CmaCh11G001110 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G001110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DUF4228 domain-containing protein
Location	Cma_Chr11: 600134 .. 603062 (+)
RNA-Seq Expression	CmaCh11G001110
Synteny	CmaCh11G001110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTACCTCTCTATCTCTAGTGGCTATAAAAAAAGATTGGTCCTCTTTCCTTGGCCTCCCCTTTTGTTTGTTCATTATCCTCTTCTCCCACAGTTTCATTCCCAGCAGAGAGAGAGAGAGAGAGATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGGTGAGTTTTATATCTACCACCGTTCTTCCTCTTGTTGCTGTCTGTTTTTCATATCCAACCCATAAAATTCTTCAAATCTCTTAATTTTTTAGTCTGAATTTGAATTAATGGCTTCATTTTCTTTGTGGGTTTCAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCACCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGTGAATTTTTTAACAAACATCAAAACAATTCTCAACTTTGAAGGGAGTTCTTTTGACGATTGATTTAATTATAATTGTTTGTAAACGACTGCATAATTTTTGTAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGGTAGCTAATCATTTATGTTCCCTATTTCCCACATGCTATTGAGAGACAGGGTGGCACAGATTGTCCAAGGCTCTTTAAACTTCTCCAAAGAGGGAAAAAAAAAAAAAAAAAAAAAAACAACAGAAAAAGCAGAAAACTGGAGAAAGTGAAAACAAATAAAGATGAGAAGCCAAATGAGCTTTTTAATTCAAGAAGAGAAATTCCTTCAAGAGCAGATCTGGAAGCAAAACAGCATAAAACCGTGCATAGGAAAAGCAGGGTGGGTAACATCTTTGTAAATTCAAAGTCCTTTTCAGTAATGGCTATTGGTCATTGTGCAAAATGAGCTCTGTTTTGATTACCACTCTGTTTCATCTGTTTTAGCAGAATAGAATAGACAAGTGCTTGTGCTTACTCTACTCTGTTGTTTTTGTTGTTATGTTCAATAACATGTAGAGTTGAAGATAAATGTTAAAATGAGTTTAGTTACGTTTAAATTGATTGCAGGGTTCATCTCTCGAGTTCTTTAAAGCTTACAACTCGGGAGAACAGTTGAAGTTGAAGTGACGTGGATTTGCTAGCTAGCTAGCTAGCTTCGTACGGTAATGATTCATTTCCAGCATATTTTCTTGGAACTAATGAAATGGATTAATAATTGTGTCCACTAAATGTAGTTGGAAAGCTATGATTGCTTGGAGTTTAAATGTTACCAAGAAAATCAAATGTTGTAGGGTCAATAGTTTCGTAAAATGATTTGAAACATAGAGGTTAAGATATAATTAAAAAAGGGGAAAAAAGAAATAGAAAAGAGTGAGTCCATGCAAGAAATGAAACCTAAGACAAAATGAGTAAAGATTTAGTGCAATGTGACAGTGCCCCTCGTGCATAGCTACAGTTAAATATCATAATTGTGATCTAATTGGGATGTGATGGATCAGCACTACCCAATTTATTTATATTATTTTTAAACTTTCTCATCATTTTTGTATATATATTTTTTACTCTCATACAATCATTAACTTCATCTTTTTATTTAAAACAAGGGGAATATTCCTCAATGCCCAAACCATCATGATTTTAATAAAGTCTTTCAGATTTCAACCTTTTCTTTTAATTCTCCCTTACTTCAATCCAAAGGAAATTTAGGAGGAGGTGGGCTAGAGTCGAACCCACTAATAGTAGAATGTTTCGTTCTCTTTCCGATTAATATGAGATCTCATAATTCACTCTCGTTCGAGGTTTAACGTTCTCACTGATACTCGTTCCCCTCTTCTCTCACACTTAGGATCAAAAACATATTTGAAGGGGTTGGGGCTCTAAATATTGAAGGGGAGTACCAAAAGTTTTAGAAGAAAGAGATTGCAATTAGGTCCGACGTTGATAGAAAATGTGTGAGTGTAGTAGGAGAGTTGCTGAGGAAAAGGATGAATCTCAAAAACACTATGGAGACGTGGTAGGATAAATGTTGTGTGGTTTGTTGACTGACATATTGGCATGGATAGCTCAAAACCTCGGTGGATTAAACTACCTAAGATGTTACTAAAATGAGACCGATATTGCGCCTCTTTAAGCTTTTTCTTTAGGAAATTCACGGGGAACAATGTAATAGCCCAAGCCCATTGTCCTTTTTAAACCTTTTATTTTGGACTTCCCCTCAGATTTTTAAATTGTGTTTGTTACGGAGAGGTTTTCACACCCTTATAAACAATGTTTCGTTTCTTTTTCTAATCGATGTGGGATTTCATAATCCACTACCCTTCGGGGACCAACATCTTCACTGACACCCGTTTAGCTAATGGAGAAGAAGGTACAAAAGTCAAAATTTTAATGAGGGGTAGAAGAAGAGACATACATATAGATACAGATGTGCAGTCAATTATTATTCTTTCGAAGTGCATCTTCATACTCGTTTTTACTATTCTTGAACATAGAACATCAATCAAC

mRNA sequence

ATGAGTACCTCTCTATCTCTAGTGGCTATAAAAAAAGATTGGTCCTCTTTCCTTGGCCTCCCCTTTTGTTTGTTCATTATCCTCTTCTCCCACAGTTTCATTCCCAGCAGAGAGAGAGAGAGAGAGATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCACCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGATGAGAAGCCAAATGAGCTTTTTAATTCAAGAAGAGAAATTCCTTCAAGAGCAGATCTGGAAGCAAAACAGCATAAAACCGTGCATAGGAAAAGCAGGGGTTCATCTCTCGAGTTCTTTAAAGCTTACAACTCGGGAGAACAGTTGAAGTTGAAGTGACGTGGATTTGCTAGCTAGCTAGCTAGCTTCGTACGGTAATGATTCATTTCCAGCATATTTTCTTGGAACTAATGAAATGGATTAATAATTGTGTCCACTAAATGTAGTTGGAAAGCTATGATTGCTTGGAGTTTAAATGTTACCAAGAAAATCAAATGTTGTAGGGTCAATAGTTTCGTAAAATGATTTGAAACATAGAGGTTAAGATATAATTAAAAAAGGGGAAAAAAGAAATAGAAAAGAGTGAGTCCATGCAAGAAATGAAACCTAAGACAAAATGAGTAAAGATTTAGTGCAATGTGACAGTGCCCCTCGTGCATAGCTACAGTTAAATATCATAATTGTGATCTAATTGGGATGTGATGGATCAGCACTACCCAATTTATTTATATTATTTTTAAACTTTCTCATCATTTTTGTATATATATTTTTTACTCTCATACAATCATTAACTTCATCTTTTTATTTAAAACAAGGGGAATATTCCTCAATGCCCAAACCATCATGATTTTAATAAAGTCTTTCAGATTTCAACCTTTTCTTTTAATTCTCCCTTACTTCAATCCAAAGGAAATTTAGGAGGAGGTGGGCTAGAGTCGAACCCACTAATAGTAGAATGTTTCGTTCTCTTTCCGATTAATATGAGATCTCATAATTCACTCTCGTTCGAGGTTTAACGTTCTCACTGATACTCGTTCCCCTCTTCTCTCACACTTAGGATCAAAAACATATTTGAAGGGGTTGGGGCTCTAAATATTGAAGGGGAGTACCAAAAGTTTTAGAAGAAAGAGATTGCAATTAGGTCCGACGTTGATAGAAAATGTGTGAGTGTAGTAGGAGAGTTGCTGAGGAAAAGGATGAATCTCAAAAACACTATGGAGACGTGGTAGGATAAATGTTGTGTGGTTTGTTGACTGACATATTGGCATGGATAGCTCAAAACCTCGGTGGATTAAACTACCTAAGATGTTACTAAAATGAGACCGATATTGCGCCTCTTTAAGCTTTTTCTTTAGGAAATTCACGGGGAACAATGTAATAGCCCAAGCCCATTGTCCTTTTTAAACCTTTTATTTTGGACTTCCCCTCAGATTTTTAAATTGTGTTTGTTACGGAGAGGTTTTCACACCCTTATAAACAATGTTTCGTTTCTTTTTCTAATCGATGTGGGATTTCATAATCCACTACCCTTCGGGGACCAACATCTTCACTGACACCCGTTTAGCTAATGGAGAAGAAGGTACAAAAGTCAAAATTTTAATGAGGGGTAGAAGAAGAGACATACATATAGATACAGATGTGCAGTCAATTATTATTCTTTCGAAGTGCATCTTCATACTCGTTTTTACTATTCTTGAACATAGAACATCAATCAAC

Coding sequence (CDS)

ATGAGTACCTCTCTATCTCTAGTGGCTATAAAAAAAGATTGGTCCTCTTTCCTTGGCCTCCCCTTTTGTTTGTTCATTATCCTCTTCTCCCACAGTTTCATTCCCAGCAGAGAGAGAGAGAGAGAGATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCACCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGATGAGAAGCCAAATGAGCTTTTTAATTCAAGAAGAGAAATTCCTTCAAGAGCAGATCTGGAAGCAAAACAGCATAAAACCGTGCATAGGAAAAGCAGGGGTTCATCTCTCGAGTTCTTTAAAGCTTACAACTCGGGAGAACAGTTGAAGTTGAAGTGA

Protein sequence

MSTSLSLVAIKKDWSSFLGLPFCLFIILFSHSFIPSREREREMGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNNETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATKHEKNNRPRTSTSTTSAIARSRTWQPSLHSISEADEKPNELFNSRREIPSRADLEAKQHKTVHRKSRGSSLEFFKAYNSGEQLKLK

Homology

[Close]

BLAST of CmaCh11G001110 vs. TAIR 10
Match: AT1G60010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10530.1); Has 185 Blast hits to 185 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 180; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 9.3e-29
Identity = 90/213 (42.25%), Postives = 118/213 (55.40%), Query Frame = 0


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQA+DAA LV+QHP GK+D+ Y PV+  EIM+M PGHYV+L+I      P ++    
Sbjct: 1   MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIP----LPEKNIPAT 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
            T+  +K E             RKV           VR TR+KLLRP + LVLG  YRLI
Sbjct: 61  TTTTDDKSE-------------RKV-----------VRFTRVKLLRPTENLVLGHAYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           TS+EVM  L AKK AK K+ Q E +      KE+    S+        + + E+  +   
Sbjct: 121 TSQEVMKVLRAKKYAKTKKHQSETS------KEKKKPSSE--------KKIDEESDKNQN 171

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
            E  +  + S  T SA +RS+TW+PSL SISEA
Sbjct: 181 LETKDEKQRSVLTNSASSRSKTWRPSLQSISEA 171

[Close]

BLAST of CmaCh11G001110 vs. TAIR 10
Match: AT5G50090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-27
Identity = 91/212 (42.92%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQA+D A +VIQHP+GK +KL  PV+A  +MKMNPGH V+LLISTT ++   S    
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASS---- 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
                                          G    +RLTRIKLLRP DTLVLG VYRLI
Sbjct: 61  -------------------------------GHGGPLRLTRIKLLRPTDTLVLGHVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T+KEVM GL AKK +K+K+    + +K    K   +   D           +ED  Q  K
Sbjct: 121 TTKEVMKGLMAKKCSKLKKESKGSDDKLEMVKAINSTKLD-----------NEDQLQMKK 155

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISE 255
            EK  R R           SR+WQPSL SISE
Sbjct: 181 QEK-ERSRI----------SRSWQPSLQSISE 155

[Close]

BLAST of CmaCh11G001110 vs. TAIR 10
Match: AT5G50090.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 119.0 bits (297), Expect = 6.6e-27
Identity = 85/212 (40.09%), Postives = 105/212 (49.53%), Query Frame = 0


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQA+D A +VIQHP+GK +KL  PV+A  +MKMNPGH V+LLISTT ++   S    
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASS---- 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
                                          G    +RLTRIKLLRP DTLVLG VYRLI
Sbjct: 61  -------------------------------GHGGPLRLTRIKLLRPTDTLVLGHVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T+KEVM GL AKK +K+K               + ++GSD             D  +  K
Sbjct: 121 TTKEVMKGLMAKKCSKLK---------------KESKGSD-------------DKLEMVK 149

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISE 255
              + +             SR+WQPSL SISE
Sbjct: 181 AINSTKLDNEDQEKERSRISRSWQPSLQSISE 149

[Close]

BLAST of CmaCh11G001110 vs. TAIR 10
Match: AT1G10530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60010.1); Has 143 Blast hits to 143 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-23
Identity = 80/214 (37.38%), Postives = 108/214 (50.47%), Query Frame = 0


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQA++AA LV+QHP G +D+ Y  V+  E+M M PGHYV+L+I  +           
Sbjct: 1   MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLIIPLS----------- 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
                          E++E      EK +++    +VR TR++LLRP + LVLG  YRLI
Sbjct: 61  ---------------EEEEKNIPATEKGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           TS+EVM  L  KK AK K+ Q+E    A                    +  S+      K
Sbjct: 121 TSQEVMKVLREKKSAKTKKHQIEKTTTA--------------------KKFSDKKVPEKK 164

Query: 223 HEKNNRP-RTSTSTTSAIARSRTWQPSLHSISEA 256
             K  R  R STS    + +S+TW+PSL SISEA
Sbjct: 181 QGKQFRVIRNSTS----LLKSKTWRPSLQSISEA 164

[Close]

BLAST of CmaCh11G001110 vs. TAIR 10
Match: AT5G62900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 8.4e-22
Identity = 78/215 (36.28%), Postives = 103/215 (47.91%), Query Frame = 0


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQA +AAT VIQ P GK  + Y  V A E++K +PGH+VALL+S+ +          
Sbjct: 1   MGNCQAAEAATTVIQQPDGKSVRFYCTVNASEVIKSHPGHHVALLLSSAV---------- 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
                                              S+R+TRIKLLRP+D L+LG VYRLI
Sbjct: 61  -------------------------------PHGGSLRVTRIKLLRPSDNLLLGHVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQ--SQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQA 222
           +S+EVM G+ AKK  K+K+   +   AE+            +         S S+   Q 
Sbjct: 121 SSEEVMKGIRAKKSGKMKKIHGEFSVAEE------------EINPLTLRSESASDKDTQR 159

Query: 223 TKHEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
             HEK    R   +T  A  + R WQPSL SISE+
Sbjct: 181 RIHEKQ---RGMMNTGGATNKVRAWQPSLQSISES 159

The following BLAST results are available for this feature:

BLAST of CmaCh11G001110 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G001110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60010.1	9.3e-29	42.25	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.1	1.0e-27	42.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G50090.2	6.6e-27	40.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G10530.1	2.6e-23	37.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G62900.1	8.4e-22	36.28	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..253
None	No IPR available	PANTHER	PTHR33413:SF28	DUF4228 DOMAIN PROTEIN	coord: 43..117
None	No IPR available	PANTHER	PTHR33413	EXPRESSED PROTEIN	coord: 43..117
None	No IPR available	PANTHER	PTHR33413:SF28	DUF4228 DOMAIN PROTEIN	coord: 118..255
None	No IPR available	PANTHER	PTHR33413	EXPRESSED PROTEIN	coord: 118..255
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 43..254 e-value: 9.4E-27 score: 94.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G001110.1	CmaCh11G001110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane