CmaCh11G000030 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G000030
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Floricaula/leafy-like transcription factor
Location	Cma_Chr11: 11395 .. 18321 (+)
RNA-Seq Expression	CmaCh11G000030
Synteny	CmaCh11G000030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAGAAGCCCTCTCCGCCACTTTGTTCAAATGGGATCCTCGAGGAATGGTGGGGGGAGGCGGCGGCGCATCCCTCCCAGCACCACTGCCGCCCTACTCGCTGCGGCCCAGGGAATTGGAACTGGGAGGCCTGGAGGAGTTGTTCCAGGCTTACGGGATCAGGTACTACACCGCCGCTAAAATTGCGGAGCTGGGATTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTGGAGGATATGATAAACAGCCTCTCTCATATTTTCCGGTGGGAACTTCTGGTAGGTGAGAGATACGGAATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTGTAGATGACGAGATGGATTCCTCCAGGCGCCGGCACCTCTTCTCCAATGACACCCATAACAACGTGGTCCTGGATGCCCTTTCCCAGGAAGGTCAGATAACTCTATTTTTCTTTCCCTTACTTTTTCCTGCTCATACATTTATTTGTGTAAATAGCCAAATATTGGTGTTTTATACATGGAAGCAGTGAGGGTTGTCATAGTAGGTAGAGAATAAGGCATGACGAGGCGTGGTTATAATAACATTACAGGGCTATCGGAAGAGCCGGTGCAGCAGGAAAAAGAGGTGGTTGGGAGCGGAGGAGGAGGAACTTGGGAGGCAGTGTTGAAATATCATCACTAGCCCAATAGAGTCAAGCCCAATAATTGTACTAGCCCAATAGAGTCAAGCCTAATTGTACGAGCCCAGTATATTTATTTTAGTAGAGATTTTAGGAGAAAGAGATGTAGATATTTTAGGAGAAAGATTCAATTTGTTAGGTCTAGATTCAAATCGGTTAGGTCTAGATTTAGATTGGTTAAATATAGATTGTTTACTCTTAGTATAAATACCCCCACCCTACCTAGGTTATTCATCTAAGAAATCTAAAAACAATAAAAAGCAGAAGTATTCTACAGAGTGTCTTGTATTCTCTTCTCGATTGGTCTTAATAAAGAGAGCGAGTGTTTCCCACAGTGAGTTGTGTTCAACATTTGGTATCAGAGCGAGGTTAGTGTAGGTTATCTGATCTCTTGGAATCCTTAGTATGCTCTGTGGTTGCAGCTCTGCCTGATCTTCCACATCAGAAACGATTTCTTGAGATTAGTGGTGAGTGAGTTTCTTTTGTGTCGTGAGAAGTCTGTGACTCTGCAAGTCTTGTGTCAAAAGAACTTGTTTGGTATTACTGAGGTATGGCCAACACGATGAGTGATTTCCAAATCGTTGGAGGAATTAAGAAACTCAACAACAACAACTACAACACGTGGGCAACATGCATGATGTCCTATTTACAAGGACAGGATCTTTGGGAGATCGTTGGCGGGTGTGAAACTACGCCGCCAGAGGAGGATTCTAACGACGCCTTGCGCAAATGGAGAATCAAAGCAGGCAAAGCAATGTTTGCCTTGAAGACCACCATCGGAGAAGAGATGTTAGAACATATTTGGGATGACAAGACACCGAAAGAAGCATGGGACACATTCGTGATGTTGTTCTCAAAGAAGAATGATACGAGACTACAACTTCTGGAGAATGAGTTGTTGTCAATTTCACAACGTGATATGACGATTGCTCAGTACTTCCACAAGGTCAAATCGATCTGTCGGGAGATTACTGAACTAGACCCAAAGTCCGCCATTGTAGAATCTCGAATGAAGAGGATTATAATCCACGGATTGCGACCAGAATATCGAAGCTTCATTGCTGCTGTACAAGGATGGCCCACTCAACCATCACTGGTAGAGTTCGAAAATTTGTTAGCCAGCCAAGAAGCCATGGCTAAACAAATGGGAGGCTTCACGTTGAAGGGTGAAGAAGCACTCTACACGAGTGAAAGTCAGAGCAATAATAGGCCGTCTACCAGACGTGGATACAATGGTGACAAAAGAAGAAGCCACCAAGGGATTGCACAACCTGAGAGAGCTCAGAAGAACGACAACAAGAGTTTTCAAAGAACGAGATTTGGTGGTATTTGCTATAACTGCGGGAAAAAGGGCCATATGTCTAGAGATTGTTGGTCCAGGAAAAAGACCATTGAAAACAATGTGGCAATATCCAAAAAGAAGATAGAAGATGAATGGGATGCAGAGGTACTATGTCCCATAGAAGAAGACGAGCTAGCACTCATGGCGACAATGGAAGACCATATCAACTATGAGAATGACTGGATCGTTGATTCAGGATGTTCAAATCACATGACTGGCGATCAGAGAAAATTGCAAGACAAGAAAGAGTACAAAGGAAGTCGTATGGTACGTACAGCAAATAACACACAGTTATCAATTGCTCAAATCGGCAATACGACAATCATGCCTGGCAATAAGTCTGATACAGTGTCGCTACATAATGTTTATCATGTACCGGGTATAAAGAAGAACTTGTTGTCAGTGTCACAACTAACAACATCAGGAAGCTATGTCTTGTTTGGGCCAGAAGATGTAAAAGTTTATCAAGATGTTAAGATAATAGGAAAGCCGACGATAGAAGGACGAAGAGTGGAGTCTGTCTACGTTCTATCTGCAGAGTCTGCCTATGTTGACAAGACCCGAAAGAATGAGACGACAGATCTATGGCATGCAAGATTGGGACATATTAGCTACCATAAGTTGAAGCTGATTATGGAGAAATCTATGCTCAAAGGTCTACCACAACTGGAAGTCAAAACAGACGTTGTCTGCGCTGGATGTCAGTATGGTAAAGCTCATCAATTACCATACAAAGAGTCAAGTTTCAAAGCAAAGAAACCATTAGAGTTAGTTCACTCTGATTTGTTCGGCCCAGTCAAACAAGCATCGATCAGCGGAATGCGGTATATGGTGACATTTATTGACGACTACTCAAGATATGTGTGGATTTTCTTTATGAAAGAAAAGTCTGACACGTTCTCAAAGTTTCAAGAATTCAAGATGATGGTCGAAGGAGAAGTAGGAGCGAAGATTCGTTGTCTACGTTCAGACAATGGCGGAGAATACACGTCAGATGAGTTCGATCAATATTTACACGAGTGTGGGATACGACGTCAATTTACATGTGCCAACACGCCACAACAAAATGGTGTAGCAGAAAGAAAGAATCGACACCTTGCAGAAACCTGTCGAAGCATGTTACACGCAAAGAACGTTCCAGGAAGATTTTGGGCTGAAGCTATGCGAACTGCTGCCCATGTGATCAACAAGCTTCCTCAACCAAAGCTAGGGTTCGTCTCACCATTTGAGATACTATGGGATATGAAACCTACAATTAGTTACTTCCGAGTATTTGGCTGTGTTTGCTATGTATTTGTGCCTGACCATCTACGTAGCAAGTTTGACAAGAAAGCAGTCAAGTGTGTATTTGTTGGATACGACAATCAAAGAAAAGGATGGAGGTGCTGTGATCCAACAAGTGGAAAATACTATACATCAAGAGATGTAGTTTTTGATGAAGCATCTACATGGTGGTCCTCGGAGAAGAAAGTCTTATCAGATTCAAACATTGAAGAAATTCTACAACAGAAGCTGGGGGAGCAAACTACACAAATTCAATCAAATTTCGATGCATCTGAAAGTCCAAGCGACATTGATATTGACAAGCAGGAGGTGACTCAATCAAGCGAATCTGATAAAAATGAAACAACACATCAACAACTTAGGCGATCAAATAGAATCCGAAGGCCAAATCCTAAGTATGCAAATGCAGCTATTGTAGAAGATAGAGTTTACGAACCAGAGACATATGAAGAAGCATCACAAAACTCGGTTTGGCAGAAAGCGATGGAGGAAGAAATTATAGCCTTGGAGCATAATCAAACTTGGGAACTAGTGCCAAGACTAGGAGATATCAAACCCGTCTCTTGCAAGTGGGTCTATAAAATAAAGCGTCGACCGGATGGATCAATCGAGAGATACAAGGCTCGACTCGTGGCTCGAGGATTTTCTCAACAATATGGACTAGATTATGATGAAACATTCAGTCCAGTGGCAAAGATTACTACCGTACGAGTTCTGCTAGCACTCGCAGCAAGTAAAGATTGGAAACTGTGGCAAATGGATGTGAAGAATGCCTTCTTGCACGGAGAGCTAGACAGGGAGATTTATATGAACCAACCAAAGGGATTTGAGAGTGCAGCTAATCCTAATTATGTATGCAAGCTTAGAAAAGCTCTTTATGGACTGAAACAAGCACCGAGAGCTTGGTATGGTAAGATTGCTGAATTTCTTACCCAAAGTGGTTATTCAGTTGCGCATGCAGACTCAAGCCTATTCATCAAAGAAAGAGAAGGAAATTTGACAATTGTGTTGGTCTACGTGGACGATTTGATTATCACCGGGGACGATGAAAGAGAAATTTATCAAACAAGAGAAAATTTATCAATACGCTTTCAGATGAAAGAGCTAGGAGAGCTTAAACACTTCTTAGGCCTAGAAGTTGATCGCACAGATGAAGGACTGTTTCTCTGCCAACAAAAGTATACCAGAGACATGCTTCAGAAGTTCAACATGTTAGAGTGCAAGCAAGTTTCAACACCGATGGAGATAAATGCCAAGATTTGTGCACATGAAGGCAAAGAGTTGAACGATGAAACAACGTACCGACAACTAGTAGGTAGTCTTATCTACCTAACTTTAACTCGACCTGATATCTCGTATGCAGTTGGGGTTATGAGTCGATACATGCAAAGTCCAAAGAAGCCTCATCTGGATGCAGCTCGACGGATCTTGAGATATATCAAAGGTACAATCGACTATGGTCTTTTGTACAAAAGAAGCAAAGACTGCAAGCTAGTTGGATACTGTGATGCTGACTATGCAGGAGACCACGATACTCGGAGGTCAACCACTGGGTATGTGTTCAAGTTTGGTTCGGGAACAATTTCTTGGTGTAGCAAGAGACAACCAACAGTATCATTATCAACTACAGAAGCAGAGTATAGAGCAGCGGCTGGAGCAGCCCAGGAAAGTACATGGCTAAAACTCTTGATGGAAGATTTGCACCAGAAAATTGACTATCCAATATCACTTCTTTGCGACAACCAATCTGCGATTCGCCTTGCAGAAAATCCAGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACTACCATTTCATTAGAGAGAAGGTCCTAAAGGAAGAAATTGAGATGCAGCAGATCAAGACAGATGACCAAGTGGCAGACTTGTTTACAAAAGGGTTGAATACTAGCAAACATGAGAGCTTTCGCTGTCAGCTCAACATGATGCAGCGAATGAGGACTAGTGCTGAGGGGGAGTGTTGAAATATCATCACTAGCCCAATAGAGTCAAGCCCAATAATTGTACTAGCCCAATAGAGTCAAGCCTAATTGTACGAGCCCAGTATATTTATTTTAGTAGAGATTTTAGGAGAAAGAGATGTAGATATTTTAGGAGAAAGATTCAATTTGTTAGGTCTAGATTCAAATCGGTTAGGTCTAGATTTAGATTGGTTAAATATAGATTGTTTACTCTTAGTATAAATACCCCCACCCTACCTAGGTTATTCATCTAAGAAATCTAAAAACAATAAAAAGCAGAAGTATTCTACAGAGTGTCTTGTATTCTCTTCTCGATTGGTCTTAATAAAGAGAGCGAGTGTTTCCCACAGTGAGTTGTGTTCAACAGGCAGTTGCAGCGGGTGAGATGAGGAAGAAGCAGCGGAAGAGAAACGGATCAAAGAAGAAGCAGGTGATGGTGATGGAGGAGGATCATCACGATGAAACTGAGGAGGGAGGTGGGGAGGAGGAGGATAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGGGGGAAAAAGAACGGCCTTGACTATCTCTTCCACCTCTATGAGCAGTGTCGTGAGTTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGAGGAGAAAAATGTCCCACTAAGGTATTCTTTCTCTCTCTCTCCCTCTCTCTTTACTTTTTCAAATTCCACCACCAGAAATTAACTTAACTTAACTACCCTCCTCTATCCGCTGTTCAAAACATGACGATCACTCTAAATATCATCTAATTTAGAAAATAAATTTTTGGACAATGGAGGTATGAAGGGAAACTAAAGGAGAGGGTCCGTAGGGCCTAAATGAAAAGTAGAAAGCGTGACAAGTGAAGCGCAGTGAAGGGAGAGGTGGGTGCGTTGTCCGTGTCAAATTAACTTTTTGTGATGATTTCGTACTGTATGAGACTGAGAGGGGCGGGCAGTCAAAGATGGCGATAGAATATAGGTTAAAGGATAAGTATAGGGAGAAAAGGAAATAATAATAATAATAATAACTTGTTTTGAATTGTTGCTTAAATCTTCCACGTTTGAGTATATATATGTAATGCAAGTGGCATGTATGCGACCCAGCAGGTGACAAACCAGGTGTTTAGATATGCGAAGAAGGTGGGAGCAAGTTACATAAACAAGCCAAAAATGAGACACTACGTGCACTGCTATGCGTTGCATTGTCTGGACGAGGAAGCGTCCAACGCGTTGAGGAGGGTTTTCAAAGAGAGGGGTGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTTTGGTAGCCACAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTATGTGCCCACTAAACTCCGCCAACTCTGCCACGCCGAGCGCAACAGTGCCAAAGCCTCCACCTCCGCCGCCGTAAATCACTTGCCATTTTAACTTCATACTCTCTTATCGCTGCCTTCAGCTTCTATCATCCGCTAGGAAGCAAAAGTAGGACATTATTGTTGGATACGAAATGGATGCTACCTTTTCTTTCCATATCAAATTATATATAACAATGTGTAGACCCCACCCCCGC

mRNA sequence

ATGGATCCAGAAGCCCTCTCCGCCACTTTGTTCAAATGGGATCCTCGAGGAATGGTGGGGGGAGGCGGCGGCGCATCCCTCCCAGCACCACTGCCGCCCTACTCGCTGCGGCCCAGGGAATTGGAACTGGGAGGCCTGGAGGAGTTGTTCCAGGCTTACGGGATCAGGTACTACACCGCCGCTAAAATTGCGGAGCTGGGATTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTGGAGGATATGATAAACAGCCTCTCTCATATTTTCCGGTGGGAACTTCTGGTAGGTGAGAGATACGGAATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTGTAGATGACGAGATGGATTCCTCCAGGCGCCGGCACCTCTTCTCCAATGACACCCATAACAACGTGGTGATGGTGATGGAGGAGGATCATCACGATGAAACTGAGGAGGGAGGTGGGGAGGAGGAGGATAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGGGGGAAAAAGAACGGCCTTGACTATCTCTTCCACCTCTATGAGCAGTGTCGTGAGTTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGAGGAGAAAAATGTCCCACTAAGGTGACAAACCAGGTGTTTAGATATGCGAAGAAGGTGGGAGCAAGTTACATAAACAAGCCAAAAATGAGACACTACGTGCACTGCTATGCGTTGCATTGTCTGGACGAGGAAGCGTCCAACGCGTTGAGGAGGGTTTTCAAAGAGAGGGGTGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTTTGGTAGCCACAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTATGTGCCCACTAAACTCCGCCAACTCTGCCACGCCGAGCGCAACAGTGCCAAAGCCTCCACCTCCGCCGCCGTAAATCACTTGCCATTTTAACTTCATACTCTCTTATCGCTGCCTTCAGCTTCTATCATCCGCTAGGAAGCAAAAGTAGGACATTATTGTTGGATACGAAATGGATGCTACCTTTTCTTTCCATATCAAATTATATATAACAATGTGTAGACCCCACCCCCGC

Coding sequence (CDS)

ATGGATCCAGAAGCCCTCTCCGCCACTTTGTTCAAATGGGATCCTCGAGGAATGGTGGGGGGAGGCGGCGGCGCATCCCTCCCAGCACCACTGCCGCCCTACTCGCTGCGGCCCAGGGAATTGGAACTGGGAGGCCTGGAGGAGTTGTTCCAGGCTTACGGGATCAGGTACTACACCGCCGCTAAAATTGCGGAGCTGGGATTCACCGTCAGCACCCTCCTGGACATGAAAGACGAAGAGTTGGAGGATATGATAAACAGCCTCTCTCATATTTTCCGGTGGGAACTTCTGGTAGGTGAGAGATACGGAATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTGTAGATGACGAGATGGATTCCTCCAGGCGCCGGCACCTCTTCTCCAATGACACCCATAACAACGTGGTGATGGTGATGGAGGAGGATCATCACGATGAAACTGAGGAGGGAGGTGGGGAGGAGGAGGATAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGGGGGAAAAAGAACGGCCTTGACTATCTCTTCCACCTCTATGAGCAGTGTCGTGAGTTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGAGGAGAAAAATGTCCCACTAAGGTGACAAACCAGGTGTTTAGATATGCGAAGAAGGTGGGAGCAAGTTACATAAACAAGCCAAAAATGAGACACTACGTGCACTGCTATGCGTTGCATTGTCTGGACGAGGAAGCGTCCAACGCGTTGAGGAGGGTTTTCAAAGAGAGGGGTGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTTTGGTAGCCACAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATCTGGTATGTGCCCACTAAACTCCGCCAACTCTGCCACGCCGAGCGCAACAGTGCCAAAGCCTCCACCTCCGCCGCCGTAAATCACTTGCCATTTTAA

Protein sequence

MDPEALSATLFKWDPRGMVGGGGGASLPAPLPPYSLRPRELELGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSHIFRWELLVGERYGIKAAVRAERRRVDDEMDSSRRRHLFSNDTHNNVVMVMEEDHHDETEEGGGEEEDNMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNSAKASTSAAVNHLPF

Homology

[Close]

BLAST of CmaCh11G000030 vs. ExPASy Swiss-Prot
Match: O48559 (Protein UNIFOLIATA OS=Pisum sativum OX=3888 GN=UNI PE=2 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.6e-135
Identity = 263/402 (65.42%), Postives = 288/402 (71.64%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGMVGGGGGASLPAPLP------------PYSLRPREL--ELGGL 60
           MDP+A +A+LFKWDPR ++     ++ P+P P            P +  P  L  ELGGL
Sbjct: 1   MDPDAFTASLFKWDPRTVL-----STAPSPRPQLLDYAVTPTTAPMTYHPARLPRELGGL 60

Query: 61  EELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSHIFRWELLVGERYGIKA 120
           EELFQAYGIRYYTAAKIAELGFTVSTL+DMKD+EL+DM+NSLS IFRW+LLVGERYGIKA
Sbjct: 61  EELFQAYGIRYYTAAKIAELGFTVSTLVDMKDDELDDMMNSLSQIFRWDLLVGERYGIKA 120

Query: 121 AVRAERRRVDDEMDSSRRRHLFSNDTHNNV------------------------------ 180
           A+RAERRR+D+E    +RR L S DT N +                              
Sbjct: 121 AIRAERRRLDEE--EIKRRGLLSGDTTNALDALSQEGLSEEPVVQREKEAMGSGGGSTWE 180

Query: 181 VMVMEE----------------DHHDETEEGGGEEEDNME-----VSERQREHPFIVTEP 240
           V V+EE                + H E EEG  EEEDN+        ERQREHPFIVTEP
Sbjct: 181 VAVVEERRKRQQIRRRRMKMKGNDHGENEEGEEEEEDNISGGGVGGGERQREHPFIVTEP 240

Query: 241 GEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKVGASYIN 300
            EVARGKKNGLDYLFHLYEQCREFLIQVQ IAKERGEKCPTKVTNQVFRYAKK GASYIN
Sbjct: 241 AEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKERGEKCPTKVTNQVFRYAKKAGASYIN 300

Query: 301 KPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATAAAQGWDIDAI 336
           KPKMRHYVHCYALHCLDEE SN LRR FKERGENVGAWRQACYKPLVA AA QGWDIDAI
Sbjct: 301 KPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAI 360

[Close]

BLAST of CmaCh11G000030 vs. ExPASy Swiss-Prot
Match: Q40504 (Floricaula/leafy homolog 1 OS=Nicotiana tabacum OX=4097 GN=FL1 PE=2 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.7e-135
Identity = 264/414 (63.77%), Postives = 291/414 (70.29%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGMVGGG----GGASLPAPLPP-----------YSLRPRELELGG 60
           MDPEA SA+LFKWDPRG +         A  P P PP           YS+R R  ELGG
Sbjct: 1   MDPEAFSASLFKWDPRGAMPPPTRLLEAAVAPPPPPPVLPPPQPLSAAYSIRTR--ELGG 60

Query: 61  LEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSHIFRWELLVGERYGIK 120
           LEELFQAYGIRYYTAAKIAELGFTV+TLLDMKDEEL+DM+NSLS IFRWELLVGERYGIK
Sbjct: 61  LEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDDMMNSLSQIFRWELLVGERYGIK 120

Query: 121 AAVRAERRRVDDEMDSSRRRHLFSNDTHNNVVMVMEED---------------------- 180
           AA+RAERRR+++E +  RR HL S+   N +  + +E                       
Sbjct: 121 AAIRAERRRLEEE-ELRRRSHLLSDGGTNALDALSQEGLSEEPVQQQEREAVGSGGGGTT 180

Query: 181 ---------------------------------HHDETEEGGGEEEDNME-----VSERQ 240
                                              DE  E G E+E N+      +SERQ
Sbjct: 181 WEVVAAVGGGRMKQRRRKKVVSTGRERRGRASAEEDEETEEGQEDEWNINDAGGGISERQ 240

Query: 241 REHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRY 300
           REHPFIVTEPGEVARGKKNGLDYLFHLYEQCR+FLIQVQNIAKERGEKCPTKVTNQVFRY
Sbjct: 241 REHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRY 300

Query: 301 AKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATA 335
           AKK GASYINKPKMRHYVHCYALHCLDEEASNALRR FKERGENVGAWRQACYKPLVA A
Sbjct: 301 AKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIA 360

[Close]

BLAST of CmaCh11G000030 vs. ExPASy Swiss-Prot
Match: O04064 (Floricaula/leafy homolog OS=Populus trichocarpa OX=3694 GN=FL PE=2 SV=2)

HSP 1 Score: 481.5 bits (1238), Expect = 7.8e-135
Identity = 257/381 (67.45%), Postives = 285/381 (74.80%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGMVGGGGG--ASLPAPLPP----YSLRPRELELGGLEELFQAYG 60
           MDPEA +A+LFKWD R MV         +P P  P    +++RPR  EL GLEELFQAYG
Sbjct: 1   MDPEAFTASLFKWDTRAMVPHPNRLLEMVPPPQQPPAAAFAVRPR--ELCGLEELFQAYG 60

Query: 61  IRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSHIFRWELLVGERYGIKAAVRAERRR 120
           IRYYTAAKIAELGFTV+TLLDMKDEEL++M+NSLS IFRW+LLVGERYGIKAAVRAERRR
Sbjct: 61  IRYYTAAKIAELGFTVNTLLDMKDEELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRR 120

Query: 121 VDDEMDSSRRRHLFSNDTHNNVVMVM------EEDHHDETEEGG---------------- 180
           +D+E    RRR L S D + N +  +      EE    + E  G                
Sbjct: 121 LDEE--DPRRRQLLSGDNNTNTLDALSQEGFSEEPVQQDKEAAGSGGRGTWEAVAAGERK 180

Query: 181 ----------------GEEEDNMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQC 240
                           G+ E    + ERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQC
Sbjct: 181 KQSGRKKGQRKVVDLDGDGEHGGAICERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQC 240

Query: 241 REFLIQVQNIAKERGEKCPTKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEAS 300
           R+FLIQVQ+IAKERGEKCPTKVTNQVFRYAKK GASYINKPKMRHYVHCYALHCLDE+AS
Sbjct: 241 RDFLIQVQSIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDAS 300

Query: 301 NALRRVFKERGENVGAWRQACYKPLVATAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCH 336
           NALRR FKERGENVGAWRQACYKPLVA A+ QGWDID+IFNAHPRLAIWYVPTKLRQLC+
Sbjct: 301 NALRRAFKERGENVGAWRQACYKPLVAIASRQGWDIDSIFNAHPRLAIWYVPTKLRQLCY 360

[Close]

BLAST of CmaCh11G000030 vs. ExPASy Swiss-Prot
Match: O22621 (Protein ALF OS=Petunia hybrida OX=4102 GN=ALF PE=2 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 3.0e-134
Identity = 260/414 (62.80%), Postives = 292/414 (70.53%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRG--------MVGGGGGASLPAPLPP-------YSLRPRELELGG 60
           MDPEA SA+LFKWDPRG        +         P PLPP       YS+R R  ELGG
Sbjct: 1   MDPEAFSASLFKWDPRGAMPPPNRLLEAVAPPQPPPPPLPPPQPLPPAYSIRTR--ELGG 60

Query: 61  LEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSHIFRWELLVGERYGIK 120
           LEE+FQAYGIRYYTAAKI ELGFTV+TLLDMKD+EL+DM+NSLS IFRWELLVGERYGIK
Sbjct: 61  LEEMFQAYGIRYYTAAKITELGFTVNTLLDMKDDELDDMMNSLSQIFRWELLVGERYGIK 120

Query: 121 AAVRAERRRVDDEMDSSRRRHLFSNDTHNNVVMVMEE----------------------- 180
           AA+RAERRR+++E    RRRH+ S+   N +  + +E                       
Sbjct: 121 AAIRAERRRLEEE--EGRRRHILSDGGTNVLDALSQEGLSEEPVQQQEREAAGSGGGGTA 180

Query: 181 ------------------------------DHHDETEEGGGEEED---NME----VSERQ 240
                                         +  ++TEEG  + ED   N E    +SERQ
Sbjct: 181 WEVVAPGGGRMRQRRRKKVVVGRERRGSSMEEDEDTEEGQEDNEDYNINNEGGGGISERQ 240

Query: 241 REHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRY 300
           REHPFIVTEPGEVARGKKNGLDYLFHLYEQCR+FLIQVQNIAKERGEKCPTKVTNQVFR+
Sbjct: 241 REHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRF 300

Query: 301 AKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATA 335
           AKK GASYINKPKMRHYVHCYALHCLDE+ASNALRR FKERGENVGAWRQACYKPLVA A
Sbjct: 301 AKKAGASYINKPKMRHYVHCYALHCLDEDASNALRRAFKERGENVGAWRQACYKPLVAIA 360

[Close]

BLAST of CmaCh11G000030 vs. ExPASy Swiss-Prot
Match: Q40505 (Floricaula/leafy homolog 2 OS=Nicotiana tabacum OX=4097 GN=FL2 PE=2 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 8.6e-134
Identity = 264/417 (63.31%), Postives = 291/417 (69.78%), Query Frame = 0


Query: 1   MDPEALSATLFKWDPRGMVGGG----GGASLPAPLPP-----------YSLRPRELELGG 60
           MDPEA SA+LFKWDPRG +         A  P P PP           YS++ R  ELGG
Sbjct: 1   MDPEAFSASLFKWDPRGAMPPPTRLLEAAVAPPPPPPALPPPQPLSAAYSIKTR--ELGG 60

Query: 61  LEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSHIFRWELLVGERYGIK 120
           LEELFQAYGIRYYTAAKIAELGFTV+TLLDMKDEEL+DM+NSLS IFRWELLVGERYGIK
Sbjct: 61  LEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEELDDMMNSLSQIFRWELLVGERYGIK 120

Query: 121 AAVRAERRRVDDEMDSSRRRHLFSNDTHNNVVMVMEED---------------------- 180
           AA+RAERRR+++E +  RR HL S+   N +  + +E                       
Sbjct: 121 AAIRAERRRLEEE-ELRRRGHLLSDGGTNALDALSQEGLSEEPVQQQEREAVGSGGGGTT 180

Query: 181 ---------------------------------HHDETEEGGGEEEDNME-----VSERQ 240
                                              DE  E G E++ N+      +SERQ
Sbjct: 181 WEVVAAAGGGRMKQRRRKKVVAAGREKRGGASAEEDEETEEGQEDDWNINDASGGISERQ 240

Query: 241 REHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRY 300
           REHPFIVTEPGEVARGKKNGLDYLFHLYEQCR+FLIQVQNIAKERGEKCPTKVTNQVFRY
Sbjct: 241 REHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRY 300

Query: 301 AKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATA 335
           AKK GASYINKPKMRHYVHCYALHCLDEEASNALRR FKERGENVGAWRQACYKPLVA A
Sbjct: 301 AKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIA 360

[Close]

BLAST of CmaCh11G000030 vs. TAIR 10
Match: AT5G61850.1 (floral meristem identity control protein LEAFY (LFY) )

HSP 1 Score: 450.3 bits (1157), Expect = 1.4e-126
Identity = 243/399 (60.90%), Postives = 279/399 (69.92%), Query Frame = 0


Query: 1   MDPEALSATLFKWDP-RGMVGGGGGASLPAPLPPYSLRPRE----LELGGLEELFQAYGI 60
           MDPE  ++ LF+W+P R +V       +P PL    + P+     + LGGLE LF  YGI
Sbjct: 1   MDPEGFTSGLFRWNPTRALV--QAPPPVPPPLQQQPVTPQTAAFGMRLGGLEGLFGPYGI 60

Query: 61  RYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSHIFRWELLVGERYGIKAAVRAERRRV 120
           R+YTAAKIAELGFT STL+ MKDEELE+M+NSLSHIFRWELLVGERYGIKAAVRAERRR+
Sbjct: 61  RFYTAAKIAELGFTASTLVGMKDEELEEMMNSLSHIFRWELLVGERYGIKAAVRAERRRL 120

Query: 121 --DDEMDSSRRRHLF-----SNDTHNNVVMVMEE-------DHHDETEEGG--------- 180
             ++E +SSRRRHL       + TH+ +  + +E          D+T+  G         
Sbjct: 121 QEEEEEESSRRRHLLLSAAGDSGTHHALDALSQEGLSEEPVQQQDQTDAAGNNGGGGSGY 180

Query: 181 ---------------------------------GEEEDNME--------VSERQREHPFI 240
                                            GE++D M+         +ERQREHPFI
Sbjct: 181 WDAGQGKMKKQQQQRRRKKPMLTSVETDEDVNEGEDDDGMDNGNGGSGLGTERQREHPFI 240

Query: 241 VTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKVGA 300
           VTEPGEVARGKKNGLDYLFHLYEQCREFL+QVQ IAK+RGEKCPTKVTNQVFRYAKK GA
Sbjct: 241 VTEPGEVARGKKNGLDYLFHLYEQCREFLLQVQTIAKDRGEKCPTKVTNQVFRYAKKSGA 300

Query: 301 SYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATAAAQGWD 331
           SYINKPKMRHYVHCYALHCLDEEASNALRR FKERGENVG+WRQACYKPLV  A   GWD
Sbjct: 301 SYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGSWRQACYKPLVNIACRHGWD 360

The following BLAST results are available for this feature:

BLAST of CmaCh11G000030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48559	1.6e-135	65.42	Protein UNIFOLIATA OS=Pisum sativum OX=3888 GN=UNI PE=2 SV=1	[more]
Q40504	2.7e-135	63.77	Floricaula/leafy homolog 1 OS=Nicotiana tabacum OX=4097 GN=FL1 PE=2 SV=1	[more]
O04064	7.8e-135	67.45	Floricaula/leafy homolog OS=Populus trichocarpa OX=3694 GN=FL PE=2 SV=2	[more]
O22621	3.0e-134	62.80	Protein ALF OS=Petunia hybrida OX=4102 GN=ALF PE=2 SV=1	[more]
Q40505	8.6e-134	63.31	Floricaula/leafy homolog 2 OS=Nicotiana tabacum OX=4097 GN=FL2 PE=2 SV=1	[more]

BLAST of CmaCh11G000030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61850.1	1.4e-126	60.90	floral meristem identity control protein LEAFY (LFY)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035079	Floricaula/Leafy protein, SAM domain	PFAM	PF01698	SAM_LFY	coord: 43..118 e-value: 1.3E-43 score: 146.8
IPR035209	Floricaula/leafy, DNA-binding C-terminal domain	PFAM	PF17538	C_LFY_FLO	coord: 160..322 e-value: 9.8E-108 score: 357.2
IPR038276	Floricaula/leafy, C-terminal domain superfamily	GENE3D	1.10.4180.10	Protein LEAFY	coord: 161..329 e-value: 2.6E-102 score: 341.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..165
None	No IPR available	PANTHER	PTHR36079:SF1	PROTEIN LEAFY	coord: 1..135 coord: 142..335
IPR002910	Floricaula/leafy protein	PANTHER	PTHR36079	PROTEIN LEAFY	coord: 142..335 coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G000030.1	CmaCh11G000030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding