CmaCh11G001600 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G001600
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionmicrotubule-associated protein futsch-like
LocationCma_Chr11: 826825 .. 829789 (+)
RNA-Seq ExpressionCmaCh11G001600
SyntenyCmaCh11G001600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCGGAGCGGGGGAGAGAGCGGAGACTTCTACTTTTGAATTCCAGAGAGAAGCTGAGCCATGGAAGAACCCATCAAGGAGCAGCAATCCACTCCACTTCCAGGTTTAATTTGCTGAATTCCCTTCTGTAAATTTATGCCTGCTGTTTTAATTCTCTTTCTTAGCTGATTTTTTCCCCTTTTGGTTTGGATGAGTTAGGGAATTCAGCGAGACCCAAGCTTCAGCGCTATGCTTTGCGATCGGGGACTAAATCGAAGGAGGAGATGCCTCCTGTGCCTGAATTGTCGAATCCGCCTTCTTCTGCCTCTAAAAGGTGGTTTACTCTGTTTATTTCTAACCCTAATTTACTTGTTTCGCGCGATTGGTGTTTATGCGTTTAGTTGCTCCTTTAATTTCTCTATGATGATGTTTCTGTGTTAACTGATTTCATATGATGGGAGGTTTTGTTGATCAATAGATTTTACTTTAATTTGGCTTGATCGTGTTTGATACTCTCAAATAACTGTCACAAATCTTTACAACCGATAAACTGTGATGTTGATCAATGGAAAATCCACGATTTCTCCTCATAGTTCCATAGTTTTGATGATAGTGCTATTTGCTTTGGCATTTTATATGTCGTTGCTGTCGCCTGTTGACTAATTGGGGAATGCTTAAGATTAAATCGATTCTTAGCAGTTTCCTTTCGTATTGGGTAATGGTGTCTACCTATGTTCTTCTCTCGTTCGGAAATTGAATATTGTGAATTGATATGAACTAAAAGACATCAATCATACTATATGCTTCAATGAAGATGTGAAGAAAAGGTTGTCAAAATTATCAAAAGATGTTTCAATTCATGTCACATTGAAGAAGAATGAAGTTTGATTCTTATAAATTTTGGGTGGGTTACAATTTAGAGTAATTTAGAGTCATTTGGTATTTTAAGACTTTTTATTTACTTTAGGTTATAATTACATAATGACGAATTATGGCCATTAAGTATGAATGTTACAACAATTGTAATACCTCTAATAGTTTCATTTTGAGGCTATATAAAGACATGTATGTTGTATTTGTAAGCAGACTTGGAAAATATAGTAAAAGAAGCATTTGTGCTCTTCTTTAGCCAATTGTTAAGTTTCTTTGCAATTCTATGTAGTTTAGGTTACATGTAGAATTATTCAAGCTCGACATGATCAATTTTGTTTGTGGAGTGATTCGAATCTCAAGCAAGTGTTCTTGCCTTGAGATATTTGATCAACAAGAATCATTCAAGCTAGACATGATCGATCTTGCTTGTGGGGTGATTCGAATCTCAAACAATGTTCTTGCCTTGAGATATTCGATCAACAAGGTAATTCGAATCTTAATCCTCTTGTAGTGGTTCCTTATCTTATCATGAATCTTCCTTCCATTTATCATAACTATCTACACCTTTAGCTAAACTTTGTGCAGCATCTAACTGTGCTGTTTGACCTTATTCATCAATTCTTGTCTGTTTAAAGCACTAAAGATTGATTTATTGTTTGTTGGAGTTACAGGGGTAGAACTATATCCAGTGTGAGTAAAAGTATTGGAGTTCTTGATCTATCTGCCAAGGACAAGTCGGCTAAACCACCAAGAAGACTGTCAATTCCGACTAAAAATGTAAGCCCAACTCGAAAATTAGTTGGCAACATTACACCAATATCCGAGGTCCGGAGGACTGCGAGGAACCAGGGGAAAAGTGACACTCCTGTTTCTGACGTTTCACGGTCGTCAAGCAGAAAAACATTCAACATTCTGTGTTCTACATCATATTGGCTATCACAGATCAAGCTCTCTGAAGCTGCTTCTAAGCATTCGGTGTCACTTGGGTTTTTCAAACTTGCATTAGAGGCAGGGTGCAAGGTAATAATAATGTTTTCTGAAACTCTTCTTTGGTCTGTTTGAGTCTGACCCAGCTTGCAATTATGGAAGTTTCGTTTCTTTATGTTAACTCTATATTTATAAAAAACAGCCTCTTCACCGAATGCGTGATGAACTCAAGGCCTACATAGATCGGTGCAATCTTAATGCAAGTGAACAAGCAGTGAAAGATTTGCTTGAAAGCTACAATGCAGCAGAAGAGACAGAGCAAGTGCAGGTTTCTGAAACCTTTTCTCAGGGGCCTGAAGTGGGAACAAGGTCTTCAGATGATGAAGTTCATAGCTCTTCCTCCACAGTGGAGCCTAGAAATCTCAAACCAAAATCCTTAAGCACTGATGTTACTAAAACTCCCAGGAATCGGGGCCTCTGGAACAAAAATGCTGCTCCAAATTCAACTTCAGAGACAGCGAAAAAACCTGTGAAGAAACCCCAAAGGCCAAACAAGCAAGAACCCATTCAAGGAAAGGAAAAATCCAAGAAACAGGTGAAGAAACAGCTCAGCGAGAAAGGTAAGTACAATACAATGATTCTATACAGTTCCAATCATTTACTACAACATTGCATACTGAAATTTTTATATTTGTTAACAGTTCCAGCCAGCACGAGTCCTGAAGAAGATTCAGTGCAATCAAACAAAGAAAATTTGGTATAGCGATTCTTTTTCCTCTAACCTTAAGCTCCTCAATCCAATTCGTTTCCTATATCTCTTCAAATCATGATGTGAACTGTCGTCCTTGCAGGAGGCTCCCCAAATTGAAGTGACATCGACAGAAGAAGTGATATAAAGATGAGGGATTCTGTTTGGTTTTTGTAATTTGTGTGGGTTTTGAAGTGGGGTGATGAAGTGAAAGTGTCAGCCTTTGTCATTTGGTGCGTGCTTTCTTCTTGTTATAAACATAATAGTTTATACATATATATACATGAGGCATTACTATCATCAATTGTACTGGAATCTATGGTAGTTGATTCATTGTTGCTAAAGCGTTTCAGCTTGGATTTTGTAAATCACGCTGCTGTGCTAATGATGTATATATTTTGGACCAATTATAACTTTACAAGTGTCCTTAAGTTGAAT

mRNA sequence

AATCGGAGCGGGGGAGAGAGCGGAGACTTCTACTTTTGAATTCCAGAGAGAAGCTGAGCCATGGAAGAACCCATCAAGGAGCAGCAATCCACTCCACTTCCAGGGAATTCAGCGAGACCCAAGCTTCAGCGCTATGCTTTGCGATCGGGGACTAAATCGAAGGAGGAGATGCCTCCTGTGCCTGAATTGTCGAATCCGCCTTCTTCTGCCTCTAAAAGGGGTAGAACTATATCCAGTGTGAGTAAAAGTATTGGAGTTCTTGATCTATCTGCCAAGGACAAGTCGGCTAAACCACCAAGAAGACTGTCAATTCCGACTAAAAATGTAAGCCCAACTCGAAAATTAGTTGGCAACATTACACCAATATCCGAGGTCCGGAGGACTGCGAGGAACCAGGGGAAAAGTGACACTCCTGTTTCTGACGTTTCACGGTCGTCAAGCAGAAAAACATTCAACATTCTGTGTTCTACATCATATTGGCTATCACAGATCAAGCTCTCTGAAGCTGCTTCTAAGCATTCGGTGTCACTTGGGTTTTTCAAACTTGCATTAGAGGCAGGGTGCAAGCCTCTTCACCGAATGCGTGATGAACTCAAGGCCTACATAGATCGGTGCAATCTTAATGCAAGTGAACAAGCAGTGAAAGATTTGCTTGAAAGCTACAATGCAGCAGAAGAGACAGAGCAAGTGCAGGTTTCTGAAACCTTTTCTCAGGGGCCTGAAGTGGGAACAAGGTCTTCAGATGATGAAGTTCATAGCTCTTCCTCCACAGTGGAGCCTAGAAATCTCAAACCAAAATCCTTAAGCACTGATGTTACTAAAACTCCCAGGAATCGGGGCCTCTGGAACAAAAATGCTGCTCCAAATTCAACTTCAGAGACAGCGAAAAAACCTGTGAAGAAACCCCAAAGGCCAAACAAGCAAGAACCCATTCAAGGAAAGGAAAAATCCAAGAAACAGGTGAAGAAACAGCTCAGCGAGAAAGTTCCAGCCAGCACGAGTCCTGAAGAAGATTCAGTGCAATCAAACAAAGAAAATTTGGAGGCTCCCCAAATTGAAGTGACATCGACAGAAGAAGTGATATAAAGATGAGGGATTCTGTTTGGTTTTTGTAATTTGTGTGGGTTTTGAAGTGGGGTGATGAAGTGAAAGTGTCAGCCTTTGTCATTTGGTGCGTGCTTTCTTCTTGTTATAAACATAATAGTTTATACATATATATACATGAGGCATTACTATCATCAATTGTACTGGAATCTATGGTAGTTGATTCATTGTTGCTAAAGCGTTTCAGCTTGGATTTTGTAAATCACGCTGCTGTGCTAATGATGTATATATTTTGGACCAATTATAACTTTACAAGTGTCCTTAAGTTGAAT

Coding sequence (CDS)

ATGGAAGAACCCATCAAGGAGCAGCAATCCACTCCACTTCCAGGGAATTCAGCGAGACCCAAGCTTCAGCGCTATGCTTTGCGATCGGGGACTAAATCGAAGGAGGAGATGCCTCCTGTGCCTGAATTGTCGAATCCGCCTTCTTCTGCCTCTAAAAGGGGTAGAACTATATCCAGTGTGAGTAAAAGTATTGGAGTTCTTGATCTATCTGCCAAGGACAAGTCGGCTAAACCACCAAGAAGACTGTCAATTCCGACTAAAAATGTAAGCCCAACTCGAAAATTAGTTGGCAACATTACACCAATATCCGAGGTCCGGAGGACTGCGAGGAACCAGGGGAAAAGTGACACTCCTGTTTCTGACGTTTCACGGTCGTCAAGCAGAAAAACATTCAACATTCTGTGTTCTACATCATATTGGCTATCACAGATCAAGCTCTCTGAAGCTGCTTCTAAGCATTCGGTGTCACTTGGGTTTTTCAAACTTGCATTAGAGGCAGGGTGCAAGCCTCTTCACCGAATGCGTGATGAACTCAAGGCCTACATAGATCGGTGCAATCTTAATGCAAGTGAACAAGCAGTGAAAGATTTGCTTGAAAGCTACAATGCAGCAGAAGAGACAGAGCAAGTGCAGGTTTCTGAAACCTTTTCTCAGGGGCCTGAAGTGGGAACAAGGTCTTCAGATGATGAAGTTCATAGCTCTTCCTCCACAGTGGAGCCTAGAAATCTCAAACCAAAATCCTTAAGCACTGATGTTACTAAAACTCCCAGGAATCGGGGCCTCTGGAACAAAAATGCTGCTCCAAATTCAACTTCAGAGACAGCGAAAAAACCTGTGAAGAAACCCCAAAGGCCAAACAAGCAAGAACCCATTCAAGGAAAGGAAAAATCCAAGAAACAGGTGAAGAAACAGCTCAGCGAGAAAGTTCCAGCCAGCACGAGTCCTGAAGAAGATTCAGTGCAATCAAACAAAGAAAATTTGGAGGCTCCCCAAATTGAAGTGACATCGACAGAAGAAGTGATATAA

Protein sequence

MEEPIKEQQSTPLPGNSARPKLQRYALRSGTKSKEEMPPVPELSNPPSSASKRGRTISSVSKSIGVLDLSAKDKSAKPPRRLSIPTKNVSPTRKLVGNITPISEVRRTARNQGKSDTPVSDVSRSSSRKTFNILCSTSYWLSQIKLSEAASKHSVSLGFFKLALEAGCKPLHRMRDELKAYIDRCNLNASEQAVKDLLESYNAAEETEQVQVSETFSQGPEVGTRSSDDEVHSSSSTVEPRNLKPKSLSTDVTKTPRNRGLWNKNAAPNSTSETAKKPVKKPQRPNKQEPIQGKEKSKKQVKKQLSEKVPASTSPEEDSVQSNKENLEAPQIEVTSTEEVI
Homology
[Close]
BLAST of CmaCh11G001600 vs. TAIR 10
Match: AT5G62550.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink). )

HSP 1 Score: 159.5 bits (402), Expect = 4.9e-39
Identity = 135/360 (37.50%), Postives = 200/360 (55.56%), Query Frame = 0 

Query: 1   MEEPIKEQQSTPLPGNSARPKLQRYALRSGTKSKEEMPPVPELSNPPSSASKRGRTISSV 60
           ME+ +++  S+   GNS   KL RY LRS  +SKE  PPVP+ S   SS  +R R +S+V
Sbjct: 1   MEKSMEKSVSSAASGNSINSKL-RYPLRSALRSKEGKPPVPDFS--ASSMPRRARVVSAV 60

Query: 61  SKSIGVLDLSAK---DKSAKPPRRLSIPTK--NVSPTRKLVGNITPISEV-----RRTAR 120
           S+S  VLDLS K   D++  PPRRLSIP K  + S  + +  ++T +SEV     R   R
Sbjct: 61  SQSTTVLDLSGKKSVDRTKLPPRRLSIPNKPTSNSSVKSVSSSVTSLSEVKPKRSRIVPR 120

Query: 121 NQGKSDTPVSDVSRSS-SRKTFNILCSTSYWLSQIKLSEAASKHSVSLGFFKLALEAGCK 180
           +  ++ TPVS   RSS +RK    L S++YWL+ IKL+E+ +KHS+SLGFFKLAL AGC+
Sbjct: 121 SFNETTTPVSSNLRSSVTRKKVEDLSSSTYWLTHIKLAESVAKHSISLGFFKLALHAGCE 180

Query: 181 PLHRMRDELKAYIDRCNLNASEQAVKDLLESYNAAEETEQVQVSETFSQGPEVGTRS--S 240
           PL +M++ELK Y  R N++    A+K+L E YN +EE+ QVQVSET S   E    S  +
Sbjct: 181 PLDKMKEELKLYARRNNMDGLADAMKELSELYNISEESNQVQVSETSSVVAEETAMSLNN 240

Query: 241 DDEVHSSSSTVEPRNLKPKSLSTD------VTKTPRNRGLWNKNAAPNSTSETAKKPVKK 300
           D++V SS ST    N+  +    D      VTKT + +     ++   +T E        
Sbjct: 241 DNDVQSSFSTPGNSNITSEITKDDALQDSTVTKTTKEKDALQDSSVTETTKEKDALQDSS 300

Query: 301 PQRPNKQEPIQGKEKSKKQVKKQ--LSEKVPASTSPEEDSVQSNKENLEAPQIEVTSTEE 340
               +K+E         +  K++  L +     T+ EE ++++  +      +EV +  +
Sbjct: 301 VTETSKEEGALQDSSVTETTKEEDALQDSSVTETTKEEQALETVTQGRTRKSLEVINVNQ 357

The following BLAST results are available for this feature:
BLAST of CmaCh11G001600 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh11G001600 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G62550.14.9e-3937.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..224
NoneNo IPR availablePANTHERPTHR34468MICROTUBULE-ASSOCIATED FUTSCH-LIKE PROTEINcoord: 1..337
NoneNo IPR availablePANTHERPTHR34468:SF2MICROTUBULE-ASSOCIATED FUTSCH-LIKE PROTEINcoord: 1..337

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G001600.1CmaCh11G001600.1mRNA