CmaCh11G001430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G001430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RWP-RK domain-containing protein
Location	Cma_Chr11: 765229 .. 768191 (-)
RNA-Seq Expression	CmaCh11G001430
Synteny	CmaCh11G001430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCACTGTTCATTACTCAAAATCCAAAACTGATCTCTTTCTTGCATGATTTCGTTATCTGTTCATGCGCTCTGATACTGGTTTTACGCTTCATTGGCTGCGCACCTTCTCCAATGCCTTCTCCCTTAAATTCTTTCCCTTTTCTTCTTCCCCTTCAATTTTCCAACTCTTTTGGTGAAGAGGAAATGGACCCTTTTCCTTCGTCATGCCATCTTTCCCCTCTCCATTTCAGGTGAGTTTTATGAACTTTCATTGTTCATTTAGTCTTCGTTTCTCATTTCATTTAGAACCTACAATTCTGCATTGAATAGGAGCTGCAATTTTGGGTTTCAAGACAGCATTTTTGACGTTGTTCCATTGTTTGAGACATGCCCAAATGACTCCTTTTTGGTTCTAAAGGATATTGAACCCATTAACACCATTATATCAGGTATGAATTACATTACATTGCTCTTGATTATGATTATATATTTGTCACTGAAAGATAGAATCTTTTTGGCTCTGCAGAAGATGGTGGAGAAAATGAAAAGAATGGATTAGAGAGGAAAGAAGGGAGGGGCAAAAGGAAGTGGTGCGGAGAAACGAGCAGCAGCCCATCAAAAGGTTTGTCAAGAAAGACAATATCTGAGTACTTCTGGATGCCCATAAGTCAGGCCGCTAAGGAATTGAATGTGGGGCTCACTCTGTTGAAGAAGAGGTGTAGAGAATTGGGCATAAGGAGATGGCCTCATAGGAAGTTGATGAGCCTCCAAACGCTAATCAAGAATGTGAAGGAGCTTGAGAAAGAAGATGGAGTGAAGCTAAGGCATGTATTGGAGATATTAGAGAATGAGAAGAAGTTAATGGAAGAGAGACCGGATTTACAGTTAGAGGACAACACGAAGAGGCTTAGACAAGCCTGCTTCAAGGCCAACTACAAGAAAAAAAGGCTGTCCGGAACGAACAACTCCTCAGCCACCAGGGTTCTTCAGGATGATGAAGAAGAAGAAGAAGAAGATGAAGAAATGAAGTATCTGTTGGCGGATTGCTCATTTTCATTCACTGGTGGCAGCCTGTTGCTGTACTAAAACCAGCATCAACTTCAATTCAATTCAGGGTTTCATCTTTATATCTTTTGTGAGGATGATTAGAAATCACAAACCTCCATAAGAATGCCAAGCCCACTCTAACGACCTTGTAATCTCTCCTCCCATCTCATTTCATCTTTCCTCTCCTTTTCCACCCTCACTCTCTCTCATGTCTCTCTTGTGGTTAAGGTTGTCATCTCTTATGTCTCTCTTTTGGTTAAGGTTATTAAACCTGTGGACCACAGCACGGCCAAGTCTATCAACTCGGAGGTGCACTCAGATTGCAGGTATTGCATGAAGCTGAAATATCATTTGAAGTGCACAGTCGAAACAACCGTATGTTATTACAAAATTTTCAATTACTAGCACATTATTACATTCTTCTGATAATCTACGGCAGCAGTAAATGTCTGCAACAGAAGTTCTCCACCAGATGGGGTTAACATGAAAACATACAAACTACTAAACAAAAAGAAAAGCCGCAAACTGATGCTTAGGATTCATTGCAACTCTCCAACCACGTTATGAAAAAACAGGGTATTAAGCCGCCACAGCTTCCTTCTGAGCAAAACCAATGCCCTTCTCAATGCTCGCCTTCAGTTCTGTCTTTAGAGCTTCAAGAGCCTTCTGCTCGTACTCAGACAATCCCTGAAGCTCAGATTTTACAAAGCCTTCAATTCCTTGCCTCCCTAGCTTAACCCTCGATGCAAAGAAGGGAAGATCGGTTAGATCAGACTGCACGAAAGAGCACTCATATACATCGCCGTCTCCATCCAAAGCACGAAGAGATGATTCGACAAATCTTGCTGCAGCGTATGCCATTGAAAGGGTAGCCGATCCAGCTCCTGCCTTCGCTTCCACGACTTCAGTTCCCGCATTTTGAATTCTAACAGTTAGTTCCTGAATTTCTTCGTCTGTAAAGCTCGCTGAAGGTCTTGTCTTTGACAGCAAGGGAAGTATTGTTATACCCGCATGTCCACCAATGACTGGGACGTCAACGTCAATCAGCTTAAGGTTCTTTCTTTCAGCAACAAAAGTGTTTGCCCGGACAACATCCAATGTAGTCACTCCAAAAAGTTTCTTTGAATCATACACGCCCTTCTTCTTCAGAACTTCAGCTGCTATTGGCACAGTGGAGTTCACAGGGTTGCTGATGATATGAATGAAGGCATCAGGACAGTTATCAGCAACAGCCTCGACCAAACTCTTAACTATGCCAGCATTAATATTGAATAGGTCATCACGAGTCATACCGGGCTTTCTTGGAACCCCAGCAGGTATGACAACAACATCTACACCTTTCAAGGCATTGCCTAATTCAGAAGGTCCTGTGAAATCCTGAACTTTTGAGGGAGTGTTGCAGTGGCTAATGTCAGCAGCAACACCCTTGACATTAGCAATATCATAGAGGTTCAAGGTGGAAACTAATGGAGACATCTTGATGAGAAGCGACAAAGGTTGACCTATCCCTCCAGCAGCGCCAAGAACAGCAACCTTGTAAGACGCTTGAGGTTGAAGTTTTTTGTATACATTCTGGTTCGCATTTTGAGATGAGGTAGCGTGACGACGCCATAAAGCGGCACTGCTCTGTTTCCCTAGGAAAGATGACTCCGATTCACAACCAAGAGATGAAGCAGCCTTGAGGCCACAGAAGCTCTTAAAAGTCTCTTGTGAATTGATCCTTAAGCTAGCAGACTTTGACTGGGAAAATGAGTTGAGTTTAGTATTAAGTGATGCATTTGTTCCAATAGACAAAATAGTTGCGGAAGTTGCTGCCATATCTGACTCTGTTAAAGAAAGGGGGGAGGCAGAAAGCGTCAGTCATTTTCATGATCTGGTGTTCTCCAAGAATACAAAACAATAATTTCTAAACTCCCCAAGAGGACTCTAAT

mRNA sequence

ATGATTTCACTGTTCATTACTCAAAATCCAAAACTGATCTCTTTCTTGCATGATTTCGTTATCTGTTCATGCGCTCTGATACTGGTTTTACGCTTCATTGGCTGCGCACCTTCTCCAATGCCTTCTCCCTTAAATTCTTTCCCTTTTCTTCTTCCCCTTCAATTTTCCAACTCTTTTGGTGAAGAGGAAATGGACCCTTTTCCTTCGTCATGCCATCTTTCCCCTCTCCATTTCAGGAGCTGCAATTTTGGGTTTCAAGACAGCATTTTTGACGTTGTTCCATTGTTTGAGACATGCCCAAATGACTCCTTTTTGGTTCTAAAGGATATTGAACCCATTAACACCATTATATCAGAAGATGGTGGAGAAAATGAAAAGAATGGATTAGAGAGGAAAGAAGGGAGGGGCAAAAGGAAGTGGTGCGGAGAAACGAGCAGCAGCCCATCAAAAGGTTTGTCAAGAAAGACAATATCTGAGTACTTCTGGATGCCCATAAGTCAGGCCGCTAAGGAATTGAATGTGGGGCTCACTCTGTTGAAGAAGAGGTGTAGAGAATTGGGCATAAGGAGATGGCCTCATAGGAAGTTGATGAGCCTCCAAACGCTAATCAAGAATGTGAAGGAGCTTGAGAAAGAAGATGGAGTGAAGCTAAGGCATGTATTGGAGATATTAGAGAATGAGAAGAAGTTAATGGAAGAGAGACCGGATTTACAGTTAGAGGACAACACGAAGAGGCTTAGACAAGCCTGCTTCAAGGCCAACTACAAGAAAAAAAGGCTGTCCGGAACGAACAACTCCTCAGCCACCAGGGTTCTTCAGGATGATGAAGAAGAAGAAGAAGAAGATGAAGAAATGAAGTATCTGTTGGCGGATTGCTCATTTTCATTCACTGGTGGCAGCCTGTTGCTGTACTAAAACCAGCATCAACTTCAATTCAATTCAGGGTTTCATCTTTATATCTTTTGTGAGGATGATTAGAAATCACAAACCTCCATAAGAATGCCAAGCCCACTCTAACGACCTTGTTATTAAACCTGTGGACCACAGCACGGCCAAGTCTATCAACTCGGAGGTGCACTCAGATTGCAGGTATTGCATGAAGCTGAAATATCATTTGAAGTGCACAGTCGAAACAACCGTATGTTATTACAAAATTTTCAATTACTAGCACATTATTACATTCTTCTGATAATCTACGGCAGCAGTAAATGTCTGCAACAGAAGTTCTCCACCAGATGGGGTTAACATGAAAACATACAAACTACTAAACAAAAAGAAAAGCCGCAAACTGATGCTTAGGATTCATTGCAACTCTCCAACCACGTTATGAAAAAACAGGGTATTAAGCCGCCACAGCTTCCTTCTGAGCAAAACCAATGCCCTTCTCAATGCTCGCCTTCAGTTCTGTCTTTAGAGCTTCAAGAGCCTTCTGCTCGTACTCAGACAATCCCTGAAGCTCAGATTTTACAAAGCCTTCAATTCCTTGCCTCCCTAGCTTAACCCTCGATGCAAAGAAGGGAAGATCGGTTAGATCAGACTGCACGAAAGAGCACTCATATACATCGCCGTCTCCATCCAAAGCACGAAGAGATGATTCGACAAATCTTGCTGCAGCGTATGCCATTGAAAGGGTAGCCGATCCAGCTCCTGCCTTCGCTTCCACGACTTCAGTTCCCGCATTTTGAATTCTAACAGTTAGTTCCTGAATTTCTTCGTCTGTAAAGCTCGCTGAAGGTCTTGTCTTTGACAGCAAGGGAAGTATTGTTATACCCGCATGTCCACCAATGACTGGGACGTCAACGTCAATCAGCTTAAGGTTCTTTCTTTCAGCAACAAAAGTGTTTGCCCGGACAACATCCAATGTAGTCACTCCAAAAAGTTTCTTTGAATCATACACGCCCTTCTTCTTCAGAACTTCAGCTGCTATTGGCACAGTGGAGTTCACAGGGTTGCTGATGATATGAATGAAGGCATCAGGACAGTTATCAGCAACAGCCTCGACCAAACTCTTAACTATGCCAGCATTAATATTGAATAGGTCATCACGAGTCATACCGGGCTTTCTTGGAACCCCAGCAGGTATGACAACAACATCTACACCTTTCAAGGCATTGCCTAATTCAGAAGGTCCTGTGAAATCCTGAACTTTTGAGGGAGTGTTGCAGTGGCTAATGTCAGCAGCAACACCCTTGACATTAGCAATATCATAGAGGTTCAAGGTGGAAACTAATGGAGACATCTTGATGAGAAGCGACAAAGGTTGACCTATCCCTCCAGCAGCGCCAAGAACAGCAACCTTGTAAGACGCTTGAGGTTGAAGTTTTTTGTATACATTCTGGTTCGCATTTTGAGATGAGGTAGCGTGACGACGCCATAAAGCGGCACTGCTCTGTTTCCCTAGGAAAGATGACTCCGATTCACAACCAAGAGATGAAGCAGCCTTGAGGCCACAGAAGCTCTTAAAAGTCTCTTGTGAATTGATCCTTAAGCTAGCAGACTTTGACTGGGAAAATGAGTTGAGTTTAGTATTAAGTGATGCATTTGTTCCAATAGACAAAATAGTTGCGGAAGTTGCTGCCATATCTGACTCTGTTAAAGAAAGGGGGGAGGCAGAAAGCGTCAGTCATTTTCATGATCTGGTGTTCTCCAAGAATACAAAACAATAATTTCTAAACTCCCCAAGAGGACTCTAAT

Coding sequence (CDS)

ATGATTTCACTGTTCATTACTCAAAATCCAAAACTGATCTCTTTCTTGCATGATTTCGTTATCTGTTCATGCGCTCTGATACTGGTTTTACGCTTCATTGGCTGCGCACCTTCTCCAATGCCTTCTCCCTTAAATTCTTTCCCTTTTCTTCTTCCCCTTCAATTTTCCAACTCTTTTGGTGAAGAGGAAATGGACCCTTTTCCTTCGTCATGCCATCTTTCCCCTCTCCATTTCAGGAGCTGCAATTTTGGGTTTCAAGACAGCATTTTTGACGTTGTTCCATTGTTTGAGACATGCCCAAATGACTCCTTTTTGGTTCTAAAGGATATTGAACCCATTAACACCATTATATCAGAAGATGGTGGAGAAAATGAAAAGAATGGATTAGAGAGGAAAGAAGGGAGGGGCAAAAGGAAGTGGTGCGGAGAAACGAGCAGCAGCCCATCAAAAGGTTTGTCAAGAAAGACAATATCTGAGTACTTCTGGATGCCCATAAGTCAGGCCGCTAAGGAATTGAATGTGGGGCTCACTCTGTTGAAGAAGAGGTGTAGAGAATTGGGCATAAGGAGATGGCCTCATAGGAAGTTGATGAGCCTCCAAACGCTAATCAAGAATGTGAAGGAGCTTGAGAAAGAAGATGGAGTGAAGCTAAGGCATGTATTGGAGATATTAGAGAATGAGAAGAAGTTAATGGAAGAGAGACCGGATTTACAGTTAGAGGACAACACGAAGAGGCTTAGACAAGCCTGCTTCAAGGCCAACTACAAGAAAAAAAGGCTGTCCGGAACGAACAACTCCTCAGCCACCAGGGTTCTTCAGGATGATGAAGAAGAAGAAGAAGAAGATGAAGAAATGAAGTATCTGTTGGCGGATTGCTCATTTTCATTCACTGGTGGCAGCCTGTTGCTGTACTAA

Protein sequence

MISLFITQNPKLISFLHDFVICSCALILVLRFIGCAPSPMPSPLNSFPFLLPLQFSNSFGEEEMDPFPSSCHLSPLHFRSCNFGFQDSIFDVVPLFETCPNDSFLVLKDIEPINTIISEDGGENEKNGLERKEGRGKRKWCGETSSSPSKGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKELEKEDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKRLSGTNNSSATRVLQDDEEEEEEDEEMKYLLADCSFSFTGGSLLLY

Homology

[Close]

BLAST of CmaCh11G001430 vs. ExPASy Swiss-Prot
Match: Q9CA66 (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.6e-40
Identity = 121/291 (41.58%), Postives = 158/291 (54.30%), Query Frame = 0


Query: 62  EEMDPFPSSCHLSPLHFRSCNFGFQDSIFDVVPLFETCPNDSF------LVLKDIEP--- 121
           +E   F    H       S ++   D   D++ L E   + +F      L L D+EP   
Sbjct: 7   KEQKSFSFLAHSPSFDHSSLSYPLFDWEEDLLALQENSGSQAFPFTTTSLPLPDLEPLSE 66

Query: 122 --INTIISEDGGENEKN-----GLERKEGRG------KRKWCGE---------------- 181
             +N+  S    E E+N       E+K   G      K++   E                
Sbjct: 67  DVLNSYSSASWNETEQNRGDGASSEKKRENGTVKETTKKRKINERHREHSVRIISDITTY 126

Query: 182 TSSSPSKGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLI 241
           T+SS    LS++T+S YF+MPI+QAA  LNVGLTLLK+RCRELGIRRWPHRKLMSL TLI
Sbjct: 127 TTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLI 186

Query: 242 KNVKELEK----EDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKR 300
            NVKEL+K    E+  KL+  LE+LE EK+ +E+ PDL+ +D TKRLRQACFKAN+K+K+
Sbjct: 187 SNVKELQKMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKK 246

[Close]

BLAST of CmaCh11G001430 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-39
Identity = 103/183 (56.28%), Postives = 126/183 (68.85%), Query Frame = 0


Query: 103 SFLVLKDIEPIN------TIISEDGGEN-------------EKNGLERKEGRGKRKWCGE 162
           SFL L D+EPI+       I+S  G  +             +K+     + R  R+ C  
Sbjct: 61  SFLALPDLEPISIVSHEADILSVYGSASWTAEETMFVSDFAKKSETTTTKKRRCREEC-F 120

Query: 163 TSSSPSKGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLI 222
           +S S SK LS++TIS YF+MPI+QAA+ELN+GLTLLKKRCRELGI+RWPHRKLMSLQ LI
Sbjct: 121 SSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLI 180

Query: 223 KNVKELEKEDGV----KLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKR 263
            NVKELEK +G     KLR+ LE LE EKK +E+ PDL+ ED TKRLRQACFKAN+K+KR
Sbjct: 181 SNVKELEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKR 240

[Close]

BLAST of CmaCh11G001430 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31
Identity = 71/119 (59.66%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 152 LSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKEL-- 211
           +SR+ + +YF+MPI++AAKELN+G+TLLKKRCRELGI RWPHRKL SL  LI N+K+L  
Sbjct: 159 MSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLG 218

Query: 212 ---EKEDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKRLSGTNN 266
               +    KLR+ LE+LE EKK++EE PDL+  D TKRLRQACFKA YK++RL  +++
Sbjct: 219 NTKGRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]

BLAST of CmaCh11G001430 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.2e-26
Identity = 79/193 (40.93%), Postives = 110/193 (56.99%), Query Frame = 0


Query: 76  LHFRSCNFGFQDSIFDVVPLFETCPNDSFLVLK------DIEPINTIISEDGGENEKNGL 135
           LHF+     F+D  F+ + +  T P+D  L+ +      D    + +  ++ G      +
Sbjct: 71  LHFQFHYNSFED-FFENIEVDNTIPSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKV 130

Query: 136 ERKEGRGKRKWCGETSSSPSKGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIR 195
           E+   + KR             L    I ++F  PI +AAKELNVGLT+LKKRCRELGI 
Sbjct: 131 EKVTVKKKR----NLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIY 190

Query: 196 RWPHRKLMSLQTLIKNVKELEKEDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQA 255
           RWPHRKL SL +LIKN+K +  E+ VK       LE  + L+E+ PD +L D TK+LRQA
Sbjct: 191 RWPHRKLKSLNSLIKNLKNVGMEEEVK------NLEEHRFLIEQEPDAELSDGTKKLRQA 250

Query: 256 CFKANYKKKRLSG 263
           CFKANYK+++  G
Sbjct: 251 CFKANYKRRKSLG 252

[Close]

BLAST of CmaCh11G001430 vs. ExPASy Swiss-Prot
Match: O81791 (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14
Identity = 59/169 (34.91%), Postives = 91/169 (53.85%), Query Frame = 0


Query: 111 EPINTIISEDGGENEKNGLERKEGRGKRKWCGETSSSPSK---GLSRKTISEYFWMPISQ 170
           E +N        EN+K   E+ E   K +   +   +PS+    LS + +S+YF + I +
Sbjct: 200 ESVNEKTEHSEFENDKT--EQSESDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTIVE 259

Query: 171 AAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNV-KELEKED------GVKLRHV 230
           A++ L VGLT+LKK+CRE GI RWPHRK+ SL  LI ++ +E EK+        + +   
Sbjct: 260 ASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKK 319

Query: 231 LEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKRLSGTNNSSAT 270
            E LE EK+ + +RP +++   TK+ RQ  FK  ++  R      S  T
Sbjct: 320 QEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASRAKKNQESLVT 366

[Close]

BLAST of CmaCh11G001430 vs. TAIR 10
Match: AT1G74480.1 (RWP-RK domain-containing protein )

HSP 1 Score: 166.0 bits (419), Expect = 4.7e-41
Identity = 121/291 (41.58%), Postives = 158/291 (54.30%), Query Frame = 0


Query: 62  EEMDPFPSSCHLSPLHFRSCNFGFQDSIFDVVPLFETCPNDSF------LVLKDIEP--- 121
           +E   F    H       S ++   D   D++ L E   + +F      L L D+EP   
Sbjct: 7   KEQKSFSFLAHSPSFDHSSLSYPLFDWEEDLLALQENSGSQAFPFTTTSLPLPDLEPLSE 66

Query: 122 --INTIISEDGGENEKN-----GLERKEGRG------KRKWCGE---------------- 181
             +N+  S    E E+N       E+K   G      K++   E                
Sbjct: 67  DVLNSYSSASWNETEQNRGDGASSEKKRENGTVKETTKKRKINERHREHSVRIISDITTY 126

Query: 182 TSSSPSKGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLI 241
           T+SS    LS++T+S YF+MPI+QAA  LNVGLTLLK+RCRELGIRRWPHRKLMSL TLI
Sbjct: 127 TTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLI 186

Query: 242 KNVKELEK----EDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKR 300
            NVKEL+K    E+  KL+  LE+LE EK+ +E+ PDL+ +D TKRLRQACFKAN+K+K+
Sbjct: 187 SNVKELQKMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKK 246

[Close]

BLAST of CmaCh11G001430 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 165.2 bits (417), Expect = 8.0e-41
Identity = 103/183 (56.28%), Postives = 126/183 (68.85%), Query Frame = 0


Query: 103 SFLVLKDIEPIN------TIISEDGGEN-------------EKNGLERKEGRGKRKWCGE 162
           SFL L D+EPI+       I+S  G  +             +K+     + R  R+ C  
Sbjct: 61  SFLALPDLEPISIVSHEADILSVYGSASWTAEETMFVSDFAKKSETTTTKKRRCREEC-F 120

Query: 163 TSSSPSKGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLI 222
           +S S SK LS++TIS YF+MPI+QAA+ELN+GLTLLKKRCRELGI+RWPHRKLMSLQ LI
Sbjct: 121 SSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLI 180

Query: 223 KNVKELEKEDGV----KLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKR 263
            NVKELEK +G     KLR+ LE LE EKK +E+ PDL+ ED TKRLRQACFKAN+K+KR
Sbjct: 181 SNVKELEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRLRQACFKANHKRKR 240

[Close]

BLAST of CmaCh11G001430 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-32
Identity = 71/119 (59.66%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 152 LSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNVKEL-- 211
           +SR+ + +YF+MPI++AAKELN+G+TLLKKRCRELGI RWPHRKL SL  LI N+K+L  
Sbjct: 159 MSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTSLNALIANLKDLLG 218

Query: 212 ---EKEDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKRLSGTNN 266
               +    KLR+ LE+LE EKK++EE PDL+  D TKRLRQACFKA YK++RL  +++
Sbjct: 219 NTKGRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYKRRRLFSSSS 277

[Close]

BLAST of CmaCh11G001430 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-27
Identity = 79/193 (40.93%), Postives = 110/193 (56.99%), Query Frame = 0


Query: 76  LHFRSCNFGFQDSIFDVVPLFETCPNDSFLVLK------DIEPINTIISEDGGENEKNGL 135
           LHF+     F+D  F+ + +  T P+D  L+ +      D    + +  ++ G      +
Sbjct: 71  LHFQFHYNSFED-FFENIEVDNTIPSDIHLLTQEPYFSSDSSSSSPLAIQNDGLISNVKV 130

Query: 136 ERKEGRGKRKWCGETSSSPSKGLSRKTISEYFWMPISQAAKELNVGLTLLKKRCRELGIR 195
           E+   + KR             L    I ++F  PI +AAKELNVGLT+LKKRCRELGI 
Sbjct: 131 EKVTVKKKR----NLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIY 190

Query: 196 RWPHRKLMSLQTLIKNVKELEKEDGVKLRHVLEILENEKKLMEERPDLQLEDNTKRLRQA 255
           RWPHRKL SL +LIKN+K +  E+ VK       LE  + L+E+ PD +L D TK+LRQA
Sbjct: 191 RWPHRKLKSLNSLIKNLKNVGMEEEVK------NLEEHRFLIEQEPDAELSDGTKKLRQA 250

Query: 256 CFKANYKKKRLSG 263
           CFKANYK+++  G
Sbjct: 251 CFKANYKRRKSLG 252

[Close]

BLAST of CmaCh11G001430 vs. TAIR 10
Match: AT4G35590.1 (RWP-RK domain-containing protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-15
Identity = 59/169 (34.91%), Postives = 91/169 (53.85%), Query Frame = 0


Query: 111 EPINTIISEDGGENEKNGLERKEGRGKRKWCGETSSSPSK---GLSRKTISEYFWMPISQ 170
           E +N        EN+K   E+ E   K +   +   +PS+    LS + +S+YF + I +
Sbjct: 200 ESVNEKTEHSEFENDKT--EQSESDAKTEILKKKKRTPSRHVAELSLEELSKYFDLTIVE 259

Query: 171 AAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIKNV-KELEKED------GVKLRHV 230
           A++ L VGLT+LKK+CRE GI RWPHRK+ SL  LI ++ +E EK+        + +   
Sbjct: 260 ASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKK 319

Query: 231 LEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKKRLSGTNNSSAT 270
            E LE EK+ + +RP +++   TK+ RQ  FK  ++  R      S  T
Sbjct: 320 QEKLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASRAKKNQESLVT 366

The following BLAST results are available for this feature:

BLAST of CmaCh11G001430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA66	6.6e-40	41.58	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
Q9M9U9	1.1e-39	56.28	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
Q9FGD1	1.5e-31	59.66	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]
Q9LVU8	3.2e-26	40.93	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
O81791	2.1e-14	34.91	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]

BLAST of CmaCh11G001430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74480.1	4.7e-41	41.58	RWP-RK domain-containing protein	[more]
AT1G18790.1	8.0e-41	56.28	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.0e-32	59.66	RWP-RK domain-containing protein	[more]
AT5G53040.1	2.3e-27	40.93	RWP-RK domain-containing protein	[more]
AT4G35590.1	1.5e-15	34.91	RWP-RK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 152..199 e-value: 3.4E-20 score: 71.8
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 131..219 score: 16.562874
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..140
None	No IPR available	PANTHER	PTHR46373:SF20	PROTEIN RKD1-RELATED	coord: 56..269
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 56..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G001430.1	CmaCh11G001430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity