CmaCh11G000910 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G000910
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	WD_REPEATS_REGION domain-containing protein
Location	Cma_Chr11: 449164 .. 451690 (+)
RNA-Seq Expression	CmaCh11G000910
Synteny	CmaCh11G000910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGGTTGTTTGATGTTAGTGGCCGAACAAGATGAACCAGTAAGCTGTAGCGAAAATTTTGGATGCTCGCTTCACTGGAGCTGCGTTTTGTTCCATCAATCCCAGAAAGAAAAGGAGTGCTACTTCGATTTCGTCTTGCTTTGCTCTTCAGTTTTAATCTTGTATGACTTTAGATTTCGTTTCTTGAAGCTTAGGTCGTGTAGTAGTTTTTTTTTCTTTTTTTTTTTTTCCTGGCACAGGAGGTGTTCGACAAAAGTCCTCACTGGGAATGAGTAGTTTTTCTGCTAACAAAACTTTGTATTGCGATTCAGGAATGGACGTTGCTCACTGTACTCTAGACGGCAATGCCGACGCAGTGGAATTTTGCCCGCACAGTTCATTTAGTAATGTTCTTGCGGCTTCCACTTATACACTACTAGAGGGTGATCGGCCCAGTCGATCTGGATGCCTATCAATCTTCAATGTCAATGCGGATGATTGCTCTTTGGAGCTGCTTCATCGCGTGGACACGGCTGGAATCTTTGATATAAAGTGGAGCCCTGTTGGTCAAACCATTAGTCCTCTGCTTGCTCAAGCGGATGCTGATGGTTGTATCAGAGTTCATGCCCTTGAGCACTCTTCAAATGGTGCAGAAGGTATGGAAACGAGAAGCTTTTTGTGTCTTACTTTCTGGAAACACGTGGGATGAAGATGCTAAATGTTCTATATTCTATATGCTATTTGAGATTGAATTAAGTATAACATAGACTTTCAAGCCTTACCATGCATCTAAACCTCCTTTTTGCCCCGTGAAGATTATTTTAGAATATTTGTAATCAAGCCCTCGTTTGTTGCGTATTAATATAGCTATATTGTTGGACTTCTTAATGAGTTCTTTTAAGTGGTTCATGACTCAGTGAGCTCATGAATTTTCATCAAGTATTAACTGCAAGATGGGTATTAGTTCTCATGGGGTTCTAGGAAAGAGTCTATAAAGGAAATGGGTTATGGTTTCTACACTAACTAAACCTATTCCCGTTTTCTTACTCCCAACTTGACAAAGAGAGTTCTTAAGTTATGGGTATTGTTTAGTTGAAGAAAATCCTTGCCACCACACGTTAACGATTATGGATGTAGATTATATTTGTTTATCTTTCATTCATGATTCTAACCTTTCAATTTGCATGATTACTTGACTTTCAACTTTAGGTGGAAGTATAAAGCTTCTAAGTTTGAAGTTTTTATTGGTTTTCTTTCCAACATATTTATTTGTTCTTCTTGTTTTTTTTAGTTCGAACATGTGCGAAAAGGCAATTTTAACATCTTACCTCTTGAAAGTACATATGTTTTAACCAAACCAATTTAGCTATGCTTAAGTTGGTATCTATGTTTTCATTTCCAACATATTTATTTATTCTTCTTGTTTTTTTTTAGTTCAACATGCGTGGGGAGGCAATTTCAACGTCTCACTTCTTGAAAGTGTATATGCTTTAACTAGGTTGACATTTATTTTTCATCATAGTGCAGGACAATATTTAAAAGAGAGATGTGGCAGCAAAATCTCTTCCTCTATGTGTCTTTGCTTGGACTGGAACCCTTCGGCCACGTCCATCTCTGTGGGGCATTCAGATGGTTCCATCTCATTACTCTCTGCAGGAGAGTCCCGTTTGGAAGTCCAAAACCAATGGAAAGCTCACGAATTTGAGCTCTGGGCAACATCTTTTGACCCTCACCAACCTCATTTAGTGTACACTGGCTCAGATGACTGCAAATTCAGCTGTTGGGATTTGCGAGACACTCCCACCAAAGCATTTCACAACACTAAAGCTCACAAAATGGGTGTTTGTTGCATCGCCAAATGCCTCAATGACCCTTACAAACTGCTCACTGGCAGCTACGACGAGCACCTGAGAGTGTGGGACATAAGATCAATCTCAAAGCCCACAAATGAAACTTCAATTTGCTTGGGCGGCGGCGTTTGGAGAATCAAGCCCCACCCTTCAGTTTTTGACGTTGTTCTGGCGGCTTGTATGCACAATGGATTTGCAATTGTTAGAGTCAAAGACGATACTGCAGAAGTGGTTGAAACTTATGACAAGCACAGCTCTCTTGCTTACGGAGCTGACTGGCAAAGAGGAGATTCGTCTCATGAAGACGAAAGGAAAAGGTACACTGTTGCAACTTGTTCGTTTTATGATCGGCTTCTCCGGATATGGATTCCAGAAACTGACATATGAGTTCACTCATGTTACTTGATGATGCTTTATGGCACGTGTTTAATTCTTACGGGACTCTATGTTGGTTTCCTTGATAGTTAAATCTTATTGTGATCAATATTGAAGAATTCTTCCAATAATTTCGTGAGTACTTTTAATATGTTTACGAGCGATTTTATATCGTACATGTTTCTGGTGTAGAAGTTGACATTGTTCTTTTCCCTTTTATGGAGATTTTAGTAAGGATGGAGAATGAGTTCAAGCTCGAAATGAAATTGAATCGACCTTGACTTCCTTTGTCACACATACAATGAACACGCGTATTTTAGCT

mRNA sequence

GAAAGGTTGTTTGATGTTAGTGGCCGAACAAGATGAACCAGTAAGCTGTAGCGAAAATTTTGGATGCTCGCTTCACTGGAGCTGCGTTTTGTTCCATCAATCCCAGAAAGAAAAGGAGTGCTACTTCGATTTCGTCTTGCTTTGCTCTTCAGTTTTAATCTTGAATGGACGTTGCTCACTGTACTCTAGACGGCAATGCCGACGCAGTGGAATTTTGCCCGCACAGTTCATTTAGTAATGTTCTTGCGGCTTCCACTTATACACTACTAGAGGGTGATCGGCCCAGTCGATCTGGATGCCTATCAATCTTCAATGTCAATGCGGATGATTGCTCTTTGGAGCTGCTTCATCGCGTGGACACGGCTGGAATCTTTGATATAAAGTGGAGCCCTGTTGGTCAAACCATTAGTCCTCTGCTTGCTCAAGCGGATGCTGATGGTTGTATCAGAGTTCATGCCCTTGAGCACTCTTCAAATGGTGCAGAAGGACAATATTTAAAAGAGAGATGTGGCAGCAAAATCTCTTCCTCTATGTGTCTTTGCTTGGACTGGAACCCTTCGGCCACGTCCATCTCTGTGGGGCATTCAGATGGTTCCATCTCATTACTCTCTGCAGGAGAGTCCCGTTTGGAAGTCCAAAACCAATGGAAAGCTCACGAATTTGAGCTCTGGGCAACATCTTTTGACCCTCACCAACCTCATTTAGTGTACACTGGCTCAGATGACTGCAAATTCAGCTGTTGGGATTTGCGAGACACTCCCACCAAAGCATTTCACAACACTAAAGCTCACAAAATGGGTGTTTGTTGCATCGCCAAATGCCTCAATGACCCTTACAAACTGCTCACTGGCAGCTACGACGAGCACCTGAGAGTGTGGGACATAAGATCAATCTCAAAGCCCACAAATGAAACTTCAATTTGCTTGGGCGGCGGCGTTTGGAGAATCAAGCCCCACCCTTCAGTTTTTGACGTTGTTCTGGCGGCTTGTATGCACAATGGATTTGCAATTGTTAGAGTCAAAGACGATACTGCAGAAGTGGTTGAAACTTATGACAAGCACAGCTCTCTTGCTTACGGAGCTGACTGGCAAAGAGGAGATTCGTCTCATGAAGACGAAAGGAAAAGGTACACTGTTGCAACTTGTTCGTTTTATGATCGGCTTCTCCGGATATGGATTCCAGAAACTGACATATGAGTTCACTCATGTTACTTGATGATGCTTTATGGCACGTGTTTAATTCTTACGGGACTCTATGTTGGTTTCCTTGATAGTTAAATCTTATTGTGATCAATATTGAAGAATTCTTCCAATAATTTCGTGAGTACTTTTAATATGTTTACGAGCGATTTTATATCGTACATGTTTCTGGTGTAGAAGTTGACATTGTTCTTTTCCCTTTTATGGAGATTTTAGTAAGGATGGAGAATGAGTTCAAGCTCGAAATGAAATTGAATCGACCTTGACTTCCTTTGTCACACATACAATGAACACGCGTATTTTAGCT

Coding sequence (CDS)

ATGGACGTTGCTCACTGTACTCTAGACGGCAATGCCGACGCAGTGGAATTTTGCCCGCACAGTTCATTTAGTAATGTTCTTGCGGCTTCCACTTATACACTACTAGAGGGTGATCGGCCCAGTCGATCTGGATGCCTATCAATCTTCAATGTCAATGCGGATGATTGCTCTTTGGAGCTGCTTCATCGCGTGGACACGGCTGGAATCTTTGATATAAAGTGGAGCCCTGTTGGTCAAACCATTAGTCCTCTGCTTGCTCAAGCGGATGCTGATGGTTGTATCAGAGTTCATGCCCTTGAGCACTCTTCAAATGGTGCAGAAGGACAATATTTAAAAGAGAGATGTGGCAGCAAAATCTCTTCCTCTATGTGTCTTTGCTTGGACTGGAACCCTTCGGCCACGTCCATCTCTGTGGGGCATTCAGATGGTTCCATCTCATTACTCTCTGCAGGAGAGTCCCGTTTGGAAGTCCAAAACCAATGGAAAGCTCACGAATTTGAGCTCTGGGCAACATCTTTTGACCCTCACCAACCTCATTTAGTGTACACTGGCTCAGATGACTGCAAATTCAGCTGTTGGGATTTGCGAGACACTCCCACCAAAGCATTTCACAACACTAAAGCTCACAAAATGGGTGTTTGTTGCATCGCCAAATGCCTCAATGACCCTTACAAACTGCTCACTGGCAGCTACGACGAGCACCTGAGAGTGTGGGACATAAGATCAATCTCAAAGCCCACAAATGAAACTTCAATTTGCTTGGGCGGCGGCGTTTGGAGAATCAAGCCCCACCCTTCAGTTTTTGACGTTGTTCTGGCGGCTTGTATGCACAATGGATTTGCAATTGTTAGAGTCAAAGACGATACTGCAGAAGTGGTTGAAACTTATGACAAGCACAGCTCTCTTGCTTACGGAGCTGACTGGCAAAGAGGAGATTCGTCTCATGAAGACGAAAGGAAAAGGTACACTGTTGCAACTTGTTCGTTTTATGATCGGCTTCTCCGGATATGGATTCCAGAAACTGACATATGA

Protein sequence

MDVAHCTLDGNADAVEFCPHSSFSNVLAASTYTLLEGDRPSRSGCLSIFNVNADDCSLELLHRVDTAGIFDIKWSPVGQTISPLLAQADADGCIRVHALEHSSNGAEGQYLKERCGSKISSSMCLCLDWNPSATSISVGHSDGSISLLSAGESRLEVQNQWKAHEFELWATSFDPHQPHLVYTGSDDCKFSCWDLRDTPTKAFHNTKAHKMGVCCIAKCLNDPYKLLTGSYDEHLRVWDIRSISKPTNETSICLGGGVWRIKPHPSVFDVVLAACMHNGFAIVRVKDDTAEVVETYDKHSSLAYGADWQRGDSSHEDERKRYTVATCSFYDRLLRIWIPETDI

Homology

[Close]

BLAST of CmaCh11G000910 vs. ExPASy Swiss-Prot
Match: Q9CYU6 (Diphthine methyltransferase OS=Mus musculus OX=10090 GN=Dph7 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 5.9e-45
Identity = 115/325 (35.38%), Postives = 162/325 (49.85%), Query Frame = 0


Query: 12  ADAVEFCPHSSFSNVLAASTYTL--------LEGDRPS-RSGCLSIFNVNADDCSLELL- 71
           AD+VE+CP   + ++LA  TY L        L+G  P  R G L +F+ +  + +  LL 
Sbjct: 21  ADSVEWCPVEGYQHLLACGTYQLRAPRDQPALDGSEPQVRLGRLYLFSFSEHNTAKPLLE 80

Query: 72  -HRVDTAGIFDIKWSPVGQTISPLLAQADADGCIRVHALEHSSNGAEGQYLKERCGSKIS 131
             R D++ + D+KW  +  +   LL  A+A G I +  L    N +   Y  +   S   
Sbjct: 81  VQRRDSSAVLDMKWCHIPVSGHVLLGLANASGSIGLLRLMECENNS---YTLQPISSLAL 140

Query: 132 SSMCLCL--DWNPSAT--------SISVGHSDGSISLLSAGESRLEVQ--NQWKAHEFEL 191
              CL L  DW+   +         I    S G + LL   E   E+Q    W AH FE 
Sbjct: 141 DENCLSLSMDWSTGKSVRAREQPLKIISSDSKGQLHLLMVNEGTAELQLVASWPAHHFEA 200

Query: 192 WATSFDPHQPHLVYTGSDDCKFSCWDLRDTPTKAFHNTKAHKMGVCCIAKCLNDPYKLLT 251
           W  +F+  Q  LVY+G DDC    WD R   T  F  +K H MGVC I    +  + L T
Sbjct: 201 WIAAFNYWQTELVYSGGDDCLLRGWDTRMLGTPVF-TSKRHCMGVCSIQSSPHQEHILAT 260

Query: 252 GSYDEHLRVWDIRSISKPTNETSICLGGGVWRIKPHPSVFDVVLAACMHNGFAIVRVKDD 309
           GSYDEH+ +WD R+I +P  +  +   GGVWR+K HP    ++LAACMHNGF I+  +  
Sbjct: 261 GSYDEHVLLWDTRNIRQPLADVPV--QGGVWRLKWHPVHHHLLLAACMHNGFKILNCQKA 320

[Close]

BLAST of CmaCh11G000910 vs. ExPASy Swiss-Prot
Match: Q9BTV6 (Diphthine methyltransferase OS=Homo sapiens OX=9606 GN=DPH7 PE=1 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 1.7e-44
Identity = 117/332 (35.24%), Postives = 163/332 (49.10%), Query Frame = 0


Query: 12  ADAVEFCPHSSFSNVLAASTYTLLE-GDRPS---------------RSGCLSIFNVNADD 71
           AD+VE+CP     ++LA  TY L    DRP+               R G L +++ N ++
Sbjct: 16  ADSVEWCPLQGCRHLLACGTYQLRRPEDRPAGPQNKGGMEVKEPQVRLGRLFLYSFNDNN 75

Query: 72  C--SLELLHRVDTAGIFDIKWSPVGQTISPLLAQADADGCIRVHALEHSSNGAEGQYLKE 131
               L  + R DT+ I D+KW  +      LL  ADA G I++  L  S    E  ++ E
Sbjct: 76  SIHPLVEVQRKDTSAILDMKWCHIPVAGHALLGLADASGSIQLLRLVES----EKSHVLE 135

Query: 132 RCGSKISSSMCLC--LDWNPSAT--------SISVGHSDGSISLLSAGESRLEVQN--QW 191
              S      CL   LDW+   T         I    S G + LL   E+R  +Q    W
Sbjct: 136 PLSSLALEEQCLALSLDWSTGKTGRAGDQPLKIISSDSTGQLHLLMVNETRPRLQKVASW 195

Query: 192 KAHEFELWATSFDPHQPHLVYTGSDDCKFSCWDLRDTPTKAFHNTKAHKMGVCCIAKCLN 251
           +AH+FE W  +F+   P +VY+G DD     WD R  P K    +K H MGVC I    +
Sbjct: 196 QAHQFEAWIAAFNYWHPEIVYSGGDDGLLRGWDTR-VPGKFLFTSKRHTMGVCSIQSSPH 255

Query: 252 DPYKLLTGSYDEHLRVWDIRSISKPTNETSICLGGGVWRIKPHPSVFDVVLAACMHNGFA 309
             + L TGSYDEH+ +WD R++ +P  +T +   GGVWRIK HP    ++LAACMH+GF 
Sbjct: 256 REHILATGSYDEHILLWDTRNMKQPLADTPV--QGGVWRIKWHPFHHHLLLAACMHSGFK 315

[Close]

BLAST of CmaCh11G000910 vs. ExPASy Swiss-Prot
Match: Q55C80 (Diphthine methyltransferase homolog OS=Dictyostelium discoideum OX=44689 GN=wdr85 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.0e-44
Identity = 117/372 (31.45%), Postives = 181/372 (48.66%), Query Frame = 0


Query: 8   LDGNADAVEFCPHSSFSNVLAASTYTLLEGD---RPSRSGCLSIF------------NVN 67
           LD  +D+VEF P +  +N+    TY + +GD   +  R G L +F            N N
Sbjct: 11  LDYTSDSVEFYPFN--NNIFVCGTYEIEKGDTEYKERRKGKLYLFEIEEEQQQKENDNNN 70

Query: 68  ADDCSLELLHRVD----TAGIFDIKWSPVGQTISPLLAQADADGCIRVHALEHSSNGAEG 127
            ++ + +L   +      +GI D+KW+        +L    + G + ++  +      E 
Sbjct: 71  ENNNNNKLFKEIQNINFNSGILDMKWN---NNKDRILGVVMSKGELNIYQYDEVEKKLE- 130

Query: 128 QYLKERCGSKISSS-MCLCLDWNPSATSISVGHSDGSISLLSAGE--SRLEVQNQWKAHE 187
             LK      +S+  + L LDWN S   +    SDG+I L    +  S++  + +WKAH+
Sbjct: 131 --LKSSTEISLSNDILSLSLDWNKSGDKLICSFSDGNIGLFKVTKDYSKVTEEKRWKAHD 190

Query: 188 FELWATSFDPHQPHLVYTGSDDCKFSCWDLRD-----------TPTKAFHNTKAHKMGVC 247
           +E W  +F+ H   +V++G DDCKF  WDL              PT  F  TK   MGV 
Sbjct: 191 YEAWICAFNYHDESIVFSGGDDCKFKIWDLNQLLNHNDDDIGIPPTPKF--TKRCDMGVT 250

Query: 248 CIAKCLNDPYKLLTGSYDEHLRVWDIRSISKPTNETSICLGGGVWRIKPHPSVFDVVLAA 307
            I         +  GSYDE LR+WD++S+ +P   T   LGGG+WRIK HP   + ++ A
Sbjct: 251 SIHCHPTIENLIAVGSYDECLRIWDLKSLKQPIITTD-SLGGGIWRIKWHPFQKNKLVTA 310

Query: 308 CMHNGFAIVRVKDD------TAEVVETYD-KHSSLAYGADWQRGDSSHEDERKRYTVATC 340
           CM  GF I+    +      T ++ ++Y+  H S+AYG DW    S +++   +  +  C
Sbjct: 311 CMGGGFHILSTDPENINDFSTLQIEQSYNGPHKSIAYGVDW----SFNKNNFDKQFIGCC 367

[Close]

BLAST of CmaCh11G000910 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 2.3e-09
Identity = 44/166 (26.51%), Postives = 76/166 (45.78%), Query Frame = 0


Query: 84  LLAQADADGCIRVHALEHSSNGAEGQYLKERCGSKISSSMCLCLDWNP-SATSISVGHSD 143
           L A A    CI+V   + SS   E   ++       + S   CL WN      I+    +
Sbjct: 385 LFATAGVSRCIKV--FDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYE 444

Query: 144 GSISL--LSAGESRLEVQNQWKAHEFELWATSFDPHQPHLVYTGSDDCKFSCWDLRDTPT 203
           G +++  ++  +S +E    ++ HE   W+  F   +P ++ +GSDDCK   W  R   +
Sbjct: 445 GIVTVWDVTTRQSLME----YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEAS 504

Query: 204 KAFHNTKAHKMGVCCIAKCLNDPYKLLTGSYDEHLRVWDIRSISKP 247
               + KA+   +CC+         +  GS D H+  +D+R+IS+P
Sbjct: 505 VINIDMKAN---ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQP 541

[Close]

BLAST of CmaCh11G000910 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.9e-09
Identity = 34/126 (26.98%), Postives = 61/126 (48.41%), Query Frame = 0


Query: 126 CLDWNPSA-TSISVGHSDGSISL--LSAGESRLEVQNQWKAHEFELWATSFDPHQPHLVY 185
           CL WN  A   I+    +G +++  ++  +S +E    ++ HE   W+  F    P ++ 
Sbjct: 422 CLSWNKYAKNQIASSDYEGIVTVWTMTTRKSLME----YEEHEKRAWSVDFSRTDPSMLV 481

Query: 186 TGSDDCKFSCWDLRDTPTKAFHNTKAHKMGVCCIAKCLNDPYKLLTGSYDEHLRVWDIRS 245
           +GSDDCK   W      +    + KA+   +CC+         +  GS D H+  +D+R+
Sbjct: 482 SGSDDCKVKVWCTNQEASVLNIDMKAN---ICCVKYNPGSGNYIAVGSADHHIHYYDLRN 540

Query: 246 ISKPTN 249
           IS+P +
Sbjct: 542 ISRPVH 540

[Close]

BLAST of CmaCh11G000910 vs. TAIR 10
Match: AT5G63010.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 448.0 bits (1151), Expect = 7.0e-126
Identity = 209/345 (60.58%), Postives = 261/345 (75.65%), Query Frame = 0


Query: 1   MDVAHCTLDGNADAVEFCPHSSFSNVLAASTYTLLEGDRPSRSGCLSIFNV-NADDCSLE 60
           MD A C L+GNADAVEFCPH S++N+LAASTYTL EGD PSRSG + +F+V + +D  L 
Sbjct: 1   MDAADCYLEGNADAVEFCPHESYANLLAASTYTLQEGDCPSRSGSVYLFDVGDVEDVGLN 60

Query: 61  LLHRVDTAGIFDIKWSPVGQTISPLLAQADADGCIRVHALEHSSNGAEGQYLKERCGSKI 120
           L+ ++DTAG+FDI+WS  G      LAQADADGC+ V+ ++ + +      L+E  G +I
Sbjct: 61  LIQKIDTAGVFDIRWSRGGDGGDVALAQADADGCLIVYKIDETESKGT---LREVSGKRI 120

Query: 121 SSSMCLCLDWNPSATSISVGHSDGSISLLSAGESRLEVQNQWKAHEFELWATSFDPHQPH 180
           SSSMCLCLDW+PS+TSI VG SDGS S++S  +S LE   +WK H+FELW  SFD + P+
Sbjct: 121 SSSMCLCLDWDPSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPN 180

Query: 181 LVYTGSDDCKFSCWDLRDTP--TKAFHNTKAHKMGVCCIAKCLNDPYKLLTGSYDEHLRV 240
           LVYTGSDDCKFSCWD+RD+P   + F N+K H MGVCCI+   +DPY + TGSYDE LRV
Sbjct: 181 LVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRV 240

Query: 241 WDIRSISKPTNETSICLGGGVWRIKPHPSVFDVVLAACMHNGFAIVRVKDDTAEVVETYD 300
           WD RS+S+P NETS+ LGGGVWRIK HPS+  VVLAACMHNGFA+ +V D   EV+E+Y+
Sbjct: 241 WDTRSVSRPLNETSVSLGGGVWRIKHHPSLSGVVLAACMHNGFALAKVSDGKGEVLESYN 300

Query: 301 KHSSLAYGADWQRGDSSHEDERKRYTVATCSFYDRLLRIWIPETD 343
           KH SLAYGADW RG      ++K+  VATCSFYDRLLR+W+P TD
Sbjct: 301 KHHSLAYGADWYRG-----KDQKQSVVATCSFYDRLLRVWMPITD 337

[Close]

BLAST of CmaCh11G000910 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-10
Identity = 44/166 (26.51%), Postives = 76/166 (45.78%), Query Frame = 0


Query: 84  LLAQADADGCIRVHALEHSSNGAEGQYLKERCGSKISSSMCLCLDWNP-SATSISVGHSD 143
           L A A    CI+V   + SS   E   ++       + S   CL WN      I+    +
Sbjct: 385 LFATAGVSRCIKV--FDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYE 444

Query: 144 GSISL--LSAGESRLEVQNQWKAHEFELWATSFDPHQPHLVYTGSDDCKFSCWDLRDTPT 203
           G +++  ++  +S +E    ++ HE   W+  F   +P ++ +GSDDCK   W  R   +
Sbjct: 445 GIVTVWDVTTRQSLME----YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEAS 504

Query: 204 KAFHNTKAHKMGVCCIAKCLNDPYKLLTGSYDEHLRVWDIRSISKP 247
               + KA+   +CC+         +  GS D H+  +D+R+IS+P
Sbjct: 505 VINIDMKAN---ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQP 541

[Close]

BLAST of CmaCh11G000910 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 24/94 (25.53%), Postives = 42/94 (44.68%), Query Frame = 0


Query: 153 SRLEVQNQWKAHEFELWATSFDPHQPHLVYTGSDDCKFSCWDLRDTPTKAFHNTKAHKMG 212
           +R ++  + K HE  +W+  +    P L+ +GSDD     W +    +     TKA+   
Sbjct: 564 ARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN--- 623

Query: 213 VCCIAKCLNDPYKLLTGSYDEHLRVWDIRSISKP 247
           +CC+         L  GS D  +  +D+R+   P
Sbjct: 624 ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLP 654

[Close]

BLAST of CmaCh11G000910 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 )

HSP 1 Score: 47.8 bits (112), Expect = 2.1e-05
Identity = 24/94 (25.53%), Postives = 42/94 (44.68%), Query Frame = 0


Query: 153 SRLEVQNQWKAHEFELWATSFDPHQPHLVYTGSDDCKFSCWDLRDTPTKAFHNTKAHKMG 212
           +R ++  + K HE  +W+  +    P L+ +GSDD     W +    +     TKA+   
Sbjct: 564 ARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN--- 623

Query: 213 VCCIAKCLNDPYKLLTGSYDEHLRVWDIRSISKP 247
           +CC+         L  GS D  +  +D+R+   P
Sbjct: 624 ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLP 654

[Close]

BLAST of CmaCh11G000910 vs. TAIR 10
Match: AT2G19520.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 46.6 bits (109), Expect = 4.7e-05
Identity = 30/119 (25.21%), Postives = 49/119 (41.18%), Query Frame = 0


Query: 137 SVGHSDGSISLLSAGESRLEVQNQWKAHEFELWATSFDPHQPHLVYTGSDDCKFSCWDLR 196
           SVG  D  + L  A      V    KAH+ +L    ++PH  +L+ TGS D     +D R
Sbjct: 310 SVG-DDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRR 369

Query: 197 DTPTKA----FHNTKAHKMGVCCIAKCLNDPYKLLTGSYDEHLRVWDIRSISKPTNETS 252
                      +  + HK  V C+    +      + + D  L +WD   +SK ++  +
Sbjct: 370 KLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAA 427

The following BLAST results are available for this feature:

BLAST of CmaCh11G000910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CYU6	5.9e-45	35.38	Diphthine methyltransferase OS=Mus musculus OX=10090 GN=Dph7 PE=2 SV=1	[more]
Q9BTV6	1.7e-44	35.24	Diphthine methyltransferase OS=Homo sapiens OX=9606 GN=DPH7 PE=1 SV=2	[more]
Q55C80	5.0e-44	31.45	Diphthine methyltransferase homolog OS=Dictyostelium discoideum OX=44689 GN=wdr8...	[more]
P43254	2.3e-09	26.51	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
P93471	8.9e-09	26.98	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]

BLAST of CmaCh11G000910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63010.1	7.0e-126	60.58	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G32950.1	1.7e-10	26.51	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G53090.1	2.1e-05	25.53	SPA1-related 4	[more]
AT1G53090.2	2.1e-05	25.53	SPA1-related 4	[more]
AT2G19520.1	4.7e-05	25.21	Transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 199..239 e-value: 0.002 score: 27.4 coord: 57..98 e-value: 17.0 score: 9.2 coord: 112..149 e-value: 10.0 score: 10.6 coord: 289..338 e-value: 72.0 score: 5.3 coord: 154..194 e-value: 0.0066 score: 25.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 204..239 e-value: 0.0087 score: 16.9 coord: 160..194 e-value: 0.13 score: 13.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 226..248 score: 9.104886
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 5..337 e-value: 4.0E-32 score: 113.5
None	No IPR available	PANTHER	PTHR46042	DIPHTHINE METHYLTRANSFERASE	coord: 2..342
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 226..240
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 12..337

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G000910.1	CmaCh11G000910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0005515	protein binding