CmaCh11G001950 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G001950
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionpre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1
LocationCma_Chr11: 989597 .. 1002470 (+)
RNA-Seq ExpressionCmaCh11G001950
SyntenyCmaCh11G001950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGTTGTCTCATTTATGTTTTTTTTTTTTTTTTATTGCCATCGTCAATAAAATTTATCGATCATAATAGGACGATTAAAATAAAGTTGATTAATTGATCAATCGAAAGATCATTTCAATTTCATTAGTAACGAGGATTAATCCGTTTAGACAGTATAATCGAGAATGAACAGGATTTTGTGTTGTAAATGACATCAACAGAGTCAAATCTCTCTTGTGCTCCAACGCTCTAAATCTCGAAGGTCCTGATAGGATTATCTGAACTATCTCTTTTCTCTCACTCGGTTAATTTATTCCATCCATCTGAATGATCGGTAAAACCCATATCAATATAATTAATATAATAAAATAATAAAATTGAAGGGTTTAGCCAAAACCCATAGAATTTAATTAATATAATCATAATTCAATGTAGTGCAGAAAAAAAAAAAAAAACCCTATTTTTGTACTAGAAAAAGCTAATAATTCAATATAGAATTAAAGTATATATTAATTTTATTTAGAGGTTTTAATTATGATATTTAATTAAACACGTTGAATTTTATCTAATTTATACAGCGAAGTAAAAATAGACAAAAGGAAAGGAAGAGGAAAAGGGAAAAAGGAAATAAATAAATAAATAAGAGATCTTATTTTCGCTCTCATTTCCTCTACTGCCCACTCTTTGCGACTTCTCCTCCGGTGTTAATTATATCCGGCCGAAGCTTCTCCCGCTCTGGAGACTACGCGCGAACGACGTTCAGCTACAGAGGTTGCTCCAAGATCGTGTTTTGCGTGATTCTTCCATCAATCCTTCAGCACAGAGTTCGAACGCTGACAAGACGTCCGTTTGCGCGACGCCGAGCGTTCACCGGCGACCACGCGGCGGATTTGCGATCCTCCAAGTGTTTCTTCACGAAGATTCGCTTCTAGCCAGGTTTTATATTACAGAATGTTTGAAAGCCTAAATTTCAAATGTCTGGTGTATTAGACTCGATTTGGGATTGAGTTACGTTAACTTATTTGATTAGAAGAAAAAACAAGACACTTAATTAGGGAGATTTGCAATGAATAGAGTGAGTCGGTGATAAGTCGGAGTGATTTATAGGGAGGAAGGGTCATAGTAGAGTTATTGGCTAGTTATTTGTAGCTATCTTTCTGTCTTTATTTTTTCTTTTCGCTATCACGTTGAACGTTGAGACATTTGGTGTGCAACCATTCTTCCTATCTTGTGGAATGTTCGGCTTGCGAAAAGTAGGAGAGTTTTTGTTGAAGTTTTAGAAAATCCCTGTGGAGGTGTGTTGATTTCTTCATCTCTTATTATTGACTCTAGGAGGTTTTTTGCTGGTAATTTATAGTTTGATTAATTTCTACGATTTCCTTTTCTGGTGGGGCTTTCCCTCTTTAATTGTTCCTCATTTACCAGTTAAATTTATTTTCTGTTGTTTCTTAGAATCGAACTAATTTACATTTTTCTCAAAAGTAATGCATGACATGTCATTTGAATCGTTTTGTTATGCAATAGGAAACCTTTTGGTTTGACTGCCAAACTCAATTTCAGGGAGATGGGGGGAGAAAATGACATGAAAACGTGGATTTCTGATCAGTTAATGTCACTGCTTGGTTTCTCTCAGCCAACGATTGTACAGTATATGATTGGACTATGTACGCTTCTCCTTATTTATTAAATAAACATTCCCTTTGGTATTTGAATTATGGATTGTAAAAGATATGGTTTTAATAGTGTTTTTGATGTCCACAATTCTATTGCAGCCAAACAAGCAGCATCACCTGCCGATGTAGTGAGCAAGTTGGTGGTGGATTTTGGCTTGCCATCTTCCAATGAAACATTGGCTTTTGCTGAAGGAATTTTCTCTAGAGTGCCACGCAAGAAATCAACTGGTTTAAATGTAATATTTCAGTTGAAATTTTGCTTACTGTATAAATGTGATTCATATATTAAGTGTTCTTTCGTGTTTTTCTGCTCTATGCCTCCCTTCACTTATTGATTTATAGCTTTCTTGAGATTGGATTGCTTATTTATTGTCCTTCAGTCATGTCCTATAGTATCGTTTCTTTTATCCTGCCTCAGCTTTATCAGAAGCAAGAGAGAGAAGCTGCAATTTTAGCAAGAAATCAAAAAAAATACACACTACTCGATGCTGACGACGAAGAGGTTCTTGAAGATAAAGGAGGCAGTGGTGATCCCCGAGAAACAGAAAATCGCAAAAAACGCTTTAGAAAGAAAAACGAATATCAAGAAGATGAAGATGATGAGGAAGTATGAGATATGAAAATGTATATATGTATGGATTTTTTTTTGTTGGTTAAATTTTTTCTTACTTGATGGGACAATGCAGGAAAGTGCTCTTGAAAGAGAAAATAGGCAGGTTAAAAGACGGACTTCCAGTTCTGAAGACGATGGCTCTGAGGTATTCATTTGAGTTTATTTGGGATTTATCTTCTTAAGTAATAGTGACAAATGTTTCTTTAATACTAGTATGTCTTTTTCTTAGATAAAAATGTATTTAGTTAAACAAGTTTACTAACGGAAGTCATGTAGTTCCCTCTGCTCTCTTAACATCATGTTTAAATTGAAATGCAGTCGGAGGAAGAGCGACAGCGTGATCAAAGAGAGAGGGAGCAATTAGAGCGAAATATAAGAGAACGTGATGCTGCTGGAACCAAAAAGGTATACTCGTAGAAATTGCTATTACCTTTTTTTCCCTCTCTACTGAAAATGAATCATCCTTATTTTAATTTATTGAATCAAGAAAAAACGTTACAAGCAAAGTCTAGAGTTAAACAAAATAAAACATGAAGCTATGGAATCTCATAAACCCCGCCCTACAGTGCCTCCCCAAAAGAACTCCTTAGGAGTTGTTCTCTTTTTGCAAACTTCATACAGCCATTAATTTTGCAGCTATGTCCTAAGAATTCCATTACCTCTTGTTCTGATTCTAGCCGTTTTTGACAGTTAACAGAACAGAAATTGAGCAGGAAGGAGGAAGGTAACTAATCTTGAATTTTGATCAGTGAATTATAATTTGTGCAATGGCATGCACTCTTCTTCTGCTTATGATATCATTGCCTTGCATTTAATGTTCCAGAAGAGGCAATTCGGAGATCCAAAGCTTTGGAGAATGATGGAACTGATACTTTGAGGTTTGCTACTGCTACCTTTTTTTTTTTTCTCTACGGTTTCATATACACAGAAAATTTAATGAGTATGTGAAATAGTCATCCTCGAACTTTCCTTGTTGTTTCAGGAAAGTTTCAAGACAGGAGTACTTAAAGAAAAGGGAGGAGAAGAAACTGGAAGAAATCAGGTACAACGGTTTCACATTATGGCTTCTCATTCAGTTGGTACAGTTGTTTTTTTTATCTTTATTATTATTGTTCTTTTTTCATCTGAGTGCATGTTTCCATCTAAGGAATTGAAAAGACGTTACATAGTTCTCTCGATTAATTTTGTTTTTCCATAATTGTGATGTCATTTCCTTTCTCTCTCTCTGTTCGTCTTATCATTTCTTTGGTTTCTCAAATTTCCTGATGATCAATAACAGAGATGATATAGAAGATGAGCAATATCTTTTTGACGGTGTGAAGCTTACTGAAGTAGAATATCGGGAGCTAAGGCAAGAGTTTCTTTATTTCTTTTCCTTCCTTTTTTCGTCTTGGTAATAGTTTAGTTCTATCTGCCTAATTTCATTGTATTCAACTGACTTGTTCATTAGTTCCCATTCACTTTGGATTTTTAAATATCTAGTTTCTCGTATGTCTCGTAGAGTATTTTCACTTTCTTATCTAAAAACAATGGGCTTTGGTGGAATAAATCTATGAAAATGAAACCTTGTGAAATATTTTGTTTGTTGTTTCCAGGTATAAGAAAGAAATATATGAGCTTGTGAAGAAGCGGATAGACGAGGCTGATGAAATCAATGAGGTTATATCTTTGATCTTTCTATGTTTGTTGTTTTTGTTATTCTTTCTCTCTCTCTCTCTCTCTTCTTTTCTTTTAATATGTCCAATGAGTACTTAAAAGATAAATTAAAATTCCTAGTGTACGATATGATGAACTAAAAATTTTTGGAAAGCTAAGTTTCATATGCAGCTCAGACATTTTCTTTTATTTTTTTCTCTCTTCCATGAGAGTAGGGGAGAGGAATGGCCTATCTGCAAGGGTTGAAAGAAAAAGGTTTGTGTTTAAGTTGTGTGATTTGGTAGAGAAGGTGGAGGTTTGAGAGTTTTGTGGAGGAAAATCGTCGAAAGTCAAGCTCCTTTTGGGGAATGTAGCGTGGGTTTGAGACTGTTTAAAGGATATAGATCCTGCTCCAACTTTAGATATTTCTTTAGGAAGAGAAAGTGTCCTGAAGGGTTAATCTGGGCTCAGTTGGTTGTGAACGCTAGAGGAAGATGTTGTGTAGTGGTGGTGGAACAGCTGAAGGGGAGGAGTTTCACCTTATTCATTTCTGTGGGAACAGAGGTTAAGGCTGGTGTTCGGTGGGAGATGCTTTGAGTAACTTGCTTTAGAGAGGTCTGGTGAAAGGTAAGGGTGTCTGTTTAAAGCCCCTGTCCTTTAGTTTGAATCCCTAGAAAGGTTGACGTTGTCCTTCGCTTGATTGGGAAAAGAAGGCAAAAAGTACAAGGTGTTAGAGGTTAAGAGTGAGGAAGAAAAGGATGTGCTGCTCGAAGTTTTGGATTCTGTTCTTTTAGTTAAGGAAAAGGGTTCTGATTTGTGGGCTAAGGTGAAGAAAGGCATTAAGTGTCGGTTTGATTTGAATATCCGTGTGAGACCCTTTTGTGGAAATTTGGCAGTGATCCTTTGTGAGGACAATGTTAAATGACTAGAGATGTTTGGTTACGGAAGAGGGATGATTCTTGACTGTGTCTCGAATTTCTTGTCATGGAACTCCGTGAAGGTGGTGGAGGAAAGGCATGTGCCATTTACCAAGGGGTGGGTGAAATTCTTGGATTTTCTTCCTCATTTATGAACAATGAGCATCATTTCAAAGCTAGTTGACTGGTGGATACGTTCTTTCAGTTTACCTGTTGTGACTAGTGAGAATTCATTCTAATAGCTCGTGTGTGAACCATTCTTTATTCTCCATTTTCTTATTTTCCTTCTCAGTTGAAAAGAAACATATTGAATGTCTGAAAGATGAATTTATTCCTTCTCTTTTCAATCTTTTTTCATGATAGAACACTCTGTTTTTTTACAATAAAACAATGATTTTTTTTGCTTCTATGATACATTTTATTTATTGATTAATTACATATGTCATGTTTTGCTTTATTGGAGTGCAGTACAGGATGCCTGAAGCTTATGATCAGGAAGGAGGTGTTAATCAGGATAAGAGGTTTGCAGTGGCAATGCAGCGGTATAGGTTAGTTGAACCCTCAATAAATTGAACTCTCAATAACGGAAACCGAGAATCCTTCCAAATGAGCTTTTGAGTTATTATTATTCTTACAGGGATTCAGGTGCTGCAGATAAAATGAACCCATTTGCAGAACAAGAGGCATGGGAGGAACACCAAATAGGTAAGTCCCACTTCTCTGAGGTTCTTTTGATGTTCTTTCTTCAGATGATGAAACAATTATTTTTCAGGGAAAGCATCAATGAAATTTGGTTCCAAAAATAAGAAGCAAGCCGATGATTATCAGTAAGTATCTTATGGTTCTGAATTATTACTTTTACGTTTATGATGTTTATTTAGTATATTTTGTTATTACTACTTTCATAGGTTGTATTTTAATGTTCATTAATGATACAAGGCGGTTGTCATCTTCTATTTGGAACATATAATATCTTCCATTACCTTTTATTCAAGAATTTTTTATTTTAATTTATTTATTTATCCTTCATTGCTGGCCATTATATTACAGGAAATGAACATCTCCTGATTTTTCTTTGTTTTTGTTTTTTGTGTTGTTTTGTTTTAGGTTTGTATTTGAGGATCAGATTGAGTTTATTAAGGCTTCAGTTATGGAAGGTGATGAGGTGTGGCTTAAACTTTCTATAGTTATTTTATGCAGTTGTGGTAATGTAGTAAAAATCATTTTTATTTCATGCTACCTTTGCTCGTTTTTGGCAGTTTGTTGATGAACATCAGATTGAATCACTTGAAAAGTCCAAAGCTAAGTCAGCTCTGGAGAAGCTGCAGGTTTTGGTTCTGATTACGCTTTTATTGCACAAGTTTATATTCATATGGACAGAAAATTTAATATTGATCATAATTAGGTCTTACTACTAACAGATTAATATTATGGTTCTAAGATTTTGTTTTGATTTGTTTTTTTGTGCCTAGGAAGAGAGAAAAACATTGCCAATTTATCCATATCGTGATCAGTTACTCCAAGCTGTAAATGATTATCAGGTGGGTTTCTTTTTTTGGGTGGATGAGTATTGCATTCTGCTCAAACATTGTCAAATATATGTTCACCACTGATCTCACACACACACAAAAAAAAAAAAAAAACAAAAGGGTTCACGAGGGGAGATTAGGGGTTTTATACTAACTTTGGGAGCTCTCCGACTCTAACAAAAGAATACGACGATCACCCACACTTTTAGATATAAGAAGCCATTATTGATCCACTTGCTGTCAAAGCTCATCAAGTTTCATCCTATGTCAATTCCCTATATCTAACAGTCCCATTATTCCTTCTGTAGTAGCAAAATTGCAAACACTACATAGAAACATTTTTTGCTGAGATGGATAATGGAAGTTAGAGTGACAAATTTTCAACTTAGGAAGGAGTAATTGAAAATTCTTTTGAAACCTCCTAGCCAAGTGGTGTGAACCCACAGATGTTATCAAAATGTTCACTTGTTTGTTGGCAAGGATGCACATCGTGGGTGTCCTTTTTAAATCCTTTTTACCGTTTTCAAACTAAGCATTAAGGAGCAGACAAATAACTGAGATTTTCTAGGCATCTTTGAGTATCTGATTATCATTTTGACAAGTTCTGCATGCATGTACAAAATTTTATGGTAACAACTGATTTTCTGCTTTTATAGGTTCTTGTAATTGTCGGTGAAACTGGTTCGGGAAAAACCACACAGATTCCTCAATATCTTCATGAAGCTGGGTACACAAAGCGAGGAAAAGTATGACCTTCTATACTCCCATATTAACTTTTATTTGTTGTGCTTAGTGGAGCTTGGAGGGTTTGGATAAATTTTTGTAGGAATTCTTACATTATTCTGTTATTGATTAATGGTTGCTATAAATTATGGTCAATGATTTCTATTTCCTCTTCTAGTTTTGATTTAGGAGTCGGTTGCAAATTGTAGTGAGAAAAAAAATGCTGCACGAACTTGTAATTAGCCATCAAGTGAATGATTTTTCAGTCTTCCTGTTTCCCTGAGATGTAAAATCCAGTTTCTTGCTATCTTCTTAAGGTTGGATGCACACAACCGCGTCGAGTTGCTGCTATGAGCATTGCTGCCCGAGTATCTCAAGAACTGGGTGTCAAGCTTGGCCATGAGGTGACATTGCCAAGACTTTTAAACTAAATCCTTCTCCCTTCTTCAAATTATTTTGATACTATGGTGTATCTTATCACATGATTTGCTTTACATCATACTCGCATTAGCTTGTTTATTTTGTTGTTTTAAAGATGGGACAAACAACTTTTTTCCGTTCTTTGCATTTCCTAAATTTCGTTTCAAATTTATGCAACCTATCTTCGGTCTGTTGTTTCATCCTTGTATTGGTATCTAATGAATATAACGTGGTATTTGTTACATGTACTTAAATACTTCATTTGAATTCCGTGAATGTATTTCTCTTTGCACTCATCTCTTCCTAATAACTTTAGGTTGGTTATTCAATACGTTTTGAGGATTGCACGTCAGATAAGACTATTTTGAAGTACATGACAGATGGGATGTTGTTACGAGAATTCCTTGGCGAACCTGACCTTGCAGGCTACAGGTGCACCGTACTGCATGTTTGATGTTCATTCGTACTCCAAGTTAATTAGCCTGTTTTCTAACTCTATTTGCAATATTCTTGAAAAATTTTCTTTTAGTGTTATAATGGTGGACGAGGCTCATGAAAGAACATTATCAACTGATGTCCTGTTTGGGTTAGTGAAGGTGAGTTGGAGCTCCAACTACAGTTTTATTTTATGTATGATGCAATTTATGTTATGTTTATTTGTATCTTGCTTCTTTCAGTTTGCTATATTATTTTTGATTTTTTCTCCTTTTCCAAATATGTTTTTTTCCTATTAGGATATTGCAAGGTTTCGACCTGAGTTGAAATTGCTAATTTCAAGTGCAACACTTGATGCGGAGAAGTTCAGTGATTACTTTGATTCAGCTCCAATATTTAAAATTCCTGGTAGACGATATCCTGTAGAAATTAACTTCACAAAAGCTCCAGAAGCGGACTATTTAGATGCAGCAATTGTGACTGCGCTTCAGATTCATGTCACAAAGCCTCCAGGAGATATATTGGTGTTTCTCACTGGTCAAGAAGAGATTGAAGCAGCTGAGGAAATAATGAAACATAGAACTCGAGGACTAGGCACAAAAATTGCCGAACTCATTATCTGCCCCATATATGCCAACTTACCAACAGAGCTACAGGCTAAGATATTTGAACCCACACCCATAGGAGCAAGGAAAGTTGTCCTGGCAACTAATATAGCAGAGACATCATTAACGATTGATGGAATAAAATATGTTATTGATCCTGGCTTTTCAAAAATAAAATCCTATAATCCAAGGACTGGGATGGAGTCGTTGCAAGTGAGTCCCATTTCTAAAGCATCAGCAAACCAAAGAGCAGGCCGTTCTGGACGAACAGGTCCTGGAATGTGCTTTCGTTTGTATACTGCTTATAGTTATTATAATGAGATGGAAGACAATACAGTTCCAGAAATTCAAAGAACAAACCTTGCTAATGTCGTGCTTACACTTAAGAGCCTTGGTATTCATGACTTGGTAAATTTTGATTTTATGGACCAACCTCCATCTGAAGCACTGCTAAAAGCTTTGGAACTGCTCTATGCACTTGGTGCTTTAAATAAACTGGGCGAACTGACTAAGATGGGCAGGCGGATGGCTGAGTTTCCTCTTGATCCCATGCTTTCCAAGATGATGGTTGCTTCTGAGAAGCACAAGTGTTCAGATGAGATTATTTCTATTGCAGCTATGCTTTCTATTGGAAATTCTATCTTTTATCGCCCGAAGGATAAACAAGTTCATGCTGACAATGCTCGAATGAATTTTCACACTGGGAATGTGGGGGATCACATTGCATTGCTGAAGGTTTCATTTCTCTGGCAGCTAATCCTATTATTTTTTTACCTTCTAAAGCTCACATTTTTAATTTATCTATTTCTTAATATTTTCTTGTTTAACTTTTTTTTTTTTAAAAAAAAACATGAAAGCATTATTTATTGTTAATAATCTTTTTTTTTTTTCTTTTGTTGGGCCTTTTCTCATAGGCGACACCATTTATTTTTTTGGCATATAGTTTTTTAACTTGGTTTTAAATAAATTAGGTATTAAAAAATTGATTAAATTATAAATTTGGTCCACCTGGTTTGAAGAAAATTAGAATTTAGTCCCTATGATTTTAAAAGTTCGATTTCGTCAATAGGGACCAAATTTATAATTTAACCTAAAAAGTTTTAGGTCCAAATTGCTGAGTATAAACTGTTATTTGCTTCTTTATTTATGTATTATTTAGGTCTACAACTCTTGGAGGGAAACAAATTACTCTACGCAATGGTGCTATGAGAACTACATCCAGGTTCGCTTGGCTAATCTTTAGCTCATTAGGGATTTATATTTTTTTTTGAGGAATATATATGTTCATTTCTATTTGGCAGATCTGATATATTGTTATGTGTTTGCTAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTTGAAGGGCTATTAGAAAGGGTTGAAATTGAACTGACTTCAAATTTGAATGACTTGGATGCAATAAAGAAGACCATAATATCTGGTAAATGAAAATTTATCCCTTATTTTGGTAATCTGAATTCTGTAAAGCCGTTCTTTTCATTTTAGTGGTGTAAACTATCTTGAATTCTTGCATGAAACAGCTTAATAGAAGTTGTGAAACATGAAATGTGACGATAATAATGAGGAAATACAAGATATACGATGTTATAAATGATTGATACTGTTTGGTTCCCCATTAAATAAGCAGCGGGCTGAAAACTTATTGACTTAATAAATGTAATGCTATGGATTAGTTGACACCTTTGGACAGAGATGGAGACAGCTTTTCATGTACCGAGAAGAAGAGGAATCTGGGGTATTATTAGATTGATTTGCTTGGAACTTGTTTAGCTTCAAGTTTGCAATGAAATTTGGGTTTTTGGCAATTTAGATTTTAAATTTTGAAATGTAGCTGCAGTTTTCAAAGATGTAAAGCTACGAACAATACTGCATCGTAGTTGGGTTTACACATGGCCTGCAGCTTTACTATACTTAGTATTTTATGACTTAACTAGATCTGTGGATGCCTCCTATGATGTTACAATAAGTCTTGAAGATTGCGGGAAATTGAAATACCTATTTTTCCTCTGTAGAATCGGATGTACTTGATCTGGTAAGGTTTCATATCAAGGAGTTTTCCCGTGGATTAATGTGGATGTTAGTTATAGAAATTTAATTATGTGGTCTTCTGTTGGGAGTTTTTCGAGAAACCATTGGAGTTCATCTCCATTCATTTGAAATTATTTGTCCATCTAGATATTGTTGAAATGGAGCTGTGTTGATACTTAGAGCATTTTACTAATGTTTGAAAGAATGTTCTTTTTCTCTGTTTGATTCTGCAGTCTTATTGATTAAAGTTGTTTTCCAGGTTTTTTCCCTCACTCTGCAAAGTTACAAAAGAATGGCTCGTATCGGACCATTAAGCATCCACAGACAGTTCATATACATCCAAGCTCAGGGTTGGCTCAGGTAAGTTTTCACCCACAACTTCGAGATAATTTATTGCTGCCTGTTGGAATGTTCCTTGATTTTTTTTTTTGGGCTTTGGAAAGAGGTATTTTTTTTAGGAGCTATCAGTTATAACTACTTAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAAAAAAAAAAAAAAAAAAAAAAAAAGACCGATCATTTTCATACTAAAATTGAAAATAAATTCTACAGTTTTTAATTTTTAATTTTTGGAATTTTTGGACTTGTTTGCAATAATTTGTCCTAAAGAAGAATAAATAAAAGTGAAAAAGAAATATAGTGCCCTGATTTTATAGGGGAACTACTAACTTTTATATGTTTTTCATTGTTTTGATTTTCCACCTCAGGTTCTTCCCAGATGGGCTGTGTACCATGAATTAGTATGTACCTCAAAGGAATATATGAGACAGGTGATACTTTTTTTTCCTTTTAATTATCCATTTTAAGTTCTTCATCCTTCCTTTCGACTTACATGTTATTAGTCAACTGTGTTATATATAGGTAACGGAATTGAAGCCCGAATGGTTGGTTGAAATTGCTCCACATTTCTATCAGCTTAAAGATGTCGAAGATTGTATGCTCCTTTTCCCTCTCTCCCTAAACTAAACATAAGATTATCTTTCAGAACACTCAAATATTTAGCAACATATTAATCAAAAAATGAGAGGCCAATATTTGAAATTCCCTTTCTAGTAGAAATGAAATACAACACTTGTTAGAGGACACGAAAGATAAAAGCTGTAGGCAATGTTTGATAACAATAATTTTCAAAAACATGAAACCAAAAACAAAGTAGTTATCAAATAAAAGGATATTAATTGAACATCTTTAAATTTCATAACCTGAGTTAATGAAGCTGTGTAAGTTTGAATTTGAAAGGAGACAAAACTTATAGATGTCCTAGTTATTGAATTATATTAAATAGTTGGATAGTTCTAGGTTGTATACTTCATGAGCTATGAATCTTTTTATCACGCGAAATTCTAAAAGTATAATAATTTTGTTTGATAGTGAGTCAAAAGAAGATGCCTCGCGGACAAGGTCGACCTGCAGAGAACTGAACTGTTCGATGGTTCCAACCCCACAAGGCAGAGACATCACAAGTAAGAAATTGTGCATGAAAGATAGAGCTTAGACAATCTTTCAAATGTTTCTTATGGGAGATTTGGTAGATAAACTCATCACCTTCTGGTCTGAACTCGGCCGACTATTAGTTAGCCTAGCTTATACCATATTTGTCAAGTATCGGATCGGATGTGTTCTTAGCTAGAATTTTGACACAACTTTGTGACTTGGTTCAGAGGCTCTATAGAAAATGTATTTGAAGATGAGTTAATTTTGTAGTGGCATTGCTAACTGTAATCGCTAATGTATGTAGAATATGTAGCTGAAGATGAGTTGGTTTTGTAGTTGCTCTGCTAACAACTGTAATTGTTAGTGTACATATTGTCATAGACTTGTGTCTTCTTTATATCTTAGCTTGGTAACTTATTTTTCTTTCTTTGGTTATTTTTGGGGTTTTGTGTATAATAGCATGCTTGGTTATCT

mRNA sequence

ATGTTCGTTCTTCTCCCGCTCTGGAGACTACGCGCGAACGACGTTCAGCTACAGAGGTTGCTCCAAGATCGTGTTTTGCGTGATTCTTCCATCAATCCTTCAGCACAGAGTTCGAACGCTGACAAGACGTCCGTTTGCGCGACGCCGAGCGTTCACCGGCGACCACGCGGCGGATTTGCGATCCTCCAAGTGTTTCTTCACGAAGATTCGCTTCTAGCCAGGGAGATGGGGGGAGAAAATGACATGAAAACGTGGATTTCTGATCAGTTAATGTCACTGCTTGGTTTCTCTCAGCCAACGATTGTACAGTATATGATTGGACTATCCAAACAAGCAGCATCACCTGCCGATGTAGTGAGCAAGTTGGTGGTGGATTTTGGCTTGCCATCTTCCAATGAAACATTGGCTTTTGCTGAAGGAATTTTCTCTAGAGTGCCACGCAAGAAATCAACTGGTTTAAATCTTTATCAGAAGCAAGAGAGAGAAGCTGCAATTTTAGCAAGAAATCAAAAAAAATACACACTACTCGATGCTGACGACGAAGAGGTTCTTGAAGATAAAGGAGGCAGTGGTGATCCCCGAGAAACAGAAAATCGCAAAAAACGCTTTAGAAAGAAAAACGAATATCAAGAAGATGAAGATGATGAGGAAGAAAGTGCTCTTGAAAGAGAAAATAGGCAGGTTAAAAGACGGACTTCCAGTTCTGAAGACGATGGCTCTGAGTCGGAGGAAGAGCGACAGCGTGATCAAAGAGAGAGGGAGCAATTAGAGCGAAATATAAGAGAACGTGATGCTGCTGGAACCAAAAAGTTAACAGAACAGAAATTGAGCAGGAAGGAGGAAGAAGAGGCAATTCGGAGATCCAAAGCTTTGGAGAATGATGGAACTGATACTTTGAGGAAAGTTTCAAGACAGGAGTACTTAAAGAAAAGGGAGGAGAAGAAACTGGAAGAAATCAGAGATGATATAGAAGATGAGCAATATCTTTTTGACGGTGTGAAGCTTACTGAAGTAGAATATCGGGAGCTAAGGTATAAGAAAGAAATATATGAGCTTGTGAAGAAGCGGATAGACGAGGCTGATGAAATCAATGAGTACAGGATGCCTGAAGCTTATGATCAGGAAGGAGGTGTTAATCAGGATAAGAGGTTTGCAGTGGCAATGCAGCGGTATAGGGATTCAGGTGCTGCAGATAAAATGAACCCATTTGCAGAACAAGAGGCATGGGAGGAACACCAAATAGGGAAAGCATCAATGAAATTTGGTTCCAAAAATAAGAAGCAAGCCGATGATTATCAGTTTGTATTTGAGGATCAGATTGAGTTTATTAAGGCTTCAGTTATGGAAGGTGATGAGTTTGTTGATGAACATCAGATTGAATCACTTGAAAAGTCCAAAGCTAAGTCAGCTCTGGAGAAGCTGCAGGAAGAGAGAAAAACATTGCCAATTTATCCATATCGTGATCAGTTACTCCAAGCTGTAAATGATTATCAGGTTCTTGTAATTGTCGGTGAAACTGGTTCGGGAAAAACCACACAGATTCCTCAATATCTTCATGAAGCTGGGTACACAAAGCGAGGAAAAGTTGGATGCACACAACCGCGTCGAGTTGCTGCTATGAGCATTGCTGCCCGAGTATCTCAAGAACTGGGTGTCAAGCTTGGCCATGAGGTTGGTTATTCAATACGTTTTGAGGATTGCACGTCAGATAAGACTATTTTGAAGTACATGACAGATGGGATGTTGTTACGAGAATTCCTTGGCGAACCTGACCTTGCAGGCTACAGTGTTATAATGGTGGACGAGGCTCATGAAAGAACATTATCAACTGATGTCCTGTTTGGGTTAGTGAAGGATATTGCAAGGTTTCGACCTGAGTTGAAATTGCTAATTTCAAGTGCAACACTTGATGCGGAGAAGTTCAGTGATTACTTTGATTCAGCTCCAATATTTAAAATTCCTGGTAGACGATATCCTGTAGAAATTAACTTCACAAAAGCTCCAGAAGCGGACTATTTAGATGCAGCAATTGTGACTGCGCTTCAGATTCATGTCACAAAGCCTCCAGGAGATATATTGGTGTTTCTCACTGGTCAAGAAGAGATTGAAGCAGCTGAGGAAATAATGAAACATAGAACTCGAGGACTAGGCACAAAAATTGCCGAACTCATTATCTGCCCCATATATGCCAACTTACCAACAGAGCTACAGGCTAAGATATTTGAACCCACACCCATAGGAGCAAGGAAAGTTGTCCTGGCAACTAATATAGCAGAGACATCATTAACGATTGATGGAATAAAATATGTTATTGATCCTGGCTTTTCAAAAATAAAATCCTATAATCCAAGGACTGGGATGGAGTCGTTGCAAGTGAGTCCCATTTCTAAAGCATCAGCAAACCAAAGAGCAGGCCGTTCTGGACGAACAGGTCCTGGAATGTGCTTTCGTTTGTATACTGCTTATAGTTATTATAATGAGATGGAAGACAATACAGTTCCAGAAATTCAAAGAACAAACCTTGCTAATGTCGTGCTTACACTTAAGAGCCTTGGTATTCATGACTTGGTAAATTTTGATTTTATGGACCAACCTCCATCTGAAGCACTGCTAAAAGCTTTGGAACTGCTCTATGCACTTGGTGCTTTAAATAAACTGGGCGAACTGACTAAGATGGGCAGGCGGATGGCTGAGTTTCCTCTTGATCCCATGCTTTCCAAGATGATGGTTGCTTCTGAGAAGCACAAGTGTTCAGATGAGATTATTTCTATTGCAGCTATGCTTTCTATTGGAAATTCTATCTTTTATCGCCCGAAGGATAAACAAGTTCATGCTGACAATGCTCGAATGAATTTTCACACTGGGAATGTGGGGGATCACATTGCATTGCTGAAGGTCTACAACTCTTGGAGGGAAACAAATTACTCTACGCAATGGTGCTATGAGAACTACATCCAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTTGAAGGGCTATTAGAAAGGGTTGAAATTGAACTGACTTCAAATTTGAATGACTTGGATGCAATAAAGAAGACCATAATATCTGGTTTTTTCCCTCACTCTGCAAAGTTACAAAAGAATGGCTCGTATCGGACCATTAAGCATCCACAGACAGTTCATATACATCCAAGCTCAGGGTTGGCTCAGGTTCTTCCCAGATGGGCTGTGTACCATGAATTAGTATGTACCTCAAAGGAATATATGAGACAGGTAACGGAATTGAAGCCCGAATGGTTGGTTGAAATTGCTCCACATTTCTATCAGCTTAAAGATGTCGAAGATTTGAGTCAAAAGAAGATGCCTCGCGGACAAGGTCGACCTGCAGAGAACTGAACTGTTCGATGGTTCCAACCCCACAAGGCAGAGACATCACAAGTAAGAAATTGTGCATGAAAGATAGAGCTTAGACAATCTTTCAAATGTTTCTTATGGGAGATTTGGTAGATAAACTCATCACCTTCTGGTCTGAACTCGGCCGACTATTAGTTAGCCTAGCTTATACCATATTTGTCAAGTATCGGATCGGATGTGTTCTTAGCTAGAATTTTGACACAACTTTGTGACTTGGTTCAGAGGCTCTATAGAAAATGTATTTGAAGATGAGTTAATTTTGTAGTGGCATTGCTAACTGTAATCGCTAATGTATGTAGAATATGTAGCTGAAGATGAGTTGGTTTTGTAGTTGCTCTGCTAACAACTGTAATTGTTAGTGTACATATTGTCATAGACTTGTGTCTTCTTTATATCTTAGCTTGGTAACTTATTTTTCTTTCTTTGGTTATTTTTGGGGTTTTGTGTATAATAGCATGCTTGGTTATCT

Coding sequence (CDS)

ATGTTCGTTCTTCTCCCGCTCTGGAGACTACGCGCGAACGACGTTCAGCTACAGAGGTTGCTCCAAGATCGTGTTTTGCGTGATTCTTCCATCAATCCTTCAGCACAGAGTTCGAACGCTGACAAGACGTCCGTTTGCGCGACGCCGAGCGTTCACCGGCGACCACGCGGCGGATTTGCGATCCTCCAAGTGTTTCTTCACGAAGATTCGCTTCTAGCCAGGGAGATGGGGGGAGAAAATGACATGAAAACGTGGATTTCTGATCAGTTAATGTCACTGCTTGGTTTCTCTCAGCCAACGATTGTACAGTATATGATTGGACTATCCAAACAAGCAGCATCACCTGCCGATGTAGTGAGCAAGTTGGTGGTGGATTTTGGCTTGCCATCTTCCAATGAAACATTGGCTTTTGCTGAAGGAATTTTCTCTAGAGTGCCACGCAAGAAATCAACTGGTTTAAATCTTTATCAGAAGCAAGAGAGAGAAGCTGCAATTTTAGCAAGAAATCAAAAAAAATACACACTACTCGATGCTGACGACGAAGAGGTTCTTGAAGATAAAGGAGGCAGTGGTGATCCCCGAGAAACAGAAAATCGCAAAAAACGCTTTAGAAAGAAAAACGAATATCAAGAAGATGAAGATGATGAGGAAGAAAGTGCTCTTGAAAGAGAAAATAGGCAGGTTAAAAGACGGACTTCCAGTTCTGAAGACGATGGCTCTGAGTCGGAGGAAGAGCGACAGCGTGATCAAAGAGAGAGGGAGCAATTAGAGCGAAATATAAGAGAACGTGATGCTGCTGGAACCAAAAAGTTAACAGAACAGAAATTGAGCAGGAAGGAGGAAGAAGAGGCAATTCGGAGATCCAAAGCTTTGGAGAATGATGGAACTGATACTTTGAGGAAAGTTTCAAGACAGGAGTACTTAAAGAAAAGGGAGGAGAAGAAACTGGAAGAAATCAGAGATGATATAGAAGATGAGCAATATCTTTTTGACGGTGTGAAGCTTACTGAAGTAGAATATCGGGAGCTAAGGTATAAGAAAGAAATATATGAGCTTGTGAAGAAGCGGATAGACGAGGCTGATGAAATCAATGAGTACAGGATGCCTGAAGCTTATGATCAGGAAGGAGGTGTTAATCAGGATAAGAGGTTTGCAGTGGCAATGCAGCGGTATAGGGATTCAGGTGCTGCAGATAAAATGAACCCATTTGCAGAACAAGAGGCATGGGAGGAACACCAAATAGGGAAAGCATCAATGAAATTTGGTTCCAAAAATAAGAAGCAAGCCGATGATTATCAGTTTGTATTTGAGGATCAGATTGAGTTTATTAAGGCTTCAGTTATGGAAGGTGATGAGTTTGTTGATGAACATCAGATTGAATCACTTGAAAAGTCCAAAGCTAAGTCAGCTCTGGAGAAGCTGCAGGAAGAGAGAAAAACATTGCCAATTTATCCATATCGTGATCAGTTACTCCAAGCTGTAAATGATTATCAGGTTCTTGTAATTGTCGGTGAAACTGGTTCGGGAAAAACCACACAGATTCCTCAATATCTTCATGAAGCTGGGTACACAAAGCGAGGAAAAGTTGGATGCACACAACCGCGTCGAGTTGCTGCTATGAGCATTGCTGCCCGAGTATCTCAAGAACTGGGTGTCAAGCTTGGCCATGAGGTTGGTTATTCAATACGTTTTGAGGATTGCACGTCAGATAAGACTATTTTGAAGTACATGACAGATGGGATGTTGTTACGAGAATTCCTTGGCGAACCTGACCTTGCAGGCTACAGTGTTATAATGGTGGACGAGGCTCATGAAAGAACATTATCAACTGATGTCCTGTTTGGGTTAGTGAAGGATATTGCAAGGTTTCGACCTGAGTTGAAATTGCTAATTTCAAGTGCAACACTTGATGCGGAGAAGTTCAGTGATTACTTTGATTCAGCTCCAATATTTAAAATTCCTGGTAGACGATATCCTGTAGAAATTAACTTCACAAAAGCTCCAGAAGCGGACTATTTAGATGCAGCAATTGTGACTGCGCTTCAGATTCATGTCACAAAGCCTCCAGGAGATATATTGGTGTTTCTCACTGGTCAAGAAGAGATTGAAGCAGCTGAGGAAATAATGAAACATAGAACTCGAGGACTAGGCACAAAAATTGCCGAACTCATTATCTGCCCCATATATGCCAACTTACCAACAGAGCTACAGGCTAAGATATTTGAACCCACACCCATAGGAGCAAGGAAAGTTGTCCTGGCAACTAATATAGCAGAGACATCATTAACGATTGATGGAATAAAATATGTTATTGATCCTGGCTTTTCAAAAATAAAATCCTATAATCCAAGGACTGGGATGGAGTCGTTGCAAGTGAGTCCCATTTCTAAAGCATCAGCAAACCAAAGAGCAGGCCGTTCTGGACGAACAGGTCCTGGAATGTGCTTTCGTTTGTATACTGCTTATAGTTATTATAATGAGATGGAAGACAATACAGTTCCAGAAATTCAAAGAACAAACCTTGCTAATGTCGTGCTTACACTTAAGAGCCTTGGTATTCATGACTTGGTAAATTTTGATTTTATGGACCAACCTCCATCTGAAGCACTGCTAAAAGCTTTGGAACTGCTCTATGCACTTGGTGCTTTAAATAAACTGGGCGAACTGACTAAGATGGGCAGGCGGATGGCTGAGTTTCCTCTTGATCCCATGCTTTCCAAGATGATGGTTGCTTCTGAGAAGCACAAGTGTTCAGATGAGATTATTTCTATTGCAGCTATGCTTTCTATTGGAAATTCTATCTTTTATCGCCCGAAGGATAAACAAGTTCATGCTGACAATGCTCGAATGAATTTTCACACTGGGAATGTGGGGGATCACATTGCATTGCTGAAGGTCTACAACTCTTGGAGGGAAACAAATTACTCTACGCAATGGTGCTATGAGAACTACATCCAGGTTAGAAGTATGAAACGTGCTAGAGATATCAGAGATCAACTTGAAGGGCTATTAGAAAGGGTTGAAATTGAACTGACTTCAAATTTGAATGACTTGGATGCAATAAAGAAGACCATAATATCTGGTTTTTTCCCTCACTCTGCAAAGTTACAAAAGAATGGCTCGTATCGGACCATTAAGCATCCACAGACAGTTCATATACATCCAAGCTCAGGGTTGGCTCAGGTTCTTCCCAGATGGGCTGTGTACCATGAATTAGTATGTACCTCAAAGGAATATATGAGACAGGTAACGGAATTGAAGCCCGAATGGTTGGTTGAAATTGCTCCACATTTCTATCAGCTTAAAGATGTCGAAGATTTGAGTCAAAAGAAGATGCCTCGCGGACAAGGTCGACCTGCAGAGAACTGA

Protein sequence

MFVLLPLWRLRANDVQLQRLLQDRVLRDSSINPSAQSSNADKTSVCATPSVHRRPRGGFAILQVFLHEDSLLAREMGGENDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAEGIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEEVLEDKGGSGDPRETENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSEDDGSESEEERQRDQREREQLERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSRQEYLKKREEKKLEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRIDEADEINEYRMPEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQADDYQFVFEDQIEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLFGLVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQKKMPRGQGRPAEN
Homology
BLAST of CmaCh11G001950 vs. ExPASy Swiss-Prot
Match: Q8VY00 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1)

HSP 1 Score: 1558.1 bits (4033), Expect = 0.0e+00
Identity = 790/1045 (75.60%), Postives = 927/1045 (88.71%), Query Frame = 0

Query: 80   NDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAE 139
            ND+KTW+SD+LM LLG+SQ  +V Y+I ++K+  SP ++V +L VD+G  SS +T +FAE
Sbjct: 4    NDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGEL-VDYGFSSSGDTRSFAE 63

Query: 140  GIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEE---VLEDKGGSGDPRET 199
             IF+RVPR K+ G+NLYQK E EAA+L R QK Y LLDADD+E   V+E K    + R++
Sbjct: 64   EIFARVPR-KTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSSVSESRKS 123

Query: 200  ENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSEDDGSESEEERQRDQREREQL 259
            +  KKRFRKK+  Q DE D  E A+  ++R V+R+  S EDDGSESEEER RDQ+ERE+L
Sbjct: 124  DKGKKRFRKKSG-QSDESD-GEVAVREDSRHVRRKV-SEEDDGSESEEERVRDQKEREEL 183

Query: 260  ERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSRQEYLKKREEKKL 319
            E+++++RD A T+KLTEQ LS+KE+EEA+RR+ ALE D   +LRKVSRQEYLKKRE+KKL
Sbjct: 184  EQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYLKKREQKKL 243

Query: 320  EEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRIDEADEINEYRMPEAYDQEG 379
            +E+RD+IEDEQYLF G KLTE E RE RYKKE+Y+LVKKR  + D + EYR+P+AYDQEG
Sbjct: 244  DELRDEIEDEQYLFGGEKLTETELREFRYKKELYDLVKKRTQDEDNVEEYRIPDAYDQEG 303

Query: 380  GVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQADDYQFVF 439
            GV+Q+KRF+VA+QRYRD  + +KMNPFAEQEAWE+HQIGKA++KFG+KNK+ +DDYQFVF
Sbjct: 304  GVDQEKRFSVAVQRYRDLDSTEKMNPFAEQEAWEDHQIGKATLKFGAKNKQASDDYQFVF 363

Query: 440  EDQIEFIKASVMEGDEFVDEHQIESLEKSKA-KSALEKLQEERKTLPIYPYRDQLLQAVN 499
            EDQI FIK SVM G+ + D    +   +  A K+ALE+LQE R++LPIY YRDQLL+AV 
Sbjct: 364  EDQINFIKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVE 423

Query: 500  DYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLG 559
            ++QVLVIVG+TGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMS+AARV+QE+GVKLG
Sbjct: 424  EHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLG 483

Query: 560  HEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLFG 619
            HEVGYSIRFEDCTSDKT+LKYMTDGMLLRE LGEPDLA YSV++VDEAHERTLSTD+LFG
Sbjct: 484  HEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFG 543

Query: 620  LVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDA 679
            LVKDIARFRP+LKLLISSAT+DAEKFSDYFD+APIF  PGRRYPVEIN+T APEADY+DA
Sbjct: 544  LVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDA 603

Query: 680  AIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTE 739
            AIVT L IHV +P GDILVF TGQEEIE AEEI+KHR RGLGTKI ELIICPIYANLP+E
Sbjct: 604  AIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSE 663

Query: 740  LQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPI 799
            LQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRTGMESL ++PI
Sbjct: 664  LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPI 723

Query: 800  SKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHD 859
            SKASA QRAGR+GRT PG C+RLYTA++Y N++E+NTVPE+QRTNLA+VVL LKSLGIHD
Sbjct: 724  SKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHD 783

Query: 860  LVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKH 919
            L+NFDFMD PP+EAL+K+LELL+ALGALNKLGELTK GRRMAEFPLDPMLSKM+V S+K+
Sbjct: 784  LINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKY 843

Query: 920  KCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNY 979
            KCSDEIISIAAMLSIG SIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVY+SW+ETN+
Sbjct: 844  KCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNF 903

Query: 980  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAK 1039
            STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SNLN+LD+++K+I++GFFPH+AK
Sbjct: 904  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAK 963

Query: 1040 LQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIA 1099
            LQKNGSYRT+KHPQTVHIHP+SGL+QVLPRW VYHELV TSKEYMRQVTELKPEWL+E+A
Sbjct: 964  LQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELA 1023

Query: 1100 PHFYQLKDVEDLSQKKMPRGQGRPA 1121
            PH+YQLKDVED + KKMP+G G+ A
Sbjct: 1024 PHYYQLKDVEDAASKKMPKGAGKAA 1043

BLAST of CmaCh11G001950 vs. ExPASy Swiss-Prot
Match: F4IJV4 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsis thaliana OX=3702 GN=MEE29 PE=2 SV=1)

HSP 1 Score: 1500.0 bits (3882), Expect = 0.0e+00
Identity = 761/1043 (72.96%), Postives = 900/1043 (86.29%), Query Frame = 0

Query: 78   GENDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAF 137
            G ND+ TW+SD+LM LLGFSQ  +VQY+I ++KQ+ SP ++V +L V+ G   S +T AF
Sbjct: 2    GSNDLNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVREL-VECGFSLSGDTRAF 61

Query: 138  AEGIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEEVLED--KGGSGDPRE 197
            AE I++R PR K+ G+NLYQ+QE EAA+L + QK ++LL+AD +E   +  K  +    +
Sbjct: 62   AEEIYARAPR-KTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDENNVKKQSASKTGK 121

Query: 198  TENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSEDDGSESEEERQRDQREREQ 257
            ++  +KRFRKK+E  ED+DDE     E + R V+R+ S  EDDG+ESEEER RDQRERE+
Sbjct: 122  SDKGQKRFRKKSEQLEDDDDEVVIVRE-DKRNVRRKVSEDEDDGTESEEERLRDQREREE 181

Query: 258  LERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSRQEYLKKREEKK 317
            LE+++RERD A T+KLTE K+S+KE+EE +RR  A++    ++LRK S QEY+KKR++KK
Sbjct: 182  LEQHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFSWQEYMKKRKQKK 241

Query: 318  LEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRIDEADEINEYRMPEAYDQE 377
            + E++DDIEDE YLF   KLTE E RE RYK+EIYEL+KK   E D + EYRMP+AYDQ+
Sbjct: 242  VLELKDDIEDEPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEYRMPDAYDQQ 301

Query: 378  GGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQADDYQFV 437
            G V+Q+KRFAV++QRYRD G+A+KMNPFAEQEAWE+HQI  A++KFG+KNK+ +D+Y+FV
Sbjct: 302  GSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKEVSDNYEFV 361

Query: 438  FEDQIEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVN 497
            FEDQI+FIKASV+ GD + DE   +  + S  KSA   LQE+RK LPIY YRDQLL AV 
Sbjct: 362  FEDQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVK 421

Query: 498  DYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLG 557
            D+QVL+IVGETGSGKTTQIPQYLHEAGYTK GKVGCTQPRRVAAMS+AARV+QE+G KLG
Sbjct: 422  DHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLG 481

Query: 558  HEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLFG 617
            HEVGYSIRFEDCTS+KTILKYMTDGMLLRE LGEPDL  YSVI+VDEAHERTL TD+LFG
Sbjct: 482  HEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFG 541

Query: 618  LVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDA 677
            LVKDIAR RP+LKLLISSAT+DAEKFSD+FD APIF+ PGRRYPV+I FT APEADY+DA
Sbjct: 542  LVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDA 601

Query: 678  AIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTE 737
            AI T L IHV +P GD+LVFL GQEEIEA EE +KH+ RGLGTKI ELIICPIYANLP+E
Sbjct: 602  AITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSE 661

Query: 738  LQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPI 797
            LQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRTGMESL V+PI
Sbjct: 662  LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPI 721

Query: 798  SKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHD 857
            SKASA QR GR+GRT PG C+RLYTA++YYN++EDNTVPEIQRTNLA+VVL+LKSLGIH+
Sbjct: 722  SKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHN 781

Query: 858  LVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKH 917
            L+NFDFMD PPSEAL+K+LELL+ALGALN+LGELTK GRRMAEFPLDPMLSKM+V S+K+
Sbjct: 782  LLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKY 841

Query: 918  KCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNY 977
            KCSDEIISIAAMLSIG SIFYRPKDKQVHADNA  NFH GNVGDHIA LK+YNSW+ETNY
Sbjct: 842  KCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNY 901

Query: 978  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAK 1037
            STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SN N+LD+I+K+I++GFFPH+AK
Sbjct: 902  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAK 961

Query: 1038 LQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIA 1097
            LQKNGSYRT+KHPQTVHIHP+SGL+QVLPRW VYH+LV TSKEYMRQVTELKPEWL+EIA
Sbjct: 962  LQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIA 1021

Query: 1098 PHFYQLKDVEDLSQKKMPRGQGR 1119
            PH+YQLKDVED + KKMP+  GR
Sbjct: 1022 PHYYQLKDVEDATSKKMPKTSGR 1041

BLAST of CmaCh11G001950 vs. ExPASy Swiss-Prot
Match: Q767K6 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 GN=DHX16 PE=3 SV=1)

HSP 1 Score: 1051.6 bits (2718), Expect = 6.3e-306
Identity = 570/1057 (53.93%), Postives = 769/1057 (72.75%), Query Frame = 0

Query: 82   MKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAEGI 141
            ++ W+ D+L S+LG S+  + Q++IG +++ AS  + V +L     L  S     FA  +
Sbjct: 7    LERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPARDFALKL 66

Query: 142  FSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEEVLEDKGGSGDPRETENRKK 201
            +++VPR K+      +  EREA  L    + Y LL+  +E   E  G +G   + + +K+
Sbjct: 67   WNKVPR-KAVAEKPARAAEREARALLEKNRSYRLLEDSEESSEEAVGRAGSSLQKKRKKR 126

Query: 202  RFRKKNEYQEDEDDEEESALERENR-----QVKRRTSSSEDDGSESEEERQRDQREREQL 261
            +  +K   +E+E++EEE   E+  +     + +     SED+   +E ER +D  ER+  
Sbjct: 127  KHLRKKRQEEEEEEEEEEVPEKGKKTTGGNKPQTEKPESEDEWERTERERLQDLEERDAF 186

Query: 262  ERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDG---TDTLRKVSRQEYLKKREE 321
               +R+RD   T+ + E+   +K  EEA +R K  E D       LRK SR+EYL KRE 
Sbjct: 187  AERVRQRDKDRTRNVLERS-DKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKRER 246

Query: 322  KKLEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKK-----RIDEADEINEYRM 381
            +KLE++  ++ DE++LF  V+L+  E REL+YK+ + +L ++       ++ +  N Y M
Sbjct: 247  EKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNRYHM 306

Query: 382  PEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKN-KK 441
            PE  +  G   Q  R    ++   +SGA     P  EQ  WEE ++G AS+KFG+++   
Sbjct: 307  PE--ETRG---QPTRAVDLVE--EESGA-----PGEEQRRWEEARLGAASLKFGARDAAS 366

Query: 442  QADDYQFVFEDQ--IEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYP 501
            Q   YQ V E++  IEF++A+ ++GDE        +  + K     E +Q  R++LP++P
Sbjct: 367  QEPKYQLVLEEEETIEFVRATQLQGDEEPAAPPAPTQAQQK-----ESIQAVRRSLPVFP 426

Query: 502  YRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRG-KVGCTQPRRVAAMSIAA 561
            +R++LL AV ++Q+L+I GETGSGKTTQIPQYL E GYT++G K+ CTQPRRVAAMS+AA
Sbjct: 427  FREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVAAMSVAA 486

Query: 562  RVSQELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAH 621
            RV++E+GVKLG+EVGYSIRFEDCTS++T+L+YMTDGMLLREFL EPDLA YSV+MVDEAH
Sbjct: 487  RVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAH 546

Query: 622  ERTLSTDVLFGLVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINF 681
            ERTL TD+LFGL+KD+ARFRPELK+L++SATLD  +FS +FD AP+F+IPGRR+PV+I +
Sbjct: 547  ERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFY 606

Query: 682  TKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELI 741
            TKAPEADYL+A +V+ LQIHVT+PPGDILVFLTGQEEIEAA E+++ R R LG+KI EL+
Sbjct: 607  TKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELL 666

Query: 742  ICPIYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPR 801
            + PIYANLP+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNPR
Sbjct: 667  VLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPR 726

Query: 802  TGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANV 861
            TGMESL V+P SKASANQRAGR+GR   G CFRLYTA++Y +E+E+ TVPEIQRT+L NV
Sbjct: 727  TGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNV 786

Query: 862  VLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPM 921
            VL LKSLGIHDL++FDF+D PP E LL ALE LYALGALN LGELT  GR+MAE P+DPM
Sbjct: 787  VLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPM 846

Query: 922  LSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALL 981
            LSKM++ASEK+ CS+EI+++AAMLS+ NSIFYRPKDK VHADNAR+NF     GDH+ LL
Sbjct: 847  LSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLL 906

Query: 982  KVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKT 1041
             VY  W E+ YS+QWCYEN++Q RSM+RARD+R+QLEGLLERVE+ L+S   D   ++K 
Sbjct: 907  NVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKA 966

Query: 1042 IISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVT 1101
            I +G+F H+A+L ++G YRT+K  QTV IHP+S L +  PRW +YHELV T+KE+MRQV 
Sbjct: 967  ITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVL 1026

Query: 1102 ELKPEWLVEIAPHFYQLKDVEDLSQKKMPRGQGRPAE 1122
            E++  WL+E+APH+Y+ K++ED   KKMP+  G+  E
Sbjct: 1027 EIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTRE 1042

BLAST of CmaCh11G001950 vs. ExPASy Swiss-Prot
Match: O60231 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens OX=9606 GN=DHX16 PE=1 SV=2)

HSP 1 Score: 1042.0 bits (2693), Expect = 5.0e-303
Identity = 566/1053 (53.75%), Postives = 763/1053 (72.46%), Query Frame = 0

Query: 82   MKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAEGI 141
            ++ W+ D+L S+LG S+  + Q++IG +++  S  + V +L     L  S     FA  +
Sbjct: 7    LERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRDTDTLDLSGPARDFALRL 66

Query: 142  FSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEEVLEDKGGSGDPRETENRK- 201
            +++VPR K+      +  EREA  L    + Y LL+  +E   E    +G   + + +K 
Sbjct: 67   WNKVPR-KAVVEKPARAAEREARALLEKNRSYRLLEDSEESSEETVSRAGSSLQKKRKKR 126

Query: 202  KRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSEDDGSESEEERQRDQREREQLERNI 261
            K  RKK E +E+E+  E+   +    + +     SED+   +E ER +D  ER+     +
Sbjct: 127  KHLRKKREEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLEERDAFAERV 186

Query: 262  RERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDG---TDTLRKVSRQEYLKKREEKKLE 321
            R+RD   T+ + E+   +K  EEA +R K  E D       LRK SR+EYL KRE +KLE
Sbjct: 187  RQRDKDRTRNVLERS-DKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKREREKLE 246

Query: 322  EIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKK-----RIDEADEINEYRMPEAY 381
            ++  ++ DE++LF  V+L+  E +EL+YK+ + +L ++       ++ +  N Y MP+  
Sbjct: 247  DLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKLEATNRYHMPK-- 306

Query: 382  DQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKN-KKQADD 441
            +  G   Q  R    ++   +SGA     P  EQ  WEE ++G AS+KFG+++   Q   
Sbjct: 307  ETRG---QPARAVDLVE--EESGA-----PGEEQRRWEEARLGAASLKFGARDAASQEPK 366

Query: 442  YQFVFEDQ--IEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYPYRDQ 501
            YQ V E++  IEF++A+ ++GDE        +  + K     E +Q  R++LP++P+R++
Sbjct: 367  YQLVLEEEETIEFVRATQLQGDEEPSAPPTSTQAQQK-----ESIQAVRRSLPVFPFREE 426

Query: 502  LLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRG-KVGCTQPRRVAAMSIAARVSQ 561
            LL A+ ++QVL+I GETGSGKTTQIPQYL E GYT +G K+ CTQPRRVAAMS+AARV++
Sbjct: 427  LLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAR 486

Query: 562  ELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTL 621
            E+GVKLG+EVGYSIRFEDCTS++T+L+YMTDGMLLREFL EPDLA YSV+MVDEAHERTL
Sbjct: 487  EMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTL 546

Query: 622  STDVLFGLVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAP 681
             TD+LFGL+KD+ARFRPELK+L++SAT+D  +FS +FD AP+F+IPGRR+PV+I +TKAP
Sbjct: 547  HTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAP 606

Query: 682  EADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPI 741
            EADYL+A +V+ LQIHVT+PPGDILVFLTGQEEIEAA E+++ R R LG+KI EL++ PI
Sbjct: 607  EADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 666

Query: 742  YANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGME 801
            YANLP+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNPRTGME
Sbjct: 667  YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 726

Query: 802  SLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTL 861
            SL V+P SKASANQRAGR+GR   G CFRLYTA++Y +E+E+ TVPEIQRT+L NVVL L
Sbjct: 727  SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 786

Query: 862  KSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKM 921
            KSLGIHDL++FDF+D PP E LL ALE LYALGALN LGELT  GR+MAE P+DPMLSKM
Sbjct: 787  KSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKM 846

Query: 922  MVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYN 981
            ++ASEK+ CS+EI+++AAMLS+ NSIFYRPKDK VHADNAR+NF     GDH+ LL VY 
Sbjct: 847  ILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLLNVYT 906

Query: 982  SWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISG 1041
             W E+ YS+QWCYEN++Q RSM+RARD+R+QLEGLLERVE+ L+S   D   ++K I +G
Sbjct: 907  QWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAG 966

Query: 1042 FFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKP 1101
            +F H+A+L ++G YRT+K  QTV IHP+S L +  PRW +YHELV T+KE+MRQV E++ 
Sbjct: 967  YFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIES 1026

Query: 1102 EWLVEIAPHFYQLKDVEDLSQKKMPRGQGRPAE 1122
             WL+E+APH+Y+ K++ED   KKMP+  G+  E
Sbjct: 1027 SWLLEVAPHYYKAKELEDPHAKKMPKKIGKTRE 1038

BLAST of CmaCh11G001950 vs. ExPASy Swiss-Prot
Match: Q7YR39 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Pan troglodytes OX=9598 GN=DHX16 PE=3 SV=1)

HSP 1 Score: 1042.0 bits (2693), Expect = 5.0e-303
Identity = 570/1057 (53.93%), Postives = 769/1057 (72.75%), Query Frame = 0

Query: 82   MKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAEGI 141
            ++ W+ D+L S+LG S+  + Q++IG +++  S  + V +L     L  S     FA  +
Sbjct: 7    LERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRDTDTLDLSGPARDFALRL 66

Query: 142  FSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEEVLEDKGGSGDPRETENRKK 201
            +++VPR K+      +  EREA  L    + Y LL+ D EE  E+          + RKK
Sbjct: 67   WNKVPR-KAVVEKPARAAEREARALLEKNRSYRLLE-DSEESSEETVSRAGSSLQKKRKK 126

Query: 202  RFRKKNEYQEDEDDEEESALERENRQV---KRRTS--SSEDDGSESEEERQRDQREREQL 261
            R   + + +E+E++EEE A E+  ++    K++T    SED+   +E ER +D  ER+  
Sbjct: 127  RKHLRKKREEEEEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLEERDAF 186

Query: 262  ERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDG---TDTLRKVSRQEYLKKREE 321
               +R+RD   T+ + E+   +K  EEA +R K  E D       LRK SR+EYL KRE 
Sbjct: 187  AERVRQRDKDRTRNVLERS-DKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKRER 246

Query: 322  KKLEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKK-----RIDEADEINEYRM 381
            +KLE++  ++ DE++LF  V+L+  E +EL+YK+ + +L ++       ++ +  N Y M
Sbjct: 247  EKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKLEATNRYHM 306

Query: 382  PEAYDQEGGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKN-KK 441
            P+  +  G   Q  R    ++   +SGA     P  EQ  WEE ++G AS+KFG+++   
Sbjct: 307  PK--ETRG---QPARAVDLVE--EESGA-----PGEEQRRWEEARLGAASLKFGARDAAS 366

Query: 442  QADDYQFVFEDQ--IEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYP 501
            Q   YQ V E++  IEF++A+ ++G+E        +  + K     E +Q  R++LP++P
Sbjct: 367  QEPKYQLVLEEEETIEFVRATQLQGNEEPSAPPTSTQAQQK-----ESIQAVRRSLPVFP 426

Query: 502  YRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRG-KVGCTQPRRVAAMSIAA 561
            +R++LL A+ ++QVL+I GETGSGKTTQIPQYL E GYT +G K+ CTQPRRVAAMS+AA
Sbjct: 427  FREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAA 486

Query: 562  RVSQELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAH 621
            RV++E+GVKLG+EVGYSIRFEDCTS++T+L+YMTDGMLLREFL EPDLA YSV+MVDEAH
Sbjct: 487  RVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAH 546

Query: 622  ERTLSTDVLFGLVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINF 681
            ERTL TD+LFGL+KD+ARFRPELK+L++SAT+D  +FS +FD AP+F+IPGRR+PV+I +
Sbjct: 547  ERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFY 606

Query: 682  TKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELI 741
            TKAPEADYL+A +V+ LQIHVT+PPGDILVFLTGQEEIEAA E+++ R R LG+KI EL+
Sbjct: 607  TKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELL 666

Query: 742  ICPIYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPR 801
            + PIYANLP+++QA+IF+PTP GARKVV+ATNIAETSLTI+GI YV+DPGF K KSYNPR
Sbjct: 667  VLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPR 726

Query: 802  TGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANV 861
            TGMESL V+P SKASANQRAGR+GR   G CFRLYTA++Y +E+E+ TVPEIQRT+L NV
Sbjct: 727  TGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNV 786

Query: 862  VLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPM 921
            VL LKSLGIHDL++FDF+D PP E LL ALE LYALGALN LGELT  GR+MAE P+DPM
Sbjct: 787  VLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPM 846

Query: 922  LSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALL 981
            LSKM++ASEK+ CS+EI+++AAMLS+ NSIFYRPKDK VHADNAR+NF     GDH+ LL
Sbjct: 847  LSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVLL 906

Query: 982  KVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKT 1041
             VY  W E+ YS+QWCYEN++Q RSM+RARD+R+QLEGLLERVE+ L+S   D   ++K 
Sbjct: 907  NVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKA 966

Query: 1042 IISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVT 1101
            I +G+F H+A+L ++G YRT+K  QTV IHP+S L +  PRW +YHELV T+KE+MRQV 
Sbjct: 967  ITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVL 1026

Query: 1102 ELKPEWLVEIAPHFYQLKDVEDLSQKKMPRGQGRPAE 1122
            E++  WL+E+APH+Y+ K++ED   KKMP+  G+  E
Sbjct: 1027 EIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTRE 1041

BLAST of CmaCh11G001950 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 1558.1 bits (4033), Expect = 0.0e+00
Identity = 790/1045 (75.60%), Postives = 927/1045 (88.71%), Query Frame = 0

Query: 80   NDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAE 139
            ND+KTW+SD+LM LLG+SQ  +V Y+I ++K+  SP ++V +L VD+G  SS +T +FAE
Sbjct: 4    NDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGEL-VDYGFSSSGDTRSFAE 63

Query: 140  GIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEE---VLEDKGGSGDPRET 199
             IF+RVPR K+ G+NLYQK E EAA+L R QK Y LLDADD+E   V+E K    + R++
Sbjct: 64   EIFARVPR-KTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSSVSESRKS 123

Query: 200  ENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSEDDGSESEEERQRDQREREQL 259
            +  KKRFRKK+  Q DE D  E A+  ++R V+R+  S EDDGSESEEER RDQ+ERE+L
Sbjct: 124  DKGKKRFRKKSG-QSDESD-GEVAVREDSRHVRRKV-SEEDDGSESEEERVRDQKEREEL 183

Query: 260  ERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSRQEYLKKREEKKL 319
            E+++++RD A T+KLTEQ LS+KE+EEA+RR+ ALE D   +LRKVSRQEYLKKRE+KKL
Sbjct: 184  EQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYLKKREQKKL 243

Query: 320  EEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRIDEADEINEYRMPEAYDQEG 379
            +E+RD+IEDEQYLF G KLTE E RE RYKKE+Y+LVKKR  + D + EYR+P+AYDQEG
Sbjct: 244  DELRDEIEDEQYLFGGEKLTETELREFRYKKELYDLVKKRTQDEDNVEEYRIPDAYDQEG 303

Query: 380  GVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQADDYQFVF 439
            GV+Q+KRF+VA+QRYRD  + +KMNPFAEQEAWE+HQIGKA++KFG+KNK+ +DDYQFVF
Sbjct: 304  GVDQEKRFSVAVQRYRDLDSTEKMNPFAEQEAWEDHQIGKATLKFGAKNKQASDDYQFVF 363

Query: 440  EDQIEFIKASVMEGDEFVDEHQIESLEKSKA-KSALEKLQEERKTLPIYPYRDQLLQAVN 499
            EDQI FIK SVM G+ + D    +   +  A K+ALE+LQE R++LPIY YRDQLL+AV 
Sbjct: 364  EDQINFIKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVE 423

Query: 500  DYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLG 559
            ++QVLVIVG+TGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMS+AARV+QE+GVKLG
Sbjct: 424  EHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLG 483

Query: 560  HEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLFG 619
            HEVGYSIRFEDCTSDKT+LKYMTDGMLLRE LGEPDLA YSV++VDEAHERTLSTD+LFG
Sbjct: 484  HEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFG 543

Query: 620  LVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDA 679
            LVKDIARFRP+LKLLISSAT+DAEKFSDYFD+APIF  PGRRYPVEIN+T APEADY+DA
Sbjct: 544  LVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDA 603

Query: 680  AIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTE 739
            AIVT L IHV +P GDILVF TGQEEIE AEEI+KHR RGLGTKI ELIICPIYANLP+E
Sbjct: 604  AIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSE 663

Query: 740  LQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPI 799
            LQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRTGMESL ++PI
Sbjct: 664  LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPI 723

Query: 800  SKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHD 859
            SKASA QRAGR+GRT PG C+RLYTA++Y N++E+NTVPE+QRTNLA+VVL LKSLGIHD
Sbjct: 724  SKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHD 783

Query: 860  LVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKH 919
            L+NFDFMD PP+EAL+K+LELL+ALGALNKLGELTK GRRMAEFPLDPMLSKM+V S+K+
Sbjct: 784  LINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKY 843

Query: 920  KCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNY 979
            KCSDEIISIAAMLSIG SIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVY+SW+ETN+
Sbjct: 844  KCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNF 903

Query: 980  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAK 1039
            STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SNLN+LD+++K+I++GFFPH+AK
Sbjct: 904  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAK 963

Query: 1040 LQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIA 1099
            LQKNGSYRT+KHPQTVHIHP+SGL+QVLPRW VYHELV TSKEYMRQVTELKPEWL+E+A
Sbjct: 964  LQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELA 1023

Query: 1100 PHFYQLKDVEDLSQKKMPRGQGRPA 1121
            PH+YQLKDVED + KKMP+G G+ A
Sbjct: 1024 PHYYQLKDVEDAASKKMPKGAGKAA 1043

BLAST of CmaCh11G001950 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 1532.3 bits (3966), Expect = 0.0e+00
Identity = 782/1045 (74.83%), Postives = 918/1045 (87.85%), Query Frame = 0

Query: 80   NDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAFAE 139
            ND+KTW+SD+LM LLG+SQ  +V Y+I ++K+  SP ++V +L VD+G  SS +T +FAE
Sbjct: 4    NDLKTWVSDKLMMLLGYSQAAVVNYLIAMAKKTKSPTELVGEL-VDYGFSSSGDTRSFAE 63

Query: 140  GIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEE---VLEDKGGSGDPRET 199
             IF+RVPR K+ G+NLYQK E EAA+L R QK Y LLDADD+E   V+E K    + R++
Sbjct: 64   EIFARVPR-KTAGVNLYQKHEAEAAMLVRKQKTYALLDADDDEDEVVVEKKSSVSESRKS 123

Query: 200  ENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSEDDGSESEEERQRDQREREQL 259
            +  KKRFRKK+  Q DE D  E A+  ++R V+R+  S EDDGSESEEER RDQ+ERE+L
Sbjct: 124  DKGKKRFRKKSG-QSDESD-GEVAVREDSRHVRRKV-SEEDDGSESEEERVRDQKEREEL 183

Query: 260  ERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSRQEYLKKREEKKL 319
            E+++++RD A T+KLTEQ LS+KE+EEA+RR+ ALE D   +LRKVSRQEYLKKRE+KKL
Sbjct: 184  EQHLKDRDTARTRKLTEQTLSKKEKEEAVRRANALEKDDLYSLRKVSRQEYLKKREQKKL 243

Query: 320  EEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRIDEADEINEYRMPEAYDQEG 379
            +E+RD+IEDEQYLF G KLTE E RE RYKKE+Y+LVKKR  + D +          +EG
Sbjct: 244  DELRDEIEDEQYLFGGEKLTETELREFRYKKELYDLVKKRTQDEDNV----------EEG 303

Query: 380  GVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQADDYQFVF 439
            GV+Q+KRF+VA+QRYRD  + +KMNPFAEQEAWE+HQIGKA++KFG+KNK+ +DDYQFVF
Sbjct: 304  GVDQEKRFSVAVQRYRDLDSTEKMNPFAEQEAWEDHQIGKATLKFGAKNKQASDDYQFVF 363

Query: 440  EDQIEFIKASVMEGDEFVDEHQIESLEKSKA-KSALEKLQEERKTLPIYPYRDQLLQAVN 499
            EDQI FIK SVM G+ + D    +   +  A K+ALE+LQE R++LPIY YRDQLL+AV 
Sbjct: 364  EDQINFIKESVMAGENYEDAMDAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVE 423

Query: 500  DYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLG 559
            ++QVLVIVG+TGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMS+AARV+QE+GVKLG
Sbjct: 424  EHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLG 483

Query: 560  HEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLFG 619
            HEVGYSIRFEDCTSDKT+LKYMTDGMLLRE LGEPDLA YSV++VDEAHERTLSTD+LFG
Sbjct: 484  HEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFG 543

Query: 620  LVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDA 679
            LVKDIARFRP+LKLLISSAT+DAEKFSDYFD+APIF  PGRRYPVEIN+T APEADY+DA
Sbjct: 544  LVKDIARFRPDLKLLISSATMDAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDA 603

Query: 680  AIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTE 739
            AIVT L IHV +P GDILVF TGQEEIE AEEI+KHR RGLGTKI ELIICPIYANLP+E
Sbjct: 604  AIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSE 663

Query: 740  LQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPI 799
            LQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRTGMESL ++PI
Sbjct: 664  LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPI 723

Query: 800  SKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHD 859
            SKASA QRAGR+GRT PG C+RLYTA++Y N++E+NTVPE+QRTNLA+VVL LKSLGIHD
Sbjct: 724  SKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHD 783

Query: 860  LVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKH 919
            L+NFDFMD PP+EAL+K+LELL+ALGALNKLGELTK GRRMAEFPLDPMLSKM+V S+K+
Sbjct: 784  LINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKY 843

Query: 920  KCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNY 979
            KCSDEIISIAAMLSIG SIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVY+SW+ETN+
Sbjct: 844  KCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNF 903

Query: 980  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAK 1039
            STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SNLN+LD+++K+I++GFFPH+AK
Sbjct: 904  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAK 963

Query: 1040 LQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIA 1099
            LQKNGSYRT+KHPQTVHIHP+SGL+QVLPRW VYHELV TSKEYMRQVTELKPEWL+E+A
Sbjct: 964  LQKNGSYRTVKHPQTVHIHPNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELA 1023

Query: 1100 PHFYQLKDVEDLSQKKMPRGQGRPA 1121
            PH+YQLKDVED + KKMP+G G+ A
Sbjct: 1024 PHYYQLKDVEDAASKKMPKGAGKAA 1033

BLAST of CmaCh11G001950 vs. TAIR 10
Match: AT2G35340.1 (helicase domain-containing protein )

HSP 1 Score: 1500.0 bits (3882), Expect = 0.0e+00
Identity = 761/1043 (72.96%), Postives = 900/1043 (86.29%), Query Frame = 0

Query: 78   GENDMKTWISDQLMSLLGFSQPTIVQYMIGLSKQAASPADVVSKLVVDFGLPSSNETLAF 137
            G ND+ TW+SD+LM LLGFSQ  +VQY+I ++KQ+ SP ++V +L V+ G   S +T AF
Sbjct: 2    GSNDLNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVREL-VECGFSLSGDTRAF 61

Query: 138  AEGIFSRVPRKKSTGLNLYQKQEREAAILARNQKKYTLLDADDEEVLED--KGGSGDPRE 197
            AE I++R PR K+ G+NLYQ+QE EAA+L + QK ++LL+AD +E   +  K  +    +
Sbjct: 62   AEEIYARAPR-KTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDENNVKKQSASKTGK 121

Query: 198  TENRKKRFRKKNEYQEDEDDEEESALERENRQVKRRTSSSEDDGSESEEERQRDQREREQ 257
            ++  +KRFRKK+E  ED+DDE     E + R V+R+ S  EDDG+ESEEER RDQRERE+
Sbjct: 122  SDKGQKRFRKKSEQLEDDDDEVVIVRE-DKRNVRRKVSEDEDDGTESEEERLRDQREREE 181

Query: 258  LERNIRERDAAGTKKLTEQKLSRKEEEEAIRRSKALENDGTDTLRKVSRQEYLKKREEKK 317
            LE+++RERD A T+KLTE K+S+KE+EE +RR  A++    ++LRK S QEY+KKR++KK
Sbjct: 182  LEQHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFSWQEYMKKRKQKK 241

Query: 318  LEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRIDEADEINEYRMPEAYDQE 377
            + E++DDIEDE YLF   KLTE E RE RYK+EIYEL+KK   E D + EYRMP+AYDQ+
Sbjct: 242  VLELKDDIEDEPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEYRMPDAYDQQ 301

Query: 378  GGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQADDYQFV 437
            G V+Q+KRFAV++QRYRD G+A+KMNPFAEQEAWE+HQI  A++KFG+KNK+ +D+Y+FV
Sbjct: 302  GSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKEVSDNYEFV 361

Query: 438  FEDQIEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAVN 497
            FEDQI+FIKASV+ GD + DE   +  + S  KSA   LQE+RK LPIY YRDQLL AV 
Sbjct: 362  FEDQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVK 421

Query: 498  DYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKLG 557
            D+QVL+IVGETGSGKTTQIPQYLHEAGYTK GKVGCTQPRRVAAMS+AARV+QE+G KLG
Sbjct: 422  DHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLG 481

Query: 558  HEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLFG 617
            HEVGYSIRFEDCTS+KTILKYMTDGMLLRE LGEPDL  YSVI+VDEAHERTL TD+LFG
Sbjct: 482  HEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFG 541

Query: 618  LVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLDA 677
            LVKDIAR RP+LKLLISSAT+DAEKFSD+FD APIF+ PGRRYPV+I FT APEADY+DA
Sbjct: 542  LVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDA 601

Query: 678  AIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPTE 737
            AI T L IHV +P GD+LVFL GQEEIEA EE +KH+ RGLGTKI ELIICPIYANLP+E
Sbjct: 602  AITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSE 661

Query: 738  LQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSPI 797
            LQAKIFEPTP GARKVVLATNIAETSLTIDGIKYV+DPGFSK+KSYNPRTGMESL V+PI
Sbjct: 662  LQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPI 721

Query: 798  SKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIHD 857
            SKASA QR GR+GRT PG C+RLYTA++YYN++EDNTVPEIQRTNLA+VVL+LKSLGIH+
Sbjct: 722  SKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHN 781

Query: 858  LVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMGRRMAEFPLDPMLSKMMVASEKH 917
            L+NFDFMD PPSEAL+K+LELL+ALGALN+LGELTK GRRMAEFPLDPMLSKM+V S+K+
Sbjct: 782  LLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKY 841

Query: 918  KCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVYNSWRETNY 977
            KCSDEIISIAAMLSIG SIFYRPKDKQVHADNA  NFH GNVGDHIA LK+YNSW+ETNY
Sbjct: 842  KCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNY 901

Query: 978  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNLNDLDAIKKTIISGFFPHSAK 1037
            STQWCYENYIQVRSMKRARDIRDQLEGLLERVEI+++SN N+LD+I+K+I++GFFPH+AK
Sbjct: 902  STQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAK 961

Query: 1038 LQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELVCTSKEYMRQVTELKPEWLVEIA 1097
            LQKNGSYRT+KHPQTVHIHP+SGL+QVLPRW VYH+LV TSKEYMRQVTELKPEWL+EIA
Sbjct: 962  LQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIA 1021

Query: 1098 PHFYQLKDVEDLSQKKMPRGQGR 1119
            PH+YQLKDVED + KKMP+  GR
Sbjct: 1022 PHYYQLKDVEDATSKKMPKTSGR 1041

BLAST of CmaCh11G001950 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 773.5 bits (1996), Expect = 2.4e-223
Identity = 370/638 (57.99%), Postives = 497/638 (77.90%), Query Frame = 0

Query: 474  LQEERKTLPIYPYRDQLLQAVNDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQ 533
            +QE+R++LPIY  + +L+QAV+D QVLV++GETGSGKTTQ+ QYL EAGYT +GK+GCTQ
Sbjct: 508  IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQ 567

Query: 534  PRRVAAMSIAARVSQELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLA 593
            PRRVAAMS+A RV++E G +LG EVGY+IRFEDCT   T++KYMTDGMLLRE L + +L+
Sbjct: 568  PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627

Query: 594  GYSVIMVDEAHERTLSTDVLFGLVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKI 653
             YSVIM+DEAHERT+ TDVLFGL+K + + R +L+L+++SATLDAEKFS YF +  IF I
Sbjct: 628  QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687

Query: 654  PGRRYPVEINFTKAPEADYLDAAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRT 713
            PGR +PVEI +TK PE DYLDAA++T LQIH+T+P GDILVFLTGQEEI++A + +  R 
Sbjct: 688  PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERM 747

Query: 714  RGLGTKIAELIICPIYANLPTELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDP 773
            +GLG  + ELII P+Y+ LP+E+Q++IF+P P G RKVV+ATNIAE SLTIDGI YV+DP
Sbjct: 748  KGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDP 807

Query: 774  GFSKIKSYNPRTGMESLQVSPISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTV 833
            GF+K   YNP+ G+ESL ++PIS+ASA QRAGR+GRTGPG C+RLYT  +Y NEM   ++
Sbjct: 808  GFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSI 867

Query: 834  PEIQRTNLANVVLTLKSLGIHDLVNFDFMDQPPSEALLKALELLYALGALNKLGELTKMG 893
            PEIQR NL    LT+K++GI+DL++FDFMD P  +AL+ A+E LY+LGAL++ G LTK+G
Sbjct: 868  PEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLG 927

Query: 894  RRMAEFPLDPMLSKMMVASEKHKCSDEIISIAAMLSIGNSIFYRPKDKQVHADNARMNFH 953
            R+MAEFPL+P LSKM++AS    CSDEI+++ AM+  GN IFYRP++KQ  AD  R  F 
Sbjct: 928  RKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFF 987

Query: 954  TGNVGDHIALLKVYNSWRETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTS 1013
                GDH+ LL VY +W+  N+S  WC+EN+IQ RS++RA+D+R QL  ++++ ++++ +
Sbjct: 988  QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVT 1047

Query: 1014 NLNDLDAIKKTIISGFFPHSAKLQKNGSYRTIKHPQTVHIHPSSGLAQVLPRWAVYHELV 1073
               +   I+K I +GFF H A+      YRT+   Q V+IHPSS L Q  P W +YH+LV
Sbjct: 1048 AGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLV 1107

Query: 1074 CTSKEYMRQVTELKPEWLVEIAPHFYQLKDVEDLSQKK 1112
             T+KEYMR+VT + P+WLVE+AP F+++ D   +S++K
Sbjct: 1108 MTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRK 1143

BLAST of CmaCh11G001950 vs. TAIR 10
Match: AT4G16680.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 693.7 bits (1789), Expect = 2.4e-199
Identity = 377/637 (59.18%), Postives = 464/637 (72.84%), Query Frame = 0

Query: 259 NIRERDAAGTKKLTEQKLSRKEEEEAIRRS---KALENDGTDTLRKVSRQEYLKKREEKK 318
           NI ++ +   ++++ ++   +E+E   + S   K L +D    LR+VSR++YL  RE KK
Sbjct: 40  NIPKKISTKRRRISVEEEEEEEDENKTKLSSWEKVLSSDEILRLREVSRRKYLTDRENKK 99

Query: 319 LEEIRDDIEDEQYLFDGVKLTEVEYRELRYKKEIYELVKKRIDEADEINEYRMPEAYDQE 378
           +EE+RD+                                           YR P+AYDQE
Sbjct: 100 VEELRDE-----------------------------------------RRYRFPDAYDQE 159

Query: 379 GGVNQDKRFAVAMQRYRDSGAADKMNPFAEQEAWEEHQIGKASMKFGSKNKKQ-ADDYQF 438
           G ++Q KRF VA +RY +   + ++    EQEAWE+HQ  KA ++FG+K+KKQ  D Y+F
Sbjct: 160 GCIDQKKRFDVAKERYCERRRSGRV--VTEQEAWEDHQAQKARVRFGAKDKKQVVDGYEF 219

Query: 439 VFEDQIEFIKASVMEGDEFVDEHQIESLEKSKAKSALEKLQEERKTLPIYPYRDQLLQAV 498
           VF+D   F++ S         E +        +K+A EK +E R+ LPI+ YR++LL+ +
Sbjct: 220 VFDDLTGFVEES--------SEAETGKHRGCYSKTAAEKAREGREFLPIHGYREELLKLI 279

Query: 499 NDYQVLVIVGETGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAAMSIAARVSQELGVKL 558
            + QVLVIVGETGSGKTTQIPQYL EAGYTKRGK+GCTQPRRVAAMS+A+RV+QE+GVKL
Sbjct: 280 EENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKL 339

Query: 559 GHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLAGYSVIMVDEAHERTLSTDVLF 618
           GHEVGYSIRFEDCTS+KT++KYMTDGMLLRE L EP L  YSVI++DEAHERTLSTD+LF
Sbjct: 340 GHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILF 399

Query: 619 GLVKDIARFRPELKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTKAPEADYLD 678
            LVKD+A+ RP+L+L+ISSATL+A+KFS+YFDSA I+ IPGRRYPVE  F K PE DYL+
Sbjct: 400 ALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLE 459

Query: 679 AAIVTALQIHVTKPPGDILVFLTGQEEIEAAEEIMKHRTRGLGTKIAELIICPIYANLPT 738
             I T +QIH T+  GDILVFLTGQEEIE  E  +K R   LGTK +E+IICPIY+NLPT
Sbjct: 460 TVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPT 519

Query: 739 ELQAKIFEPTPIGARKVVLATNIAETSLTIDGIKYVIDPGFSKIKSYNPRTGMESLQVSP 798
            LQAK+FEP P G RKVVLATNIAETSLTIDG+KYVIDPG+ KI SYNPRTGMESL V+P
Sbjct: 520 PLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTP 579

Query: 799 ISKASANQRAGRSGRTGPGMCFRLYTAYSYYNEMEDNTVPEIQRTNLANVVLTLKSLGIH 858
           ISKASA QRAGRSGRTGPG CFRLY       ++E  T+PEIQR NLA+VVLTLKSLGI 
Sbjct: 580 ISKASAAQRAGRSGRTGPGKCFRLYN----IKDLEPTTIPEIQRANLASVVLTLKSLGIQ 621

Query: 859 DLVNFDFMDQPPSEALLKALELLYALGALNKLGELTK 892
           D+ NFDFMD PP  ALLKALELLYALGAL+++GE+TK
Sbjct: 640 DVFNFDFMDPPPENALLKALELLYALGALDEIGEITK 621

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8VY000.0e+0075.60Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thalian... [more]
F4IJV40.0e+0072.96Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 OS=Arabidopsi... [more]
Q767K66.3e-30653.93Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Sus scrofa OX=9823 ... [more]
O602315.0e-30353.75Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens OX=960... [more]
Q7YR395.0e-30353.93Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Pan troglodytes OX=... [more]
Match NameE-valueIdentityDescription
AT1G32490.10.0e+0075.60RNA helicase family protein [more]
AT1G32490.20.0e+0074.83RNA helicase family protein [more]
AT2G35340.10.0e+0072.96helicase domain-containing protein [more]
AT3G26560.12.4e-22357.99ATP-dependent RNA helicase, putative [more]
AT4G16680.12.4e-19959.18P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 457..477
NoneNo IPR availableCOILSCoilCoilcoord: 239..266
NoneNo IPR availableCOILSCoilCoilcoord: 990..1010
NoneNo IPR availableCOILSCoilCoilcoord: 302..329
NoneNo IPR availableGENE3D1.20.120.1080coord: 857..1014
e-value: 1.6E-32
score: 113.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 244..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..237
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 183..1118
NoneNo IPR availablePANTHERPTHR18934:SF208OS05G0389800 PROTEINcoord: 183..1118
NoneNo IPR availableCDDcd18791SF2_C_RHAcoord: 658..819
e-value: 4.01971E-70
score: 229.727
IPR007502Helicase-associated domainSMARTSM00847ha2_5coord: 872..964
e-value: 1.5E-36
score: 137.4
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 873..947
e-value: 4.8E-22
score: 78.3
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 479..663
e-value: 1.5E-32
score: 124.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 491..654
score: 19.273718
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 706..811
e-value: 1.4E-16
score: 71.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 683..811
e-value: 2.2E-12
score: 47.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 677..852
score: 16.758076
IPR011709Domain of unknown function DUF1605PFAMPF07717OB_NTP_bindcoord: 1021..1097
e-value: 3.7E-18
score: 65.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 657..832
e-value: 1.0E-69
score: 235.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 436..656
e-value: 2.5E-92
score: 310.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 476..1005
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 596..605

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G001950.1CmaCh11G001950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0004386 helicase activity