CmaCh11G001670 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G001670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ubiquitin carboxyl-terminal hydrolase-related protein
Location	Cma_Chr11: 870841 .. 879796 (+)
RNA-Seq Expression	CmaCh11G001670
Synteny	CmaCh11G001670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATAATACATGTTTCTCTTCCTAATCCCTTCTTTCACCAAATCTCAGCCTTCCAGACAGAGAAACCACTCTACTTCCTTCCCTGCGTAATCCCTTGTTGCCCCTTCTCATTTCGTTGATGATCCATCCTCTTCTCCGCGACGGCGATCTCCGCCACCGGAATCTGTACCTCTACGACTCTATCACCTGCCTGTATCTTCTTCGACCTTCAATCTGCGCGTAAGTTTGTTTGCTCTTTTTTTTTGTTGTTGTTATTGTTGGTGGTGTTGTATCGGAAGGATATATAGACTTTTCTATATGCATGTCAATTGGATTTCTATAGAGTTTCTTGATGGGGCCTAAGAAGAAAATCATTGATCCGCGTTCTAAACAATCTCCTGCTGCTCGTGGAGTTGTTGTGGATGTTCCAAGCTCAGCGAACGCAGCCGACCAGAATTCAATACCTGAAAAGGCTAGTAACCACAACCAAAGTAGGATCGAGCCGGTGCTTCTCAATGGACCGGATGGGTTGTCTTATTCCACAATTAAACTCGAATGCGAGCGGGCTCTTACCGCACTTCGGCGCGGGAACCACACTAAGGCACTGAGGCTTATGAAGGAGTTGAGCTCCAGAAATGAGAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAGGGTACTATTTGTGTAAAGGTAGCGTCGATTATTGATGACCTGAATACAAAGCAGCGGCATTTGAAGAATGCGATTGAGTCTGCTCGTAAAGCAGTCCAGCTCTCACCTAACTCTATCGAGTTTTCCCATTTCTATGCAAATTTGCTGTACGAGGTTGCAAACGATGCGAAGGAGTACGAGGAGGTGGTGCAAGAGTGTGAGCGGGCCCTTGGCATTGAAAATCCAATCGATCCCGCCAAGGAAAGCTTGCAGGATGAAAAGAGTCAGAAGATACCTACTGCAGAAGCACGGATTACACATGTTCAAACTGAATTGAGGCAGTTAATTCAAAAGTCAAATATATATTCGATATCATCTTGGATGAAGAACTTGGGTAACGGGGAGGAGAAGTTTAGGTTGATTCCGATAAGAAGAGTGACAGAGGACCCAATGGAGGTGAGATTGGTTCAGGCTAGAAGGGCAAATGAAATTAAGAAGGCAACCAAAACACCCGAGGAGAGAAGAAAGGAGATTGAAGTCCGTGTTGCTGCTGCAAGGCTTTTGCAACAGAAGTGTGAGACACCTCAAATTCAAAATGAAGAAGGTAAAGTTGATCGGTCCCTAGATTCATCTTCAGGATCTGGTACAAGAGTTGGCGAGCGACGGAAACATGGCAATTTACGGAAACAGGGATCTTCAGCTGAAAGGAGGGATTTGGTTCATTCTTTTTGGAATTCCATGAGTATCGAAGCAAAGAAAGATTTGTTTAAGATCAAGATAAGTAATCTTAAGGCGCATTTTAGTTCTTCAAAGGATGCTTCGGCAAATGAAGTTATTTCAGAAGCTTTGTCCTTTTATGATGCCAATAAAACATGGAAATTTTGGGTTTGCTGCAGATGTGATGAGAAATTTGTGGATTCGGATTCCCATATGCACCATGTGGTTCAAGAGCACATGGGTAACCTTTTACCAAAAATGCAATCAATTTTGCCTCAGAATGTTGATGATGAATGGACCAAAATGATTCTTAATTGCTCCTGGAAAGCATTGGATGTTTCAGCTGCAGCTAAAATGCTCACCACTGAAACAAAATGCAAAGATTCTGAGTTGGTTGTAGATATCTTCCCACAGCATCATTCAGAATGTGATAACTATTTCAAAGATGCATGGGATTCTTCTCCAGAGAAGCATAAATATGGGGATAGTTTAAATGAATGCCGTCTTTCTGAAAAAATTACCAACAACGGATCTATGACCTATCATGAAAACCAGGGTTCTGTGGCATCATATTCCTCATCTGACAGTTTTCCTGTATCTGATGATCCTGAGCGTACAAAGCTTCTTGAGAAAATTCATGCAGTATTTGAGTTGCTTATAAGACATAAATATCTTGCTGCTAGCCATTTAAACAAGGTTATACAATTTGCAATAGATGAGCTACAGGGTCTTGCTTCTGGATCTCATCTTCTAAACCAGGGTCTGGACCAAACACCACTATGTATTTGCTTTCTAGGTGCTTCTCAGCTTAGGAAAATCCTCAAGTTTTTGCAAGAATTATCTCAGTCCTGTGGTATTGGTAGATACTCTGATAAAATTACTGGTCAAATTGAAGATTCAAAGAGTGATAAACAAGCGGTTGAAGTCAGAGAGAAAGTTGTTCTCAGTGAAGATGGATCACTTCTCCTCCTGAATAAGTGTTTGCTGTCATCTGATATCACTCATGCTGATGTTCCGGTGGCAGCTGCATATCATATGCTTGCTGCAACTGCCAAGGATCTTACTTCAAATGGGGTTCTTTCTGATGTTGACCCCTTTCTTTCCTGGATATATGCAGGTCCCTCTAGTGGGGAACAGTTGGTCTCATGGGAAAAAACAAAGGAAGAAAAGATACAGCGACGAATGGAAATTTTTCAAATGCTTGAGAAGGAATTTTACCATCTCCAGAGTCTTTGTGAGAGAAAATGTGAGCATTTGAACTACGAGGAAGCGTTGCAGTCAGTGGAGGATCTCTGCCTTGAAGAGGGCAAGAAGAGGGAAGCTTTGAATGAATTTATCCCCAAGAGTTATGAGTCAGTCCTGAGGAAGCGAAGGGAGGAGCTTATTGAGGCTGAAAATGGTGTGCTGTTAATCAGCAGTAGGTTTGAGTTAGATGCTGTAACTAATGTTTTGAAAGAAGCAGAAACTCTGAATGTCAATCAATTTGGATACCAGGAAACTTTTGCCAGCGTGTCTCCACAGTTAGGAGATCTGGAATCTGGTGAAGATGAAGAACGGAGAGCTAAGGATTATTTGCATGAAGTTGATACTTGTATAGAAGTTGCAATACAGAGACAGAAGGAACAGTTATCTATTGAGGTTTATTCATCAATTATAGATGCTTTAGATATAAAATTTTGAGATATTTGCTATTTGCTTATATTTCTTTTTATCTTGCAGATTAGCAAAATTGATGCCCGCATCATGCGAAATGTTACTGGAATGCAACAGTTGGAACTTAAGCTCGAACCTGTTTCTGCACATGATTATCAATCAATATTGTTGCCTCTTGTAAACTCATATTTGAGGGTCTGTATCTGATGGGTTAATTTTTTTCCAATATTTCTCTAGCCTTTTGGGACTAAAATGATAGATTCATAATCAACTGTAACTTTCAGGCACATTTAGAAGATTTGGCTGAAAAGGATGCCACAAAGAAGTCTGATGCTGCAAGCGAAGCATTTTTGGCCGAACTGGCACTGGATTCGAAGAAGGGTATCAGAGGAGGAACTGATAATTCAAGACATGCACATGAAAAACCAAAGGAAAAGAAAAGGAGCAAGGAGTTTAGGAAAGTCAAGGACTCTAAGGTTTGTCATTTTACTGCTAGAAGTTTAGGTTCATGATTTTGTTGTTTCTGTAACTTAGTTGTTGATGCCTAATGGTATTTTAATACTTTTACTTCTGCAGGTGGTCAGTGGTCCTGAGCAGGATGTGCTTCGTGGTCAGGCTGTCGATGGAGAGTAAGTGTTACTGTTGCCTTCCCCACTCTCTGGACCTCTAGGCATTTGTTTTGTTATAATATCACGAAGATCTGTAGTCTTCTAGCTAATTTTCTGTTATTGGTGGATGTTTGGTTAATTACTTGTTGCAGTCCCTTTCCAGTTTCTTCTGATGGTGATGCTGCAGAGGTGGATATTGCTGTTTTTGAGAATGTTGATGCTTTAAGACTACAGGAGGAAGAGCTCAGGCGCAAAATTGAGCTGGAAGCTGATGAAAGAAAGCTAGAAGAGACTTTGGAGTATCAAAGACGAATTGAGAATGAGGCTAAACAAAAGCATTTGGCTGAACTGCAAAAGAAATCTGCCCAGACAACTCATAATAATCTCGCTGGACTTGTCCCCAATGTTGAAGGTGCTGATAAACATTTCAAGCCTTCTGTGGTGGTAAATGTTCCTTACCTTCTCATTCTTCTCGTTTTGTTGGTTATTTAAATGAATCATGGAAATCCATGGTTCTACATGTATTCAACGTACAAAGCTGATAAATTAATTGAGGCTCTTATAATTTGCTATTTTAGGATAAATTGGCAGAAAATGATTTGGTTTCCGACTTGTCTGGGAATGGTCCTGCCATGCGAAATGCTTTGTCAGGTAATCAAAAGATTAGTGATATGCATTGGTTAGTTACTTTGCAGTAAGATATTGTGGTTTTTAGTGTTGGATTCATTACTCTCTTTTTCTTTAGCAGGTGTCTCCAATGTAGGAGTTATAGAGAATAGTCTGCCGTCATCTGATAGGAAGAAGGGGAGGAAAGGTAGACGACACAAGGTTTCAATCAAACCAGTAGATGGAAATCAGCCTTCACCATCTGATAAGGATAACGTAGCCTTTGACAACCAATTGACTGAACAAGTTAGATATCATGGCAATCCCCTGCAAGATAGTGGTGAGTGCATGTACTCTATTTTTAAATGCATTATTTATTTTATCCTCATTGATAACTGGAGATTGTGAATGATGGACTTGTTTTGGGTTCTATCCTTCTTAAATGATTCATAGAGAATAATGCTGTGTGCAAGTAGAAACTGTTGATAATCACAACTGATTATTTTTCATTGACCAAATGCCAAAAGTTTTTTTAATGTTGTGTTCTCTCCTGAATTTTTTTACCCTCAAGGTCTATTTGCAACGAAAGATATAGGATTCTAAGTGAAAGGAGGTTCTTTTAAGCGGAATACATTTCATTGATTTTTTCTTTAAAATTCAGGTCTATAGTCAATTTCTCCTTGCAGGATATCTTTGTGCAAGTTGTATTCTCTTGCTCATCGTTGATTATATTGAAAGTATTAGTAGACATTAAATTTTGCTATTTGTATGCCTATGCAAATCTGCAATGTGAAATCACTGTCCATCTTCTTTTTGTTTAGACTGGACTAATATTATCTTATCCTATGATTCAATCAGTTAATCCACTTCTTGAAGATAATAGTACAAAGACTTCGAGACAACATGTGGAGGATGAAGAGGAAAGATTTCAAGCTGATCTTAAGAAGGCTGTACGCCAGAGCCTTGGTTAGGCTCCCGTTGTGTCTTTTCCATTTTTGCTTTTAGTCTTCATGGTTTTAATTTGGATAATTTGTATCTTGGTAGGAAAAACTGTTAAAAAAATCACAATTTTTTTTTTACGTGATACCATTTTTCCTACAATTTTTGCCTATAAATTTGCACCTATGTTTCTGTATGCAAAAGAGCTCCATTGTCTTTCAATTATGCTTGATTAGATGGAGCCAAGGTCAATTATTTTTACGAACTTAGCTAGTGCTTATACCTCATCCCAATGCCAAAAACTTTGGCTGGTTTTCCTTCTCTCCAGGTATATGGATTCATGATATGATTGTCTCCAAATGCTCACACTATAAATTTTTTAATATCTAAAGTAATCCATTATGAGGCATTTCAACTTTTTAAATGTTAATCTTTAATTTGCTTCGACCTGGATGAATGATTAGATTTCTTGAGGTTTTCTGCATTTATGGGCGCTTATTTCTGTTTCCTTTTCTGTATAGTAACTGCAATATTTTTTAACTTTAGTTTTAACGTTTTCTCAGATGCATTTCAAGAACAGCAGAAATTACCCTTGATTATGAGTTCCAGGACACCATTGATCAGTCATGGTGAAGTAGATAGTAATGGTCTTCCATCAAATGAACGCAATGTAGAAAATGTGCAGGCAGCTGGTATGTTTGGTACAGGACTTAAGAATGAAGTTGGTGAATATAATTGCTTTTTGAATGTGATTATTCAGGTGAGCGTGTGACAAAAGAAAATTGTATATCATTTCACTTTGCTAGTTCTTTGTTCTTTCTGCATATGCAGTCTAAAATGTTGTCTTGTTCTACATGAGCTCAGTCGTTATGGCATTTAAGACGGTTTCGAGAAGAGTTCCTGAGAAGATCTATGACTGAGCATGTTCATGTTGGGGATCCCTGTGTTGTTTGTGCATTATATGAAATCTTTGCTGCCTTGAACAAGGCATCTGCAGATTCTAGAAGAGAAGCAGTCGCCCCCACCTCTTTGAGAGTAGCTCTGAGCAATCTTTGTCCTGATAGTAATTTCTTCCAAGAGGTAGTTTTGCATATCCCTGGTTTTTGATGCCTACAACTTAAAAATGAAAGAAAGGCTTAAAAAAGAAAGAAAGAAAGTGATTGGTTCTACTTTACTTAATTTCATATATAGATTATGAGAAAACCTTTAACTAATTTTTGGCGGTTGTTTAGGGTCAGATGAATGATGCCTCTGAAGTTTTGGCAGTCATATTTGATTGCCTACACCAGTCATTGACTGCTGGTTCGAGTGTTTCTGATACAGACACAGTAGAAAGCAATTGCATAGGGTCTTGGGACTGTTCAAGTGACACTTGTTTGGTACATTCCATCTTTGGAATGGACATTTTTGAACGAATGAATTGCTACAGTTGTGGCCTGGAATCTAGACATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCTAGTGCTCTTCGGACAACGAAGGTAACAGAGTCAGCCGTTCCCAGCGTTGATGACTTTTTTGGAAAGAGTATTCTGTTATTGAACGCTTTTTCTTTAATTCAATTTTCTTCACCATTCAGGTTATGTGTTCAGAAAGCTCCTTCGATGAGCTTCTGAATGTTGTTGAAATGAATCATCAGCTAGTATGTGATCAGGATGTTGGTGGATGTGGAAAACTCAATTACATTCATCACTTCCTCTCCGCACCACCACATGTATTCACAACAGGTGATTCAAATAATTTTCATCTGGATCCTCCTGCGCACCCTACTTCCCTCCTCCCATTACCCTCGATCTATTATTCATGATGTTTTACTTGTATGCAATTTGGTATTGTAGTCTTGGGCTGGCAGAAAACTTGTGAGAGTGCTGATGACATCACAGAGACATTAGCTGCTCTAAGTACTGAGATAGATGTCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAATGTCCATAATTTGGTATCAGTGGTATGTACTATTCTTTTTTAATTTGTGTGCATGTATTCTTAGGGCGGAGAAAATTTAAACTGCCAAAATATTCTACTGCGAGGCTGTTTCTCTGCATGGTCTGGAGAATGTAGGGTATGAAATTTTAATTCCTCGGAATGCATCATGGCTGTGGATTTCTAGGGTACTTAATACTCACTGATGTTCAAGACATGTCAACCACGGTTTTTGCATATTCATAGGCATTCATAGACACTCAGAACACTGGGCTTCTTGCATTACTTTCCTGTTGAGATGGGACATGGATTCTGTTCAATTTGATGCATTTTAATTGTGTTATTATTCTTTCTTAATCTTTTTTGACTAGTGATATTATTCTTAACGTGTTTATCTGCATTTTGTTTTTCATTAAGCATATTTTGCACACAGAAAACAATAATCTAGCATCTCCATACACCAACATTCATCTAACATTTTAAGACAACCAGAAGTTTATTATTATGCATGACATGATCCTCTCTCGCAACTCTTAATAATTGAATTAGAGGACGTCTTGAGGTTTTAACGTAAGGAAGTTAGGTTTGGATGTTAGTTTTGGTGCAAGGCCTTAAATTAATCATCTTTAAGCATAGCCATTGTCTTGCTAAGAAATCAACATTGACCATTTCCCTTTGACATGGAGGGGTTAGTATTGGTGCTTGTGGAGTAGATGTTTGTCCGTATGTCATCTTTAAATATGTTTGTGTTCATTGTGGATTTTCCAAAATATAGATTTTCAGTTTACTGAATAGTCAGTTCTCTAATATGCTCCTAACTTTGTAGGTTTGCTATTATGGTCAACACTATCATTGTTTTGCGTACAGTTGTGACAAGAAATGCTGGATAATGTATGATGATAGAACCGTTAAGGTAAGTTCTTACTTTCCCCTTCCTCATTTCCCTTTATAGGGTGTGTGTTCTAGTTTCTCTTATGTGACATAAACTGCGCTCATGCGTAGGTAATTGGTGGCTGGGCTGATGTTCTTACCATGTGTGAAAAAGGACACTTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAATTAGCAATATTTTGGAACTGTCTCGTTAGTCATACTGGTGGAGCGTAGTGGTTTACATTTGATTTCTGCCATGGCGAGTTGTTTATAAGGAAGACTTGCCTTGTACGCTCATGGAATTCAAACAGTACGTGTAATATCGGTTTCAAAAGAAAAATTTTGGTCGGGTCCTAACATGATAATCTCTTTGAGTTTTCTGATACAATCAATTTTTTTTTGGAGAAGATCTGGTCCTCAAGGAGAGTATTGTAAGTACGATAGATTTTCTTCTAAATTGAGGGAGCCAGATGGTTGGAGACACCCAGGTTTCTGCTTCTGTTATTCCTTCTTTGCTTTGATCCTTTAAATAAGGTTGTCAAATAAGGTTAAGGAATGGGGTGGTATTAAATGGGTGGATTTTGTGATATCTACTACTTGGGGGAGGTTTTATAGCTGTGTATCATAAGAGGTAATGATTTCTGGTTGCCGAGAAGAGATCGACCAACATAGCGAACAGTCGAGACAGAGTCTAGTTAGAGACAATGCTAGATGCTTTTCATCTTCCTCATTTACTCTTCTGCAGTTCTAGATGTGTTGTATAGTTCCAATTAAAGTAACTTGGCCTCTGCCTATGTTCACTCTAAAGTGCAATTGTTTTGTCATCCAGAATTTGGTGATCGACATGAGCCGCAATCTTCTAGTGTCCTTACTCTAAAGTAAATAAGTGGAGACTATGTTCACTTGGCCTCTGCCTATGTTCAC

mRNA sequence

TTTAATAATACATGTTTCTCTTCCTAATCCCTTCTTTCACCAAATCTCAGCCTTCCAGACAGAGAAACCACTCTACTTCCTTCCCTGCGTAATCCCTTGTTGCCCCTTCTCATTTCGTTGATGATCCATCCTCTTCTCCGCGACGGCGATCTCCGCCACCGGAATCTGTACCTCTACGACTCTATCACCTGCCTGTATCTTCTTCGACCTTCAATCTGCGCAGTTTCTTGATGGGGCCTAAGAAGAAAATCATTGATCCGCGTTCTAAACAATCTCCTGCTGCTCGTGGAGTTGTTGTGGATGTTCCAAGCTCAGCGAACGCAGCCGACCAGAATTCAATACCTGAAAAGGCTAGTAACCACAACCAAAGTAGGATCGAGCCGGTGCTTCTCAATGGACCGGATGGGTTGTCTTATTCCACAATTAAACTCGAATGCGAGCGGGCTCTTACCGCACTTCGGCGCGGGAACCACACTAAGGCACTGAGGCTTATGAAGGAGTTGAGCTCCAGAAATGAGAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAGGGTACTATTTGTGTAAAGGTAGCGTCGATTATTGATGACCTGAATACAAAGCAGCGGCATTTGAAGAATGCGATTGAGTCTGCTCGTAAAGCAGTCCAGCTCTCACCTAACTCTATCGAGTTTTCCCATTTCTATGCAAATTTGCTGTACGAGGTTGCAAACGATGCGAAGGAGTACGAGGAGGTGGTGCAAGAGTGTGAGCGGGCCCTTGGCATTGAAAATCCAATCGATCCCGCCAAGGAAAGCTTGCAGGATGAAAAGAGTCAGAAGATACCTACTGCAGAAGCACGGATTACACATGTTCAAACTGAATTGAGGCAGTTAATTCAAAAGTCAAATATATATTCGATATCATCTTGGATGAAGAACTTGGGTAACGGGGAGGAGAAGTTTAGGTTGATTCCGATAAGAAGAGTGACAGAGGACCCAATGGAGGTGAGATTGGTTCAGGCTAGAAGGGCAAATGAAATTAAGAAGGCAACCAAAACACCCGAGGAGAGAAGAAAGGAGATTGAAGTCCGTGTTGCTGCTGCAAGGCTTTTGCAACAGAAGTGTGAGACACCTCAAATTCAAAATGAAGAAGGTAAAGTTGATCGGTCCCTAGATTCATCTTCAGGATCTGGTACAAGAGTTGGCGAGCGACGGAAACATGGCAATTTACGGAAACAGGGATCTTCAGCTGAAAGGAGGGATTTGGTTCATTCTTTTTGGAATTCCATGAGTATCGAAGCAAAGAAAGATTTGTTTAAGATCAAGATAAGTAATCTTAAGGCGCATTTTAGTTCTTCAAAGGATGCTTCGGCAAATGAAGTTATTTCAGAAGCTTTGTCCTTTTATGATGCCAATAAAACATGGAAATTTTGGGTTTGCTGCAGATGTGATGAGAAATTTGTGGATTCGGATTCCCATATGCACCATGTGGTTCAAGAGCACATGGGTAACCTTTTACCAAAAATGCAATCAATTTTGCCTCAGAATGTTGATGATGAATGGACCAAAATGATTCTTAATTGCTCCTGGAAAGCATTGGATGTTTCAGCTGCAGCTAAAATGCTCACCACTGAAACAAAATGCAAAGATTCTGAGTTGGTTGTAGATATCTTCCCACAGCATCATTCAGAATGTGATAACTATTTCAAAGATGCATGGGATTCTTCTCCAGAGAAGCATAAATATGGGGATAGTTTAAATGAATGCCGTCTTTCTGAAAAAATTACCAACAACGGATCTATGACCTATCATGAAAACCAGGGTTCTGTGGCATCATATTCCTCATCTGACAGTTTTCCTGTATCTGATGATCCTGAGCGTACAAAGCTTCTTGAGAAAATTCATGCAGTATTTGAGTTGCTTATAAGACATAAATATCTTGCTGCTAGCCATTTAAACAAGGTTATACAATTTGCAATAGATGAGCTACAGGGTCTTGCTTCTGGATCTCATCTTCTAAACCAGGGTCTGGACCAAACACCACTATGTATTTGCTTTCTAGGTGCTTCTCAGCTTAGGAAAATCCTCAAGTTTTTGCAAGAATTATCTCAGTCCTGTGGTATTGGTAGATACTCTGATAAAATTACTGGTCAAATTGAAGATTCAAAGAGTGATAAACAAGCGGTTGAAGTCAGAGAGAAAGTTGTTCTCAGTGAAGATGGATCACTTCTCCTCCTGAATAAGTGTTTGCTGTCATCTGATATCACTCATGCTGATGTTCCGGTGGCAGCTGCATATCATATGCTTGCTGCAACTGCCAAGGATCTTACTTCAAATGGGGTTCTTTCTGATGTTGACCCCTTTCTTTCCTGGATATATGCAGGTCCCTCTAGTGGGGAACAGTTGGTCTCATGGGAAAAAACAAAGGAAGAAAAGATACAGCGACGAATGGAAATTTTTCAAATGCTTGAGAAGGAATTTTACCATCTCCAGAGTCTTTGTGAGAGAAAATGTGAGCATTTGAACTACGAGGAAGCGTTGCAGTCAGTGGAGGATCTCTGCCTTGAAGAGGGCAAGAAGAGGGAAGCTTTGAATGAATTTATCCCCAAGAGTTATGAGTCAGTCCTGAGGAAGCGAAGGGAGGAGCTTATTGAGGCTGAAAATGGTGTGCTGTTAATCAGCAGTAGGTTTGAGTTAGATGCTGTAACTAATGTTTTGAAAGAAGCAGAAACTCTGAATGTCAATCAATTTGGATACCAGGAAACTTTTGCCAGCGTGTCTCCACAGTTAGGAGATCTGGAATCTGGTGAAGATGAAGAACGGAGAGCTAAGGATTATTTGCATGAAGTTGATACTTGTATAGAAGTTGCAATACAGAGACAGAAGGAACAGTTATCTATTGAGATTAGCAAAATTGATGCCCGCATCATGCGAAATGTTACTGGAATGCAACAGTTGGAACTTAAGCTCGAACCTGTTTCTGCACATGATTATCAATCAATATTGTTGCCTCTTGTAAACTCATATTTGAGGGCACATTTAGAAGATTTGGCTGAAAAGGATGCCACAAAGAAGTCTGATGCTGCAAGCGAAGCATTTTTGGCCGAACTGGCACTGGATTCGAAGAAGGGTATCAGAGGAGGAACTGATAATTCAAGACATGCACATGAAAAACCAAAGGAAAAGAAAAGGAGCAAGGAGTTTAGGAAAGTCAAGGACTCTAAGGTGGTCAGTGGTCCTGAGCAGGATGTGCTTCGTGGTCAGGCTGTCGATGGAGATCCCTTTCCAGTTTCTTCTGATGGTGATGCTGCAGAGGTGGATATTGCTGTTTTTGAGAATGTTGATGCTTTAAGACTACAGGAGGAAGAGCTCAGGCGCAAAATTGAGCTGGAAGCTGATGAAAGAAAGCTAGAAGAGACTTTGGAGTATCAAAGACGAATTGAGAATGAGGCTAAACAAAAGCATTTGGCTGAACTGCAAAAGAAATCTGCCCAGACAACTCATAATAATCTCGCTGGACTTGTCCCCAATGTTGAAGGTGCTGATAAACATTTCAAGCCTTCTGTGGTGGATAAATTGGCAGAAAATGATTTGGTTTCCGACTTGTCTGGGAATGGTCCTGCCATGCGAAATGCTTTGTCAGGTGTCTCCAATGTAGGAGTTATAGAGAATAGTCTGCCGTCATCTGATAGGAAGAAGGGGAGGAAAGGTAGACGACACAAGGTTTCAATCAAACCAGTAGATGGAAATCAGCCTTCACCATCTGATAAGGATAACGTAGCCTTTGACAACCAATTGACTGAACAAGTTAGATATCATGGCAATCCCCTGCAAGATAGTGTTAATCCACTTCTTGAAGATAATAGTACAAAGACTTCGAGACAACATGTGGAGGATGAAGAGGAAAGATTTCAAGCTGATCTTAAGAAGGCTGTACGCCAGAGCCTTGATGCATTTCAAGAACAGCAGAAATTACCCTTGATTATGAGTTCCAGGACACCATTGATCAGTCATGGTGAAGTAGATAGTAATGGTCTTCCATCAAATGAACGCAATGTAGAAAATGTGCAGGCAGCTGGTATGTTTGGTACAGGACTTAAGAATGAAGTTGGTGAATATAATTGCTTTTTGAATGTGATTATTCAGTCGTTATGGCATTTAAGACGGTTTCGAGAAGAGTTCCTGAGAAGATCTATGACTGAGCATGTTCATGTTGGGGATCCCTGTGTTGTTTGTGCATTATATGAAATCTTTGCTGCCTTGAACAAGGCATCTGCAGATTCTAGAAGAGAAGCAGTCGCCCCCACCTCTTTGAGAGTAGCTCTGAGCAATCTTTGTCCTGATAGTAATTTCTTCCAAGAGGGTCAGATGAATGATGCCTCTGAAGTTTTGGCAGTCATATTTGATTGCCTACACCAGTCATTGACTGCTGGTTCGAGTGTTTCTGATACAGACACAGTAGAAAGCAATTGCATAGGGTCTTGGGACTGTTCAAGTGACACTTGTTTGGTACATTCCATCTTTGGAATGGACATTTTTGAACGAATGAATTGCTACAGTTGTGGCCTGGAATCTAGACATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCTAGTGCTCTTCGGACAACGAAGGTTATGTGTTCAGAAAGCTCCTTCGATGAGCTTCTGAATGTTGTTGAAATGAATCATCAGCTAGTATGTGATCAGGATGTTGGTGGATGTGGAAAACTCAATTACATTCATCACTTCCTCTCCGCACCACCACATGTATTCACAACAGTCTTGGGCTGGCAGAAAACTTGTGAGAGTGCTGATGACATCACAGAGACATTAGCTGCTCTAAGTACTGAGATAGATGTCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAATGTCCATAATTTGGTATCAGTGGTTTGCTATTATGGTCAACACTATCATTGTTTTGCGTACAGTTGTGACAAGAAATGCTGGATAATGTATGATGATAGAACCGTTAAGGTAATTGGTGGCTGGGCTGATGTTCTTACCATGTGTGAAAAAGGACACTTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAATTAGCAATATTTTGGAACTGTCTCGTTAGTCATACTGGTGGAGCGTAGTGGTTTACATTTGATTTCTGCCATGGCGAGTTGTTTATAAGGAAGACTTGCCTTGTACGCTCATGGAATTCAAACAGTACGTGTAATATCGGTTTCAAAAGAAAAATTTTGGTCGGGTCCTAACATGATAATCTCTTTGAGTTTTCTGATACAATCAATTTTTTTTTGGAGAAGATCTGGTCCTCAAGGAGAGTATTGTAAGTACGATAGATTTTCTTCTAAATTGAGGGAGCCAGATGGTTGGAGACACCCAGGTTTCTGCTTCTGTTATTCCTTCTTTGCTTTGATCCTTTAAATAAGGTTGTCAAATAAGGTTAAGGAATGGGGTGGTATTAAATGGGTGGATTTTGTGATATCTACTACTTGGGGGAGGTTTTATAGCTGTGTATCATAAGAGGTAATGATTTCTGGTTGCCGAGAAGAGATCGACCAACATAGCGAACAGTCGAGACAGAGTCTAGTTAGAGACAATGCTAGATGCTTTTCATCTTCCTCATTTACTCTTCTGCAGTTCTAGATGTGTTGTATAGTTCCAATTAAAGTAACTTGGCCTCTGCCTATGTTCACTCTAAAGTGCAATTGTTTTGTCATCCAGAATTTGGTGATCGACATGAGCCGCAATCTTCTAGTGTCCTTACTCTAAAGTAAATAAGTGGAGACTATGTTCACTTGGCCTCTGCCTATGTTCAC

Coding sequence (CDS)

ATGGGGCCTAAGAAGAAAATCATTGATCCGCGTTCTAAACAATCTCCTGCTGCTCGTGGAGTTGTTGTGGATGTTCCAAGCTCAGCGAACGCAGCCGACCAGAATTCAATACCTGAAAAGGCTAGTAACCACAACCAAAGTAGGATCGAGCCGGTGCTTCTCAATGGACCGGATGGGTTGTCTTATTCCACAATTAAACTCGAATGCGAGCGGGCTCTTACCGCACTTCGGCGCGGGAACCACACTAAGGCACTGAGGCTTATGAAGGAGTTGAGCTCCAGAAATGAGAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAGGGTACTATTTGTGTAAAGGTAGCGTCGATTATTGATGACCTGAATACAAAGCAGCGGCATTTGAAGAATGCGATTGAGTCTGCTCGTAAAGCAGTCCAGCTCTCACCTAACTCTATCGAGTTTTCCCATTTCTATGCAAATTTGCTGTACGAGGTTGCAAACGATGCGAAGGAGTACGAGGAGGTGGTGCAAGAGTGTGAGCGGGCCCTTGGCATTGAAAATCCAATCGATCCCGCCAAGGAAAGCTTGCAGGATGAAAAGAGTCAGAAGATACCTACTGCAGAAGCACGGATTACACATGTTCAAACTGAATTGAGGCAGTTAATTCAAAAGTCAAATATATATTCGATATCATCTTGGATGAAGAACTTGGGTAACGGGGAGGAGAAGTTTAGGTTGATTCCGATAAGAAGAGTGACAGAGGACCCAATGGAGGTGAGATTGGTTCAGGCTAGAAGGGCAAATGAAATTAAGAAGGCAACCAAAACACCCGAGGAGAGAAGAAAGGAGATTGAAGTCCGTGTTGCTGCTGCAAGGCTTTTGCAACAGAAGTGTGAGACACCTCAAATTCAAAATGAAGAAGGTAAAGTTGATCGGTCCCTAGATTCATCTTCAGGATCTGGTACAAGAGTTGGCGAGCGACGGAAACATGGCAATTTACGGAAACAGGGATCTTCAGCTGAAAGGAGGGATTTGGTTCATTCTTTTTGGAATTCCATGAGTATCGAAGCAAAGAAAGATTTGTTTAAGATCAAGATAAGTAATCTTAAGGCGCATTTTAGTTCTTCAAAGGATGCTTCGGCAAATGAAGTTATTTCAGAAGCTTTGTCCTTTTATGATGCCAATAAAACATGGAAATTTTGGGTTTGCTGCAGATGTGATGAGAAATTTGTGGATTCGGATTCCCATATGCACCATGTGGTTCAAGAGCACATGGGTAACCTTTTACCAAAAATGCAATCAATTTTGCCTCAGAATGTTGATGATGAATGGACCAAAATGATTCTTAATTGCTCCTGGAAAGCATTGGATGTTTCAGCTGCAGCTAAAATGCTCACCACTGAAACAAAATGCAAAGATTCTGAGTTGGTTGTAGATATCTTCCCACAGCATCATTCAGAATGTGATAACTATTTCAAAGATGCATGGGATTCTTCTCCAGAGAAGCATAAATATGGGGATAGTTTAAATGAATGCCGTCTTTCTGAAAAAATTACCAACAACGGATCTATGACCTATCATGAAAACCAGGGTTCTGTGGCATCATATTCCTCATCTGACAGTTTTCCTGTATCTGATGATCCTGAGCGTACAAAGCTTCTTGAGAAAATTCATGCAGTATTTGAGTTGCTTATAAGACATAAATATCTTGCTGCTAGCCATTTAAACAAGGTTATACAATTTGCAATAGATGAGCTACAGGGTCTTGCTTCTGGATCTCATCTTCTAAACCAGGGTCTGGACCAAACACCACTATGTATTTGCTTTCTAGGTGCTTCTCAGCTTAGGAAAATCCTCAAGTTTTTGCAAGAATTATCTCAGTCCTGTGGTATTGGTAGATACTCTGATAAAATTACTGGTCAAATTGAAGATTCAAAGAGTGATAAACAAGCGGTTGAAGTCAGAGAGAAAGTTGTTCTCAGTGAAGATGGATCACTTCTCCTCCTGAATAAGTGTTTGCTGTCATCTGATATCACTCATGCTGATGTTCCGGTGGCAGCTGCATATCATATGCTTGCTGCAACTGCCAAGGATCTTACTTCAAATGGGGTTCTTTCTGATGTTGACCCCTTTCTTTCCTGGATATATGCAGGTCCCTCTAGTGGGGAACAGTTGGTCTCATGGGAAAAAACAAAGGAAGAAAAGATACAGCGACGAATGGAAATTTTTCAAATGCTTGAGAAGGAATTTTACCATCTCCAGAGTCTTTGTGAGAGAAAATGTGAGCATTTGAACTACGAGGAAGCGTTGCAGTCAGTGGAGGATCTCTGCCTTGAAGAGGGCAAGAAGAGGGAAGCTTTGAATGAATTTATCCCCAAGAGTTATGAGTCAGTCCTGAGGAAGCGAAGGGAGGAGCTTATTGAGGCTGAAAATGGTGTGCTGTTAATCAGCAGTAGGTTTGAGTTAGATGCTGTAACTAATGTTTTGAAAGAAGCAGAAACTCTGAATGTCAATCAATTTGGATACCAGGAAACTTTTGCCAGCGTGTCTCCACAGTTAGGAGATCTGGAATCTGGTGAAGATGAAGAACGGAGAGCTAAGGATTATTTGCATGAAGTTGATACTTGTATAGAAGTTGCAATACAGAGACAGAAGGAACAGTTATCTATTGAGATTAGCAAAATTGATGCCCGCATCATGCGAAATGTTACTGGAATGCAACAGTTGGAACTTAAGCTCGAACCTGTTTCTGCACATGATTATCAATCAATATTGTTGCCTCTTGTAAACTCATATTTGAGGGCACATTTAGAAGATTTGGCTGAAAAGGATGCCACAAAGAAGTCTGATGCTGCAAGCGAAGCATTTTTGGCCGAACTGGCACTGGATTCGAAGAAGGGTATCAGAGGAGGAACTGATAATTCAAGACATGCACATGAAAAACCAAAGGAAAAGAAAAGGAGCAAGGAGTTTAGGAAAGTCAAGGACTCTAAGGTGGTCAGTGGTCCTGAGCAGGATGTGCTTCGTGGTCAGGCTGTCGATGGAGATCCCTTTCCAGTTTCTTCTGATGGTGATGCTGCAGAGGTGGATATTGCTGTTTTTGAGAATGTTGATGCTTTAAGACTACAGGAGGAAGAGCTCAGGCGCAAAATTGAGCTGGAAGCTGATGAAAGAAAGCTAGAAGAGACTTTGGAGTATCAAAGACGAATTGAGAATGAGGCTAAACAAAAGCATTTGGCTGAACTGCAAAAGAAATCTGCCCAGACAACTCATAATAATCTCGCTGGACTTGTCCCCAATGTTGAAGGTGCTGATAAACATTTCAAGCCTTCTGTGGTGGATAAATTGGCAGAAAATGATTTGGTTTCCGACTTGTCTGGGAATGGTCCTGCCATGCGAAATGCTTTGTCAGGTGTCTCCAATGTAGGAGTTATAGAGAATAGTCTGCCGTCATCTGATAGGAAGAAGGGGAGGAAAGGTAGACGACACAAGGTTTCAATCAAACCAGTAGATGGAAATCAGCCTTCACCATCTGATAAGGATAACGTAGCCTTTGACAACCAATTGACTGAACAAGTTAGATATCATGGCAATCCCCTGCAAGATAGTGTTAATCCACTTCTTGAAGATAATAGTACAAAGACTTCGAGACAACATGTGGAGGATGAAGAGGAAAGATTTCAAGCTGATCTTAAGAAGGCTGTACGCCAGAGCCTTGATGCATTTCAAGAACAGCAGAAATTACCCTTGATTATGAGTTCCAGGACACCATTGATCAGTCATGGTGAAGTAGATAGTAATGGTCTTCCATCAAATGAACGCAATGTAGAAAATGTGCAGGCAGCTGGTATGTTTGGTACAGGACTTAAGAATGAAGTTGGTGAATATAATTGCTTTTTGAATGTGATTATTCAGTCGTTATGGCATTTAAGACGGTTTCGAGAAGAGTTCCTGAGAAGATCTATGACTGAGCATGTTCATGTTGGGGATCCCTGTGTTGTTTGTGCATTATATGAAATCTTTGCTGCCTTGAACAAGGCATCTGCAGATTCTAGAAGAGAAGCAGTCGCCCCCACCTCTTTGAGAGTAGCTCTGAGCAATCTTTGTCCTGATAGTAATTTCTTCCAAGAGGGTCAGATGAATGATGCCTCTGAAGTTTTGGCAGTCATATTTGATTGCCTACACCAGTCATTGACTGCTGGTTCGAGTGTTTCTGATACAGACACAGTAGAAAGCAATTGCATAGGGTCTTGGGACTGTTCAAGTGACACTTGTTTGGTACATTCCATCTTTGGAATGGACATTTTTGAACGAATGAATTGCTACAGTTGTGGCCTGGAATCTAGACATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCTAGTGCTCTTCGGACAACGAAGGTTATGTGTTCAGAAAGCTCCTTCGATGAGCTTCTGAATGTTGTTGAAATGAATCATCAGCTAGTATGTGATCAGGATGTTGGTGGATGTGGAAAACTCAATTACATTCATCACTTCCTCTCCGCACCACCACATGTATTCACAACAGTCTTGGGCTGGCAGAAAACTTGTGAGAGTGCTGATGACATCACAGAGACATTAGCTGCTCTAAGTACTGAGATAGATGTCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAATGTCCATAATTTGGTATCAGTGGTTTGCTATTATGGTCAACACTATCATTGTTTTGCGTACAGTTGTGACAAGAAATGCTGGATAATGTATGATGATAGAACCGTTAAGGTAATTGGTGGCTGGGCTGATGTTCTTACCATGTGTGAAAAAGGACACTTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAATTAG

Protein sequence

MGPKKKIIDPRSKQSPAARGVVVDVPSSANAADQNSIPEKASNHNQSRIEPVLLNGPDGLSYSTIKLECERALTALRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTICVKVASIIDDLNTKQRHLKNAIESARKAVQLSPNSIEFSHFYANLLYEVANDAKEYEEVVQECERALGIENPIDPAKESLQDEKSQKIPTAEARITHVQTELRQLIQKSNIYSISSWMKNLGNGEEKFRLIPIRRVTEDPMEVRLVQARRANEIKKATKTPEERRKEIEVRVAAARLLQQKCETPQIQNEEGKVDRSLDSSSGSGTRVGERRKHGNLRKQGSSAERRDLVHSFWNSMSIEAKKDLFKIKISNLKAHFSSSKDASANEVISEALSFYDANKTWKFWVCCRCDEKFVDSDSHMHHVVQEHMGNLLPKMQSILPQNVDDEWTKMILNCSWKALDVSAAAKMLTTETKCKDSELVVDIFPQHHSECDNYFKDAWDSSPEKHKYGDSLNECRLSEKITNNGSMTYHENQGSVASYSSSDSFPVSDDPERTKLLEKIHAVFELLIRHKYLAASHLNKVIQFAIDELQGLASGSHLLNQGLDQTPLCICFLGASQLRKILKFLQELSQSCGIGRYSDKITGQIEDSKSDKQAVEVREKVVLSEDGSLLLLNKCLLSSDITHADVPVAAAYHMLAATAKDLTSNGVLSDVDPFLSWIYAGPSSGEQLVSWEKTKEEKIQRRMEIFQMLEKEFYHLQSLCERKCEHLNYEEALQSVEDLCLEEGKKREALNEFIPKSYESVLRKRREELIEAENGVLLISSRFELDAVTNVLKEAETLNVNQFGYQETFASVSPQLGDLESGEDEERRAKDYLHEVDTCIEVAIQRQKEQLSIEISKIDARIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDATKKSDAASEAFLAELALDSKKGIRGGTDNSRHAHEKPKEKKRSKEFRKVKDSKVVSGPEQDVLRGQAVDGDPFPVSSDGDAAEVDIAVFENVDALRLQEEELRRKIELEADERKLEETLEYQRRIENEAKQKHLAELQKKSAQTTHNNLAGLVPNVEGADKHFKPSVVDKLAENDLVSDLSGNGPAMRNALSGVSNVGVIENSLPSSDRKKGRKGRRHKVSIKPVDGNQPSPSDKDNVAFDNQLTEQVRYHGNPLQDSVNPLLEDNSTKTSRQHVEDEEERFQADLKKAVRQSLDAFQEQQKLPLIMSSRTPLISHGEVDSNGLPSNERNVENVQAAGMFGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKASADSRREAVAPTSLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTAGSSVSDTDTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTTKVMCSESSFDELLNVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFTTVLGWQKTCESADDITETLAALSTEIDVSVLYRGLDPKNVHNLVSVVCYYGQHYHCFAYSCDKKCWIMYDDRTVKVIGGWADVLTMCEKGHLQPQVLFFEAVN

Homology

[Close]

BLAST of CmaCh11G001670 vs. ExPASy Swiss-Prot
Match: Q8BL06 (Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Mus musculus OX=10090 GN=Usp54 PE=1 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 7.3e-37
Identity = 115/344 (33.43%), Postives = 164/344 (47.67%), Query Frame = 0


Query: 1283 GLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKA 1342
            GL NE G+ +CFLN  +Q LWHL  FR  F  R +T H  +GD C+ CAL  IF     +
Sbjct: 32   GLSNEPGQNSCFLNSALQVLWHLDIFRRSF--RQLTTHKCMGDSCIFCALKGIFNQFQCS 91

Query: 1343 SADSRREAVAPT-SLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTAGSSVSD 1402
            S     E V P+ +LR AL+    D   FQ G M+DA+E    +   +H  + A  +  D
Sbjct: 92   S-----EKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHI-ADETKED 151

Query: 1403 TDTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALR 1462
                         C++  C+ H  F M +FE+  C SCG  S  L +    H I+ +AL 
Sbjct: 152  I------------CTAQHCISHQKFAMTLFEQCVCSSCGATSDPLPFIQMVHYISTTAL- 211

Query: 1463 TTKVMC--------SESSFDELL-NVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFT 1522
              + +C        S S F ELL N   M     C  +   CG+   I   L   P + T
Sbjct: 212  CNQAICMLEKREKPSPSMFGELLQNASTMGDLRNCPSN---CGERIRIRRVLMNAPQIIT 271

Query: 1523 TVLGWQKTCESADDITETLAALSTEIDV-SVLYRGLDPKNVHN---LVSVVCYYGQHYHC 1582
              L W    E +D   + + +L T + +  + +R  D +   +   LV ++CYYG+HY  
Sbjct: 272  IGLVWDS--EHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKQSELYLVGMICYYGKHYST 331

Query: 1583 FAYSCDKKCWIMYDDRTVKVIG-GWADVLTMCEKGHLQPQVLFF 1612
            F +    + W+ +DD  VK IG  W DV+T C KGH QP +L +
Sbjct: 332  FFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLY 349

[Close]

BLAST of CmaCh11G001670 vs. ExPASy Swiss-Prot
Match: Q70EL1 (Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Homo sapiens OX=9606 GN=USP54 PE=1 SV=4)

HSP 1 Score: 156.0 bits (393), Expect = 3.6e-36
Identity = 113/344 (32.85%), Postives = 164/344 (47.67%), Query Frame = 0


Query: 1283 GLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKA 1342
            GL NE G+ +CFLN  +Q LWHL  FR  F  R +T H  +GD C+ CAL  IF     +
Sbjct: 32   GLSNEPGQNSCFLNSALQVLWHLDIFRRSF--RQLTTHKCMGDSCIFCALKGIFNQFQCS 91

Query: 1343 SADSRREAVAPT-SLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTAGSSVSD 1402
            S     E V P+ +LR AL+    D   FQ G M+DA+E    +   +H  + A  +  D
Sbjct: 92   S-----EKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHI-ADETKED 151

Query: 1403 TDTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALR 1462
                         C++  C+ H  F M +FE+  C SCG  S  L +    H I+ ++L 
Sbjct: 152  I------------CTAQHCISHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSL- 211

Query: 1463 TTKVMC--------SESSFDELL-NVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFT 1522
              + +C        S S F ELL N   M     C  +   CG+   I   L   P + T
Sbjct: 212  CNQAICMLERREKPSPSMFGELLQNASTMGDLRNCPSN---CGERIRIRRVLMNAPQIIT 271

Query: 1523 TVLGWQKTCESADDITETLAALSTEIDV-SVLYRGLDPKNVHN---LVSVVCYYGQHYHC 1582
              L W    + +D   + + +L T + +  + +R  D +   +   LV ++CYYG+HY  
Sbjct: 272  IGLVWDS--DHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKQSELYLVGMICYYGKHYST 331

Query: 1583 FAYSCDKKCWIMYDDRTVKVIG-GWADVLTMCEKGHLQPQVLFF 1612
            F +    + W+ +DD  VK IG  W DV+T C KGH QP +L +
Sbjct: 332  FFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLY 349

[Close]

BLAST of CmaCh11G001670 vs. ExPASy Swiss-Prot
Match: Q70EK8 (Inactive ubiquitin carboxyl-terminal hydrolase 53 OS=Homo sapiens OX=9606 GN=USP53 PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 6.2e-36
Identity = 109/342 (31.87%), Postives = 155/342 (45.32%), Query Frame = 0


Query: 1283 GLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKA 1342
            GL NE G+ +CFLN  +Q LW L  FR     R +T HV  GD C+ CAL  IFA     
Sbjct: 31   GLLNEPGQNSCFLNSAVQVLWQLDIFRRSL--RVLTGHVCQGDACIFCALKTIFAQFQ-- 90

Query: 1343 SADSRREAVAPTSLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTAGSSVSDT 1402
               SR +A+   ++R AL+    D   FQ G M+DA+E    + + +H  +       D 
Sbjct: 91   --HSREKALPSDNIRHALAESFKDEQRFQLGLMDDAAECFENMLERIHFHIVPS---RDA 150

Query: 1403 DTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRT 1462
            D           C+S +C+ H  F M ++E+  C SCG  S  L +T F   I+ +AL  
Sbjct: 151  DM----------CTSKSCITHQKFAMTLYEQCVCRSCGASSDPLPFTEFVRYISTTALCN 210

Query: 1463 TKVMCSE-------SSFDELLNVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFTTVL 1522
                  E         F ELL            +    CG+   I   L   P + T  L
Sbjct: 211  EVERMLERHERFKPEMFAELLQAANTTDDY--RKCPSNCGQKIKIRRVLMNCPEIVTIGL 270

Query: 1523 GWQKTCESADDITETLAA-LSTEIDVSVLYRGLDPKNVH----NLVSVVCYYGQHYHCFA 1582
             W        D+TE +   L+T + +  L+  +  +N      NLV ++CY  QHY  FA
Sbjct: 271  VWD---SEHSDLTEAVVRNLATHLYLPGLFYRVTDENAKNSELNLVGMICYTSQHYCAFA 330

Query: 1583 YSCDKKCWIMYDDRTVKVIG-GWADVLTMCEKGHLQPQVLFF 1612
            +      W+ +DD  VK IG  W DV++ C + H QP +LF+
Sbjct: 331  FHTKSSKWVFFDDANVKEIGTRWKDVVSKCIRCHFQPLLLFY 348

[Close]

BLAST of CmaCh11G001670 vs. ExPASy Swiss-Prot
Match: Q6IE24 (Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Rattus norvegicus OX=10116 GN=Usp54 PE=1 SV=2)

HSP 1 Score: 154.8 bits (390), Expect = 8.1e-36
Identity = 112/344 (32.56%), Postives = 163/344 (47.38%), Query Frame = 0


Query: 1283 GLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKA 1342
            GL NE G+ +CFLN  +Q LWHL  FR  F  R +T H  +GD C+ CAL  IF     +
Sbjct: 32   GLSNEPGQNSCFLNSALQVLWHLDIFRRSF--RQLTSHKCMGDSCIFCALKGIFKQFQCS 91

Query: 1343 SADSRREAVAPT-SLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTAGSSVSD 1402
            S     E V P+ +LR AL+    D   FQ G M+DA+E    +   +H  + A  +  D
Sbjct: 92   S-----EKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIHFHI-ADETKED 151

Query: 1403 TDTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALR 1462
                         C++  C+ H  F M +FE+  C SCG  S  L +    H I+ ++L 
Sbjct: 152  I------------CTAPHCISHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSL- 211

Query: 1463 TTKVMC--------SESSFDELL-NVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFT 1522
              + +C        S   F ELL N   M     C  +   CG+   I   L   P + T
Sbjct: 212  CNQAICMLEKREKPSPGMFGELLQNASTMGDLRDCPSN---CGERIRIRRVLMNAPQIIT 271

Query: 1523 TVLGWQKTCESADDITETLAALSTEIDV-SVLYRGLDPKNVHN---LVSVVCYYGQHYHC 1582
              L W    + +D   + + +L T + +  + +R  D +   +   LV ++CYYG+HY  
Sbjct: 272  IGLVWDS--DHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKQSELYLVGMICYYGKHYST 331

Query: 1583 FAYSCDKKCWIMYDDRTVKVIG-GWADVLTMCEKGHLQPQVLFF 1612
            F +    + W+ +DD  VK IG  W DV+T C KGH QP +L +
Sbjct: 332  FFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLY 349

[Close]

BLAST of CmaCh11G001670 vs. ExPASy Swiss-Prot
Match: P15975 (Inactive ubiquitin carboxyl-terminal hydrolase 53 OS=Mus musculus OX=10090 GN=Usp53 PE=1 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 8.9e-35
Identity = 107/342 (31.29%), Postives = 160/342 (46.78%), Query Frame = 0


Query: 1283 GLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKA 1342
            GL NE G+ +CFLN  +Q LW L  FR     R++T H+  GD C+ CAL  IFA     
Sbjct: 31   GLLNEPGQNSCFLNSAVQVLWQLDIFRRSL--RALTGHICQGDACIFCALKTIFAQFQ-- 90

Query: 1343 SADSRREAVAPTSLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTAGSSVSDT 1402
               SR +A+   ++R AL+    D   FQ G M+DA+E    I   +H  L       D 
Sbjct: 91   --HSREKALPSDNIRHALAESFKDEQRFQLGLMDDAAECFENILARIHFHLVPN---RDA 150

Query: 1403 DTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASAL-- 1462
            D           C+S +C+ H  F M ++E+  C SCG  S  L +T     I+ +AL  
Sbjct: 151  DM----------CTSKSCVTHQKFAMTLYEQCVCRSCGASSDPLPFTELVRYISTTALCN 210

Query: 1463 RTTKVM-----CSESSFDELLNVVE-MNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFTTV 1522
               ++M          F ELL      +    C  +   CG+   I   L   P + T  
Sbjct: 211  EVERMMERHERVKPEMFAELLQAANTADDYRKCPSN---CGQKIKIRRVLMNCPEIVTIG 270

Query: 1523 LGWQKTCESADDITETLAALSTEIDVSVLYRGLDPKNVH----NLVSVVCYYGQHYHCFA 1582
            L W    E +D   + + +L+T + +  L+  +  +N      +LV ++CY  +HY  FA
Sbjct: 271  LVWDS--EHSDLTEDVVRSLATHLYLPGLFYRVTDENATDSELHLVGMICYTSRHYCAFA 330

Query: 1583 YSCDKKCWIMYDDRTVKVIG-GWADVLTMCEKGHLQPQVLFF 1612
            +      W+ +DD  VK +G  W DV++ C + HLQP +LF+
Sbjct: 331  FHTKSSKWVFFDDAHVKEMGTRWKDVVSKCIRCHLQPLLLFY 348

[Close]

BLAST of CmaCh11G001670 vs. TAIR 10
Match: AT3G47910.1 (Ubiquitin carboxyl-terminal hydrolase-related protein )

HSP 1 Score: 1698.7 bits (4398), Expect = 0.0e+00
Identity = 953/1661 (57.38%), Postives = 1199/1661 (72.19%), Query Frame = 0


Query: 1    MGPKKKIIDPRSKQSPAARGV-VVDV-PSSANAADQNSIPEKASNHNQSRIEPVLLNGPD 60
            MG KKK    RSKQ P++  V VV+V PS  +A   N                   +GPD
Sbjct: 1    MGQKKKTSASRSKQPPSSTAVTVVEVEPSEISACSFNDGG---------------FSGPD 60

Query: 61   G----LSYSTIKLECERALTALRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTICVK 120
                 L  S +KLECE+AL +  RG++ KA+RL+K+  SR+++   SALIHRVQGTICVK
Sbjct: 61   ANGEPLDSSVVKLECEKALKSFGRGSYNKAIRLIKDSCSRHQD---SALIHRVQGTICVK 120

Query: 121  VASIIDDLNTKQRHLKNAIESARKAVQLSPNSIEFSHFYANLLYEVANDAK-EYEEVVQE 180
            VA++ +DL TKQ++L+NAIESARKAV+LSPNSIEF HFYANLLYE AN+ K EYEEVVQE
Sbjct: 121  VAAVYEDLATKQKYLRNAIESARKAVELSPNSIEFGHFYANLLYEAANEGKREYEEVVQE 180

Query: 181  CERALGIENPIDPAKESLQDEKSQKIPTAEARITHVQTELRQLIQKSNIYSISSWMKNLG 240
            C RAL IE PIDPA+ESLQDE   KI T EARI H Q ELR LIQKSNIYS+S+WM+ LG
Sbjct: 181  CHRALSIEYPIDPARESLQDETQLKILTPEARIAHFQDELRSLIQKSNIYSLSTWMQTLG 240

Query: 241  NGEEKFRLIPIRRVTEDPMEVRLVQARRANEIKKATKTPEERRKEIEVRVAAARLLQQKC 300
            NGEEKFRLIP+RR+ EDP+E  L+Q+RR NEIKK+TKT EERRKEIEVRVAA RLLQQK 
Sbjct: 241  NGEEKFRLIPLRRMAEDPIESNLIQSRRPNEIKKSTKTNEERRKEIEVRVAAHRLLQQKS 300

Query: 301  ETPQIQNEEGKVDRSLDSSSGSGTRVGERRKHGNLRKQGSSAERRDLVHSFWNSMSIEAK 360
            E+   +N E   ++  DS+  +G R GERRKHGN RK GS+A+RRD V S+W+S+S E K
Sbjct: 301  ESSPSENVEAVNNKGSDSALAAGPRSGERRKHGNARKNGSTADRRDRVRSYWDSLSKEMK 360

Query: 361  KDLFKIKISNLKAHFSSSKDASANEVISEALSFYDANKTWKFWVCCRCDEKFVDSDSHMH 420
            K+  ++K S+LK+HFS SKD  A E++SEALSF +ANKTW+FW CCRC + F++S++HMH
Sbjct: 361  KEFLRVKFSDLKSHFSGSKDGQAYEIVSEALSFCEANKTWRFWACCRCSQNFIESEAHMH 420

Query: 421  HVVQEHMGNLLPKMQSILPQNVDDEWTKMILNCSWKALDVSAAAKMLTTETKCKDSELVV 480
            H+VQ HMGN+LPKMQ +LPQ VD E   M+    WK LD+SA  K+L ++ K ++SE   
Sbjct: 421  HIVQAHMGNVLPKMQMVLPQIVDTERIDMLFKSPWKPLDLSATLKLLRSQQKIQNSE--- 480

Query: 481  DIFPQHHS-----ECDNYFKDAW-DSSPEKHKYGDSLNECRLSEKITNNGSMTYHENQGS 540
              F + HS       D+ FKDAW D++P+    GD+ N          N + +  E + S
Sbjct: 481  --FDEFHSGDNMDGGDDCFKDAWNDTTPD----GDTCNGW--------NENESEEEVKLS 540

Query: 541  VASYSSSDSFPVSDDPERTKLLEKIHAVFELLIRHKYLAASHLNKVIQFAIDELQGLASG 600
            +A +   D +P+SDDPER KLLEKI A FE LIRHKYLAASH +KVIQF +DELQ L S 
Sbjct: 541  IA-FPPPDGWPISDDPERAKLLEKIRAAFEQLIRHKYLAASHHDKVIQFTLDELQNLPSV 600

Query: 601  SHLLNQGLDQTPLCICFLGASQLRKILKFLQELSQSCGIGRYSDKITGQIEDSKSDKQAV 660
            S  LN+GL+++PLCICFLGAS L KILKFLQ+LSQ+CG+ RYS++     E +  D    
Sbjct: 601  SQFLNRGLNKSPLCICFLGASHLSKILKFLQDLSQACGLSRYSEQSNPHDEINFGD-LGR 660

Query: 661  EVREKVVLSEDGSLLLLNKCLLSSDITHADVPVAAAYHMLAATAKDLTS-NGVLSDVDPF 720
            EV E+++L  + S LL+++ LL ++        +A  ++  A++ D+ + N V S  D F
Sbjct: 661  EVTEEILLDSEDSCLLMDEKLLGTECIQEKYMGSAFNNVTIASSGDIANGNDVSSGADGF 720

Query: 721  LSWIYAGPSSGEQLVSWEKTKEEKIQRRMEIFQMLEKEFYHLQSLCERKCEHLNYEEALQ 780
            LSWI+ GPSS EQ+VSW +TKE+K  + +EI Q LEKEFYHLQ+LCERKCEHL+YE ALQ
Sbjct: 721  LSWIFTGPSSEEQVVSWMRTKEDKTNQGLEIMQHLEKEFYHLQNLCERKCEHLSYEGALQ 780

Query: 781  SVEDLCLEEGKKREALNEFIPKSYESVLRKRREELIEAENGVLLISSRFELDAVTNVLKE 840
            +VEDLCLEEG+KRE   EF  +SYE+VLRKRREEL E+++ +L ISSRFELDA+TNVLK+
Sbjct: 781  TVEDLCLEEGRKRETSAEFTHESYETVLRKRREELNESDHELLFISSRFELDAITNVLKD 840

Query: 841  AETLNVNQFGYQETFASVSPQLGDLESGEDEERRAKDYLHEVDTCIEVAIQRQKEQLSIE 900
            AETLN NQFGY+E++   S QL DLESGE +E   KD LHE D+ IE+AIQ+QKEQLS E
Sbjct: 841  AETLNHNQFGYEESYGCTSSQLRDLESGEADEWGIKDSLHEADSFIEIAIQKQKEQLSAE 900

Query: 901  ISKIDARIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDATKKSDA 960
            +S+IDA++MRNVTGMQQLELKL PVS++DYQ +LLPLV SY+RAHLE LAEKDAT+KSDA
Sbjct: 901  LSRIDAQMMRNVTGMQQLELKLGPVSSNDYQIVLLPLVKSYMRAHLEALAEKDATEKSDA 960

Query: 961  ASEAFLAELALDSKKGIRGGTDNSRHAHEKPKEKKRSKEFRKVKDSKVVSGPEQDVLRGQ 1020
            A EA L ELALDSKK  RG  DNS++  EK K+KK+ K+ RKVKD K   G +       
Sbjct: 961  AREALLVELALDSKKEARGRNDNSKNTLEKSKDKKKIKDTRKVKDMKATIGSDHR-SNAD 1020

Query: 1021 AVDGDPFPVSSDGDAAEVDIAVFENVDALRLQEEELRRKIELEADERKLEETLEYQRRIE 1080
            +V+  P PV+  GD +E DI V E V+AL+ +EEE +R+IELE +ERKLE+TLEYQRRIE
Sbjct: 1021 SVEHSPLPVAPVGDHSEADI-VSEAVEALKEEEEEYKRQIELEEEERKLEKTLEYQRRIE 1080

Query: 1081 NEAKQKHLAELQKKSAQTTHNNLAGLVPN-----------VEGADKHFKPSVVDKLAEND 1140
            +EAK+KH+AE QKK + +   N+A  V N           ++G +K      +++   N 
Sbjct: 1081 DEAKEKHMAEQQKKYSSSVPMNVAKTVYNGCTDNEVDYLVLQGQEKS-----INQEKRNG 1140

Query: 1141 LVSDLSG-----NGPAMRNALSGVSNVGVIEN--------------SLPSSDRKKGRKGR 1200
             + DL G     NG       S +S+   ++N               +  SD++ GR+ R
Sbjct: 1141 RLDDLEGASVNTNGVFPSTNHSAISDTAKVQNVKSQKVPNGTAMQAGIFQSDQRTGRRTR 1200

Query: 1201 RHKVSIKPVDGNQP-SPSDKDNVAFDNQLTEQVRYHGNPLQDSVNPLLEDNSTKTSR--Q 1260
            R K S K  DG  P +P + +N       T   R H   L+++      D  TKT R  Q
Sbjct: 1201 RQKASNKLADGKYPVTPPETENSKSQLSGTNGER-HSETLRNN-----GDVGTKTLRQLQ 1260

Query: 1261 HVEDEEERFQADLKKAVRQSLDAFQEQQKLPLIMSSRTPLISHGEVDSNGLPSNERNVEN 1320
              +D+EERFQAD+++AV QSLD +Q  + +   +  RTPL    EV+++G  S++  +E+
Sbjct: 1261 AEDDDEERFQADMQRAVLQSLDVYQGGRNMASCL--RTPL----EVNNDGGLSDD-TMES 1320

Query: 1321 VQAAG--MFGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCA 1380
              + G  +FGTGL+NEVGEYNCFLNVIIQSLW+L  FR EFLR S  EH HVGDPCVVC+
Sbjct: 1321 RSSTGVTIFGTGLQNEVGEYNCFLNVIIQSLWNLELFRAEFLRSSTREHHHVGDPCVVCS 1380

Query: 1381 LYEIFAALNKASADSRREAVAPTSLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQ 1440
            LYEIF AL+ AS++ + E VAP+SLR+ALSNL PDS+FFQE QMNDASEVLAVIFDCLH+
Sbjct: 1381 LYEIFTALSAASSEKQNEPVAPSSLRIALSNLYPDSSFFQEAQMNDASEVLAVIFDCLHR 1440

Query: 1441 SLTAGSSVSDTDTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSF 1500
            S    SSVSD D+ +SNC GSWDC++ TC+ HS+FGMDIFE++NCYSCGLESRHLKYTSF
Sbjct: 1441 SFAQSSSVSDVDSSDSNCTGSWDCANRTCIAHSLFGMDIFEQLNCYSCGLESRHLKYTSF 1500

Query: 1501 FHNINASALRTTKVMCSESSFDELLNVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVF 1560
            FHNINASALRT KV C+E+SFDELLN+VEMNHQL CD + GGCGKLN+IHH L+ PPHVF
Sbjct: 1501 FHNINASALRTMKVTCAENSFDELLNLVEMNHQLACDPETGGCGKLNHIHHILTTPPHVF 1560

Query: 1561 TTVLGWQKTCESADDITETLAALSTEIDVSVLYRGLDPKNVHNLVSVVCYYGQHYHCFAY 1613
            TTVLGWQ TCE+ +DI  TLAAL+TEID+S++YRGLDPK+ ++LVSVVCYYGQHYHCFA+
Sbjct: 1561 TTVLGWQNTCETVEDIAATLAALNTEIDISIMYRGLDPKSTYSLVSVVCYYGQHYHCFAH 1604

[Close]

BLAST of CmaCh11G001670 vs. TAIR 10
Match: AT3G47910.2 (Ubiquitin carboxyl-terminal hydrolase-related protein )

HSP 1 Score: 1698.3 bits (4397), Expect = 0.0e+00
Identity = 953/1662 (57.34%), Postives = 1199/1662 (72.14%), Query Frame = 0


Query: 1    MGPKKKIIDPRSKQSPAARGV-VVDV-PSSANAADQNSIPEKASNHNQSRIEPVLLNGPD 60
            MG KKK    RSKQ P++  V VV+V PS  +A   N                   +GPD
Sbjct: 1    MGQKKKTSASRSKQPPSSTAVTVVEVEPSEISACSFNDGG---------------FSGPD 60

Query: 61   G----LSYSTIKLECERALTALRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTICVK 120
                 L  S +KLECE+AL +  RG++ KA+RL+K+  SR+++   SALIHRVQGTICVK
Sbjct: 61   ANGEPLDSSVVKLECEKALKSFGRGSYNKAIRLIKDSCSRHQD---SALIHRVQGTICVK 120

Query: 121  VASIIDDLNTKQRHLKNAIESARKAVQLSPNSIEFSHFYANLLYEVANDAK-EYEEVVQE 180
            VA++ +DL TKQ++L+NAIESARKAV+LSPNSIEF HFYANLLYE AN+ K EYEEVVQE
Sbjct: 121  VAAVYEDLATKQKYLRNAIESARKAVELSPNSIEFGHFYANLLYEAANEGKREYEEVVQE 180

Query: 181  CERALGIENPIDPAKESLQDEKSQKIPTAEARITHVQTELRQLIQKSNIYSISSWMKNLG 240
            C RAL IE PIDPA+ESLQDE   KI T EARI H Q ELR LIQKSNIYS+S+WM+ LG
Sbjct: 181  CHRALSIEYPIDPARESLQDETQLKILTPEARIAHFQDELRSLIQKSNIYSLSTWMQTLG 240

Query: 241  NGEEKFRLIPIRRVTEDPMEVRLVQARRANEIKKATKTPEERRKEIEVRVAAARLLQQKC 300
            NGEEKFRLIP+RR+ EDP+E  L+Q+RR NEIKK+TKT EERRKEIEVRVAA RLLQQK 
Sbjct: 241  NGEEKFRLIPLRRMAEDPIESNLIQSRRPNEIKKSTKTNEERRKEIEVRVAAHRLLQQKS 300

Query: 301  ETPQIQNEEGKVDRSLDSSSGSGTRVGERRKHGNLRKQGSSAERRDLVHSFWNSMSIEAK 360
            E+   +N E   ++  DS+  +G R GERRKHGN RK GS+A+RRD V S+W+S+S E K
Sbjct: 301  ESSPSENVEAVNNKGSDSALAAGPRSGERRKHGNARKNGSTADRRDRVRSYWDSLSKEMK 360

Query: 361  KDLFKIKISNLKAHFSSSKDASANEVISEALSFYDANKTWKFWVCCRCDEKFVDSDSHMH 420
            K+  ++K S+LK+HFS SKD  A E++SEALSF +ANKTW+FW CCRC + F++S++HMH
Sbjct: 361  KEFLRVKFSDLKSHFSGSKDGQAYEIVSEALSFCEANKTWRFWACCRCSQNFIESEAHMH 420

Query: 421  HVVQEHMGNLLPKMQSILPQNVDDEWTKMILNCSWKALDVSAAAKMLTTETKCKDSELVV 480
            H+VQ HMGN+LPKMQ +LPQ VD E   M+    WK LD+SA  K+L ++ K ++SE   
Sbjct: 421  HIVQAHMGNVLPKMQMVLPQIVDTERIDMLFKSPWKPLDLSATLKLLRSQQKIQNSE--- 480

Query: 481  DIFPQHHS-----ECDNYFKDAW-DSSPEKHKYGDSLNECRLSEKITNNGSMTYHENQGS 540
              F + HS       D+ FKDAW D++P+    GD+ N          N + +  E + S
Sbjct: 481  --FDEFHSGDNMDGGDDCFKDAWNDTTPD----GDTCNGW--------NENESEEEVKLS 540

Query: 541  VASYSSSDSFPVSDDPERTKLLEKIHAVFELLIRHKYLAASHLNKVIQFAIDELQGLASG 600
            +A +   D +P+SDDPER KLLEKI A FE LIRHKYLAASH +KVIQF +DELQ L S 
Sbjct: 541  IA-FPPPDGWPISDDPERAKLLEKIRAAFEQLIRHKYLAASHHDKVIQFTLDELQNLPSV 600

Query: 601  SHLLNQGLDQTPLCICFLGASQLRKILKFLQELSQSCGIGRYSDKITGQIEDSKSDKQAV 660
            S  LN+GL+++PLCICFLGAS L KILKFLQ+LSQ+CG+ RYS++     E +  D    
Sbjct: 601  SQFLNRGLNKSPLCICFLGASHLSKILKFLQDLSQACGLSRYSEQSNPHDEINFGD-LGR 660

Query: 661  EVREKVVLSEDGSLLLLNKCLLSSDITHADVPVAAAYHMLAATAKDLTS-NGVLSDVDPF 720
            EV E+++L  + S LL+++ LL ++        +A  ++  A++ D+ + N V S  D F
Sbjct: 661  EVTEEILLDSEDSCLLMDEKLLGTECIQEKYMGSAFNNVTIASSGDIANGNDVSSGADGF 720

Query: 721  LSWIYAGPSSGEQLVSWEKTKEEKIQRRMEIFQMLEKEFYHLQSLCERKCEHLNYEEALQ 780
            LSWI+ GPSS EQ+VSW +TKE+K  + +EI Q LEKEFYHLQ+LCERKCEHL+YE ALQ
Sbjct: 721  LSWIFTGPSSEEQVVSWMRTKEDKTNQGLEIMQHLEKEFYHLQNLCERKCEHLSYEGALQ 780

Query: 781  SVEDLCLEEGKKREALNEFIPKSYESVLRKRREELIEAENGVLLISSRFELDAVTNVLKE 840
            +VEDLCLEEG+KRE   EF  +SYE+VLRKRREEL E+++ +L ISSRFELDA+TNVLK+
Sbjct: 781  TVEDLCLEEGRKRETSAEFTHESYETVLRKRREELNESDHELLFISSRFELDAITNVLKD 840

Query: 841  AETLNVNQFGYQETFASVSPQLGDLESGEDEERRAKDYLHEVDTCIEVAIQRQKEQLSIE 900
            AETLN NQFGY+E++   S QL DLESGE +E   KD LHE D+ IE+AIQ+QKEQLS E
Sbjct: 841  AETLNHNQFGYEESYGCTSSQLRDLESGEADEWGIKDSLHEADSFIEIAIQKQKEQLSAE 900

Query: 901  ISKIDARIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDATKKSDA 960
            +S+IDA++MRNVTGMQQLELKL PVS++DYQ +LLPLV SY+RAHLE LAEKDAT+KSDA
Sbjct: 901  LSRIDAQMMRNVTGMQQLELKLGPVSSNDYQIVLLPLVKSYMRAHLEALAEKDATEKSDA 960

Query: 961  ASEAFLAELALDSKKGIRGGTDNSRHAHEKPKEKKRSKEFRKVKDSKVVSGPEQDVLRGQ 1020
            A EA L ELALDSKK  RG  DNS++  EK K+KK+ K+ RKVKD K   G +       
Sbjct: 961  AREALLVELALDSKKEARGRNDNSKNTLEKSKDKKKIKDTRKVKDMKATIGSDHR-SNAD 1020

Query: 1021 AVDGDPFPVSSDGDAAEVDIAVFENVDALRLQEEELRRKIELEADERKLEETLEYQRRIE 1080
            +V+  P PV+  GD +E DI V E V+AL+ +EEE +R+IELE +ERKLE+TLEYQRRIE
Sbjct: 1021 SVEHSPLPVAPVGDHSEADI-VSEAVEALKEEEEEYKRQIELEEEERKLEKTLEYQRRIE 1080

Query: 1081 NEAKQKHLAELQKKSAQTTHNNLAGLVPN-----------VEGADKHFKPSVVDKLAEND 1140
            +EAK+KH+AE QKK + +   N+A  V N           ++G +K      +++   N 
Sbjct: 1081 DEAKEKHMAEQQKKYSSSVPMNVAKTVYNGCTDNEVDYLVLQGQEKS-----INQEKRNG 1140

Query: 1141 LVSDLSG-----NGPAMRNALSGVSNVGVIEN---------------SLPSSDRKKGRKG 1200
             + DL G     NG       S +S+   ++N                +  SD++ GR+ 
Sbjct: 1141 RLDDLEGASVNTNGVFPSTNHSAISDTAKVQNVKSQKVVPNGTAMQAGIFQSDQRTGRRT 1200

Query: 1201 RRHKVSIKPVDGNQP-SPSDKDNVAFDNQLTEQVRYHGNPLQDSVNPLLEDNSTKTSR-- 1260
            RR K S K  DG  P +P + +N       T   R H   L+++      D  TKT R  
Sbjct: 1201 RRQKASNKLADGKYPVTPPETENSKSQLSGTNGER-HSETLRNN-----GDVGTKTLRQL 1260

Query: 1261 QHVEDEEERFQADLKKAVRQSLDAFQEQQKLPLIMSSRTPLISHGEVDSNGLPSNERNVE 1320
            Q  +D+EERFQAD+++AV QSLD +Q  + +   +  RTPL    EV+++G  S++  +E
Sbjct: 1261 QAEDDDEERFQADMQRAVLQSLDVYQGGRNMASCL--RTPL----EVNNDGGLSDD-TME 1320

Query: 1321 NVQAAG--MFGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVC 1380
            +  + G  +FGTGL+NEVGEYNCFLNVIIQSLW+L  FR EFLR S  EH HVGDPCVVC
Sbjct: 1321 SRSSTGVTIFGTGLQNEVGEYNCFLNVIIQSLWNLELFRAEFLRSSTREHHHVGDPCVVC 1380

Query: 1381 ALYEIFAALNKASADSRREAVAPTSLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLH 1440
            +LYEIF AL+ AS++ + E VAP+SLR+ALSNL PDS+FFQE QMNDASEVLAVIFDCLH
Sbjct: 1381 SLYEIFTALSAASSEKQNEPVAPSSLRIALSNLYPDSSFFQEAQMNDASEVLAVIFDCLH 1440

Query: 1441 QSLTAGSSVSDTDTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTS 1500
            +S    SSVSD D+ +SNC GSWDC++ TC+ HS+FGMDIFE++NCYSCGLESRHLKYTS
Sbjct: 1441 RSFAQSSSVSDVDSSDSNCTGSWDCANRTCIAHSLFGMDIFEQLNCYSCGLESRHLKYTS 1500

Query: 1501 FFHNINASALRTTKVMCSESSFDELLNVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHV 1560
            FFHNINASALRT KV C+E+SFDELLN+VEMNHQL CD + GGCGKLN+IHH L+ PPHV
Sbjct: 1501 FFHNINASALRTMKVTCAENSFDELLNLVEMNHQLACDPETGGCGKLNHIHHILTTPPHV 1560

Query: 1561 FTTVLGWQKTCESADDITETLAALSTEIDVSVLYRGLDPKNVHNLVSVVCYYGQHYHCFA 1613
            FTTVLGWQ TCE+ +DI  TLAAL+TEID+S++YRGLDPK+ ++LVSVVCYYGQHYHCFA
Sbjct: 1561 FTTVLGWQNTCETVEDIAATLAALNTEIDISIMYRGLDPKSTYSLVSVVCYYGQHYHCFA 1605

[Close]

BLAST of CmaCh11G001670 vs. TAIR 10
Match: AT3G47890.1 (Ubiquitin carboxyl-terminal hydrolase-related protein )

HSP 1 Score: 1661.7 bits (4302), Expect = 0.0e+00
Identity = 926/1598 (57.95%), Postives = 1160/1598 (72.59%), Query Frame = 0


Query: 57   PDGLSYSTIKLECERALTALRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTICVKVA 116
            P  L  + IKLECE+AL +  RG++ KA+RL+K+  SR+++   SALIHRVQGTICVKVA
Sbjct: 8    PAPLDSALIKLECEKALKSFGRGSYNKAIRLIKDSCSRHQD---SALIHRVQGTICVKVA 67

Query: 117  SIIDDLNTKQRHLKNAIESARKAVQLSPNSIEFSHFYANLLYEVANDAK-EYEEVVQECE 176
            ++ +DL TKQ++L+NAIESARKAV+LSP+SIEF HFYANLLYE AND K EY+EVVQEC 
Sbjct: 68   AVYEDLATKQKYLRNAIESARKAVELSPDSIEFGHFYANLLYEAANDGKREYDEVVQECH 127

Query: 177  RALGIENPIDPAKESLQDEKSQKIPTAEARITHVQTELRQLIQKSNIYSISSWMKNLGNG 236
            RAL IENPIDPAKESLQDE   KI T EARI HVQ ELR LIQKSNI S+S+WM NLG G
Sbjct: 128  RALSIENPIDPAKESLQDETQLKILTPEARIVHVQDELRSLIQKSNISSLSTWMNNLGKG 187

Query: 237  EEKFRLIPIRRVTEDPMEVRLVQARRANEIKKATKTPEERRKEIEVRVAAARLLQQKCET 296
            EEKFRLIPIRR+ EDP+E  LVQ RR NEIKKA K+ EE RKE+EVRVAAARLLQQK E 
Sbjct: 188  EEKFRLIPIRRMAEDPIESNLVQTRRPNEIKKANKSIEEIRKEVEVRVAAARLLQQKSEC 247

Query: 297  PQIQNEEGKVD-RSLDSSSGSGTRVGERRKHGNLRKQGSSAERRDLVHSFWNSMSIEAKK 356
              +    G VD +  D++ GSG R GERRKHGN R+ GS+A+RRD V S+W+SMS E KK
Sbjct: 248  ENV----GAVDNKGSDATLGSGKRSGERRKHGNARRNGSTADRRDRVKSYWDSMSKEMKK 307

Query: 357  DLFKIKISNLKAHFSSSKDASANEVISEALSFYDANKTWKFWVCCRCDEKFVDSDSHMHH 416
             L ++K+S+LK+HFS+SKD + NE+ISEALSF +ANKTW+FWVCC+C EKF+ S+++MHH
Sbjct: 308  QLLRVKLSDLKSHFSASKDGNENEIISEALSFCEANKTWRFWVCCQCSEKFIKSEAYMHH 367

Query: 417  VVQEHMGNLLPKMQSILPQNVDDEWTKMILNCSWKALDVSAAAKMLTTETKCKDSELVVD 476
            +VQ HMGN+LPKMQ +LPQ+ D E   M+L   WK LD+SAA K L +  K ++SE    
Sbjct: 368  IVQVHMGNVLPKMQMVLPQSFDTERIDMLLTSPWKPLDLSAAVKWLRSRQKIQNSEFSEF 427

Query: 477  IFPQHHSECDNYFKDAW-DSSPEKHKYGDSLNECRLSEKITNNGSMTYHENQGSVASYSS 536
                +  + D+ FKDA  D+SPEK   GDS   C   E     G ++         ++  
Sbjct: 428  HAGDNMDDGDDCFKDARNDTSPEKESLGDSCKGC--DENDPEEGKLS--------ITFPP 487

Query: 537  SDSFPVSDDPERTKLLEKIHAVFELLIRHKYLAASHLNKVIQFAIDELQGLASGSHLLNQ 596
             D +P+SDDPER KLLEKI A FELLIRHKYLAASH +KVIQF +DELQ LAS S  LN+
Sbjct: 488  PDGWPISDDPERAKLLEKIRAAFELLIRHKYLAASHHDKVIQFTLDELQNLASVSQFLNR 547

Query: 597  GLDQTPLCICFLGASQLRKILKFLQELSQSCGIGRYSDKITGQIEDSKSDKQAVEVREKV 656
             L+Q+P+CICFLGASQLRKILKFLQ+LSQ+CG+ RYS++ +   ++        EV E++
Sbjct: 548  SLNQSPICICFLGASQLRKILKFLQDLSQACGLSRYSEQ-SNPNDEFNFGALCREVTEEI 607

Query: 657  VLSEDGSLLLLNKCLLSSDITHADVPVAAAYHMLAATAKDLTS-NGVLSDVDPFLSWIYA 716
            +L  + S LLL++ LL ++        +A +++  A++ D+ + N V S  D FLSWI+ 
Sbjct: 608  LLDGEDSCLLLDEKLLGTECIQEIYMGSALHNVAVASSGDIANGNDVSSGADGFLSWIFT 667

Query: 717  GPSSGEQLVSWEKTKEEKIQRRMEIFQMLEKEFYHLQSLCERKCEHLNYEEALQSVEDLC 776
            GPSS EQ+VSW +TKEEK  + +EI Q LEKEFYHLQ+LCERKCEHL+YE ALQ+VEDLC
Sbjct: 668  GPSSEEQVVSWMRTKEEKTNQGLEIMQHLEKEFYHLQNLCERKCEHLSYEGALQTVEDLC 727

Query: 777  LEEGKKREALNEFIPKSYESVLRKRREELIEAENGVLLISSRFELDAVTNVLKEAETLNV 836
            LEE +KRE   EF  +SYESVLRKRREEL E +  ++ ISSRFELDA+TNVLK+AETLN 
Sbjct: 728  LEESRKRETSAEFTHESYESVLRKRREELNENDLELVFISSRFELDALTNVLKDAETLNH 787

Query: 837  NQFGYQETFASVSPQLGDLESGEDEERRAKDYLHEVDTCIEVAIQRQKEQLSIEISKIDA 896
            NQFGY+E++   S QL DLESGE +E   KD LHE D+ IEVAIQ+QKEQLS E+S+IDA
Sbjct: 788  NQFGYEESYGCTSSQLRDLESGEADEWGMKDSLHEADSFIEVAIQKQKEQLSAELSRIDA 847

Query: 897  RIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDATKKSDAASEAFL 956
            ++MRNVTGMQQLELKL PVS++DYQ +LLPLV SY+RAHLE LAEKDAT+KSDAA EA L
Sbjct: 848  QMMRNVTGMQQLELKLGPVSSNDYQIVLLPLVKSYMRAHLEALAEKDATEKSDAAREALL 907

Query: 957  AELALDSKKGIRGGTDNSRHAHEKPKEKKRSKEFRKVKDSKVVSGPEQDVLRGQAVDGDP 1016
             ELALDSKK  RG  DNS+H  EK K+KK+ K+ RK+K+ K   G +     G +++   
Sbjct: 908  FELALDSKKEGRGRNDNSKHTLEKSKDKKKIKDTRKLKNLKATIGNDHR-FNGDSIEHSL 967

Query: 1017 FPVSSDGDAAEVDIAVFENVDALRLQEEELRRKIELEADERKLEETLEYQRRIENEAKQK 1076
              V+S GD +E D+ V E ++AL  +EEE RR  ELE +ERKL +TLEYQRRIENEAK+K
Sbjct: 968  LSVASFGDHSEADV-VSEAIEALSDEEEEYRRCNELEEEERKLAKTLEYQRRIENEAKEK 1027

Query: 1077 HLAELQKKSAQTTHNNLAGLVPN------VEGADKHFKPSVVDKLAENDLVSDLSG---- 1136
            H+AE +KK + +   N+   V +       + AD   +   +++   N  + DL G    
Sbjct: 1028 HIAEQKKKYSCSDPMNVTEAVYDDCIENFFDDADLQEQEKPINQEKWNKQLDDLEGAKVN 1087

Query: 1137 -NG--PAMRNALSG-------------VSNVGVIENSLPSSDRKKGRKGRRHKVSIKPVD 1196
             NG  P+  + +               V N   I+  +  SD++ GR+GRR K S K VD
Sbjct: 1088 INGVFPSTNHCVISDTAKVLDVISQEVVPNGIAIQAGVFQSDQRPGRRGRRQKASNKLVD 1147

Query: 1197 G--------NQPSPSDKDNVAFDNQLTEQVRYHGNPLQDSVNPLLEDNSTKTSR--QHVE 1256
            G        ++ S S +     + Q +E +R +G            D   KT R  Q  +
Sbjct: 1148 GKYQVTLSESEDSKSQRSGTDSERQ-SETLRSNG------------DAGPKTLRQLQAED 1207

Query: 1257 DEEERFQADLKKAVRQSLDAFQEQQKLPLIMSSRTPLISHGEVDSNGLPSNERNVENVQA 1316
            DEEERFQADLK+A  QSLD ++ ++ +   +  RT L      D+N    ++   E+  +
Sbjct: 1208 DEEERFQADLKRAKLQSLDVYRGRRNMTSCL--RTSL-----EDNNDWVLSDVTKESQSS 1267

Query: 1317 AG--MFGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYE 1376
             G  +FGTGL+NEVGEYNCFLNVIIQSLW+L  FR EFLR S  EH H GDPCVVC+LY 
Sbjct: 1268 PGVAIFGTGLQNEVGEYNCFLNVIIQSLWNLGMFRAEFLRSSTLEHHHFGDPCVVCSLYA 1327

Query: 1377 IFAALNKASADSRREAVAPTSLRVALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLT 1436
            IF AL+ AS+++R+E VAP+SLR+ALSNL PDS+FFQE QMNDASEVLAVIFDCLH+S  
Sbjct: 1328 IFTALSTASSETRKEPVAPSSLRIALSNLYPDSSFFQEAQMNDASEVLAVIFDCLHRSFA 1387

Query: 1437 AGSSVSDTDTVESNCIGSWDCSSDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHN 1496
              SSVSDT++ ESN  GSWDC++ +C+ HS+FGMD+ E++NCYSCGLESRHLKYTSFFHN
Sbjct: 1388 QSSSVSDTESAESNSTGSWDCANRSCIAHSLFGMDVSEQLNCYSCGLESRHLKYTSFFHN 1447

Query: 1497 INASALRTTKVMCSESSFDELLNVVEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFTTV 1556
            INASALRT KV C+E+SFDELLN+VEMNHQL CD++ GGCGK N+IHH L+ PPHVFT V
Sbjct: 1448 INASALRTMKVTCAENSFDELLNLVEMNHQLACDREAGGCGKRNHIHHILTTPPHVFTIV 1507

Query: 1557 LGWQKTCESADDITETLAALSTEIDVSVLYRGLDPKNVHNLVSVVCYYGQHYHCFAYSCD 1613
            LGWQ TCE+ +DI  TLAAL+TEID+S++YRG+DPKN ++LVSVVCYYGQHYHCFAYS +
Sbjct: 1508 LGWQNTCETVEDIAATLAALNTEIDISIMYRGVDPKNTYSLVSVVCYYGQHYHCFAYSHE 1565

[Close]

BLAST of CmaCh11G001670 vs. TAIR 10
Match: AT1G65120.2 (Ubiquitin carboxyl-terminal hydrolase-related protein )

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-46
Identity = 268/1277 (20.99%), Postives = 486/1277 (38.06%), Query Frame = 0


Query: 341  VHSFWNSMSIEAKKDLFKIKISNLKAHFSSSKDASANEVISEALSFYDANKTWKFWVCCR 400
            + S+W SM +E+K++  K+ I+ L A+          + + + L     N+ WKFW+C  
Sbjct: 213  LRSYWASMDVESKRNFMKVSIAKLTAYVERLYGRVGLDALEQVLDSARINRKWKFWMCRS 272

Query: 401  CDEKFVDSDSHMHHVVQEHMGNLLPKMQSILPQNVDDEWTKMILNCSWKALDVSAAAKML 460
            C +KF        H+ QEH     P     + Q VD+ W  MI    W+ +DV AA +M+
Sbjct: 273  CSQKFYYPKKFRSHLEQEHAAKFKPSTTKHMAQRVDEVWAGMISVAGWEPVDVVAAVEMI 332

Query: 461  TTETKCKDSELVVDIFPQHHSECDNYFKDAWDSSPEKHKYGDSLNECRLSEKITNNGSMT 520
             T               Q  S  +  +++ W                             
Sbjct: 333  KT---------------QLESVKEFVYENGW----------------------------- 392

Query: 521  YHENQGSVASYSSSDSFPVSDDPERTKLLEKIHAVFELLIRHKYLAASHLNKVIQFAIDE 580
                         S ++P++ D ER+KLL+++ ++  L    K L+ S  + ++Q  +  
Sbjct: 393  -------------SKNWPLAVDEERSKLLKELQSLLLLFQERKILSCSIRDWMMQLTVKH 452

Query: 581  LQGLASGSHLLNQ--GLDQTPLCICFLGASQLRKILKFLQELSQSCGIGRYSDKITGQIE 640
            L  L    H L+    L +TP  ICFL   +L +IL  L+ ++     G    ++     
Sbjct: 453  LAQLEISEHTLSSKCRLVETPQSICFLECHELNQILDLLKRINCERVDG---TELVSNAT 512

Query: 641  DSKSDKQAVEVREKVVLSEDGSLLLLNKCLLSSDITHADVPVAAAYHMLAATAKDLTSNG 700
            DS   +  + V+EK+    + S +LL+K LL   I   D        ++     ++    
Sbjct: 513  DSLCGR--LRVKEKIEFDHEFSFMLLDKRLLRGKIASFD-----DEGIIDVCDHNVHYTK 572

Query: 701  VLSDVDPFLSWIYAGPSSGEQLVSWEKTKEEKIQRRMEIFQMLEKEFYHLQSLCERKCEH 760
                 D  ++W+   P   E        +   ++  + + + +      L +   +K + 
Sbjct: 573  THPQGDDTITWLLDYPLIDESFEFPRSIRAHNLEICVAVLRAIHFTCATLGTKYAKKLQI 632

Query: 761  LNYEEALQSVEDLCLEEGKKREALNEFIPKSYESVLRKRREELIEAENGVLLISSRFELD 820
            LNY+ AL   ++LC+ E ++R+ + E    +Y S+L  + EE +  + G    +++  L 
Sbjct: 633  LNYDAALIDAKNLCILEDERRKNVPEDQWNTYASLLCDKCEERLVIDAGD-SHTTKLCLC 692

Query: 821  AVTNVLKEAETLNVNQFGYQETFASVSPQLGDLESGEDEERRAKDYLHEVDTCIEVAIQR 880
            AV +VL++A            TF     +  DL   ED       + +  D  +  +I  
Sbjct: 693  AVRDVLEKAS---------HPTF-----EFSDL---EDCMTLIHGHKNLNDDTVLKSIDL 752

Query: 881  QKEQLSIEISKIDARIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEK 940
             K  ++ ++   D++I+        L   L  +S  DY+S +L L+  Y R  L+++ + 
Sbjct: 753  LKSVVTNKVPVADSKILLIENSRTNLLNDLVKLSVFDYRSYILHLLKRYQRDELDEIVDM 812

Query: 941  DATKKSDAASEAFLAELALDSKKGIRGGTDNSRHAHEKPKEKKRSKEFRKVKDSKVVSGP 1000
            DA  K  AA    L+E     +KG + G++  ++   K      SK+   V +S V   P
Sbjct: 813  DAKTKLAAAQAEHLSE--EKQEKGKKSGSNKKKNRSNKRTSASMSKD--DVHESSVNLEP 872

Query: 1001 EQDVLRGQAVDGDPFPVSSDGDAAEVDIAVFENVDALRLQEEELRRKIELEADERKLEET 1060
            +            P P S++ D+ E +       D L  +    R ++E+ ++ +  +ET
Sbjct: 873  KVT---------PPSPKSTEEDSMEPE-------DTLSSE----RGRLEISSNTKSQDET 932

Query: 1061 LEYQRRIENEAKQKHLAELQKKSAQTTHNNLAGLVPNVEGADKHFKPSVVDKLAENDLVS 1120
                + +EN   +  L+E                  N+E A K        K+   +   
Sbjct: 933  ---AKDMENMPGEDLLSE------------------NLESAHK--------KVTRYNSAL 992

Query: 1121 DLSGNGPAMRNALSGVSNVGVIENSLPSSDRKKGRKGRRHKVSIKPVDGNQPSPSDKDNV 1180
            D++         L  + N+ V++                                  +++
Sbjct: 993  DMT---------LKALLNIKVLQ----------------------------------EDL 1052

Query: 1181 AFDNQLTEQVRYHGNPLQDSVNPLLEDNSTKTSRQHVEDEEERFQADLKKAVRQSLDAFQ 1240
              + QL     +HGN L++ V   L+D  +    + ++++E                   
Sbjct: 1053 VHNRQL-----FHGN-LEEQVPCALKDFFSAVVSEQIKEDE------------------- 1112

Query: 1241 EQQKLPLIMSSRTPLISHGEVDSNGLPSNERNVENVQAAGMFGTGLKNEVGEYNCFLNVI 1300
                                                                Y+  L+ +
Sbjct: 1113 ---------------------------------------------------LYSYLLSNL 1144

Query: 1301 IQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKASADSRREAVAPTSLRV 1360
            + SL                E VH                                    
Sbjct: 1173 LASL----------------EEVH------------------------------------ 1144

Query: 1361 ALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTAGSSVSDTDTVESNCIGSWDCSSD 1420
            +LS              +DA EV+  I + LH                      W     
Sbjct: 1233 SLS--------------SDADEVVVTILEFLHW---------------------WKSPEK 1144

Query: 1421 TCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTTKVMCSESSFDELLNV 1480
              LV  +F ++ +ERM C  C     + + +S+   + A+++R  K       F+E+L V
Sbjct: 1293 ESLVTRLFTLEEYERMRCTKCRRNPNYPEQSSYGIVMAANSIRNLKCAFGNMKFEEILTV 1144

Query: 1481 VEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFTTVLGWQKTCESADDITETLAALSTEI 1540
            + M  +++CD   GGCGK N++HH LS  P +FT VL W+K  E+  +I+ET  AL+ EI
Sbjct: 1353 IRMEDEMICDVKTGGCGKTNFVHHVLSRCPPIFTIVLEWEKN-ETETEISETAKALAWEI 1144

Query: 1541 DVSVLYRGL-DPKNVHNLVSVV-CYYGQHYHCFAYSCDKKCWIMYDDRTVKVIGGWADVL 1600
            D+S LY GL +P   + LVS++ C     + C AY  ++   + ++    + +G W +V+
Sbjct: 1413 DISRLYEGLEEPNTNYRLVSMIGCGEEGEHICMAYKTNRWVSLRHEALLEEGVGNWKNVV 1144

Query: 1601 TMCEKGHLQPQVLFFEA 1614
             +C +  ++P++LF+EA
Sbjct: 1473 RICGERRVRPEILFYEA 1144

[Close]

BLAST of CmaCh11G001670 vs. TAIR 10
Match: AT1G65120.1 (Ubiquitin carboxyl-terminal hydrolase-related protein )

HSP 1 Score: 164.1 bits (414), Expect = 9.5e-40
Identity = 260/1237 (21.02%), Postives = 462/1237 (37.35%), Query Frame = 0


Query: 341  VHSFWNSMSIEAKKDLFKIKISNLKAHFSSSKDASANEVISEALSFYDANKTWKFWVCCR 400
            + S+W SM +E+K++  K+ I+ L A+          + + + L     N+ WKFW+C  
Sbjct: 213  LRSYWASMDVESKRNFMKVSIAKLTAYVERLYGRVGLDALEQVLDSARINRKWKFWMCRS 272

Query: 401  CDEKFVDSDSHMHHVVQEHMGNLLPKMQSILPQNVDDEWTKMILNCSWKALDVSAAAKML 460
            C +KF        H+ QEH     P     + Q VD+ W  MI    W+ +DV AA +M+
Sbjct: 273  CSQKFYYPKKFRSHLEQEHAAKFKPSTTKHMAQRVDEVWAGMISVAGWEPVDVVAAVEMI 332

Query: 461  TTETKCKDSELVVDIFPQHHSECDNYFKDAWDSSPEKHKYGDSLNECRLSEKITNNGSMT 520
             T               Q  S  +  +++ W                             
Sbjct: 333  KT---------------QLESVKEFVYENGW----------------------------- 392

Query: 521  YHENQGSVASYSSSDSFPVSDDPERTKLLEKIHAVFELLIRHKYLAASHLNKVIQFAIDE 580
                         S ++P++ D ER+KLL+++ ++  L    K L+ S  + ++Q  +  
Sbjct: 393  -------------SKNWPLAVDEERSKLLKELQSLLLLFQERKILSCSIRDWMMQLTVKH 452

Query: 581  LQGLASGSHLLNQ--GLDQTPLCICFLGASQLRKILKFLQELSQSCGIGRYSDKITGQIE 640
            L  L    H L+    L +TP  ICFL   +L +IL  L+ ++     G    ++     
Sbjct: 453  LAQLEISEHTLSSKCRLVETPQSICFLECHELNQILDLLKRINCERVDG---TELVSNAT 512

Query: 641  DSKSDKQAVEVREKVVLSEDGSLLLLNKCLLSSDITHADVPVAAAYHMLAATAKDLTSNG 700
            DS   +  + V+EK+    + S +LL+K LL   I   D        ++     ++    
Sbjct: 513  DSLCGR--LRVKEKIEFDHEFSFMLLDKRLLRGKIASFD-----DEGIIDVCDHNVHYTK 572

Query: 701  VLSDVDPFLSWIYAGPSSGEQLVSWEKTKEEKIQRRMEIFQMLEKEFYHLQSLCERKCEH 760
                 D  ++W+   P   E        +   ++  + + + +      L +   +K + 
Sbjct: 573  THPQGDDTITWLLDYPLIDESFEFPRSIRAHNLEICVAVLRAIHFTCATLGTKYAKKLQI 632

Query: 761  LNYEEALQSVEDLCLEEGKKREALNEFIPKSYESVLRKRREELIEAENGVLLISSRFELD 820
            LNY+ AL   ++LC+ E ++R+ + E    +Y S+L  + EE +  + G    +++  L 
Sbjct: 633  LNYDAALIDAKNLCILEDERRKNVPEDQWNTYASLLCDKCEERLVIDAGD-SHTTKLCLC 692

Query: 821  AVTNVLKEAETLNVNQFGYQETFASVSPQLGDLESGEDEERRAKDYLHEVDTCIEVAIQR 880
            AV +VL++A            TF     +  DL   ED       + +  D  +  +I  
Sbjct: 693  AVRDVLEKAS---------HPTF-----EFSDL---EDCMTLIHGHKNLNDDTVLKSIDL 752

Query: 881  QKEQLSIEISKIDARIMRNVTGMQQLELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEK 940
             K  ++ ++   D++I+        L   L  +S  DY+S +L L+  Y R  L+++ + 
Sbjct: 753  LKSVVTNKVPVADSKILLIENSRTNLLNDLVKLSVFDYRSYILHLLKRYQRDELDEIVDM 812

Query: 941  DATKKSDAASEAFLAELALDSKKGIRGGTDNSRHAHEKPKEKKRSKEFRKVKDSKVVSGP 1000
            DA  K  AA    L+E     +KG + G++  ++   K      SK+   V +S V   P
Sbjct: 813  DAKTKLAAAQAEHLSE--EKQEKGKKSGSNKKKNRSNKRTSASMSKD--DVHESSVNLEP 872

Query: 1001 EQDVLRGQAVDGDPFPVSSDGDAAEVDIAVFENVDALRLQEEELRRKIELEADERKLEET 1060
            +            P P S++ D+ E +       D L  +    R ++E+ ++ +  +ET
Sbjct: 873  KVT---------PPSPKSTEEDSMEPE-------DTLSSE----RGRLEISSNTKSQDET 932

Query: 1061 LEYQRRIENEAKQKHLAELQKKSAQTTHNNLAGLVPNVEGADKHFKPSVVDKLAENDLVS 1120
                + +EN   +  L+E                  N+E A K        K+   +   
Sbjct: 933  ---AKDMENMPGEDLLSE------------------NLESAHK--------KVTRYNSAL 992

Query: 1121 DLSGNGPAMRNALSGVSNVGVIENSLPSSDRKKGRKGRRHKVSIKPVDGNQPSPSDKDNV 1180
            D++         L  + N+ V++                                  +++
Sbjct: 993  DMT---------LKALLNIKVLQ----------------------------------EDL 1052

Query: 1181 AFDNQLTEQVRYHGNPLQDSVNPLLEDNSTKTSRQHVEDEEERFQADLKKAVRQSLDAFQ 1240
              + QL     +HGN L++ V   L+D  +    + ++++E                   
Sbjct: 1053 VHNRQL-----FHGN-LEEQVPCALKDFFSAVVSEQIKEDE------------------- 1104

Query: 1241 EQQKLPLIMSSRTPLISHGEVDSNGLPSNERNVENVQAAGMFGTGLKNEVGEYNCFLNVI 1300
                                                                Y+  L+ +
Sbjct: 1113 ---------------------------------------------------LYSYLLSNL 1104

Query: 1301 IQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFAALNKASADSRREAVAPTSLRV 1360
            + SL                E VH                                    
Sbjct: 1173 LASL----------------EEVH------------------------------------ 1104

Query: 1361 ALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTAGSSVSDTDTVESNCIGSWDCSSD 1420
            +LS              +DA EV+  I + LH                      W     
Sbjct: 1233 SLS--------------SDADEVVVTILEFLHW---------------------WKSPEK 1104

Query: 1421 TCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTTKVMCSESSFDELLNV 1480
              LV  +F ++ +ERM C  C     + + +S+   + A+++R  K       F+E+L V
Sbjct: 1293 ESLVTRLFTLEEYERMRCTKCRRNPNYPEQSSYGIVMAANSIRNLKCAFGNMKFEEILTV 1104

Query: 1481 VEMNHQLVCDQDVGGCGKLNYIHHFLSAPPHVFTTVLGWQKTCESADDITETLAALSTEI 1540
            + M  +++CD   GGCGK N++HH LS  P +FT VL W+K  E+  +I+ET  AL+ EI
Sbjct: 1353 IRMEDEMICDVKTGGCGKTNFVHHVLSRCPPIFTIVLEWEKN-ETETEISETAKALAWEI 1104

Query: 1541 DVSVLYRGL-DPKNVHNLVSVVCYYGQHYH-CFAYSC 1574
            D+S LY GL +P   + LVS+V     H H C+ + C
Sbjct: 1413 DISRLYEGLEEPNTNYRLVSMVYLKQGHKHFCYLFFC 1104

The following BLAST results are available for this feature:

BLAST of CmaCh11G001670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BL06	7.3e-37	33.43	Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Mus musculus OX=10090 GN=Us...	[more]
Q70EL1	3.6e-36	32.85	Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Homo sapiens OX=9606 GN=USP...	[more]
Q70EK8	6.2e-36	31.87	Inactive ubiquitin carboxyl-terminal hydrolase 53 OS=Homo sapiens OX=9606 GN=USP...	[more]
Q6IE24	8.1e-36	32.56	Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Rattus norvegicus OX=10116 ...	[more]
P15975	8.9e-35	31.29	Inactive ubiquitin carboxyl-terminal hydrolase 53 OS=Mus musculus OX=10090 GN=Us...	[more]

BLAST of CmaCh11G001670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47910.1	0.0e+00	57.38	Ubiquitin carboxyl-terminal hydrolase-related protein	[more]
AT3G47910.2	0.0e+00	57.34	Ubiquitin carboxyl-terminal hydrolase-related protein	[more]
AT3G47890.1	0.0e+00	57.95	Ubiquitin carboxyl-terminal hydrolase-related protein	[more]
AT1G65120.2	2.3e-46	20.99	Ubiquitin carboxyl-terminal hydrolase-related protein	[more]
AT1G65120.1	9.5e-40	21.02	Ubiquitin carboxyl-terminal hydrolase-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..139
None	No IPR available	COILS	Coil	Coil	coord: 1032..1068
None	No IPR available	COILS	Coil	Coil	coord: 1212..1232
None	No IPR available	GENE3D	3.90.70.10	Cysteine proteinases	coord: 1266..1613 e-value: 3.2E-33 score: 117.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 964..996
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1140..1177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 962..996
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1193..1208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1193..1215
None	No IPR available	PANTHER	PTHR22975	UBIQUITIN SPECIFIC PROTEINASE	coord: 1..1615
None	No IPR available	PANTHER	PTHR22975:SF28	INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE	coord: 1..1615
None	No IPR available	CDD	cd02257	Peptidase_C19	coord: 1374..1612 e-value: 1.68143E-14 score: 73.2862
IPR006865	Domain of unknown function DUF629	PFAM	PF04780	DUF629	coord: 341..874 e-value: 1.9E-155 score: 518.0
IPR006866	Domain of unknown function DUF627, N-terminal	PFAM	PF04781	DUF627	coord: 71..181 e-value: 4.5E-32 score: 110.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 62..202 e-value: 3.7E-8 score: 35.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 71..181
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 1282..1591 e-value: 6.1E-23 score: 81.7
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 398..419
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 1282..1614 score: 21.592081
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 1282..1612

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G001670.1	CmaCh11G001670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004843	thiol-dependent deubiquitinase