CmaCh11G002280 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGGGCATACACTCGATTGCTGGCGGAAACCGCTTGTTTGGCGGCGGAGGAGGTGGCGGCGGGGACCGTAGCCTGAGGCCCCACCTCCACCACCACCAGAACCACCAAGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACAAAGTTCTGTTATTACAATAACTATAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGCCGTTACTGGACCAAAGGCGGCGTCCTACGCAACGTTCCTGTCGGTGGTGGCTGTCGGAAAACCAAACGAGCTTCCAAGTCCAAGCCGACATCTGACACAACCGGGCCTCCACCTCCACTTCACGAACAGAAATCCACCTCTCATTCTAGCAGTGAGAGCTCTAGCCTCACCGCCGCAACAACAACCGCCGCCGCGGCAACCGAGGCTGTTTCCGCTCCGTCTACGAGTTCCGCGTCGACTCTATTAAGCGTACAGGATTCGAAATTGTTCCCCACTCCAAGCACAAACACGAATTTCGAGATGGCGGCAGCTCCAGTTTCGGACTGCGGAATTTTCTCGGAAATTGGAAGCTTCACGAGCTTGATCACGTCGTCGAACGAGACATTGCCGTTCGGATTCGGCAACATCGCTGACGCGACGCCTTTCGGGATGAATCATCAGTTTCAAAATCAATGGACGCCACAGAGAATGATGAACGTTAACGATGAACTAAAGATGCAGGAAATCACAGGCGGCGGCGGCGGCGGGTACATGGATCAGACGGCTCACGTCGATCCATCAGGGCTGCAGAATAGCAGATCAAGTAACATTGGATTCGGACCGTTGGATTGGCAGTCAAACGGAGATCATCAGGTTCTTTTTGATCTTCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAATGGAGTGATCCAGACCCCCCCAATCTGTACCTTCCGTAA ATGCAGGGCATACACTCGATTGCTGGCGGAAACCGCTTGTTTGGCGGCGGAGGAGGTGGCGGCGGGGACCGTAGCCTGAGGCCCCACCTCCACCACCACCAGAACCACCAAGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACAAAGTTCTGTTATTACAATAACTATAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGCCGTTACTGGACCAAAGGCGGCGTCCTACGCAACGTTCCTGTCGGTGGTGGCTGTCGGAAAACCAAACGAGCTTCCAAGTCCAAGCCGACATCTGACACAACCGGGCCTCCACCTCCACTTCACGAACAGAAATCCACCTCTCATTCTAGCAGTGAGAGCTCTAGCCTCACCGCCGCAACAACAACCGCCGCCGCGGCAACCGAGGCTGTTTCCGCTCCGTCTACGAGTTCCGCGTCGACTCTATTAAGCGTACAGGATTCGAAATTGTTCCCCACTCCAAGCACAAACACGAATTTCGAGATGGCGGCAGCTCCAGTTTCGGACTGCGGAATTTTCTCGGAAATTGGAAGCTTCACGAGCTTGATCACGTCGTCGAACGAGACATTGCCGTTCGGATTCGGCAACATCGCTGACGCGACGCCTTTCGGGATGAATCATCAGTTTCAAAATCAATGGACGCCACAGAGAATGATGAACGTTAACGATGAACTAAAGATGCAGGAAATCACAGGCGGCGGCGGCGGCGGGTACATGGATCAGACGGCTCACGTCGATCCATCAGGGCTGCAGAATAGCAGATCAAGTAACATTGGATTCGGACCGTTGGATTGGCAGTCAAACGGAGATCATCAGGTTCTTTTTGATCTTCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAATGGAGTGATCCAGACCCCCCCAATCTGTACCTTCCGTAA ATGCAGGGCATACACTCGATTGCTGGCGGAAACCGCTTGTTTGGCGGCGGAGGAGGTGGCGGCGGGGACCGTAGCCTGAGGCCCCACCTCCACCACCACCAGAACCACCAAGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACAAAGTTCTGTTATTACAATAACTATAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGCCGTTACTGGACCAAAGGCGGCGTCCTACGCAACGTTCCTGTCGGTGGTGGCTGTCGGAAAACCAAACGAGCTTCCAAGTCCAAGCCGACATCTGACACAACCGGGCCTCCACCTCCACTTCACGAACAGAAATCCACCTCTCATTCTAGCAGTGAGAGCTCTAGCCTCACCGCCGCAACAACAACCGCCGCCGCGGCAACCGAGGCTGTTTCCGCTCCGTCTACGAGTTCCGCGTCGACTCTATTAAGCGTACAGGATTCGAAATTGTTCCCCACTCCAAGCACAAACACGAATTTCGAGATGGCGGCAGCTCCAGTTTCGGACTGCGGAATTTTCTCGGAAATTGGAAGCTTCACGAGCTTGATCACGTCGTCGAACGAGACATTGCCGTTCGGATTCGGCAACATCGCTGACGCGACGCCTTTCGGGATGAATCATCAGTTTCAAAATCAATGGACGCCACAGAGAATGATGAACGTTAACGATGAACTAAAGATGCAGGAAATCACAGGCGGCGGCGGCGGCGGGTACATGGATCAGACGGCTCACGTCGATCCATCAGGGCTGCAGAATAGCAGATCAAGTAACATTGGATTCGGACCGTTGGATTGGCAGTCAAACGGAGATCATCAGGTTCTTTTTGATCTTCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAATGGAGTGATCCAGACCCCCCCAATCTGTACCTTCCGTAA MQGIHSIAGGNRLFGGGGGGGGDRSLRPHLHHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRASKSKPTSDTTGPPPPLHEQKSTSHSSSESSSLTAATTTAAAATEAVSAPSTSSASTLLSVQDSKLFPTPSTNTNFEMAAAPVSDCGIFSEIGSFTSLITSSNETLPFGFGNIADATPFGMNHQFQNQWTPQRMMNVNDELKMQEITGGGGGGYMDQTAHVDPSGLQNSRSSNIGFGPLDWQSNGDHQVLFDLPNAVDQAYWSQNQWSDPDPPNLYLP Homology
BLAST of CmaCh11G002280 vs. ExPASy Swiss-Prot
Match: Q8LDR0 (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana OX=3702 GN=DOF5.4 PE=2 SV=2) HSP 1 Score: 228.0 bits (580), Expect = 1.4e-58 Identity = 159/334 (47.60%), Postives = 197/334 (58.98%), Query Frame = 0
BLAST of CmaCh11G002280 vs. ExPASy Swiss-Prot
Match: Q6Z345 (Dof zinc finger protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF4 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 7.7e-28 Identity = 83/179 (46.37%), Postives = 109/179 (60.89%), Query Frame = 0
BLAST of CmaCh11G002280 vs. ExPASy Swiss-Prot
Match: Q9M1E6 (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-26 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of CmaCh11G002280 vs. ExPASy Swiss-Prot
Match: Q84TE9 (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-26 Identity = 60/98 (61.22%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of CmaCh11G002280 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-26 Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of CmaCh11G002280 vs. TAIR 10
Match: AT5G60850.1 (OBF binding protein 4 ) HSP 1 Score: 228.0 bits (580), Expect = 1.0e-59 Identity = 159/334 (47.60%), Postives = 197/334 (58.98%), Query Frame = 0
BLAST of CmaCh11G002280 vs. TAIR 10
Match: AT3G45610.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-27 Identity = 53/79 (67.09%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of CmaCh11G002280 vs. TAIR 10
Match: AT5G62940.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-27 Identity = 56/88 (63.64%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of CmaCh11G002280 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 ) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-27 Identity = 60/98 (61.22%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of CmaCh11G002280 vs. TAIR 10
Match: AT5G65590.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 117.5 bits (293), Expect = 2.0e-26 Identity = 60/99 (60.61%), Postives = 69/99 (69.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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