CmaCh11G001940 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G001940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionplant intracellular Ras-group-related LRR protein 7-like
LocationCma_Chr11: 983312 .. 988832 (-)
RNA-Seq ExpressionCmaCh11G001940
SyntenyCmaCh11G001940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCGTTGTTTACAGGTTTTCACCCACTCAAATTCGTTCTGTTATCATCTCCATCTGATTTCAATTCAACGTCGTTGATCCAAAGATGGATTTTCATTTTAGGCATTTCCTTTAATATCCGCCTCGGTTGTCTTCTTAAACCATTCACCTGGTCAAGGTTTTACAGAGAGGTTCAATGATCGTCTCATTCGTGCATTATTATTTAAATGTCTGATCCGTGAGCCCCGATTTCGGGTGTTTTCACTTAATTCTATTACGATCTTCGATGATCTGTTGATCAACCTCCACTTTTTATCCTTCTGGGACTGTTCAATTCACGAATTCAGGTAAATTTGGTCTTCTCCGAAATAGGGATACCATTTATTTTGGACCCAAATCGGGTTAGGCAAGACTTCTTCGCATTCCCTGTTCATAAGTGATCGAAGCTGTGTTCGTGTGATTGTATCTCTGCAGAGGCTCGGGAACTAATATCCCTGGTACGAAATTTGAGAAGTTCTAAGTTCATTTTTACTGTATTTATTTAAAATGTGACTAGAAATCTCTTGATCAACGATATTAAAAAGATGGAATGCATGATTTTTATCATATGCTCAGCACGAGAGACAATGTTTCTCATCACTGGAGTTCAAGCCTGATACAAATCAACGAACAAAATGAATTCTGAATCTTAATGATATTTAGTTGAAAGGCTCTGCATCTTGTTAAAAGTTACTGTGAGGATATTTGTATCAGTGCCTTGTTAATATTTTGTTATATTTTACCAAGCAGCGTAGACCAACATGTATTCCTTATACTGAGGTTGGAGATTTAAATCTCCACTTGTATATATAGATATATGTATGTATGTATATGGATAGTTATAGAGTGCCCAATCCGTTCCAAGTTCTGTGGAAGTACTACAATTCAGTTCTGCTATTTCTGACACTTGGATTGTATATGTATCAGAGACGGATTCGAAAAGCTTGTTATCACTGTCATCCTTGTTCCTTTCTTGGAAGGCTGAGTTTTTCTCTGCTGCTGGCAACATGGGGTGCTATTCTAGCAAGAATGCAGATTCAAAGGCCAGCAGAGTTGCTCGATGGCAATCTACTGGCATCGTGGCTTTGCGAGACTCAAAGCTGAAGGTTATCTACCTTATTATTTTTAACATCAACTGTATATCGTCTTTTTGTTAGGCTTTGGCCATCATGCTTATCAATGTTATGTTTGGATAAGAGTTATGTACCAAGTGGACATATGGCTGTCTTTGTTGGAGGTCTTTGAGTGATTCTGATTGTTTATAAAAACCTCTTGCTCCGTTAGAAGTAAGTACTTATTTAGTAATTGACAAATTAACTTCTCTATGAGATATATATTTGTATGCTAATGCATTATTTATGCATGTGATTGAATGTCGCGGCATTGAGGAATTAGGAATGTACGTGGTTGACGGGATCATTTCAAGTTATTAATTAGATTTTTCTTAGATGGAAGAAATCTCATCAAAGGAATAAAATGTGTCTTACAAAACCAAAGGACAAGGGGATTCCAAAACGTTCTTCCAGTCGGGACAAATGAAAGAAAGATTACAGTAACAAACCCCTTACATGCATGTTCTTTTTACCTGTGTTTTCCAGAAAGATATCGACAAGGATTTCATTATGCTGTAAATAGGGTCAACTGTAAATGTTAGTTATACGTGGACCTTTGCTTTACGATACATCTGGCTATACTGATGTTGTTGATATTTGGATTGCATGAATTGGGGCTTTCACACAGAAATATTGTCATTCTGAAAAGTACCATACGAGTAGATGAATTCTAATAGCTCATGCCATTCTTTGCAAATGCTCACACGATAATCAATTTTGTTGGTCATATTCTCACACATTTACCAATCTTGGAACAGACCTTTCCTGATGAAGTTCTTGACTTGGATAGATCTGTCCGCACCCTCGATCTAACTCACAATAAAATAGGTGGTTATATCTCTAACTGTTCTTTCTTATGCTTCATGTTGCGGTCATAATTTTCGTTGAAAAGCTATTTTCTGACTTTAATCATCCTTGTATTGGATTAAAATTGCCGATAATGAAACTACTAATAATAATTTCAATACTTGTATTAATTTGTCTCTTCTGATTATTTTGCAGTTGATATTCCCATGGAAGTGTGCAAATTAATAAACATGCAGCGTCTGGTAGGGATTGTATTTCATTTTTACTCAGCTTATGCAGTATTGATTTGTAAAATTTTTCAATAAAAGCCTATGACATCTTTGTAAAACTCTGTGATTCTGTTCTCATTATTTGTACTTGGCACATAGGAATTGTTGAATTTTTCTCTTTCCTTTCTTTTTTAGATTTAAAACAGTTTATTAGAAGAAGAACTAAGAATTCTGATGCTTTTTCTCACATTTCTCTTTTGGAGGGAAAAAAGAAAAGACTGCAACTGGAAACAAGACTGAATTAAATTTTTATTTTCCTTGTCAGATATTGGCAGATAACCTTATTGAGCGTCTACCAATGAATTTGGGGAAGCTCCAATCTCTAAAAGTCATGATGCTTGATGGAAATCAAATTACGGCATTACCCGATGAATGTAATTTTCTTATCAACTTATCAAGAGATATAAAAAAGAATGCAAGAAGCGATAATATTTTTCTCCTTGTCCCATACTACCGCAACTTCTGTTAGACTTTCCTACAATTTTTTTTTTTTAATGCATTCTAAATGAATATCAGTTCTTGTGTGTAGTGGGTCAGCTAGTAAGGCTTGAACGTTTATCTGTCTCCCGAAATTTGCTATCATCCTTACCTGAAACCATTGGAAGCTTGCGGAATGTAAGTGAATTTTATTTTTTATTCTTAGCATTTTAACAATTATACCACTTCTGTCATTTTTTATTTGGTTGCATTTTCAGAGAACTTCAAGTTATGTTGTCTCTAACATCGAGTCAAAGTATTGGATCGTGGTATTGTAGATCTATGACTGCATATGTGGCAGCAACTACTTTAAAATTCTTCATGTCCATATCTCAAGTTGGAATGGCAAAAAATGGGTGCCTCAGCAACCAATTATAGATAAACAAAATAAAATACGTTTGGAGCGTTAAAATAATGGTTAAAGAGGATTATGTGCCATAGCTAGTTTAGAAGATAATTCACCCTGCAATATGGAATATTTCTGTGCAAAAGTTGTTTTGCTGTACATGTTTTCACATATTAGAACTTATGGTTGGACACCTTAGAGTATATACTCAGAGGTAAAAGTCCTTAGAAGTTAGATAAACAAAAATGGAAAAAAAAAGAGAAAAGAATCATAGGAGAGTGATTCGTTTAAGACTGATTGTTTAAGATTATAAGTAAACAAAATAGTTTGGAAACCTCTTTTTCATTCTAACTAGGATATACTCGTGATCAATCTTTCGTGTTTGCGGAAAATGACACATCCATGACCATGAGAAGAGACCGGGCAAAGTTCCATTACCCATCCAAAGGAAGCACTTTCATTGCAGCAGAATTCCAAGAGACCTTGAGAGACCTATAAATTTTATCAATCATGAGATTATGAAAGCCTCAACATCGTAACACTTGTATTTATACTGAAGTTAATAATGAATTTCATTGCATATGGACCAATATTCATGCTGATGTCTATCGAAAGTCAATTAGCGAGATCGTGCTAATTTTTTTTTTAACCATTTATTTTGATGTGGTAAAATGTGCATAGTACCAACCTCAGGGCTAACGCGAAGTTTGATGATGCAGTTATTTCTTATCAATGTGTCAAACAACAAGTTAAAATCTCTCCCAGAATCAATAGGAAGTTGTTTCTCCCTTGAAGAATTGCAAGCAAATGGTATGTGAAGTTCTTGCCCATCTTTTTACTGGGAAATGCCCATATGCTACTTTGACAGTTGTTATTTGGCAGCATGAATGATGACTTGGAACTTCAAACATTTGCGATTCTGTTCAAACATTTCCTTACATTTAAACAACTTTTCAGATAATCTTATGGAAGGCCTTCCCTCGCCTGTGTGCAATCTAATTCACCTGAAGTCGTTGTGTTTGGATAACAACAATATCGGTCAGGTAGACTTTTTCACTATTTGTGCACTATTTAGCTTTCTAAATTAACAGTTCTGGTTATAGCCACGAATGCGATACTATTTAACATAAAACGAATATCCTTTACTGATTATAGCCTGAGTTTTTGAGATGTACCTGGAGGATTGGCACTCCTTGATAGATCTCAAAAACTCGGGCTATAATCAGTAAAGGAGTGCCAATGTGCCAACCTGAAATTGAAATCAATCGCTGAACTGAAAGTCATGAGGAAAAACTAGTTCATTAGATTGGGCATCTTCACTTAATAGACTGTTATTTTGATATGAATCTCTCATGAATGAATAATTTCTACTCCAAATGCTATCTTATTTGTTCTTACATAATAAATTTCTCTCCATTGTATGCTTAGAAGTTTTCCTCTCAGGGCACGTAAATTTGATCCGTGGTCTTGTATTTCTATCTCAGCTACCATCGAATCTGTTGAAAGATTGCAAAGCATTGCATAATGTATCTTTACATGGTAATCCAATTATAATGGATCAATTTCAGCAGGTGTGGTCTACTTCTTAATTGCACTTCTCTCTCATTTAACATTATTCATAAAACAAGTGAAATATACTTATTGATACTGCTTGTTCTTCCATGGACGACTAGATGGAAGGATTTGATGAATTTGAAGGTAGGAGAAAAAAGAAATTTGACAAACAAATTGATTCCAATGTCATGATCAGTTCCAAGGGCCTTGATGAGGGTGTCGATCTATAAAACCTTTGCACTGCCTTTATAAAAGAAAAATTGTAAGTTAGAATGCTAAATCTATACATTATTTTCTGTGTTATAAACTTATTCAAATGCATCCTTGGTCTTATTACCTTGCATTTAGCTGTACATTTTGGATGTAATGGTATCATTTTAGTCGTTATAATTTAACAAATGAGTTAGTCGGTTGCAACCGAGTCGTATGAATAAGTAGGTAGTTGAATCACTTTTGATCATGGATGTTCATCGACTATTCTATTATTCATCATTATCTATAGGTTGTTTTTCGATCAAATTTTTAAATGAACGTTTTCACTCGAGATTACATTGTGACGTTATCAATGGTACACAACTGCCCTCTCTTTTGGCTATATCTTCTCTGACTTTACTCATTTCAACCTACACTATTCTGTACAGATTGAAGGAGACGGTTTGCTTGTTTGCTTCCTTGTTGCTGTAAATTCAAAGTGTGTGAAAGAATTGGGACTCAATTGTGCAACGTTTTGCAACATAAAACTGTACACAGGAGGGGGCTCCGGTACCACTGCAGTTTCGTGTATAAAATCATAAGCCTTTTAATTGTGTTTAATTGTGATAAATGACTTATTTACGGTAGATATTATTATTGTAGTTTAAAAAATATTACAAATATAGTCTTTTGGAGGAAATATATATATATAAATTGCTTTGTTGTCATGAAAATTTATTAC

mRNA sequence

ATGGATCCGTTGTTTACAGAGGCTCGGGAACTAATATCCCTGAGTGCCCAATCCGTTCCAAGTTCTGTGGAAGTACTACAATTCAGTTCTGCTATTTCTGACACTTGGATTGTATATGTATCAGAGACGGATTCGAAAAGCTTGTTATCACTGTCATCCTTGTTCCTTTCTTGGAAGGCTGAGTTTTTCTCTGCTGCTGGCAACATGGGGTGCTATTCTAGCAAGAATGCAGATTCAAAGGCCAGCAGAGTTGCTCGATGGCAATCTACTGGCATCGTGGCTTTGCGAGACTCAAAGCTGAAGACCTTTCCTGATGAAGTTCTTGACTTGGATAGATCTGTCCGCACCCTCGATCTAACTCACAATAAAATAGTTGATATTCCCATGGAAGTGTGCAAATTAATAAACATGCAGCGTCTGATATTGGCAGATAACCTTATTGAGCGTCTACCAATGAATTTGGGGAAGCTCCAATCTCTAAAAGTCATGATGCTTGATGGAAATCAAATTACGGCATTACCCGATGAATTGGGTCAGCTAGTAAGGCTTGAACGTTTATCTGTCTCCCGAAATTTGCTATCATCCTTACCTGAAACCATTGGAAGCTTGCGGAATTTATTTCTTATCAATGTGTCAAACAACAAGTTAAAATCTCTCCCAGAATCAATAGGAAGTTGTTTCTCCCTTGAAGAATTGCAAGCAAATGATAATCTTATGGAAGGCCTTCCCTCGCCTGTGTGCAATCTAATTCACCTGAAGTCGTTGTGTTTGGATAACAACAATATCGGTCAGCTACCATCGAATCTGTTGAAAGATTGCAAAGCATTGCATAATGTATCTTTACATGGTAATCCAATTATAATGGATCAATTTCAGCAGATGGAAGGATTTGATGAATTTGAAGGTAGGAGAAAAAAGAAATTTGACAAACAAATTGATTCCAATGTCATGATCAGTTCCAAGGGCCTTGATGAGGGTGTCGATCTATAAAACCTTTGCACTGCCTTTATAAAAGAAAAATTATTGAAGGAGACGGTTTGCTTGTTTGCTTCCTTGTTGCTGTAAATTCAAAGTGTGTGAAAGAATTGGGACTCAATTGTGCAACGTTTTGCAACATAAAACTGTACACAGGAGGGGGCTCCGGTACCACTGCAGTTTCGTGTATAAAATCATAAGCCTTTTAATTGTGTTTAATTGTGATAAATGACTTATTTACGGTAGATATTATTATTGTAGTTTAAAAAATATTACAAATATAGTCTTTTGGAGGAAATATATATATATAAATTGCTTTGTTGTCATGAAAATTTATTAC

Coding sequence (CDS)

ATGGATCCGTTGTTTACAGAGGCTCGGGAACTAATATCCCTGAGTGCCCAATCCGTTCCAAGTTCTGTGGAAGTACTACAATTCAGTTCTGCTATTTCTGACACTTGGATTGTATATGTATCAGAGACGGATTCGAAAAGCTTGTTATCACTGTCATCCTTGTTCCTTTCTTGGAAGGCTGAGTTTTTCTCTGCTGCTGGCAACATGGGGTGCTATTCTAGCAAGAATGCAGATTCAAAGGCCAGCAGAGTTGCTCGATGGCAATCTACTGGCATCGTGGCTTTGCGAGACTCAAAGCTGAAGACCTTTCCTGATGAAGTTCTTGACTTGGATAGATCTGTCCGCACCCTCGATCTAACTCACAATAAAATAGTTGATATTCCCATGGAAGTGTGCAAATTAATAAACATGCAGCGTCTGATATTGGCAGATAACCTTATTGAGCGTCTACCAATGAATTTGGGGAAGCTCCAATCTCTAAAAGTCATGATGCTTGATGGAAATCAAATTACGGCATTACCCGATGAATTGGGTCAGCTAGTAAGGCTTGAACGTTTATCTGTCTCCCGAAATTTGCTATCATCCTTACCTGAAACCATTGGAAGCTTGCGGAATTTATTTCTTATCAATGTGTCAAACAACAAGTTAAAATCTCTCCCAGAATCAATAGGAAGTTGTTTCTCCCTTGAAGAATTGCAAGCAAATGATAATCTTATGGAAGGCCTTCCCTCGCCTGTGTGCAATCTAATTCACCTGAAGTCGTTGTGTTTGGATAACAACAATATCGGTCAGCTACCATCGAATCTGTTGAAAGATTGCAAAGCATTGCATAATGTATCTTTACATGGTAATCCAATTATAATGGATCAATTTCAGCAGATGGAAGGATTTGATGAATTTGAAGGTAGGAGAAAAAAGAAATTTGACAAACAAATTGATTCCAATGTCATGATCAGTTCCAAGGGCCTTGATGAGGGTGTCGATCTATAA

Protein sequence

MDPLFTEARELISLSAQSVPSSVEVLQFSSAISDTWIVYVSETDSKSLLSLSSLFLSWKAEFFSAAGNMGCYSSKNADSKASRVARWQSTGIVALRDSKLKTFPDEVLDLDRSVRTLDLTHNKIVDIPMEVCKLINMQRLILADNLIERLPMNLGKLQSLKVMMLDGNQITALPDELGQLVRLERLSVSRNLLSSLPETIGSLRNLFLINVSNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLDNNNIGQLPSNLLKDCKALHNVSLHGNPIIMDQFQQMEGFDEFEGRRKKKFDKQIDSNVMISSKGLDEGVDL
Homology
BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: B9F655 (Plant intracellular Ras-group-related LRR protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL7 PE=2 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.3e-93
Identity = 171/261 (65.52%), Postives = 214/261 (81.99%), Query Frame = 0

Query: 69  MGCYSSKNADSKASRVARWQSTGIVALRDSKLKTFPDEVLDLDRSVRTLDLTHNKIVDIP 128
           MGC SS++ADS ASRV RW+STGIVALRD++LK  P+EVL +  S+R LDLT+NKI +IP
Sbjct: 1   MGCCSSRSADSPASRVTRWRSTGIVALRDARLKVVPNEVLQVGNSLRILDLTNNKIAEIP 60

Query: 129 MEVCKLINMQRLILADNLIERLPMNLGKLQSLKVMMLDGNQITALPDELGQLVRLERLSV 188
            EV  L+NMQRL+LA NL+E +P N+G L++LK++ LD N+I+ LP+ELG L  L++LS+
Sbjct: 61  QEVGTLVNMQRLVLAGNLVESIPANIGYLRNLKILTLDRNKISVLPEELGSLSNLQQLSI 120

Query: 189 SRNLLSSLPETIGSLRNLFLINVSNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVCN 248
           S+N LS LP+++G LRN+ L+NVS+NKL +LPESIG C SLEELQAN N +E +PS +CN
Sbjct: 121 SQNSLSRLPKSVGDLRNMLLLNVSDNKLIALPESIGGCSSLEELQANGNSIEDVPSSICN 180

Query: 249 LIHLKSLCLDNNNIGQLPSNLLKDCKALHNVSLHGNPIIMDQFQQMEGFDEFEGRRKKKF 308
           L+ LKSL L+ N I QLP NLLKDCKAL N+SLH NPI MDQFQQM+GF EFE RR+KKF
Sbjct: 181 LVCLKSLSLNGNKIRQLPQNLLKDCKALQNISLHDNPISMDQFQQMDGFTEFEARRRKKF 240

Query: 309 DKQIDSNVMISSKGLDEGVDL 330
           DKQIDSNVM+SS  LDEG+DL
Sbjct: 241 DKQIDSNVMMSSTALDEGIDL 261

BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: Q7XDQ7 (Plant intracellular Ras-group-related LRR protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=IRL8 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.0e-43
Identity = 106/268 (39.55%), Postives = 157/268 (58.58%), Query Frame = 0

Query: 66  AGNMGCYSSKNADSKASRV--ARWQSTGIVALRDSKLKTFPDEVLDLDRSVRTLDLTHNK 125
           A N+     + +D+  S++   RW++TGI+AL DS LK  P+EV     S+R LD+++N 
Sbjct: 106 ASNVKEAQIQKSDTNVSKIRPERWKATGIIALSDSSLKAVPEEVWGCGSSIRVLDVSNNC 165

Query: 126 IVDIPMEVCKLINMQRLILADNLIERLPMN---LGKLQSLKVMMLDGNQITALPDELGQL 185
           I  IP E+  L ++Q+LIL  N I    ++   L  +Q+L V+ L  N++  LP  LG +
Sbjct: 166 IEAIPQEIAALRSLQKLILTANDIADGNISWEGLTCVQTLTVLSLSQNRLVTLPSSLGSI 225

Query: 186 VRLERLSVSRNLLSSLPETIGSLRNLFLINVSNNKLKSLPESIGSCFSLEELQANDNLME 245
             L  L ++ N L +LP  IG L++L ++  +NN++ SLP SIG C SL E+  + NL+ 
Sbjct: 226 THLRELRIANNRLENLPVEIGLLKHLEILIANNNRITSLPSSIGGCESLNEVDLSSNLLA 285

Query: 246 GLPSPVCNLIHLKSLCLDNNNIGQLPSNLLKDCKALHNVSLHGNPIIMDQFQQMEGFDEF 305
            LP    NL HLK+L + NN +  LPS     C  L  + LHG  I  D  +Q++G++EF
Sbjct: 286 ELPEAFGNLQHLKALSVRNNGLTSLPSAFFIKCSQLITLDLHGTEITNDVLRQVDGWEEF 345

Query: 306 EGRRKKKFDKQIDSNVMISSKGLDEGVD 329
           + RR+KK  KQ+D  V  SS   DEG D
Sbjct: 346 DERRRKKHQKQLDFRVG-SSVVFDEGAD 372

BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: P0C895 (LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsis thaliana OX=3702 GN=At2g30105 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-40
Identity = 95/250 (38.00%), Postives = 144/250 (57.60%), Query Frame = 0

Query: 82  SRVARWQSTGIVALRDSKLKTFPDEVLDLDRSVRTLDLTHNKIVDIPMEVCKLINMQRLI 141
           +R  RW++TG++AL  + LK  P+EV D    VR LD++ N I ++P ++    +MQ+L 
Sbjct: 123 NRTDRWKATGVIALAQANLKEIPEEVWDCGSGVRVLDISENFIKEVPAKISSFGSMQKLF 182

Query: 142 LADNLIERLPMNLGKLQSLKVMML---DGNQITALPDELGQLVRLERLSVSRNLLSSLPE 201
           L  N +    +    + SLK +ML     N +T LP  +G L  L +L V+ N L+SLP 
Sbjct: 183 LQGNGLSDESIQWEGIASLKRLMLLSISHNNLTVLPSAMGSLTSLRQLDVTNNKLTSLPN 242

Query: 202 TIGSLRNLFLINVSNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLD 261
            +G L  L ++  +NN++ SLPESIG+C  L E+  + N++  LP     L +LK+L L+
Sbjct: 243 ELGLLTQLEILKANNNRITSLPESIGNCSFLMEVDLSANIISELPETFTKLRNLKTLELN 302

Query: 262 NNNIGQLPSNLLKDCKALHNVSLHGNPIIMDQFQQMEGFDEFEGRRKKKFDKQIDSNVMI 321
           N  +  LPS L K C  L  + LH   I ++  +Q EG+D+F+ RR+ K  KQ+D  V +
Sbjct: 303 NTGLKTLPSALFKMCLQLSTLGLHNTEITVEFLRQFEGYDDFDERRRTKHQKQLDFRV-V 362

Query: 322 SSKGLDEGVD 329
            S   DEG D
Sbjct: 363 GSGQFDEGAD 371

BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: A6H6A4 (Leucine-rich repeat and IQ domain-containing protein 4 OS=Mus musculus OX=10090 GN=Lrriq4 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-25
Identity = 74/206 (35.92%), Postives = 120/206 (58.25%), Query Frame = 0

Query: 87  WQSTGIVALRDSKLKTFPDEVLDLDRSVRTLDLTHNKIVDIPMEVCKLINMQRLILADNL 146
           W S  ++ LR++ L    D    L  ++R LDL+ N I   P+++C L N++ L L DN 
Sbjct: 315 WVSLHLLYLRNTSLHGLRDSFKRL-INLRFLDLSQNHIEHFPVQICALKNLEILALDDNK 374

Query: 147 IERLPMNLGKLQSLKVMMLDGNQITALPDELGQLVRLERLSVSR---NLLSSLPETIGSL 206
           + +LP ++  L +LK++ L GN + + P+E+  L+ LE+L + +   + LSSLPE I  L
Sbjct: 375 VRQLPPSISLLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKRL 434

Query: 207 RNLFLINVSNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLDNNNIG 266
            NL  + + NN+L+ LP S+G   +LE L    NL++ LP  +C   +L+ L L++N + 
Sbjct: 435 MNLKELYIENNRLEQLPASLGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLLC 494

Query: 267 QLPSNL--LKDCKALHNVSLHGNPII 288
            LP NL  L + K L   +L  NP++
Sbjct: 495 CLPENLDHLVNLKVL---TLMNNPMV 516

BLAST of CmaCh11G001940 vs. ExPASy Swiss-Prot
Match: Q5M8G4 (Leucine-rich repeat-containing protein 40 OS=Xenopus tropicalis OX=8364 GN=lrrc40 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.8e-25
Identity = 71/194 (36.60%), Postives = 110/194 (56.70%), Query Frame = 0

Query: 87  WQSTGI--VALRDSKLKTFPDEVLDLDRSVRTLDLTHNKIVDIPMEVCKLINMQRLILAD 146
           W+ T +  + L  +KL+   +++  L   V  LD+  N+IV +P  + +L N+Q+L ++ 
Sbjct: 79  WEQTDLTKLILASNKLQLLSEDISLLPALV-VLDIHDNQIVSLPCAIKELTNLQKLNISH 138

Query: 147 NLIERLPMNLGKLQSLKVMMLDGNQITALPDELGQLVRLERLSVSRNLLSSLPETIGSLR 206
           N I++LP  L  LQ+LK ++L  NQ+  LPD +G L  LE L VS N L S+  ++G L 
Sbjct: 139 NKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLT 198

Query: 207 NLFLINVSNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLDNNNIGQ 266
            L   N+S+NKL +LP  IG   +L++L    NL+E +P+ V  +  L+ L L  N +  
Sbjct: 199 GLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTY 258

Query: 267 LPS-NLLKDCKALH 278
           LP    L   K LH
Sbjct: 259 LPELPFLTKLKELH 271

BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT5G07910.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-105
Identity = 190/261 (72.80%), Postives = 227/261 (86.97%), Query Frame = 0

Query: 69  MGCYSSKNA-DSKASRVARWQSTGIVALRDSKLKTFPDEVLDLDRSVRTLDLTHNKIVDI 128
           MGC +S  A  SKA+R++RW+STGIV LRDSKLKTFPDEV++++R+VRTLDLTHNKI D+
Sbjct: 1   MGCCASNTAGGSKANRISRWRSTGIVGLRDSKLKTFPDEVIEMERAVRTLDLTHNKIADV 60

Query: 129 PMEVCKLINMQRLILADNLIERLPMNLGKLQSLKVMMLDGNQITALPDELGQLVRLERLS 188
           P E+ KLINMQRL++ADNL+ERLP NLGKLQSLKV+MLDGN+I+ LPDELGQLVRLE+LS
Sbjct: 61  PGEISKLINMQRLLIADNLVERLPGNLGKLQSLKVLMLDGNRISCLPDELGQLVRLEQLS 120

Query: 189 VSRNLLSSLPETIGSLRNLFLINVSNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVC 248
           +SRN+L  LP+TIGSLRNL L+NVSNN+LKSLPES+GSC SLEE+QANDN++E LP+ +C
Sbjct: 121 ISRNMLIYLPDTIGSLRNLLLLNVSNNRLKSLPESVGSCASLEEVQANDNVVEELPASLC 180

Query: 249 NLIHLKSLCLDNNNIGQLPSNLLKDCKALHNVSLHGNPIIMDQFQQMEGFDEFEGRRKKK 308
           NLI LKSL LDNN + Q+P  LL  CK+L N+SLH NPI MDQFQ MEG+ +FE RRKKK
Sbjct: 181 NLIQLKSLSLDNNQVNQIPDGLLIHCKSLQNLSLHNNPISMDQFQLMEGYQDFEERRKKK 240

Query: 309 FDKQIDSNVMISSKGLDEGVD 329
           FDKQIDSNVM+ SK LD GVD
Sbjct: 241 FDKQIDSNVMMGSKALDVGVD 261

BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT2G30105.1 (CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT5G07910.1). )

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-41
Identity = 95/250 (38.00%), Postives = 144/250 (57.60%), Query Frame = 0

Query: 82  SRVARWQSTGIVALRDSKLKTFPDEVLDLDRSVRTLDLTHNKIVDIPMEVCKLINMQRLI 141
           +R  RW++TG++AL  + LK  P+EV D    VR LD++ N I ++P ++    +MQ+L 
Sbjct: 116 NRTDRWKATGVIALAQANLKEIPEEVWDCGSGVRVLDISENFIKEVPAKISSFGSMQKLF 175

Query: 142 LADNLIERLPMNLGKLQSLKVMML---DGNQITALPDELGQLVRLERLSVSRNLLSSLPE 201
           L  N +    +    + SLK +ML     N +T LP  +G L  L +L V+ N L+SLP 
Sbjct: 176 LQGNGLSDESIQWEGIASLKRLMLLSISHNNLTVLPSAMGSLTSLRQLDVTNNKLTSLPN 235

Query: 202 TIGSLRNLFLINVSNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLD 261
            +G L  L ++  +NN++ SLPESIG+C  L E+  + N++  LP     L +LK+L L+
Sbjct: 236 ELGLLTQLEILKANNNRITSLPESIGNCSFLMEVDLSANIISELPETFTKLRNLKTLELN 295

Query: 262 NNNIGQLPSNLLKDCKALHNVSLHGNPIIMDQFQQMEGFDEFEGRRKKKFDKQIDSNVMI 321
           N  +  LPS L K C  L  + LH   I ++  +Q EG+D+F+ RR+ K  KQ+D  V +
Sbjct: 296 NTGLKTLPSALFKMCLQLSTLGLHNTEITVEFLRQFEGYDDFDERRRTKHQKQLDFRV-V 355

Query: 322 SSKGLDEGVD 329
            S   DEG D
Sbjct: 356 GSGQFDEGAD 364

BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT2G17440.1 (plant intracellular ras group-related LRR 5 )

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-26
Identity = 70/171 (40.94%), Postives = 106/171 (61.99%), Query Frame = 0

Query: 99  KLKTFPDEVLDLDRSVRTLDLTHNKIVDIPMEVCKLINMQRLILADNLIERLPMNLGKLQ 158
           +L+  PD +  L   VR LDL+ N I+ +P  +  LI++ RL L  N I +LP ++G L 
Sbjct: 218 QLEWLPDSLGKLSSLVR-LDLSENCIMVLPATIGGLISLTRLDLHSNRIGQLPESIGDLL 277

Query: 159 SLKVMMLDGNQITALPDELGQLVRLERLSVSRNLLSSLPETIGSLRNLFLINVSNNKLKS 218
           +L  + L GNQ+++LP    +L+ LE L +S N LS LPE+IGSL +L  ++V  N ++ 
Sbjct: 278 NLVNLNLSGNQLSSLPSSFNRLIHLEELDLSSNSLSILPESIGSLVSLKKLDVETNNIEE 337

Query: 219 LPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLDNNNIGQLPSNL 270
           +P SI  C S+EEL+A+ N ++ LP  V  L  L+ L +  NNI QLP+ +
Sbjct: 338 IPHSISGCSSMEELRADYNRLKALPEAVGKLSTLEILTVRYNNIRQLPTTM 387

BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT4G35470.1 (plant intracellular ras group-related LRR 4 )

HSP 1 Score: 109.4 bits (272), Expect = 5.6e-24
Identity = 67/171 (39.18%), Postives = 106/171 (61.99%), Query Frame = 0

Query: 99  KLKTFPDEVLDLDRSVRTLDLTHNKIVDIPMEVCKLINMQRLILADNLIERLPMNLGKLQ 158
           +L+  PD +  L  S+ +LDL+ N IV +P  +  L ++ +L L  N I +LP ++G+L 
Sbjct: 234 QLEWLPDSLGKLS-SLTSLDLSENHIVVLPNTIGGLSSLTKLDLHSNRIGQLPESIGELL 293

Query: 159 SLKVMMLDGNQITALPDELGQLVRLERLSVSRNLLSSLPETIGSLRNLFLINVSNNKLKS 218
           +L  + L  NQ+++LP    +LVRLE L +S N L  LPE+IGSL +L  ++V  N ++ 
Sbjct: 294 NLVYLNLGSNQLSSLPSAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETNDIEE 353

Query: 219 LPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLDNNNIGQLPSNL 270
           +P SIG C SL EL+A+ N ++ LP  +  +  L+ L +  NNI QLP+ +
Sbjct: 354 IPYSIGGCSSLIELRADYNKLKALPEAIGKITTLEILSVRYNNIRQLPTTM 403

BLAST of CmaCh11G001940 vs. TAIR 10
Match: AT3G15410.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 100.1 bits (248), Expect = 3.4e-21
Identity = 61/177 (34.46%), Postives = 99/177 (55.93%), Query Frame = 0

Query: 105 DEVLDLDRSVRTLDLTHNKIVDIPMEV-------------CKLINMQRLILADNLIERLP 164
           D +L   R+  +L+L++  + D+P EV              + +++Q+LILA N IE L 
Sbjct: 2   DRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVLR 61

Query: 165 MNLGKLQSLKVMMLDGNQITALPDELGQLVRLERLSVSRNLLSSLPETIGSLRNLFLINV 224
            +L  L  L V+ +  N+++ LP  +G+L  ++ L VS N +S LPE IGS  +L  ++ 
Sbjct: 62  EDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLDC 121

Query: 225 SNNKLKSLPESIGSCFSLEELQANDNLMEGLPSPVCNLIHLKSLCLDNNNIGQLPSN 269
           S+N+LK LP+SIG C  L +L+A +N +  LP  + N   L  L ++ N +  L  N
Sbjct: 122 SSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSEN 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
B9F6553.3e-9365.52Plant intracellular Ras-group-related LRR protein 7 OS=Oryza sativa subsp. japon... [more]
Q7XDQ74.0e-4339.55Plant intracellular Ras-group-related LRR protein 8 OS=Oryza sativa subsp. japon... [more]
P0C8951.4e-4038.00LRR repeats and ubiquitin-like domain-containing protein At2g30105 OS=Arabidopsi... [more]
A6H6A41.3e-2535.92Leucine-rich repeat and IQ domain-containing protein 4 OS=Mus musculus OX=10090 ... [more]
Q5M8G43.8e-2536.60Leucine-rich repeat-containing protein 40 OS=Xenopus tropicalis OX=8364 GN=lrrc4... [more]
Match NameE-valueIdentityDescription
AT5G07910.11.7e-10572.80Leucine-rich repeat (LRR) family protein [more]
AT2G30105.11.0e-4138.00CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR00... [more]
AT2G17440.16.0e-2640.94plant intracellular ras group-related LRR 5 [more]
AT4G35470.15.6e-2439.18plant intracellular ras group-related LRR 4 [more]
AT3G15410.13.4e-2134.46Leucine-rich repeat (LRR) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 249..268
e-value: 40.0
score: 9.1
coord: 228..245
e-value: 210.0
score: 3.7
coord: 157..176
e-value: 87.0
score: 6.5
coord: 203..222
e-value: 15.0
score: 12.3
coord: 180..199
e-value: 1.3
score: 18.0
NoneNo IPR availablePANTHERPTHR45752LEUCINE-RICH REPEAT-CONTAININGcoord: 70..321
NoneNo IPR availablePANTHERPTHR45752:SF85PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 7coord: 70..321
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 91..288
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 203..226
e-value: 0.53
score: 19.3
coord: 249..272
e-value: 0.54
score: 19.3
coord: 180..202
e-value: 5.3
score: 15.5
coord: 157..179
e-value: 4.2
score: 16.3
coord: 134..156
e-value: 110.0
score: 4.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 65..299
e-value: 6.2E-46
score: 158.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 136..193
e-value: 1.6E-7
score: 30.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G001940.1CmaCh11G001940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding