CmaCh11G000760 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G000760
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	VARLMGL domain-containing protein
Location	Cma_Chr11: 370885 .. 371685 (-)
RNA-Seq Expression	CmaCh11G000760
Synteny	CmaCh11G000760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGCTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTCAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGATCCCTTCCCTGCCTCGCCCAACATGCCCTGCACACAAAACCAGCCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTAAACTCTGCAACTACGATGAGATGCGAGGCAGGATGTCCTGCGTAAACAACTCGGATATCTTACGCTCTGCACAGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATAGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAGACAGCCTTGCGGTTGCCATCGACAATCGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCGATGCCGACACCGGTGAATGCTGAATGTGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

mRNA sequence

ATGAAGGAGCTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTCAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGATCCCTTCCCTGCCTCGCCCAACATGCCCTGCACACAAAACCAGCCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTAAACTCTGCAACTACGATGAGATGCGAGGCAGGATGTCCTGCGTAAACAACTCGGATATCTTACGCTCTGCACAGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATAGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAGACAGCCTTGCGGTTGCCATCGACAATCGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCGATGCCGACACCGGTGAATGCTGAATGTGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

Coding sequence (CDS)

ATGAAGGAGCTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTCAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGATCCCTTCCCTGCCTCGCCCAACATGCCCTGCACACAAAACCAGCCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTAAACTCTGCAACTACGATGAGATGCGAGGCAGGATGTCCTGCGTAAACAACTCGGATATCTTACGCTCTGCACAGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATAGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAGACAGCCTTGCGGTTGCCATCGACAATCGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCGATGCCGACACCGGTGAATGCTGAATGTGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

Protein sequence

MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPASPNMPCTQNQPTLEEMILQLELEEETARRTKLCNYDEMRGRMSCVNNSDILRSAQNALNQYPRFSLDGKDAMYRSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLSSCSSNNGRYIVKPIATESAAWKARHFL

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh11G000760 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh11G000760 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032795	DUF3741-associated sequence motif	PFAM	PF14383	VARLMGL	coord: 167..188 e-value: 1.9E-7 score: 30.4
None	No IPR available	PANTHER	PTHR37897	DNAK FAMILY PROTEIN	coord: 1..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G000760.1	CmaCh11G000760.1	mRNA