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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. CTAAAACCCTGGAATCATTCTGGCTTCAATAAAGAAGAAAGCCCATTCTACGAAGAAGGTTTCTCTGCTCTCATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGCCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGACGAGTTCGTGCCATTGCTGAGATTGTCAATTCCATGGTCGACCTTTCACGAAAAGGGCAAAACGTCGATCTGAACGCTCTGAAATCCGCTGCCTGCCGGAAATATGGCCTTGCACGGGCCCCAAAGCTTGTCGAGATGATTGCGGCGCTTCCCGAGTCGGACCGCGAGGCACTGCTGCCGAAGCTTCGAGCCAAGCCGGTTCGAACAGCCTCCGGTATCGCAGTCGTGGCGGTGATGTCTAAACCGCATCGGTGCCCTCATATTGCTACGACGGGGAATATTTGTGTATACTGCCCCGGAGGACCTGATTCGGACTTTGAGTACAGTACTCAATCTTACACTGGTTATGAGCCCACAAGCATGCGTGCAATTCGTGCAAGGTTGGTTGTAACTTGTAACTTCTCAAGTCTCGAACTTTTTGCTTCACGAGTATTTGTTCCATCTTTATTATTATGTTATTGGATGCCTTGCACATCTATGTCGAGGAAAGAGCGTGTTTAGAACACAGTATTTTGGCTAAGAAAGTATTAAATTTCTAAATTCATGGATAAAATATTTTTAGCCCAGAGTAAACCGAGGTGGGGTTCTTTGAAACTACTACGGGAGTGAAGAAAATGAATGCGAGTAACTGGCATCTGCTTGTCGTGGAAAATTAACTATAAGAAGCATGCTTTCCTTGGCCCAGTCTGTTTGCTTCACTAGATATATGAATATCTTTAGGGTGTACTACAATCATTGTTGCTTTTGCTTGTCAGTTCTTAATGATATTGAGTTGCTTTGCATACGTTCTGAGATCATTTTCATCTTACCTGCCACCGCTTTGATTGTAGATACAACCCATATGTCCAGGCTAGAAGTCGGATAGATCAACTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTCCTTTTTCTTCTCTCCAAATTTTTTTTTCTATCATAGTAAAATATCATAAAATTGTCTGTTTACTTTCAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACATCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGTGAGTTTTCCCCCCAAACTTTCAAGTTTTGAGCTTTACATTTCCTCGTCTCTGTATTATACCAGTTCAAACTGTTTCAAACTTTTATCTTTGTGAATTATTCATTGGATACGTTATTACTGCAATTAAGATCACGTACGACCACTCCTTGCCGTGGTCTATTATAAGCTCCTGAGACTGTGTTTTTGTTTAATTAGTAAAAAAAAGATTTCATTGCTTATCTGTTTTTGCTTAACCAGGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATCGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGTTTGTAGTAGCAAATTTGCAAAGAATAAAGCTAACTCATTGATAAACCATTTGCAAGGCAACCTTAGATCTGTGGCCAGTTAAGGATTTAAATTTATTGTTCATGTGACTTGATCTTCTCTTAGTAGGTTTTCTCCCCATTTGGCATTCCTTGAAGTTTGGGTAGCATCATCATCATGTTGCATTGTTAACAATGCATCTTTTTACATTTTTCTGAAGTTTGAAATTAACTTTTTGCTTTTCTTGTAGGTTGTAGCACACATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGGGACCTGGAAAGTTTTCGGGAGTTCTTTGAGAACCCTTCATTTAGAGCAGATGGGCTCAAAATATATCCCACGCTTGTGATCCGTGGAACTGGGCTCTATGAACTATGGAAAACTGGCAGGCAAGTAGCTATTTGTACAATCTCACTATGGAACATTGTTATTTTCTCAAACTTGAAAAGAGATGTTCGAATCATGACCCTTGTTTTATAAATTAAATGATCATGTTCCCAATTGAAATATTTTTGTGTGAAAATAGTAATGGTGATAACTATTGCAGATCATCATAAATGTTCATGCATATGCAGGTATAGAAACTATCCACCAGAGCAACTTGTTGATATTGTGGCGAGAATCCTAGCTCTGGTACCTCCCTGGACTCGAGTATATAGAGTACAACGGGATATCCCAATGCCTCTGGTTACTTCTGGTGTAGAGAAAGGAAATCTTCGAGAGTTAGCTCTAGCTCGAATGGATGATTTGGGCTTGAAATGCCGTGATGTTCGGACTCGAGAAGCTGGAATTCAGGTTAATTAACAAATGGAGCTTTATGTTCTTTAGTCACACTTCTTATATTCCCAATTTAAACCTAGTACTCTGCCTTAGTGAAGGATGTTAAAAGCCTTCCCATTTTGTGACTTCAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCCAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGTATCTTATCCCCATACCCCATGTCCTCAGTTTTTTCATGCAATTACAAATTCAAGGCTAATGCTGTGTTACAATTGTGATGCATGGCCATAGCTTGCATGTTGTAGGCTCGTATTACTAGAACTTGAATTTTTATGCAGGACATTCTTGTTGGTCTGCTCCGGCTGAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCCGTTCCGGTTCATGGACGTGATACTGAGAAGCTACAACACCAGGTAATACAGCCCCCTCTTTTCTACAAGCTGCATTAAAGAGGAAAGAAAATCCTTTTCTATGCAAAAGAATTAAGAGTATTACTGGATCTTTAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGCTCGAATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACACGTCATTATTATAGAAAATTAGGCTATGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGACTGATGAGATTGAATCAATTTTGTTATGATGGTATCACTTAAATGCTATGTTGTATGCTTCTTTTCCTTTTATTGCCCTCAAAGTTGATCCTTTCGTTTTTGGTAATTGATTATTTTTCTTACTTCTATACTTGGTTTGAAATATATCTCATTCGTCCCTTGGTTATGTATAATGGATAAATTTCTTCC mRNA sequence CTAAAACCCTGGAATCATTCTGGCTTCAATAAAGAAGAAAGCCCATTCTACGAAGAAGGTTTCTCTGCTCTCATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGCCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGACGAGTTCGTGCCATTGCTGAGATTGTCAATTCCATGGTCGACCTTTCACGAAAAGGGCAAAACGTCGATCTGAACGCTCTGAAATCCGCTGCCTGCCGGAAATATGGCCTTGCACGGGCCCCAAAGCTTGTCGAGATGATTGCGGCGCTTCCCGAGTCGGACCGCGAGGCACTGCTGCCGAAGCTTCGAGCCAAGCCGGTTCGAACAGCCTCCGGTATCGCAGTCGTGGCGGTGATGTCTAAACCGCATCGGTGCCCTCATATTGCTACGACGGGGAATATTTGTGTATACTGCCCCGGAGGACCTGATTCGGACTTTGAGTACAGTACTCAATCTTACACTGGTTATGAGCCCACAAGCATGCGTGCAATTCGTGCAAGATACAACCCATATGTCCAGGCTAGAAGTCGGATAGATCAACTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACATCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATCGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGTTGTAGCACACATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGGGACCTGGAAAGTTTTCGGGAGTTCTTTGAGAACCCTTCATTTAGAGCAGATGGGCTCAAAATATATCCCACGCTTGTGATCCGTGGAACTGGGCTCTATGAACTATGGAAAACTGGCAGGTATAGAAACTATCCACCAGAGCAACTTGTTGATATTGTGGCGAGAATCCTAGCTCTGGTACCTCCCTGGACTCGAGTATATAGAGTACAACGGGATATCCCAATGCCTCTGGTTACTTCTGGTGTAGAGAAAGGAAATCTTCGAGAGTTAGCTCTAGCTCGAATGGATGATTTGGGCTTGAAATGCCGTGATGTTCGGACTCGAGAAGCTGGAATTCAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCCAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGACATTCTTGTTGGTCTGCTCCGGCTGAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCCGTTCCGGTTCATGGACGTGATACTGAGAAGCTACAACACCAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGCTCGAATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACACGTCATTATTATAGAAAATTAGGCTATGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGACTGATGAGATTGAATCAATTTTGTTATGATGGTATCACTTAAATGCTATGTTGTATGCTTCTTTTCCTTTTATTGCCCTCAAAGTTGATCCTTTCGTTTTTGGTAATTGATTATTTTTCTTACTTCTATACTTGGTTTGAAATATATCTCATTCGTCCCTTGGTTATGTATAATGGATAAATTTCTTCC Coding sequence (CDS) ATGGCGACTGCAGTGGTGGCGGAATCGGCTCGGAAACTACCTCGGCCTGGCCGGGGGGGATTCGAAGGTCATGGGTTTTCCGAGGAGGAAGGACGAGTTCGTGCCATTGCTGAGATTGTCAATTCCATGGTCGACCTTTCACGAAAAGGGCAAAACGTCGATCTGAACGCTCTGAAATCCGCTGCCTGCCGGAAATATGGCCTTGCACGGGCCCCAAAGCTTGTCGAGATGATTGCGGCGCTTCCCGAGTCGGACCGCGAGGCACTGCTGCCGAAGCTTCGAGCCAAGCCGGTTCGAACAGCCTCCGGTATCGCAGTCGTGGCGGTGATGTCTAAACCGCATCGGTGCCCTCATATTGCTACGACGGGGAATATTTGTGTATACTGCCCCGGAGGACCTGATTCGGACTTTGAGTACAGTACTCAATCTTACACTGGTTATGAGCCCACAAGCATGCGTGCAATTCGTGCAAGATACAACCCATATGTCCAGGCTAGAAGTCGGATAGATCAACTGAAGCGTTTGGGCCATAGTGTTGATAAGGTTGAGTTCATCTTAATGGGTGGGACTTTCATGTCACTGCCAGCTGATTATCGTGATTACTTTATAAGGAATCTTCATGATGCTTTGTCAGGGCATACATCTGCCAATGTTGAAGAGGCAGTTGCCTACTCTGAGCACAGTGCAGTTAAATGTATTGGCATGACAATAGAAACGAGGCCTGATTATTGTCTTGGACCTCACTTGAGGCAAATGCTTTCTTATGGTTGTACACGCCTGGAGATCGGAGTTCAAAGTACATATGAGGATGTAGCTCGAGACACTAACAGAGGGCATACTGTAGCTGCTGTGGCTGATTGCTTTTGCTTGGCAAAGGATGCTGGTTTCAAGGTTGTAGCACACATGATGCCTGATCTTCCTAATGTTGGGGTTGAGAGGGACCTGGAAAGTTTTCGGGAGTTCTTTGAGAACCCTTCATTTAGAGCAGATGGGCTCAAAATATATCCCACGCTTGTGATCCGTGGAACTGGGCTCTATGAACTATGGAAAACTGGCAGGTATAGAAACTATCCACCAGAGCAACTTGTTGATATTGTGGCGAGAATCCTAGCTCTGGTACCTCCCTGGACTCGAGTATATAGAGTACAACGGGATATCCCAATGCCTCTGGTTACTTCTGGTGTAGAGAAAGGAAATCTTCGAGAGTTAGCTCTAGCTCGAATGGATGATTTGGGCTTGAAATGCCGTGATGTTCGGACTCGAGAAGCTGGAATTCAGGACATTCATCACAAGATTAAACCTGAAGAAGTTGAGCTTGTCCGTCGTGATTATATGGCCAATGAAGGCTGGGAAACGTTTCTATCATATGAAGATGTTCGGCAGGACATTCTTGTTGGTCTGCTCCGGCTGAGAAGATGTGGTCGCAACACCACTTGTCCTGAGCTGGTTGGGAAGTGTTCCATTGTTCGTGAACTCCATGTGTATGGAACTGCCGTTCCGGTTCATGGACGTGATACTGAGAAGCTACAACACCAGGGTTATGGCACGCTTTTGATGGAGGAGGCAGAGCGGATAGCTCGAATGGAGCATCGATCAACAAAGATTGCTGTTATATCAGGCGTTGGAACACGTCATTATTATAGAAAATTAGGCTATGAACTAGAGGGACCTTACATGGTGAAAAGCCTGGACTGA Protein sequence MATAVVAESARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARMEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSLD
Homology
BLAST of CmaCh11G000540 vs. ExPASy Swiss-Prot
Match: Q93ZR1 (Elongator complex protein 3 OS=Arabidopsis thaliana OX=3702 GN=HAG3 PE=1 SV=1) HSP 1 Score: 1062.4 bits (2746), Expect = 1.8e-309 Identity = 512/564 (90.78%), Postives = 541/564 (95.92%), Query Frame = 0
Query: 1 MATAVVAE-SARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALK 60
MATAVV +K PRPG+GG++G G +EEE RVRAI+EIV++M++ S + +NVDLNA+K
Sbjct: 1 MATAVVMNGELKKQPRPGKGGYQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK 60
Query: 61 SAACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120
+AACRKYGLARAPKLVEMIAALP+S+RE LLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
Sbjct: 61 TAACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120
Query: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180
ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
Sbjct: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180
Query: 181 DKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIET 240
DKVEFILMGGTFMSLPA+YRD+FIRNLHDALSGHTSANVEEAVAYSEHSA KCIGMTIET
Sbjct: 181 DKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET 240
Query: 241 RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300
RPDYCLGPHLRQML YGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
Sbjct: 241 RPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300
Query: 301 AHMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP 360
AHMMPDLPNVGVERD+ESF+EFFE+PSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP
Sbjct: 301 AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP 360
Query: 361 EQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR 420
EQLVDIVARIL++VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR
Sbjct: 361 EQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR 420
Query: 421 TREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTC 480
TREAGIQDIHHKIKPE+VELVRRDY ANEGWETFLSYED RQDILVGLLRLR+CG+N TC
Sbjct: 421 TREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGKNVTC 480
Query: 481 PELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARMEHRSTKIAVIS 540
PEL+GKCS+VRELHVYGTAVPVHGRD +KLQHQGYGTLLMEEAERIAR EHRS KI VIS
Sbjct: 481 PELMGKCSVVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSNKIGVIS 540
Query: 541 GVGTRHYYRKLGYELEGPYMVKSL 564
GVGTRHYYRKLGYELEGPYMVK L
Sbjct: 541 GVGTRHYYRKLGYELEGPYMVKHL 564
BLAST of CmaCh11G000540 vs. ExPASy Swiss-Prot
Match: Q7X7L3 (Elongator complex protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ELP3 PE=2 SV=2) HSP 1 Score: 1053.5 bits (2723), Expect = 8.4e-307 Identity = 517/572 (90.38%), Postives = 540/572 (94.41%), Query Frame = 0
Query: 1 MATAVVA--------ESARKLPRPGRGGFE-GHGFSEEEGRVRAIAEIVNSMVDLSRKGQ 60
MATAV A + R+ P PGRGG G SEEE RVRAIAEIV++M +LSR+G+
Sbjct: 1 MATAVAAAGGGGGGEQPRRRKPAPGRGGVVLPAGLSEEEARVRAIAEIVSAMGELSRRGE 60
Query: 61 NVDLNALKSAACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMS 120
+VDLNALKSAACR+YGLARAPKLVEMIAA+PE+DR ALLP+LRAKPVRTASGIAVVAVMS
Sbjct: 61 DVDLNALKSAACRRYGLARAPKLVEMIAAVPEADRAALLPRLRAKPVRTASGIAVVAVMS 120
Query: 121 KPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQ 180
KPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQ
Sbjct: 121 KPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQ 180
Query: 181 LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVK 240
LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAV YSEH AVK
Sbjct: 181 LKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVCYSEHGAVK 240
Query: 241 CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA 300
CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA
Sbjct: 241 CIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLA 300
Query: 301 KDAGFKVVAHMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKT 360
KDAGFKVVAHMMPDLPNVGVERDLESFREFFENP+FRADGLKIYPTLVIRGTGLYELWKT
Sbjct: 301 KDAGFKVVAHMMPDLPNVGVERDLESFREFFENPAFRADGLKIYPTLVIRGTGLYELWKT 360
Query: 361 GRYRNYPPEQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDL 420
GRYRNYPPE LVDIVARIL++VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARM+DL
Sbjct: 361 GRYRNYPPELLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDL 420
Query: 421 GLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLR 480
GLKCRDVRTREAGIQDIHHKI+P+EVELVRRDY ANEGWETFLSYED +QDIL+GLLRLR
Sbjct: 421 GLKCRDVRTREAGIQDIHHKIRPDEVELVRRDYAANEGWETFLSYEDTQQDILIGLLRLR 480
Query: 481 RCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARMEHR 540
+CGRN TCPELVG+CSIVRELHVYGTAVPVHGRD +KLQHQGYGTLLMEEAERIAR EHR
Sbjct: 481 KCGRNVTCPELVGRCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARKEHR 540
Query: 541 STKIAVISGVGTRHYYRKLGYELEGPYMVKSL 564
S KIAVISGVGTRHYYRKLGYELEGPYMVK L
Sbjct: 541 SKKIAVISGVGTRHYYRKLGYELEGPYMVKCL 572
BLAST of CmaCh11G000540 vs. ExPASy Swiss-Prot
Match: Q5ZHS1 (Elongator complex protein 3 OS=Gallus gallus OX=9031 GN=ELP3 PE=2 SV=1) HSP 1 Score: 852.0 bits (2200), Expect = 3.7e-246 Identity = 407/537 (75.79%), Postives = 462/537 (86.03%), Query Frame = 0
Query: 27 SEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLVEMIAALPESDR 86
S E + IA+I+ +++ +G++V+LN LK+ KYGL+ P+LV++IAA+P R
Sbjct: 9 SHAELMMMTIADIIKQLIEAHEQGKDVNLNKLKTKTSAKYGLSAQPRLVDIIAAVPPQHR 68
Query: 87 EALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTG 146
+AL+PKL+AKP+RTASGIAVVAVM KPHRCPHI TGNICVYCPGGPDSDFEYSTQSYTG
Sbjct: 69 KALVPKLKAKPIRTASGIAVVAVMCKPHRCPHINFTGNICVYCPGGPDSDFEYSTQSYTG 128
Query: 147 YEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNL 206
YEPTSMRAIRARY+PY+Q R R++QLK+LGHSVDKVEFI+MGGTFM+LP DYRDYFIRNL
Sbjct: 129 YEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPEDYRDYFIRNL 188
Query: 207 HDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQS 266
HDALSGHTS NV EAV YSE S KC+G+TIETRPDYCL HL MLSYGCTRLEIGVQS
Sbjct: 189 HDALSGHTSNNVAEAVKYSERSLTKCVGITIETRPDYCLKRHLSDMLSYGCTRLEIGVQS 248
Query: 267 TYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFENPS 326
YEDVARDTNRGHTV AV + F LAKDAGFKVVAHMMPDLPN+G+ERD + F EFFENP+
Sbjct: 249 VYEDVARDTNRGHTVKAVCESFHLAKDAGFKVVAHMMPDLPNMGLERDTDQFVEFFENPA 308
Query: 327 FRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILALVPPWTRVYRVQRDI 386
FR DG+K+YPTLVIRGTGLYELWKTGRY++YPP LVD+VARILALVPPWTRVYRVQRDI
Sbjct: 309 FRPDGMKLYPTLVIRGTGLYELWKTGRYKSYPPSTLVDLVARILALVPPWTRVYRVQRDI 368
Query: 387 PMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMA 446
PMPLV+SGVE GNLRELALARM DLG +CRDVRTRE GIQ+IHHK++P ++EL+RRDY+A
Sbjct: 369 PMPLVSSGVEHGNLRELALARMKDLGTQCRDVRTREVGIQEIHHKVRPYQIELIRRDYVA 428
Query: 447 NEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDT 506
N GWETFLSYED QDILVGLLRLR+C + PEL G SIVRELHVYG+ VPV RD
Sbjct: 429 NGGWETFLSYEDPEQDILVGLLRLRKCSEESFRPELKGGVSIVRELHVYGSVVPVSSRDP 488
Query: 507 EKLQHQGYGTLLMEEAERIARMEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL 564
K QHQG+G LLMEEAERIA+ EH S KIAVISGVGTR+YYRK+GYELEGPYMVK L
Sbjct: 489 SKFQHQGFGMLLMEEAERIAKEEHGSWKIAVISGVGTRNYYRKIGYELEGPYMVKRL 545
BLAST of CmaCh11G000540 vs. ExPASy Swiss-Prot
Match: Q9VQZ6 (Elongator complex protein 3 OS=Drosophila melanogaster OX=7227 GN=Elp3 PE=2 SV=1) HSP 1 Score: 849.0 bits (2192), Expect = 3.1e-245 Identity = 403/542 (74.35%), Postives = 465/542 (85.79%), Query Frame = 0
Query: 23 GHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLVEMIAALP 82
G G S +E +V I EI+ ++ ++V+LN +KS KYGL +P+LV++IAA+P
Sbjct: 8 GVGLSRQERQVLVIGEIIQELLKAHEAKKDVNLNRMKSLVASKYGLDSSPRLVDIIAAVP 67
Query: 83 ESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQ 142
+ ++ LLPKLRAKP+RTASGIAVVAVM KPHRCPHI TGNICVYCPGGPDSDFEYSTQ
Sbjct: 68 QDAKKILLPKLRAKPIRTASGIAVVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQ 127
Query: 143 SYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYF 202
SYTGYEPTSMRAIR+RY+P++Q R R++QLK+LGHSVDKVEFI+MGGTFM LP +YRDYF
Sbjct: 128 SYTGYEPTSMRAIRSRYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMCLPEEYRDYF 187
Query: 203 IRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEI 262
IRNLHDALSGH+SANV EAV YSE S KCIG+TIETRPDYCL H+ MLSYGCTRLEI
Sbjct: 188 IRNLHDALSGHSSANVAEAVRYSEKSRTKCIGITIETRPDYCLKRHISDMLSYGCTRLEI 247
Query: 263 GVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFF 322
GVQS YEDVARDTNRGHTV AV + F L KDAG+K+V HMMPDLPNV ERD+E F E+F
Sbjct: 248 GVQSVYEDVARDTNRGHTVRAVCESFQLGKDAGYKIVTHMMPDLPNVDFERDIEQFIEYF 307
Query: 323 ENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILALVPPWTRVYRV 382
ENP+FR+DGLKIYPTLVIRGTGLYELWKTGRY++YPP LVD+VA+ILALVPPWTRVYRV
Sbjct: 308 ENPAFRSDGLKIYPTLVIRGTGLYELWKTGRYKSYPPSMLVDLVAKILALVPPWTRVYRV 367
Query: 383 QRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRR 442
QRDIPMPLV+SGVE GNLRELALARM DLG CRDVRTRE GIQ+IH+K++P E+EL+RR
Sbjct: 368 QRDIPMPLVSSGVEHGNLRELALARMKDLGTTCRDVRTREVGIQEIHNKVRPYEIELIRR 427
Query: 443 DYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVH 502
DY+AN GWETFLSYED QDILVGLLRLR+C +T PEL G+CSIVRELHVYG+ VPV+
Sbjct: 428 DYVANGGWETFLSYEDPEQDILVGLLRLRKCSPDTFRPELKGECSIVRELHVYGSVVPVN 487
Query: 503 GRDTEKLQHQGYGTLLMEEAERIARMEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKS 562
RD K QHQG+G LLMEEAERIAR EH STK+AVISGVGTR+YYRK+GY+L+GPYM KS
Sbjct: 488 ARDPTKFQHQGFGMLLMEEAERIAREEHGSTKLAVISGVGTRNYYRKMGYQLDGPYMSKS 547
Query: 563 LD 565
++
Sbjct: 548 IE 549
BLAST of CmaCh11G000540 vs. ExPASy Swiss-Prot
Match: Q5RIC0 (Elongator complex protein 3 OS=Danio rerio OX=7955 GN=elp3 PE=2 SV=3) HSP 1 Score: 848.2 bits (2190), Expect = 5.4e-245 Identity = 404/537 (75.23%), Postives = 463/537 (86.22%), Query Frame = 0
Query: 27 SEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALKSAACRKYGLARAPKLVEMIAALPESDR 86
S E + IA+++ +V+ +G++++LN +K+ KYGL+ P+LV++IAA+P R
Sbjct: 11 SRAELMMMTIADVIKQLVEAHEEGKDINLNKVKTKTSAKYGLSAQPRLVDIIAAVPPHYR 70
Query: 87 EALLPKLRAKPVRTASGIAVVAVMSKPHRCPHIATTGNICVYCPGGPDSDFEYSTQSYTG 146
AL+PKL+AKP+RTASGIAVVAVM KPHRCPHI+ TGNICVYCPGGPDSDFEYSTQSYTG
Sbjct: 71 RALVPKLKAKPIRTASGIAVVAVMCKPHRCPHISFTGNICVYCPGGPDSDFEYSTQSYTG 130
Query: 147 YEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDKVEFILMGGTFMSLPADYRDYFIRNL 206
YEPTSMRAIRARY+PY+Q R R++QLK+LGHSVDKVEFI+MGGTFM+LP +YRDYFIRNL
Sbjct: 131 YEPTSMRAIRARYDPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMALPEEYRDYFIRNL 190
Query: 207 HDALSGHTSANVEEAVAYSEHSAVKCIGMTIETRPDYCLGPHLRQMLSYGCTRLEIGVQS 266
HDALSGHTS NV EAV YSE S KC+G+TIETRPDYCL HL ML YGCTRLEIGVQS
Sbjct: 191 HDALSGHTSNNVTEAVRYSERSNTKCVGITIETRPDYCLKRHLSDMLGYGCTRLEIGVQS 250
Query: 267 TYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAHMMPDLPNVGVERDLESFREFFENPS 326
YEDVARDTNRGHTV AV + F LAKDAGFKVVAHMMPDLPNVG+ERD+E F EFFENP+
Sbjct: 251 VYEDVARDTNRGHTVRAVCESFHLAKDAGFKVVAHMMPDLPNVGMERDVEQFIEFFENPA 310
Query: 327 FRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQLVDIVARILALVPPWTRVYRVQRDI 386
FR DGLK+YPTLVIRGTGLYELWKTGRY++Y P LVD+VARILALVPPWTRVYRVQRDI
Sbjct: 311 FRPDGLKLYPTLVIRGTGLYELWKTGRYKSYSPSALVDLVARILALVPPWTRVYRVQRDI 370
Query: 387 PMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTREAGIQDIHHKIKPEEVELVRRDYMA 446
PMPLV+SGVE GNLRELALARM D+G +CRDVRTRE GIQ+IHHK++P +VEL+RRDY+A
Sbjct: 371 PMPLVSSGVEHGNLRELALARMKDMGTECRDVRTREVGIQEIHHKVRPYQVELIRRDYVA 430
Query: 447 NEGWETFLSYEDVRQDILVGLLRLRRCGRNTTCPELVGKCSIVRELHVYGTAVPVHGRDT 506
N GWETFLSYED QDIL+GLLRLRRC + PEL G SIVRELHVYG+ VPV RD
Sbjct: 431 NGGWETFLSYEDPEQDILIGLLRLRRCSPQSFRPELKGGVSIVRELHVYGSVVPVSSRDP 490
Query: 507 EKLQHQGYGTLLMEEAERIARMEHRSTKIAVISGVGTRHYYRKLGYELEGPYMVKSL 564
K QHQG+G +LMEEAERIAR EH S+K+AVISGVGTR+YYRK+GYELEGPYMVK+L
Sbjct: 491 SKFQHQGFGMMLMEEAERIARDEHGSSKLAVISGVGTRNYYRKMGYELEGPYMVKNL 547
BLAST of CmaCh11G000540 vs. TAIR 10
Match: AT5G50320.1 (radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein ) HSP 1 Score: 1062.4 bits (2746), Expect = 1.3e-310 Identity = 512/564 (90.78%), Postives = 541/564 (95.92%), Query Frame = 0
Query: 1 MATAVVAE-SARKLPRPGRGGFEGHGFSEEEGRVRAIAEIVNSMVDLSRKGQNVDLNALK 60
MATAVV +K PRPG+GG++G G +EEE RVRAI+EIV++M++ S + +NVDLNA+K
Sbjct: 1 MATAVVMNGELKKQPRPGKGGYQGRGLTEEEARVRAISEIVSTMIERSHRNENVDLNAIK 60
Query: 61 SAACRKYGLARAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120
+AACRKYGLARAPKLVEMIAALP+S+RE LLPKLRAKPVRTASGIAVVAVMSKPHRCPHI
Sbjct: 61 TAACRKYGLARAPKLVEMIAALPDSERETLLPKLRAKPVRTASGIAVVAVMSKPHRCPHI 120
Query: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180
ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV
Sbjct: 121 ATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSV 180
Query: 181 DKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHSAVKCIGMTIET 240
DKVEFILMGGTFMSLPA+YRD+FIRNLHDALSGHTSANVEEAVAYSEHSA KCIGMTIET
Sbjct: 181 DKVEFILMGGTFMSLPAEYRDFFIRNLHDALSGHTSANVEEAVAYSEHSATKCIGMTIET 240
Query: 241 RPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300
RPDYCLGPHLRQML YGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV
Sbjct: 241 RPDYCLGPHLRQMLIYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVV 300
Query: 301 AHMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP 360
AHMMPDLPNVGVERD+ESF+EFFE+PSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP
Sbjct: 301 AHMMPDLPNVGVERDMESFKEFFESPSFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPP 360
Query: 361 EQLVDIVARILALVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR 420
EQLVDIVARIL++VPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR
Sbjct: 361 EQLVDIVARILSMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVR 420
Query: 421 TREAGIQDIHHKIKPEEVELVRRDYMANEGWETFLSYEDVRQDILVGLLRLRRCGRNTTC 480
TREAGIQDIHHKIKPE+VELVRRDY ANEGWETFLSYED RQDILVGLLRLR+CG+N TC
Sbjct: 421 TREAGIQDIHHKIKPEQVELVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGKNVTC 480
Query: 481 PELVGKCSIVRELHVYGTAVPVHGRDTEKLQHQGYGTLLMEEAERIARMEHRSTKIAVIS 540
PEL+GKCS+VRELHVYGTAVPVHGRD +KLQHQGYGTLLMEEAERIAR EHRS KI VIS
Sbjct: 481 PELMGKCSVVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIARREHRSNKIGVIS 540
Query: 541 GVGTRHYYRKLGYELEGPYMVKSL 564
GVGTRHYYRKLGYELEGPYMVK L
Sbjct: 541 GVGTRHYYRKLGYELEGPYMVKHL 564
BLAST of CmaCh11G000540 vs. TAIR 10
Match: AT5G63290.1 (Radical SAM superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 3.8e-04 Identity = 28/120 (23.33%), Postives = 58/120 (48.33%), Query Frame = 0
Query: 235 MTIETRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDA 294
+++E P G L+ ++ G R+ +GVQ+ +++ + R H V+ V + K+
Sbjct: 164 ISMEMDPGTFDGQKLKDLMKLGVNRVSLGVQAFQDELLKACGRAHGVSQVYEAIEFVKEC 223
Query: 295 GFKVVA-HMMPDLPNVGVERDLESFREFFENPSFRADGLKIYPTLVIRGTGLYELWKTGR 354
G + + ++ LP+ +E ES R E+ + + + +Y V +GT L+ G+
Sbjct: 224 GVENWSMDLISSLPHQTLEMWEESLRLAIES---QPNHVSVYDLQVEQGTKFGNLYTPGQ 280
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q93ZR1 | 1.8e-309 | 90.78 | Elongator complex protein 3 OS=Arabidopsis thaliana OX=3702 GN=HAG3 PE=1 SV=1 | [more] |
| Q7X7L3 | 8.4e-307 | 90.38 | Elongator complex protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ELP3 PE=... | [more] |
| Q5ZHS1 | 3.7e-246 | 75.79 | Elongator complex protein 3 OS=Gallus gallus OX=9031 GN=ELP3 PE=2 SV=1 | [more] |
| Q9VQZ6 | 3.1e-245 | 74.35 | Elongator complex protein 3 OS=Drosophila melanogaster OX=7227 GN=Elp3 PE=2 SV=1 | [more] |
| Q5RIC0 | 5.4e-245 | 75.23 | Elongator complex protein 3 OS=Danio rerio OX=7955 GN=elp3 PE=2 SV=3 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G50320.1 | 1.3e-310 | 90.78 | radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) ... | [more] |
| AT5G63290.1 | 3.8e-04 | 23.33 | Radical SAM superfamily protein | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR006638 | Elp3/MiaB/NifB | SMART | SM00729 | MiaB | coord: 106..368
e-value: 2.5E-34
score: 130.1 |
| IPR034687 | Elongator complex protein 3-like | PIRSF | PIRSF005669 | HAT_Elp3 | coord: 22..564
e-value: 1.0E-245
score: 814.2 |
| IPR034687 | Elongator complex protein 3-like | TIGRFAM | TIGR01211 | TIGR01211 | coord: 51..563
e-value: 4.7E-221
score: 732.8 |
| IPR034687 | Elongator complex protein 3-like | SFLD | SFLDF00344 | ELP3-like | coord: 54..563
e-value: 0.0
score: 639.2 |
| IPR034687 | Elongator complex protein 3-like | PANTHER | PTHR11135:SF7 | ELONGATOR COMPLEX PROTEIN 3 | coord: 2..563 |
| IPR007197 | Radical SAM | PFAM | PF04055 | Radical_SAM | coord: 124..318
e-value: 5.6E-18
score: 65.9 |
| IPR007197 | Radical SAM | PROSITE | PS51918 | RADICAL_SAM | coord: 99..389
score: 13.577015 |
| None | No IPR available | GENE3D | 3.40.630.30 | | coord: 415..564
e-value: 5.1E-9
score: 38.5 |
| None | No IPR available | PIRSR | PIRSR000167-2 | PIRSR000167-2 | coord: 231..313
e-value: 7.7E-7
score: 26.5 |
| None | No IPR available | SFLD | SFLDG01086 | elongater_protein-like | coord: 54..563
e-value: 0.0
score: 639.2 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..25 |
| None | No IPR available | CDD | cd01335 | Radical_SAM | coord: 113..360
e-value: 3.08042E-7
score: 49.2542 |
| None | No IPR available | SUPERFAMILY | 102114 | Radical SAM enzymes | coord: 136..375 |
| IPR000182 | GNAT domain | PFAM | PF00583 | Acetyltransf_1 | coord: 416..552
e-value: 1.8E-8
score: 34.6 |
| IPR000182 | GNAT domain | PROSITE | PS51186 | GNAT | coord: 413..564
score: 12.575592 |
| IPR032432 | Radical SAM, C-terminal extension | PFAM | PF16199 | Radical_SAM_C | coord: 330..408
e-value: 1.3E-31
score: 108.5 |
| IPR039661 | ELP3/YhcC | PANTHER | PTHR11135 | HISTONE ACETYLTRANSFERASE-RELATED | coord: 2..563 |
| IPR016181 | Acyl-CoA N-acyltransferase | SUPERFAMILY | 55729 | Acyl-CoA N-acyltransferases (Nat) | coord: 314..559 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0051301 |
cell division |
| biological_process |
GO:0009294 |
DNA mediated transformation |
| biological_process |
GO:0035265 |
organ growth |
| biological_process |
GO:0006779 |
porphyrin-containing compound biosynthetic process |
| biological_process |
GO:0010928 |
regulation of auxin mediated signaling pathway |
| biological_process |
GO:2000025 |
regulation of leaf formation |
| biological_process |
GO:0090708 |
specification of plant organ axis polarity |
| biological_process |
GO:0002926 |
tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation |
| cellular_component |
GO:0005634 |
nucleus |
| cellular_component |
GO:0000791 |
euchromatin |
| cellular_component |
GO:0033588 |
elongator holoenzyme complex |
| cellular_component |
GO:0005829 |
cytosol |
| molecular_function |
GO:0051539 |
4 iron, 4 sulfur cluster binding |
| molecular_function |
GO:0004109 |
coproporphyrinogen oxidase activity |
| molecular_function |
GO:0046872 |
metal ion binding |
| molecular_function |
GO:0008080 |
N-acetyltransferase activity |
| molecular_function |
GO:0000049 |
tRNA binding |
| molecular_function |
GO:0106261 |
tRNA uridine(34) acetyltransferase activity |
| molecular_function |
GO:0003824 |
catalytic activity |
| molecular_function |
GO:0051536 |
iron-sulfur cluster binding |
|
