST 503

Query: 314 NREIAKLMPLRNNQRSADGYNDQSRGVDSGPGPALVFSANFV 356
           + E    M ++  +    G    +   ++  G     S N V
Sbjct: 504 DTETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNV 542

[Close]

BLAST of CmaCh11G002330 vs. ExPASy Swiss-Prot
Match: Q9CAD0 (Transcription factor EGL1 OS=Arabidopsis thaliana OX=3702 GN=BHLH2 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 6.3e-04
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 206 KSNSQDEELDDDGDVVIKK---EISTANKGELRIKVDGNSSDQKANTSRSKHSATEQRRR 265
           K +S  + L +    +IKK   E+   NK E   ++  ++ ++  N     H+ +E++RR
Sbjct: 363 KRSSSVKTLGEKSQKMIKKILFEVPLMNKKE---ELLPDTPEETGN-----HALSEKKRR 422

Query: 266 SKINDRFQMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMP 325
            K+N+RF  LR +IP S  K DK S L + +EY+Q LQ++VQ+ E      + E    M 
Sbjct: 423 EKLNERFMTLRSIIP-SISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTETRITMM 482

Query: 326 LR------NNQRSADGYNDQSRGVDSGPG 346
            R        + SA+  N + +G D   G
Sbjct: 483 KRKKPDDEEERASANCMNSKRKGSDVNVG 502

[Close]

BLAST of CmaCh11G002330 vs. TAIR 10
Match: AT5G08130.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 350.9 bits (899), Expect = 1.9e-96
Identity = 246/561 (43.85%), Postives = 332/561 (59.18%), Query Frame = 0


Query: 1   MELPQPRPFGAEGSKSTHDFLSLYTHSSPQLDPR----PSSQGGYLKTHDFLEPQERKRK 60
           MELPQPRPF  +G K THDFLSL +HS+   DP+    PSSQG +LKTHDFL+P E    
Sbjct: 1   MELPQPRPFKTQGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLECVGA 60

Query: 61  ASSKKEIN-----VERPPPPVPTTSVEHFLPGGIGTFSISQVSYF--DQRTLPKPEGSVF 120
                 IN      E+PPPP P   ++H LPGGIGT++IS + YF    + +PKPE    
Sbjct: 61  KEDVSRINSTTTASEKPPPPAPPPPLQHVLPGGIGTYTISPIPYFHHHHQRIPKPE---L 120

Query: 121 TGARSSSSGERN--DENSN---------GSGFTLWEEYAV-KKGKTGKENILGDRPH--- 180
           +     ++ ERN  DENSN          SGFTLW+E A  KKG+T KEN +G+R +   
Sbjct: 121 SPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMRA 180

Query: 181 EPRASTSQWTASMERPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQDEEL 240
           +  A+  QW  + ER SQS +NNH + FS  SSSQ    K+ SFM+M++SAK +SQ+++L
Sbjct: 181 DVAATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDDL 240

Query: 241 DDDGDVVIKKEISTANKG---ELRIKVD--GNSSDQKANTSRSKHSATEQRRRSKINDRF 300
           DD+ D ++KKE S+ ++    +LR+K D  G+ +DQK NT RSKHSATEQRRRSKINDRF
Sbjct: 241 DDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRF 300

Query: 301 QMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRNNQRS 360
           QMLR LIP+SDQK+DKASFLLEV+EYIQFLQEK  KY  SY  WN E AKL+  ++N   
Sbjct: 301 QMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSN--- 360

Query: 361 ADGYNDQSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSATTLKAVDHH 420
               N+Q                  V +  A +P +    +N   S  ++A  +  +DH 
Sbjct: 361 ----NNQ----------------QLVPEGVAFAPKLEEEKNNIPVSVLATAQGV-VIDHP 420

Query: 421 PGRTNNVVPFPMSIPP-KLYAPTRDGTVVPQ-ASRPLSSDTDHPSSQSQILSYQARCYNN 480
              T +  PFP+SI     ++P   G  VPQ  +R  SS+   PS  S+           
Sbjct: 421 TTATTS--PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVEPSPSSR----------- 480

Query: 481 DAAVASELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIELGEL 529
                   ++E+D  +  G + ISSVYSQGL+ +L  AL++SGVDL++A ISV+IEL + 
Sbjct: 481 ------SQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQ 514

[Close]

BLAST of CmaCh11G002330 vs. TAIR 10
Match: AT5G08130.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 350.9 bits (899), Expect = 1.9e-96
Identity = 246/561 (43.85%), Postives = 332/561 (59.18%), Query Frame = 0


Query: 1   MELPQPRPFGAEGSKSTHDFLSLYTHSSPQLDPR----PSSQGGYLKTHDFLEPQERKRK 60
           MELPQPRPF  +G K THDFLSL +HS+   DP+    PSSQG +LKTHDFL+P E    
Sbjct: 1   MELPQPRPFKTQGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLECVGA 60

Query: 61  ASSKKEIN-----VERPPPPVPTTSVEHFLPGGIGTFSISQVSYF--DQRTLPKPEGSVF 120
                 IN      E+PPPP P   ++H LPGGIGT++IS + YF    + +PKPE    
Sbjct: 61  KEDVSRINSTTTASEKPPPPAPPPPLQHVLPGGIGTYTISPIPYFHHHHQRIPKPE---L 120

Query: 121 TGARSSSSGERN--DENSN---------GSGFTLWEEYAV-KKGKTGKENILGDRPH--- 180
           +     ++ ERN  DENSN          SGFTLW+E A  KKG+T KEN +G+R +   
Sbjct: 121 SPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMRA 180

Query: 181 EPRASTSQWTASMERPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQDEEL 240
           +  A+  QW  + ER SQS +NNH + FS  SSSQ    K+ SFM+M++SAK +SQ+++L
Sbjct: 181 DVAATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDDL 240

Query: 241 DDDGDVVIKKEISTANKG---ELRIKVD--GNSSDQKANTSRSKHSATEQRRRSKINDRF 300
           DD+ D ++KKE S+ ++    +LR+K D  G+ +DQK NT RSKHSATEQRRRSKINDRF
Sbjct: 241 DDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRF 300

Query: 301 QMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRNNQRS 360
           QMLR LIP+SDQK+DKASFLLEV+EYIQFLQEK  KY  SY  WN E AKL+  ++N   
Sbjct: 301 QMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSN--- 360

Query: 361 ADGYNDQSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSATTLKAVDHH 420
               N+Q                  V +  A +P +    +N   S  ++A  +  +DH 
Sbjct: 361 ----NNQ----------------QLVPEGVAFAPKLEEEKNNIPVSVLATAQGV-VIDHP 420

Query: 421 PGRTNNVVPFPMSIPP-KLYAPTRDGTVVPQ-ASRPLSSDTDHPSSQSQILSYQARCYNN 480
              T +  PFP+SI     ++P   G  VPQ  +R  SS+   PS  S+           
Sbjct: 421 TTATTS--PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVEPSPSSR----------- 480

Query: 481 DAAVASELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIELGEL 529
                   ++E+D  +  G + ISSVYSQGL+ +L  AL++SGVDL++A ISV+IEL + 
Sbjct: 481 ------SQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQ 514

[Close]

BLAST of CmaCh11G002330 vs. TAIR 10
Match: AT5G08130.6 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 347.8 bits (891), Expect = 1.6e-95
Identity = 247/562 (43.95%), Postives = 332/562 (59.07%), Query Frame = 0


Query: 1   MELPQPRPFGAE----GSKSTHDFLSLYTHSSPQLDPR----PSSQGGYLKTHDFLEPQE 60
           MELPQPRPF  +    G K THDFLSL +HS+   DP+    PSSQG +LKTHDFL+P E
Sbjct: 1   MELPQPRPFKTQEFRTGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLE 60

Query: 61  RKRKASSKKEIN-----VERPPPPVPTTSVEHFLPGGIGTFSISQVSYF--DQRTLPKPE 120
                     IN      E+PPPP P   ++H LPGGIGT++IS + YF    + +PKPE
Sbjct: 61  CVGAKEDVSRINSTTTASEKPPPPAPPPPLQHVLPGGIGTYTISPIPYFHHHHQRIPKPE 120

Query: 121 GSVFTGARSSSSGERN--DENSN---------GSGFTLWEEYAV-KKGKTGKENILGDRP 180
               +     ++ ERN  DENSN          SGFTLW+E A  KKG+T KEN +G+R 
Sbjct: 121 ---LSPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERV 180

Query: 181 HEPRASTSQWTASMERPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQDEE 240
           +  RA+  QW  + ER SQS +NNH + FS  SSSQ    K+ SFM+M++SAK +SQ+++
Sbjct: 181 N-MRATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDD 240

Query: 241 LDDDGDVVIKKEISTANKG---ELRIKVD--GNSSDQKANTSRSKHSATEQRRRSKINDR 300
           LDD+ D ++KKE S+ ++    +LR+K D  G+ +DQK NT RSKHSATEQRRRSKINDR
Sbjct: 241 LDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDR 300

Query: 301 FQMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRNNQR 360
           FQMLR LIP+SDQK+DKASFLLEV+EYIQFLQEK  KY  SY  WN E AKL+  ++N  
Sbjct: 301 FQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWQSN-- 360

Query: 361 SADGYNDQSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSATTLKAVDH 420
                N+Q                  V +  A +P +    +N   S  ++A  +  +DH
Sbjct: 361 -----NNQ----------------QLVPEGVAFAPKLEEEKNNIPVSVLATAQGV-VIDH 420

Query: 421 HPGRTNNVVPFPMSIPP-KLYAPTRDGTVVPQ-ASRPLSSDTDHPSSQSQILSYQARCYN 480
               T +  PFP+SI     ++P   G  VPQ  +R  SS+   PS  S+          
Sbjct: 421 PTTATTS--PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVEPSPSSR---------- 480

Query: 481 NDAAVASELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIELGE 529
                    ++E+D  +  G + ISSVYSQGL+ +L  AL++SGVDL++A ISV+IEL +
Sbjct: 481 -------SQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAK 514

[Close]

BLAST of CmaCh11G002330 vs. TAIR 10
Match: AT5G08130.5 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 345.9 bits (886), Expect = 6.0e-95
Identity = 245/565 (43.36%), Postives = 329/565 (58.23%), Query Frame = 0


Query: 1   MELPQPRPFGAE----GSKSTHDFLSLYTHSSPQLDPR----PSSQGGYLKTHDFLEPQE 60
           MELPQPRPF  +    G K THDFLSL +HS+   DP+    PSSQG +LKTHDFL+P E
Sbjct: 1   MELPQPRPFKTQEFRTGRKPTHDFLSLCSHSTVHPDPKPTPPPSSQGSHLKTHDFLQPLE 60

Query: 61  RKRKASSKKEIN-----VERPPPPVPTTSVEHFLPGGIGTFSISQVSYF--DQRTLPKPE 120
                     IN      E+PPPP P   ++H LPGGIGT++IS + YF    + +PKPE
Sbjct: 61  CVGAKEDVSRINSTTTASEKPPPPAPPPPLQHVLPGGIGTYTISPIPYFHHHHQRIPKPE 120

Query: 121 GSVFTGARSSSSGERN--DENSN---------GSGFTLWEEYAV-KKGKTGKENILGDRP 180
               +     ++ ERN  DENSN          SGFTLW+E A  KKG+T KEN +G+R 
Sbjct: 121 ---LSPPMMFNANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERV 180

Query: 181 H---EPRASTSQWTASMERPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQ 240
           +   +  A+  QW  + ER SQS +NNH + FS  SSSQ    K+ SFM+M++SAK +SQ
Sbjct: 181 NMRADVAATVGQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQ 240

Query: 241 DEELDDDGDVVIKKEISTANKG---ELRIKVD--GNSSDQKANTSRSKHSATEQRRRSKI 300
           +++LDD+ D ++KKE S+ ++    +LR+K D  G+ +DQK NT RSKHSATEQRRRSKI
Sbjct: 241 EDDLDDEEDFIMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKI 300

Query: 301 NDRFQMLRGLIPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRN 360
           NDRFQMLR LIP+SDQK+DKASFLLEV+EYIQFLQEK  KY  SY  WN E AKL+   N
Sbjct: 301 NDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWSN 360

Query: 361 NQRSADGYNDQSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSATTLKA 420
           N +                          V +  A +P +    +N   S  ++A  +  
Sbjct: 361 NNQ------------------------QLVPEGVAFAPKLEEEKNNIPVSVLATAQGV-V 420

Query: 421 VDHHPGRTNNVVPFPMSIPP-KLYAPTRDGTVVPQ-ASRPLSSDTDHPSSQSQILSYQAR 480
           +DH    T +  PFP+SI     ++P   G  VPQ  +R  SS+   PS  S+       
Sbjct: 421 IDHPTTATTS--PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVEPSPSSR------- 480

Query: 481 CYNNDAAVASELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIE 529
                       ++E+D  +  G + ISSVYSQGL+ +L  AL++SGVDL++A ISV+IE
Sbjct: 481 ----------SQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIE 517

[Close]

BLAST of CmaCh11G002330 vs. TAIR 10
Match: AT5G08130.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 2.6e-66
Identity = 185/435 (42.53%), Postives = 254/435 (58.39%), Query Frame = 0


Query: 116 SSGERN--DENSN---------GSGFTLWEEYAV-KKGKTGKENILGDRPH---EPRAST 175
           ++ ERN  DENSN          SGFTLW+E A  KKG+T KEN +G+R +   +  A+ 
Sbjct: 4   NANERNVLDENSNSNCSSYAAASSGFTLWDESASGKKGQTRKENSVGERVNMRADVAATV 63

Query: 176 SQWTASMERPSQSSSNNHHNAFSCFSSSQPRGKKNPSFMEMLKSAKSNSQDEELDDDGDV 235
            QW  + ER SQS +NNH + FS  SSSQ    K+ SFM+M++SAK +SQ+++LDD+ D 
Sbjct: 64  GQWPVA-ERRSQSLTNNHMSGFSSLSSSQGSVLKSQSFMDMIRSAKGSSQEDDLDDEEDF 123

Query: 236 VIKKEISTANKG---ELRIKVD--GNSSDQKANTSRSKHSATEQRRRSKINDRFQMLRGL 295
           ++KKE S+ ++    +LR+K D  G+ +DQK NT RSKHSATEQRRRSKINDRFQMLR L
Sbjct: 124 IMKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRFQMLRQL 183

Query: 296 IPHSDQKKDKASFLLEVVEYIQFLQEKVQKYEGSYHEWNREIAKLMPLRNNQRSADGYND 355
           IP+SDQK+DKASFLLEV+EYIQFLQEK  KY  SY  WN E AKL+   NN +       
Sbjct: 184 IPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHEPAKLLNWSNNNQ------- 243

Query: 356 QSRGVDSGPGPALVFSANFVEKNAALSPLVPGSSHNAVDSDTSSATTLKAVDHHPGRTNN 415
                              V +  A +P +    +N   S  ++A  +  +DH    T +
Sbjct: 244 -----------------QLVPEGVAFAPKLEEEKNNIPVSVLATAQGV-VIDHPTTATTS 303

Query: 416 VVPFPMSIPP-KLYAPTRDGTVVPQ-ASRPLSSDTDHPSSQSQILSYQARCYNNDAAVAS 475
             PFP+SI     ++P   G  VPQ  +R  SS+   PS  S+                 
Sbjct: 304 --PFPLSIQSNSFFSPVIAGNPVPQFHARVASSEAVEPSPSSR----------------- 363

Query: 476 ELQKEQDLTIEGGTVNISSVYSQGLLNSLTHALQSSGVDLSQARISVQIELGELANRRST 529
             ++E+D  +  G + ISSVYSQGL+ +L  AL++SGVDL++A ISV+IEL + ++  S 
Sbjct: 364 SQKEEEDEEVLEGNIRISSVYSQGLVKTLREALENSGVDLTKASISVEIELAKQSSSSSF 393

The following BLAST results are available for this feature:

BLAST of CmaCh11G002330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEZ3	2.6e-95	43.85	Transcription factor BIM1 OS=Arabidopsis thaliana OX=3702 GN=BIM1 PE=1 SV=2	[more]
Q9CAA4	7.8e-47	37.32	Transcription factor BIM2 OS=Arabidopsis thaliana OX=3702 GN=BIM2 PE=1 SV=1	[more]
Q9FMB6	1.1e-27	33.62	Transcription factor BIM3 OS=Arabidopsis thaliana OX=3702 GN=BIM3 PE=1 SV=1	[more]
Q9FN69	9.6e-05	27.78	Transcription factor GLABRA 3 OS=Arabidopsis thaliana OX=3702 GN=GL3 PE=1 SV=1	[more]
Q9CAD0	6.3e-04	30.87	Transcription factor EGL1 OS=Arabidopsis thaliana OX=3702 GN=BHLH2 PE=1 SV=1	[more]

BLAST of CmaCh11G002330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08130.2	1.9e-96	43.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.4	1.9e-96	43.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.6	1.6e-95	43.95	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.5	6.0e-95	43.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G08130.3	2.6e-66	42.53	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 296..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 410..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 418..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..130
None	No IPR available	PANTHER	PTHR46412:SF3	TRANSCRIPTION FACTOR BIM1	coord: 1..551
None	No IPR available	CDD	cd11453	bHLH_AtBIM_like	coord: 248..324 e-value: 2.12253E-39 score: 136.449
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 255..305 e-value: 2.8E-13 score: 60.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 251..300 e-value: 1.0E-14 score: 54.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 249..299 score: 16.348412
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 246..325 e-value: 1.6E-27 score: 97.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 248..320
IPR044295	Transcription factor BIM1/2/3	PANTHER	PTHR46412	BES1-INTERACTING MYC-LIKE PROTEIN	coord: 1..551

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G002330.1	CmaCh11G002330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity