CmaCh10G011250 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G011250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	HIG1 domain-containing protein
Location	Cma_Chr10: 7727531 .. 7729751 (-)
RNA-Seq Expression	CmaCh10G011250
Synteny	CmaCh10G011250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTCGCCTCCGTCCGCCGCCCACCGATTTTCAGGCGTTTGCCAAATTCGACTTTCCTTCTCTTATAAACAATTAGCCATTCCCCCATTACCGAAACCTCCGTTCTTTCTCTCTTCTCTCCCTTTTCCTTCGCCGATCGATCTGTGTTCACGATCCCCATGGCTGAATCCAAGGGCAAACTCGAATCTCTCAAGGAGTGGGTTTCGGAACACAAGCTTCGCACCGTTGGTAGTTCAACTCATCAATCCTCTCCTCTATTCCATTTTCTGATTTCCGATTGATTGATTATGTTTAATCTTCTCAGTACTTGAAATTTCGTTTCGTGGGGTATGGTTTTGGTTGTAATTGAATTGTTGTTGCTGTTTGGGGTGAAGGATCTCTGTGGCTTAGCGGGATCGCGGGTTCTATTGCGTATAATTGGTCTCAACCTAATATGAAGACTAGCGTGAAGATCATCCATGCTAGGTGACTTTCTAATTTTTTTTTATGTTTTTCGTTAATCCTGGACTTGGAGTTCTCCTAGTGCTGATTATTTATGGAGTTTTGATTCTGGAATGAATTAGTGAACGATCCTTTTTGGCTGAAAGTCTGTAAAAATCATCCCTCTTTTGGGATCTTGACGAGTCTTGAAATATTGAGGATGTTCTGTAGCTATTCAGAGAAAACAAAGATTGTTGTCTCCTTAATTTTGTTTGAAGTAGAACAATTTTGGTTTCTCTTTAACAAACAGTTGATTGATCGTGTTTGTTCTTAAATTTTTGTTCTAGAATTCTGAAAATTATAATTGGAAACTACTTTCTGGAAGCTCTCAATCCTTTTTTCCCTCCTTATTCCTTGTCCTATGATTGTGTTCTTTGTTTTACTGATGAACTCCAAACACGCTTAGCTTCTGCCTTAGGTGATTTTGTGGCCTTGTACTGTTCATGACCTCTAATTGGAGTGCCCAACACAAGCTTTTTTTGTAAATTGTAACTTCTCATACCATCAGCTTATATTAGAGGGCCTTCATTGTAGCCACTCAAGGATGCCTTGTCCCTTTGACCCTTGTGCTGTTCGGGCTCGTTCGGTGCCTTTTTGGATGAAACCTGTGGCTTGGTTCTCATAAAAAAATTATTGAGAACACCCTTGAACATTTTCATTGAACTTTAAAATATCGTGTCTAATTATTGAAAATGTGACACGACTATATAGCTCTTCTCGTTATTTCATATCGATGTCTATTACATCCATATTTCCTCCTTTATGATCAGGATTAAACATGGAATTTAGTGGAAGTTTGACAATTACCATTGAGATTTCGAACATAGACTCGACAAAATTGAAAGTCGATAAAAGTTCATGAAGGATCGAATATTAGGGATCAAAATGAAAAACTTGACATTAGCCAAATTCATTTGGGATCCTGTATAAGATCAGCCTTTTGTCTCTGTGTTTCGTATCAAGAATTCTTTGTAGACGAAGAGATGTCAAAGGGGCTGCTTACTTCCCAAATAGATCCTCCTACATCTGTATATAAACGCTAGTTTATCAAGAATATGCAAGAAAAGCACTTCGGATTGTTGATTCATTGCCAGAGATGGGTCCTAAAATCCATCTAAGTTATTTGTTTTATATTTTTCATTCTATGTTTTTTCTCGGGCTCATTCGTAAAGTTGGTTAAATCGGAGCTCTTTGTTTAGGGGCAGATGCATAGAAGTTTTTCTATGACAGAACATTTTAAATGGCTTACATTGGCTTTCTTTTTCATGTTTTTTCTGCATGAGTTTCAATCCTGATGTGTTAAGTTCTTCAAAATCACTCGCAGGTTACACGCACAGGCTTTGACCTTAGCTGCTCTTGCTGGCGCTGCGGTCGTCGAATATTATGAACACAAATCTGGAGAGAAGGCCGAGCGATATGCCAAGTTCCTTCCCATTGATAACTACTCACACAAGGACTGAGTTTTTGTTGTTTTGCTCTTTCTATACTGGAGGGTAATAAAGTAGTTTCATTCTGAGGCTTAGAATTCTTACTTCTCCATTCTTTTTTAATATCATTATAGGGGGGCGTTGTTCTGCTCAATTCATGTAAGCAATTTGTTTGTAAACATGGAAGTGAATGTTTTTGTATTATGAATGAAATATTGGTTGGTTCCTGAGGAGCCTTGTTCCATTTTGTCTCACTTTTCTTCCGAGAATATCTTTTATTCCGCTGTAAGACCTCACATCGATTGGAAAGGA

mRNA sequence

TTTCTTCGCCTCCGTCCGCCGCCCACCGATTTTCAGGCGTTTGCCAAATTCGACTTTCCTTCTCTTATAAACAATTAGCCATTCCCCCATTACCGAAACCTCCGTTCTTTCTCTCTTCTCTCCCTTTTCCTTCGCCGATCGATCTGTGTTCACGATCCCCATGGCTGAATCCAAGGGCAAACTCGAATCTCTCAAGGAGTGGGTTTCGGAACACAAGCTTCGCACCGTTGGATCTCTGTGGCTTAGCGGGATCGCGGGTTCTATTGCGTATAATTGGTCTCAACCTAATATGAAGACTAGCGTGAAGATCATCCATGCTAGGTTACACGCACAGGCTTTGACCTTAGCTGCTCTTGCTGGCGCTGCGGTCGTCGAATATTATGAACACAAATCTGGAGAGAAGGCCGAGCGATATGCCAAGTTCCTTCCCATTGATAACTACTCACACAAGGACTGAGTTTTTGTTGTTTTGCTCTTTCTATACTGGAGGGTAATAAAGTAGTTTCATTCTGAGGCTTAGAATTCTTACTTCTCCATTCTTTTTTAATATCATTATAGGGGGGCGTTGTTCTGCTCAATTCATGTAAGCAATTTGTTTGTAAACATGGAAGTGAATGTTTTTGTATTATGAATGAAATATTGGTTGGTTCCTGAGGAGCCTTGTTCCATTTTGTCTCACTTTTCTTCCGAGAATATCTTTTATTCCGCTGTAAGACCTCACATCGATTGGAAAGGA

Coding sequence (CDS)

ATGGCTGAATCCAAGGGCAAACTCGAATCTCTCAAGGAGTGGGTTTCGGAACACAAGCTTCGCACCGTTGGATCTCTGTGGCTTAGCGGGATCGCGGGTTCTATTGCGTATAATTGGTCTCAACCTAATATGAAGACTAGCGTGAAGATCATCCATGCTAGGTTACACGCACAGGCTTTGACCTTAGCTGCTCTTGCTGGCGCTGCGGTCGTCGAATATTATGAACACAAATCTGGAGAGAAGGCCGAGCGATATGCCAAGTTCCTTCCCATTGATAACTACTCACACAAGGACTGA

Protein sequence

MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQALTLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD

Homology

[Close]

BLAST of CmaCh10G011250 vs. ExPASy TrEMBL
Match: A0A6J1HUL1 (uncharacterized protein LOC111467946 OS=Cucurbita maxima OX=3661 GN=LOC111467946 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of CmaCh10G011250 vs. ExPASy TrEMBL
Match: A0A6J1CWJ8 (uncharacterized protein LOC111015231 OS=Momordica charantia OX=3673 GN=LOC111015231 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.0e-46
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of CmaCh10G011250 vs. ExPASy TrEMBL
Match: A0A6J1HC22 (uncharacterized protein LOC111462074 OS=Cucurbita moschata OX=3662 GN=LOC111462074 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.8e-46
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLP+DNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPVDNYSHKD 98

[Close]

BLAST of CmaCh10G011250 vs. ExPASy TrEMBL
Match: A0A6J1I284 (uncharacterized protein LOC111469164 OS=Cucurbita maxima OX=3661 GN=LOC111469164 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 98

[Close]

BLAST of CmaCh10G011250 vs. ExPASy TrEMBL
Match: A0A6J1EFV1 (uncharacterized protein LOC111432132 OS=Cucurbita moschata OX=3662 GN=LOC111432132 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 98

[Close]

BLAST of CmaCh10G011250 vs. NCBI nr
Match: XP_022968827.1 (uncharacterized protein LOC111467946 [Cucurbita maxima])

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of CmaCh10G011250 vs. NCBI nr
Match: XP_022145879.1 (uncharacterized protein LOC111015231 [Momordica charantia])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 96/98 (97.96%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKD 98

[Close]

BLAST of CmaCh10G011250 vs. NCBI nr
Match: XP_022961523.1 (uncharacterized protein LOC111462074 [Cucurbita moschata] >XP_023515964.1 uncharacterized protein LOC111779972 [Cucurbita pepo subsp. pepo] >KAG6590446.1 hypothetical protein SDJN03_15869, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.6 bits (488), Expect = 1.6e-45
Identity = 95/98 (96.94%), Postives = 97/98 (98.98%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLP+DNYSHKD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPVDNYSHKD 98

[Close]

BLAST of CmaCh10G011250 vs. NCBI nr
Match: XP_022924720.1 (uncharacterized protein LOC111432132 [Cucurbita moschata] >XP_022970205.1 uncharacterized protein LOC111469164 [Cucurbita maxima] >XP_023530300.1 uncharacterized protein LOC111792905 [Cucurbita pepo subsp. pepo] >KAG6588489.1 hypothetical protein SDJN03_17054, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022318.1 hypothetical protein SDJN02_16049 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44
Identity = 95/98 (96.94%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAESKGKLESL+EWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAESKGKLESLREWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYS KD
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSRKD 98

[Close]

BLAST of CmaCh10G011250 vs. NCBI nr
Match: XP_004135606.1 (uncharacterized protein LOC101204590 [Cucumis sativus] >XP_008450622.1 PREDICTED: uncharacterized protein LOC103492155 [Cucumis melo] >KAA0050906.1 HIG_1_N domain-containing protein [Cucumis melo var. makuwa] >KGN66059.1 hypothetical protein Csa_007690 [Cucumis sativus] >TYK10257.1 HIG_1_N domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 93/98 (94.90%), Postives = 96/98 (97.96%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE KGKLESL++WVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL
Sbjct: 1  MAEPKGKLESLRDWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYYEHKSG KAERYAKFLPIDNYSHK+
Sbjct: 61 TLAALAGAAVVEYYEHKSGAKAERYAKFLPIDNYSHKE 98

[Close]

BLAST of CmaCh10G011250 vs. TAIR 10
Match: AT3G05550.1 (Hypoxia-responsive family protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-37
Identity = 77/98 (78.57%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          M ESK K E +++WVS+HKLRTVG LWLSGI GSIAYNWSQP MKTSVKIIHARLHAQAL
Sbjct: 1  MVESKTKFEEIRKWVSDHKLRTVGCLWLSGITGSIAYNWSQPAMKTSVKIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDNYSHKD 99
          TLAALAGAAVVEYY+HK+ E   RY KFLP +N SHKD
Sbjct: 61 TLAALAGAAVVEYYDHKT-EATNRYPKFLPPENLSHKD 97

[Close]

BLAST of CmaCh10G011250 vs. TAIR 10
Match: AT5G27760.1 (Hypoxia-responsive family protein )

HSP 1 Score: 137.5 bits (345), Expect = 5.8e-33
Identity = 69/93 (74.19%), Postives = 78/93 (83.87%), Query Frame = 0


Query: 1  MAESKGKLESLKEWVSEHKLRTVGSLWLSGIAGSIAYNWSQPNMKTSVKIIHARLHAQAL 60
          MAE K K+  ++EW+ EHKLRTVG LWLSGI+GSIAYNWS+P MKTSV+IIHARLHAQAL
Sbjct: 1  MAEPKTKVAEIREWIIEHKLRTVGCLWLSGISGSIAYNWSKPAMKTSVRIIHARLHAQAL 60

Query: 61 TLAALAGAAVVEYYEHKSGEKAERYAKFLPIDN 94
          TLAALAGAA VEYY+HKSG   +R  KFL  DN
Sbjct: 61 TLAALAGAAAVEYYDHKSG-ATDRIPKFLKPDN 92

The following BLAST results are available for this feature:

BLAST of CmaCh10G011250 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G011250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUL1	5.4e-47	100.00	uncharacterized protein LOC111467946 OS=Cucurbita maxima OX=3661 GN=LOC111467946...	[more]
A0A6J1CWJ8	6.0e-46	97.96	uncharacterized protein LOC111015231 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1HC22	7.8e-46	96.94	uncharacterized protein LOC111462074 OS=Cucurbita moschata OX=3662 GN=LOC1114620...	[more]
A0A6J1I284	5.1e-45	96.94	uncharacterized protein LOC111469164 OS=Cucurbita maxima OX=3661 GN=LOC111469164...	[more]
A0A6J1EFV1	5.1e-45	96.94	uncharacterized protein LOC111432132 OS=Cucurbita moschata OX=3662 GN=LOC1114321...	[more]

BLAST of CmaCh10G011250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968827.1	1.1e-46	100.00	uncharacterized protein LOC111467946 [Cucurbita maxima]	[more]
XP_022145879.1	1.2e-45	97.96	uncharacterized protein LOC111015231 [Momordica charantia]	[more]
XP_022961523.1	1.6e-45	96.94	uncharacterized protein LOC111462074 [Cucurbita moschata] >XP_023515964.1 unchar...	[more]
XP_022924720.1	1.0e-44	96.94	uncharacterized protein LOC111432132 [Cucurbita moschata] >XP_022970205.1 unchar...	[more]
XP_004135606.1	3.1e-44	94.90	uncharacterized protein LOC101204590 [Cucumis sativus] >XP_008450622.1 PREDICTED...	[more]

BLAST of CmaCh10G011250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05550.1	1.0e-37	78.57	Hypoxia-responsive family protein	[more]
AT5G27760.1	5.8e-33	74.19	Hypoxia-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007667	Hypoxia induced protein, domain	PFAM	PF04588	HIG_1_N	coord: 17..67 e-value: 3.6E-10 score: 39.9
IPR007667	Hypoxia induced protein, domain	PROSITE	PS51503	HIG1	coord: 1..83 score: 21.260445
None	No IPR available	GENE3D	6.10.140.1320		coord: 20..78 e-value: 1.5E-7 score: 33.1
None	No IPR available	PANTHER	PTHR28018:SF7	HYPOXIA-RESPONSIVE FAMILY PROTEIN-RELATED	coord: 4..98
IPR040153	Respiratory supercomplex factor 2, mitochondrial	PANTHER	PTHR28018	RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G011250.1	CmaCh10G011250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033617	mitochondrial cytochrome c oxidase assembly
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005746	mitochondrial respirasome