CmaCh11G001940 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCCGTTGTTTACAGGTTTTCACCCACTCAAATTCGTTCTGTTATCATCTCCATCTGATTTCAATTCAACGTCGTTGATCCAAAGATGGATTTTCATTTTAGGCATTTCCTTTAATATCCGCCTCGGTTGTCTTCTTAAACCATTCACCTGGTCAAGGTTTTACAGAGAGGTTCAATGATCGTCTCATTCGTGCATTATTATTTAAATGTCTGATCCGTGAGCCCCGATTTCGGGTGTTTTCACTTAATTCTATTACGATCTTCGATGATCTGTTGATCAACCTCCACTTTTTATCCTTCTGGGACTGTTCAATTCACGAATTCAGGTAAATTTGGTCTTCTCCGAAATAGGGATACCATTTATTTTGGACCCAAATCGGGTTAGGCAAGACTTCTTCGCATTCCCTGTTCATAAGTGATCGAAGCTGTGTTCGTGTGATTGTATCTCTGCAGAGGCTCGGGAACTAATATCCCTGGTACGAAATTTGAGAAGTTCTAAGTTCATTTTTACTGTATTTATTTAAAATGTGACTAGAAATCTCTTGATCAACGATATTAAAAAGATGGAATGCATGATTTTTATCATATGCTCAGCACGAGAGACAATGTTTCTCATCACTGGAGTTCAAGCCTGATACAAATCAACGAACAAAATGAATTCTGAATCTTAATGATATTTAGTTGAAAGGCTCTGCATCTTGTTAAAAGTTACTGTGAGGATATTTGTATCAGTGCCTTGTTAATATTTTGTTATATTTTACCAAGCAGCGTAGACCAACATGTATTCCTTATACTGAGGTTGGAGATTTAAATCTCCACTTGTATATATAGATATATGTATGTATGTATATGGATAGTTATAGAGTGCCCAATCCGTTCCAAGTTCTGTGGAAGTACTACAATTCAGTTCTGCTATTTCTGACACTTGGATTGTATATGTATCAGAGACGGATTCGAAAAGCTTGTTATCACTGTCATCCTTGTTCCTTTCTTGGAAGGCTGAGTTTTTCTCTGCTGCTGGCAACATGGGGTGCTATTCTAGCAAGAATGCAGATTCAAAGGCCAGCAGAGTTGCTCGATGGCAATCTACTGGCATCGTGGCTTTGCGAGACTCAAAGCTGAAGGTTATCTACCTTATTATTTTTAACATCAACTGTATATCGTCTTTTTGTTAGGCTTTGGCCATCATGCTTATCAATGTTATGTTTGGATAAGAGTTATGTACCAAGTGGACATATGGCTGTCTTTGTTGGAGGTCTTTGAGTGATTCTGATTGTTTATAAAAACCTCTTGCTCCGTTAGAAGTAAGTACTTATTTAGTAATTGACAAATTAACTTCTCTATGAGATATATATTTGTATGCTAATGCATTATTTATGCATGTGATTGAATGTCGCGGCATTGAGGAATTAGGAATGTACGTGGTTGACGGGATCATTTCAAGTTATTAATTAGATTTTTCTTAGATGGAAGAAATCTCATCAAAGGAATAAAATGTGTCTTACAAAACCAAAGGACAAGGGGATTCCAAAACGTTCTTCCAGTCGGGACAAATGAAAGAAAGATTACAGTAACAAACCCCTTACATGCATGTTCTTTTTACCTGTGTTTTCCAGAAAGATATCGACAAGGATTTCATTATGCTGTAAATAGGGTCAACTGTAAATGTTAGTTATACGTGGACCTTTGCTTTACGATACATCTGGCTATACTGATGTTGTTGATATTTGGATTGCATGAATTGGGGCTTTCACACAGAAATATTGTCATTCTGAAAAGTACCATACGAGTAGATGAATTCTAATAGCTCATGCCATTCTTTGCAAATGCTCACACGATAATCAATTTTGTTGGTCATATTCTCACACATTTACCAATCTTGGAACAGACCTTTCCTGATGAAGTTCTTGACTTGGATAGATCTGTCCGCACCCTCGATCTAACTCACAATAAAATAGGTGGTTATATCTCTAACTGTTCTTTCTTATGCTTCATGTTGCGGTCATAATTTTCGTTGAAAAGCTATTTTCTGACTTTAATCATCCTTGTATTGGATTAAAATTGCCGATAATGAAACTACTAATAATAATTTCAATACTTGTATTAATTTGTCTCTTCTGATTATTTTGCAGTTGATATTCCCATGGAAGTGTGCAAATTAATAAACATGCAGCGTCTGGTAGGGATTGTATTTCATTTTTACTCAGCTTATGCAGTATTGATTTGTAAAATTTTTCAATAAAAGCCTATGACATCTTTGTAAAACTCTGTGATTCTGTTCTCATTATTTGTACTTGGCACATAGGAATTGTTGAATTTTTCTCTTTCCTTTCTTTTTTAGATTTAAAACAGTTTATTAGAAGAAGAACTAAGAATTCTGATGCTTTTTCTCACATTTCTCTTTTGGAGGGAAAAAAGAAAAGACTGCAACTGGAAACAAGACTGAATTAAATTTTTATTTTCCTTGTCAGATATTGGCAGATAACCTTATTGAGCGTCTACCAATGAATTTGGGGAAGCTCCAATCTCTAAAAGTCATGATGCTTGATGGAAATCAAATTACGGCATTACCCGATGAATGTAATTTTCTTATCAACTTATCAAGAGATATAAAAAAGAATGCAAGAAGCGATAATATTTTTCTCCTTGTCCCATACTACCGCAACTTCTGTTAGACTTTCCTACAATTTTTTTTTTTTAATGCATTCTAAATGAATATCAGTTCTTGTGTGTAGTGGGTCAGCTAGTAAGGCTTGAACGTTTATCTGTCTCCCGAAATTTGCTATCATCCTTACCTGAAACCATTGGAAGCTTGCGGAATGTAAGTGAATTTTATTTTTTATTCTTAGCATTTTAACAATTATACCACTTCTGTCATTTTTTATTTGGTTGCATTTTCAGAGAACTTCAAGTTATGTTGTCTCTAACATCGAGTCAAAGTATTGGATCGTGGTATTGTAGATCTATGACTGCATATGTGGCAGCAACTACTTTAAAATTCTTCATGTCCATATCTCAAGTTGGAATGGCAAAAAATGGGTGCCTCAGCAACCAATTATAGATAAACAAAATAAAATACGTTTGGAGCGTTAAAATAATGGTTAAAGAGGATTATGTGCCATAGCTAGTTTAGAAGATAATTCACCCTGCAATATGGAATATTTCTGTGCAAAAGTTGTTTTGCTGTACATGTTTTCACATATTAGAACTTATGGTTGGACACCTTAGAGTATATACTCAGAGGTAAAAGTCCTTAGAAGTTAGATAAACAAAAATGGAAAAAAAAAGAGAAAAGAATCATAGGAGAGTGATTCGTTTAAGACTGATTGTTTAAGATTATAAGTAAACAAAATAGTTTGGAAACCTCTTTTTCATTCTAACTAGGATATACTCGTGATCAATCTTTCGTGTTTGCGGAAAATGACACATCCATGACCATGAGAAGAGACCGGGCAAAGTTCCATTACCCATCCAAAGGAAGCACTTTCATTGCAGCAGAATTCCAAGAGACCTTGAGAGACCTATAAATTTTATCAATCATGAGATTATGAAAGCCTCAACATCGTAACACTTGTATTTATACTGAAGTTAATAATGAATTTCATTGCATATGGACCAATATTCATGCTGATGTCTATCGAAAGTCAATTAGCGAGATCGTGCTAATTTTTTTTTTAACCATTTATTTTGATGTGGTAAAATGTGCATAGTACCAACCTCAGGGCTAACGCGAAGTTTGATGATGCAGTTATTTCTTATCAATGTGTCAAACAACAAGTTAAAATCTCTCCCAGAATCAATAGGAAGTTGTTTCTCCCTTGAAGAATTGCAAGCAAATGGTATGTGAAGTTCTTGCCCATCTTTTTACTGGGAAATGCCCATATGCTACTTTGACAGTTGTTATTTGGCAGCATGAATGATGACTTGGAACTTCAAACATTTGCGATTCTGTTCAAACATTTCCTTACATTTAAACAACTTTTCAGATAATCTTATGGAAGGCCTTCCCTCGCCTGTGTGCAATCTAATTCACCTGAAGTCGTTGTGTTTGGATAACAACAATATCGGTCAGGTAGACTTTTTCACTATTTGTGCACTATTTAGCTTTCTAAATTAACAGTTCTGGTTATAGCCACGAATGCGATACTATTTAACATAAAACGAATATCCTTTACTGATTATAGCCTGAGTTTTTGAGATGTACCTGGAGGATTGGCACTCCTTGATAGATCTCAAAAACTCGGGCTATAATCAGTAAAGGAGTGCCAATGTGCCAACCTGAAATTGAAATCAATCGCTGAACTGAAAGTCATGAGGAAAAACTAGTTCATTAGATTGGGCATCTTCACTTAATAGACTGTTATTTTGATATGAATCTCTCATGAATGAATAATTTCTACTCCAAATGCTATCTTATTTGTTCTTACATAATAAATTTCTCTCCATTGTATGCTTAGAAGTTTTCCTCTCAGGGCACGTAAATTTGATCCGTGGTCTTGTATTTCTATCTCAGCTACCATCGAATCTGTTGAAAGATTGCAAAGCATTGCATAATGTATCTTTACATGGTAATCCAATTATAATGGATCAATTTCAGCAGGTGTGGTCTACTTCTTAATTGCACTTCTCTCTCATTTAACATTATTCATAAAACAAGTGAAATATACTTATTGATACTGCTTGTTCTTCCATGGACGACTAGATGGAAGGATTTGATGAATTTGAAGGTAGGAGAAAAAAGAAATTTGACAAACAAATTGATTCCAATGTCATGATCAGTTCCAAGGGCCTTGATGAGGGTGTCGATCTATAAAACCTTTGCACTGCCTTTATAAAAGAAAAATTGTAAGTTAGAATGCTAAATCTATACATTATTTTCTGTGTTATAAACTTATTCAAATGCATCCTTGGTCTTATTACCTTGCATTTAGCTGTACATTTTGGATGTAATGGTATCATTTTAGTCGTTATAATTTAACAAATGAGTTAGTCGGTTGCAACCGAGTCGTATGAATAAGTAGGTAGTTGAATCACTTTTGATCATGGATGTTCATCGACTATTCTATTATTCATCATTATCTATAGGTTGTTTTTCGATCAAATTTTTAAATGAACGTTTTCACTCGAGATTACATTGTGACGTTATCAATGGTACACAACTGCCCTCTCTTTTGGCTATATCTTCTCTGACTTTACTCATTTCAACCTACACTATTCTGTACAGATTGAAGGAGACGGTTTGCTTGTTTGCTTCCTTGTTGCTGTAAATTCAAAGTGTGTGAAAGAATTGGGACTCAATTGTGCAACGTTTTGCAACATAAAACTGTACACAGGAGGGGGCTCCGGTACCACTGCAGTTTCGTGTATAAAATCATAAGCCTTTTAATTGTGTTTAATTGTGATAAATGACTTATTTACGGTAGATATTATTATTGTAGTTTAAAAAATATTACAAATATAGTCTTTTGGAGGAAATATATATATATAAATTGCTTTGTTGTCATGAAAATTTATTAC ATGGATCCGTTGTTTACAGAGGCTCGGGAACTAATATCCCTGAGTGCCCAATCCGTTCCAAGTTCTGTGGAAGTACTACAATTCAGTTCTGCTATTTCTGACACTTGGATTGTATATGTATCAGAGACGGATTCGAAAAGCTTGTTATCACTGTCATCCTTGTTCCTTTCTTGGAAGGCTGAGTTTTTCTCTGCTGCTGGCAACATGGGGTGCTATTCTAGCAAGAATGCAGATTCAAAGGCCAGCAGAGTTGCTCGATGGCAATCTACTGGCATCGTGGCTTTGCGAGACTCAAAGCTGAAGACCTTTCCTGATGAAGTTCTTGACTTGGATAGATCTGTCCGCACCCTCGATCTAACTCACAATAAAATAGTTGATATTCCCATGGAAGTGTGCAAATTAATAAACATGCAGCGTCTGATATTGGCAGATAACCTTATTGAGCGTCTACCAATGAATTTGGGGAAGCTCCAATCTCTAAAAGTCATGATGCTTGATGGAAATCAAATTACGGCATTACCCGATGAATTGGGTCAGCTAGTAAGGCTTGAACGTTTATCTGTCTCCCGAAATTTGCTATCATCCTTACCTGAAACCATTGGAAGCTTGCGGAATTTATTTCTTATCAATGTGTCAAACAACAAGTTAAAATCTCTCCCAGAATCAATAGGAAGTTGTTTCTCCCTTGAAGAATTGCAAGCAAATGATAATCTTATGGAAGGCCTTCCCTCGCCTGTGTGCAATCTAATTCACCTGAAGTCGTTGTGTTTGGATAACAACAATATCGGTCAGCTACCATCGAATCTGTTGAAAGATTGCAAAGCATTGCATAATGTATCTTTACATGGTAATCCAATTATAATGGATCAATTTCAGCAGATGGAAGGATTTGATGAATTTGAAGGTAGGAGAAAAAAGAAATTTGACAAACAAATTGATTCCAATGTCATGATCAGTTCCAAGGGCCTTGATGAGGGTGTCGATCTATAAAACCTTTGCACTGCCTTTATAAAAGAAAAATTATTGAAGGAGACGGTTTGCTTGTTTGCTTCCTTGTTGCTGTAAATTCAAAGTGTGTGAAAGAATTGGGACTCAATTGTGCAACGTTTTGCAACATAAAACTGTACACAGGAGGGGGCTCCGGTACCACTGCAGTTTCGTGTATAAAATCATAAGCCTTTTAATTGTGTTTAATTGTGATAAATGACTTATTTACGGTAGATATTATTATTGTAGTTTAAAAAATATTACAAATATAGTCTTTTGGAGGAAATATATATATATAAATTGCTTTGTTGTCATGAAAATTTATTAC ATGGATCCGTTGTTTACAGAGGCTCGGGAACTAATATCCCTGAGTGCCCAATCCGTTCCAAGTTCTGTGGAAGTACTACAATTCAGTTCTGCTATTTCTGACACTTGGATTGTATATGTATCAGAGACGGATTCGAAAAGCTTGTTATCACTGTCATCCTTGTTCCTTTCTTGGAAGGCTGAGTTTTTCTCTGCTGCTGGCAACATGGGGTGCTATTCTAGCAAGAATGCAGATTCAAAGGCCAGCAGAGTTGCTCGATGGCAATCTACTGGCATCGTGGCTTTGCGAGACTCAAAGCTGAAGACCTTTCCTGATGAAGTTCTTGACTTGGATAGATCTGTCCGCACCCTCGATCTAACTCACAATAAAATAGTTGATATTCCCATGGAAGTGTGCAAATTAATAAACATGCAGCGTCTGATATTGGCAGATAACCTTATTGAGCGTCTACCAATGAATTTGGGGAAGCTCCAATCTCTAAAAGTCATGATGCTTGATGGAAATCAAATTACGGCATTACCCGATGAATTGGGTCAGCTAGTAAGGCTTGAACGTTTATCTGTCTCCCGAAATTTGCTATCATCCTTACCTGAAACCATTGGAAGCTTGCGGAATTTATTTCTTATCAATGTGTCAAACAACAAGTTAAAATCTCTCCCAGAATCAATAGGAAGTTGTTTCTCCCTTGAAGAATTGCAAGCAAATGATAATCTTATGGAAGGCCTTCCCTCGCCTGTGTGCAATCTAATTCACCTGAAGTCGTTGTGTTTGGATAACAACAATATCGGTCAGCTACCATCGAATCTGTTGAAAGATTGCAAAGCATTGCATAATGTATCTTTACATGGTAATCCAATTATAATGGATCAATTTCAGCAGATGGAAGGATTTGATGAATTTGAAGGTAGGAGAAAAAAGAAATTTGACAAACAAATTGATTCCAATGTCATGATCAGTTCCAAGGGCCTTGATGAGGGTGTCGATCTATAA MDPLFTEARELISLSAQSVPSSVEVLQFSSAISDTWIVYVSETDSKSLLSLSSLFLSWKAEFFSAAGNMGCYSSKNADSKASRVARWQSTGIVALRDSKLKTFPDEVLDLDRSVRTLDLTHNKIVDIPMEVCKLINMQRLILADNLIERLPMNLGKLQSLKVMMLDGNQITALPDELGQLVRLERLSVSRNLLSSLPETIGSLRNLFLINVSNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLDNNNIGQLPSNLLKDCKALHNVSLHGNPIIMDQFQQMEGFDEFEGRRKKKFDKQIDSNVMISSKGLDEGVDL Homology
BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: B9F655 (Plant intracellular Ras-group-related LRR protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL7 PE=2 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 3.3e-93 Identity = 171/261 (65.52%), Postives = 214/261 (81.99%), Query Frame = 0
BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: Q7XDQ7 (Plant intracellular Ras-group-related LRR protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL8 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.0e-43 Identity = 106/268 (39.55%), Postives = 157/268 (58.58%), Query Frame = 0
BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: P0C895 (LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana OX=3702 GN=At2g30105 PE=1 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.4e-40 Identity = 95/250 (38.00%), Postives = 144/250 (57.60%), Query Frame = 0
BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: A6H6A4 (Leucine-rich repeat and IQ domain-containing protein 4 OS=Mus musculus OX=10090 GN=Lrriq4 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25 Identity = 74/206 (35.92%), Postives = 120/206 (58.25%), Query Frame = 0
BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: Q5M8G4 (Leucine-rich repeat-containing protein 40 OS=Xenopus tropicalis OX=8364 GN=lrrc40 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.8e-25 Identity = 71/194 (36.60%), Postives = 110/194 (56.70%), Query Frame = 0
BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT5G07910.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 380.2 bits (975), Expect = 1.7e-105 Identity = 190/261 (72.80%), Postives = 227/261 (86.97%), Query Frame = 0
BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT2G30105.1 (CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). ) HSP 1 Score: 168.3 bits (425), Expect = 1.0e-41 Identity = 95/250 (38.00%), Postives = 144/250 (57.60%), Query Frame = 0
BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT2G17440.1 (plant intracellular ras group-related LRR 5 ) HSP 1 Score: 115.9 bits (289), Expect = 6.0e-26 Identity = 70/171 (40.94%), Postives = 106/171 (61.99%), Query Frame = 0
BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT4G35470.1 (plant intracellular ras group-related LRR 4 ) HSP 1 Score: 109.4 bits (272), Expect = 5.6e-24 Identity = 67/171 (39.18%), Postives = 106/171 (61.99%), Query Frame = 0
BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT3G15410.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 100.1 bits (248), Expect = 3.4e-21 Identity = 61/177 (34.46%), Postives = 99/177 (55.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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