CmaCh10G011050 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G011050
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	F-box protein At3g07870-like
Location	Cma_Chr10: 7409954 .. 7410941 (+)
RNA-Seq Expression	CmaCh10G011050
Synteny	CmaCh10G011050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCATGCTCAAGGAACCAAATTTCCAAACTCGTACTTGATGTCATTGACCTAATAGTCAGCAAACTCCTTATTGTTTGTCGAGTTGTAGGCTGGTCTGCAAAACCTGGAACAATGTGATCTTAAGTTCTAAGCATCACTCTTCAATCTCGGCGGCTTCCAACTTCTACCTTGCACATGTTTATTCAGAAAACCGTGATCATCCCAATTCTTATCGCTTTCGTAATCTCCATTGCTTGGAATTGGATCCCGACCACTTGGAAGGGGTGAGGAGTGTTGCTTCATTTAACTTGAAGCGTAAGTATTTTAATTGTTCTTTTATCTCAACTATCAATTCGTGCAATGGACTCTTGGCTTTCGTGGTCATTAAAAAGACAAATAGCTGGCTTAGCCCGAATAGTGTCGTGATATTAAATCCCAAGACGAATGAGTACTTCGAACTCCCCAAAGATGAATTCAAAGGGAATTGGTTTACTTGCTTCTATGAATTTGAATTTTGTCCGAAAACAAAGCAATACAAAGTAGTAAGAAGCTCTACTGTTCGTGATAGAAACTCCATCGTCCATAACTACAAAACAGAGATTTTTTCCTTTGGGACCCAGCCGGAATGGACGCATATTGAGTCACTGACTTGTTCTTTTAATGGATGTCATGGTGTTTACTTTAACGGAGGGCTGCATTGGATTGGACAAAATAATCTTGGTCCGGATGTCATTTATCGTCTAAATATGGAAGATGAGAAATACAAGCAGATTCCTTTTCCTTGTATTGGAATATTTAACGGTGCCGTTCATTTAACTCTTTCTATGGAGGAATATGAGTATAGGGTGTGGAAGATGAAAGAAAATGGTTCGTGGATTAAAGCATTTAGTGTCATCGTACCAAATGTCAATAAAAATATACTTTTTTCTCAAAATCGACAGTGGAACAGATTAAAATATATAAAGATGGAAAGATCTTGTGTATTTGGGCGGGAGCTGAATTAG

mRNA sequence

ATGGCTCATGCTCAAGGAACCAAATTTCCAAACTCGCTGGTCTGCAAAACCTGGAACAATGTGATCTTAAGTTCTAAGCATCACTCTTCAATCTCGGCGGCTTCCAACTTCTACCTTGCACATGTTTATTCAGAAAACCGTGATCATCCCAATTCTTATCGCTTTCGTAATCTCCATTGCTTGGAATTGGATCCCGACCACTTGGAAGGGGTGAGGAGTGTTGCTTCATTTAACTTGAAGCGTAAGTATTTTAATTGTTCTTTTATCTCAACTATCAATTCGTGCAATGGACTCTTGGCTTTCGTGGTCATTAAAAAGACAAATAGCTGGCTTAGCCCGAATAGTGTCGTGATATTAAATCCCAAGACGAATGAGTACTTCGAACTCCCCAAAGATGAATTCAAAGGGAATTGGTTTACTTGCTTCTATGAATTTGAATTTTGTCCGAAAACAAAGCAATACAAAGTAGTAAGAAGCTCTACTGTTCGTGATAGAAACTCCATCGTCCATAACTACAAAACAGAGATTTTTTCCTTTGGGACCCAGCCGGAATGGACGCATATTGAGTCACTGACTTGTTCTTTTAATGGATGTCATGGTGTTTACTTTAACGGAGGGCTGCATTGGATTGGACAAAATAATCTTGGTCCGGATGTCATTTATCGTCTAAATATGGAAGATGAGAAATACAAGCAGATTCCTTTTCCTTGTATTGGAATATTTAACGGTGCCGTTCATTTAACTCTTTCTATGGAGGAATATGAGTATAGGGTGTGGAAGATGAAAGAAAATGGTTCGTGGATTAAAGCATTTAGTGTCATCGTACCAAATGTCAATAAAAATATACTTTTTTCTCAAAATCGACAGTGGAACAGATTAAAATATATAAAGATGGAAAGATCTTGTGTATTTGGGCGGGAGCTGAATTAG

Coding sequence (CDS)

ATGGCTCATGCTCAAGGAACCAAATTTCCAAACTCGCTGGTCTGCAAAACCTGGAACAATGTGATCTTAAGTTCTAAGCATCACTCTTCAATCTCGGCGGCTTCCAACTTCTACCTTGCACATGTTTATTCAGAAAACCGTGATCATCCCAATTCTTATCGCTTTCGTAATCTCCATTGCTTGGAATTGGATCCCGACCACTTGGAAGGGGTGAGGAGTGTTGCTTCATTTAACTTGAAGCGTAAGTATTTTAATTGTTCTTTTATCTCAACTATCAATTCGTGCAATGGACTCTTGGCTTTCGTGGTCATTAAAAAGACAAATAGCTGGCTTAGCCCGAATAGTGTCGTGATATTAAATCCCAAGACGAATGAGTACTTCGAACTCCCCAAAGATGAATTCAAAGGGAATTGGTTTACTTGCTTCTATGAATTTGAATTTTGTCCGAAAACAAAGCAATACAAAGTAGTAAGAAGCTCTACTGTTCGTGATAGAAACTCCATCGTCCATAACTACAAAACAGAGATTTTTTCCTTTGGGACCCAGCCGGAATGGACGCATATTGAGTCACTGACTTGTTCTTTTAATGGATGTCATGGTGTTTACTTTAACGGAGGGCTGCATTGGATTGGACAAAATAATCTTGGTCCGGATGTCATTTATCGTCTAAATATGGAAGATGAGAAATACAAGCAGATTCCTTTTCCTTGTATTGGAATATTTAACGGTGCCGTTCATTTAACTCTTTCTATGGAGGAATATGAGTATAGGGTGTGGAAGATGAAAGAAAATGGTTCGTGGATTAAAGCATTTAGTGTCATCGTACCAAATGTCAATAAAAATATACTTTTTTCTCAAAATCGACAGTGGAACAGATTAAAATATATAAAGATGGAAAGATCTTGTGTATTTGGGCGGGAGCTGAATTAG

Protein sequence

MAHAQGTKFPNSLVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVRSVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKDEFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLTCSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIPFPCIGIFNGAVHLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNILFSQNRQWNRLKYIKMERSCVFGRELN

Homology

[Close]

BLAST of CmaCh10G011050 vs. ExPASy TrEMBL
Match: A0A6J1HA55 (F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111461998 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 9.4e-154
Identity = 260/304 (85.53%), Postives = 279/304 (91.78%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWN+VILSSKHH SIS AS+F+LAHVYS++RD PNS+ FRNLHCLELDPDH+EGVR
Sbjct: 34  LVCKTWNDVILSSKHHPSISHASDFFLAHVYSDSRDRPNSHCFRNLHCLELDPDHMEGVR 93

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNLKRKYF  SFISTINSCN LLAFVV KKTNSWLSPNSVVILNP TNEYFELPKD
Sbjct: 94  SVASFNLKRKYFKRSFISTINSCNRLLAFVVTKKTNSWLSPNSVVILNPITNEYFELPKD 153

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           +FKGNWFTC+Y F FCPKTKQYKVVRSSTVRDRNSI+HNYKTEIF+F T+PEWT IES T
Sbjct: 154 KFKGNWFTCYYGFGFCPKTKQYKVVRSSTVRDRNSIIHNYKTEIFAFETRPEWTRIESPT 213

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSFNGCHGVY NGGLHWIGQNNLGPDVIYRLNMEDEKY+QIP       FPCIGIFNGA+
Sbjct: 214 CSFNGCHGVYLNGGLHWIGQNNLGPDVIYRLNMEDEKYEQIPFPDDDGYFPCIGIFNGAI 273

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNILFSQNRQWNRLKYIKMERSCVFG 310
           HLTLSME Y+YRVWKMKE+GSWIKAFSVI+P+VNKNIL SQNRQWNRLKY+KMERSCVFG
Sbjct: 274 HLTLSMEGYKYRVWKMKEDGSWIKAFSVIIPDVNKNILSSQNRQWNRLKYVKMERSCVFG 333

[Close]

BLAST of CmaCh10G011050 vs. ExPASy TrEMBL
Match: A0A6J1HDZ2 (F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111462000 PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 3.5e-140
Identity = 238/278 (85.61%), Postives = 256/278 (92.09%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWN+VILSSKHH SIS AS+F+LAHVYS++RD PNS+ FRNLHCLELDPDH+EGVR
Sbjct: 34  LVCKTWNDVILSSKHHPSISHASDFFLAHVYSDSRDRPNSHCFRNLHCLELDPDHMEGVR 93

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNLKRKYF  SFISTINSCNGLLAFVV KKTNSWLSPNSVVILNP TNEYFELPKD
Sbjct: 94  SVASFNLKRKYFKRSFISTINSCNGLLAFVVTKKTNSWLSPNSVVILNPITNEYFELPKD 153

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           +FKGNWFTC+Y F FCPKTKQYKVVRSSTVRDRNSI+HNYKTEIF+FGT+PEWT IES T
Sbjct: 154 KFKGNWFTCYYGFGFCPKTKQYKVVRSSTVRDRNSIIHNYKTEIFAFGTRPEWTRIESPT 213

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSFNGCHGVY NGGLHWIGQNNLGPDVIYRLNMEDEKY+QIP       FPCIGIFNGA+
Sbjct: 214 CSFNGCHGVYLNGGLHWIGQNNLGPDVIYRLNMEDEKYEQIPFPDDDGYFPCIGIFNGAI 273

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNIL 284
           HLTLSME Y+YRVWKMKE+G WIKAFSVI+P+VNKNIL
Sbjct: 274 HLTLSMEGYKYRVWKMKEDGLWIKAFSVIIPDVNKNIL 311

[Close]

BLAST of CmaCh10G011050 vs. ExPASy TrEMBL
Match: A0A6J1F4F5 (F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111440549 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.2e-137
Identity = 236/278 (84.89%), Postives = 251/278 (90.29%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWNNVILSSKHH SISAASNF+LAHVYSE+ D PNS+ FRNLHCLE DPDH+EGVR
Sbjct: 37  LVCKTWNNVILSSKHHPSISAASNFFLAHVYSESHDRPNSHHFRNLHCLESDPDHVEGVR 96

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNLK KYF  SFIS INSCNGLLAFVV KKTNSWLSPNSVVILNP TNEYFELPKD
Sbjct: 97  SVASFNLKHKYFKRSFISIINSCNGLLAFVVTKKTNSWLSPNSVVILNPITNEYFELPKD 156

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           ++KGNWFTC Y F FCPKTKQYKVVRSSTVRDRNSI+HNYKTEIF+FGT+PEWT IES T
Sbjct: 157 KYKGNWFTCCYGFGFCPKTKQYKVVRSSTVRDRNSIIHNYKTEIFAFGTRPEWTQIESPT 216

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSFNGCHGVY NGGLHWIGQNNLGPDVIYRLNMEDEKY+QIP       FPCIGIFNGA+
Sbjct: 217 CSFNGCHGVYLNGGLHWIGQNNLGPDVIYRLNMEDEKYEQIPFPSDDGYFPCIGIFNGAI 276

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNIL 284
           +LTLS+E Y+YRVWKMKE+G WIKAFSVIVP VNKNIL
Sbjct: 277 NLTLSVEGYKYRVWKMKEDGLWIKAFSVIVPYVNKNIL 314

[Close]

BLAST of CmaCh10G011050 vs. ExPASy TrEMBL
Match: A0A6J1HBS1 (F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111462004 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 9.5e-122
Identity = 214/278 (76.98%), Postives = 236/278 (84.89%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWNNVILSSKH  SISAASNF  AHVYS N D P+   FRNLHCLELDPDH+EGVR
Sbjct: 37  LVCKTWNNVILSSKHDPSISAASNFLFAHVYSNNGDRPS---FRNLHCLELDPDHVEGVR 96

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNL+RKYF  SFISTINSCNGLLAFVV K T  WLS N+VVILNP TNEYFE+PKD
Sbjct: 97  SVASFNLRRKYFRRSFISTINSCNGLLAFVVTKNTKRWLSSNTVVILNPMTNEYFEVPKD 156

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           EFKGNW TC Y F FCPKTK YKV+R+STV DRNSIVHNYK+EIF+FGT+ EWT IES +
Sbjct: 157 EFKGNWLTCSYGFGFCPKTKHYKVIRNSTVDDRNSIVHNYKSEIFAFGTRQEWTRIESPS 216

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSF+GCHGVY NGGLHW+GQN+L  DVIYRLNMEDEKY+QIP       FP I +FNGA+
Sbjct: 217 CSFHGCHGVYLNGGLHWVGQNDLRRDVIYRLNMEDEKYEQIPFPNDDGYFPYIRVFNGAL 276

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNIL 284
           HLTLSMEEYEYR+WKMKE+GSWIK+FSVI+P   KN+L
Sbjct: 277 HLTLSMEEYEYRIWKMKEDGSWIKSFSVIIP--TKNVL 309

[Close]

BLAST of CmaCh10G011050 vs. ExPASy TrEMBL
Match: A0A6J1HA63 (F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111462009 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 4.6e-116
Identity = 212/298 (71.14%), Postives = 233/298 (78.19%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWN+VILSSKH  SIS ASNF LAHVY    D      FRNLHCLELD DH+EGVR
Sbjct: 37  LVCKTWNDVILSSKHDPSISTASNFLLAHVYFNRCDR---LSFRNLHCLELDSDHVEGVR 96

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNL RKYF  SFISTINSCNGLLAFVV K T SWL+ N+VVILNP TNEYFELPKD
Sbjct: 97  SVASFNLCRKYFRRSFISTINSCNGLLAFVVTKNTKSWLNSNTVVILNPMTNEYFELPKD 156

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVH------NYKTEIFSFGTQPEWT 192
           EFKGNW TC Y F FCPKTK YKVVR+ST+ DRNS +       NYK+EIFSFGT+ EWT
Sbjct: 157 EFKGNWLTCSYGFGFCPKTKHYKVVRNSTIEDRNSTIEDRYSTVNYKSEIFSFGTRQEWT 216

Query: 193 HIESLTCSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIG 252
            IES +CSFNGCHGVY NGGLHWIGQ++L  DVIYRLNMEDEKYK IP       FPCIG
Sbjct: 217 RIESPSCSFNGCHGVYLNGGLHWIGQDDLYQDVIYRLNMEDEKYKHIPFPNDDGYFPCIG 276

Query: 253 IFNGAVHLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNILFSQNRQWNRLKYIK 298
           +FNGA+HLTLSME +EY +WKMKE+GSW KAFSVIVP+V+KNI         ++K  K
Sbjct: 277 VFNGALHLTLSMEGHEYTMWKMKEDGSWSKAFSVIVPDVSKNIFSFSKSTVEQVKICK 331

[Close]

BLAST of CmaCh10G011050 vs. NCBI nr
Match: XP_022961417.1 (F-box protein At3g07870-like [Cucurbita moschata])

HSP 1 Score: 552.7 bits (1423), Expect = 1.9e-153
Identity = 260/304 (85.53%), Postives = 279/304 (91.78%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWN+VILSSKHH SIS AS+F+LAHVYS++RD PNS+ FRNLHCLELDPDH+EGVR
Sbjct: 34  LVCKTWNDVILSSKHHPSISHASDFFLAHVYSDSRDRPNSHCFRNLHCLELDPDHMEGVR 93

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNLKRKYF  SFISTINSCN LLAFVV KKTNSWLSPNSVVILNP TNEYFELPKD
Sbjct: 94  SVASFNLKRKYFKRSFISTINSCNRLLAFVVTKKTNSWLSPNSVVILNPITNEYFELPKD 153

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           +FKGNWFTC+Y F FCPKTKQYKVVRSSTVRDRNSI+HNYKTEIF+F T+PEWT IES T
Sbjct: 154 KFKGNWFTCYYGFGFCPKTKQYKVVRSSTVRDRNSIIHNYKTEIFAFETRPEWTRIESPT 213

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSFNGCHGVY NGGLHWIGQNNLGPDVIYRLNMEDEKY+QIP       FPCIGIFNGA+
Sbjct: 214 CSFNGCHGVYLNGGLHWIGQNNLGPDVIYRLNMEDEKYEQIPFPDDDGYFPCIGIFNGAI 273

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNILFSQNRQWNRLKYIKMERSCVFG 310
           HLTLSME Y+YRVWKMKE+GSWIKAFSVI+P+VNKNIL SQNRQWNRLKY+KMERSCVFG
Sbjct: 274 HLTLSMEGYKYRVWKMKEDGSWIKAFSVIIPDVNKNILSSQNRQWNRLKYVKMERSCVFG 333

[Close]

BLAST of CmaCh10G011050 vs. NCBI nr
Match: XP_023546461.1 (F-box protein At3g07870-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 512.3 bits (1318), Expect = 2.9e-141
Identity = 241/278 (86.69%), Postives = 257/278 (92.45%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWNNVILSSK+H SISAASNF+LAHVYSE+RD PNS+RFRNLHCLELDPDH+EGVR
Sbjct: 37  LVCKTWNNVILSSKYHPSISAASNFFLAHVYSESRDRPNSHRFRNLHCLELDPDHVEGVR 96

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNLKRKYF  SFIS INSCNGLLAFVV KKTNSWLSPNSVVILNP TNEYFELPKD
Sbjct: 97  SVASFNLKRKYFKRSFISIINSCNGLLAFVVTKKTNSWLSPNSVVILNPITNEYFELPKD 156

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           ++KGNWFTC Y F FCPKTKQYKVVRSST+RDRNSI+HNYKTEIF+FGT+PEWT IES T
Sbjct: 157 KYKGNWFTCCYGFGFCPKTKQYKVVRSSTIRDRNSIIHNYKTEIFAFGTRPEWTQIESPT 216

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSFNGCHGVY NGGLHWIGQNNLGPDVIYRLNMEDEKY+QIP       FPCIGIFNGA+
Sbjct: 217 CSFNGCHGVYLNGGLHWIGQNNLGPDVIYRLNMEDEKYEQIPFPNDDGYFPCIGIFNGAI 276

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNIL 284
           HLTLSME Y+YRVWKMKE+GSWIKAFSVIVP+VNKNIL
Sbjct: 277 HLTLSMEGYKYRVWKMKEDGSWIKAFSVIVPDVNKNIL 314

[Close]

BLAST of CmaCh10G011050 vs. NCBI nr
Match: XP_022961419.1 (F-box protein At3g07870-like [Cucurbita moschata])

HSP 1 Score: 507.7 bits (1306), Expect = 7.2e-140
Identity = 238/278 (85.61%), Postives = 256/278 (92.09%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWN+VILSSKHH SIS AS+F+LAHVYS++RD PNS+ FRNLHCLELDPDH+EGVR
Sbjct: 34  LVCKTWNDVILSSKHHPSISHASDFFLAHVYSDSRDRPNSHCFRNLHCLELDPDHMEGVR 93

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNLKRKYF  SFISTINSCNGLLAFVV KKTNSWLSPNSVVILNP TNEYFELPKD
Sbjct: 94  SVASFNLKRKYFKRSFISTINSCNGLLAFVVTKKTNSWLSPNSVVILNPITNEYFELPKD 153

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           +FKGNWFTC+Y F FCPKTKQYKVVRSSTVRDRNSI+HNYKTEIF+FGT+PEWT IES T
Sbjct: 154 KFKGNWFTCYYGFGFCPKTKQYKVVRSSTVRDRNSIIHNYKTEIFAFGTRPEWTRIESPT 213

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSFNGCHGVY NGGLHWIGQNNLGPDVIYRLNMEDEKY+QIP       FPCIGIFNGA+
Sbjct: 214 CSFNGCHGVYLNGGLHWIGQNNLGPDVIYRLNMEDEKYEQIPFPDDDGYFPCIGIFNGAI 273

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNIL 284
           HLTLSME Y+YRVWKMKE+G WIKAFSVI+P+VNKNIL
Sbjct: 274 HLTLSMEGYKYRVWKMKEDGLWIKAFSVIIPDVNKNIL 311

[Close]

BLAST of CmaCh10G011050 vs. NCBI nr
Match: XP_023516668.1 (F-box protein At3g07870-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 504.6 bits (1298), Expect = 6.1e-139
Identity = 236/278 (84.89%), Postives = 256/278 (92.09%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           L+CKTWN+VIL+SKHH SISAASNF+LAHVYS +RD PNS+ FRNLHCL+LDPDH+EGVR
Sbjct: 34  LICKTWNDVILNSKHHPSISAASNFFLAHVYSGSRDRPNSHCFRNLHCLKLDPDHVEGVR 93

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNL+RKYF  SFISTINSCNGLLAFVV KKTNSWLSPNSVVILNP TNEYFELPKD
Sbjct: 94  SVASFNLERKYFKRSFISTINSCNGLLAFVVTKKTNSWLSPNSVVILNPITNEYFELPKD 153

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           ++KGNWFTC Y F FCPKTKQYKVVRSST+RDRNSI+HNYKTEIF+FGT+PEWT IES T
Sbjct: 154 KYKGNWFTCCYGFGFCPKTKQYKVVRSSTIRDRNSIIHNYKTEIFAFGTRPEWTQIESPT 213

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSFNGCHGVY NGGLHWIGQNNLGPDVIYRLNMEDEKY+QIP       FPCIGIFNGA+
Sbjct: 214 CSFNGCHGVYLNGGLHWIGQNNLGPDVIYRLNMEDEKYEQIPFPNDDGYFPCIGIFNGAI 273

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNIL 284
           HLTLSME Y+YRVWKMKE+GSWIKAFSVIVP+VNKNIL
Sbjct: 274 HLTLSMEGYKYRVWKMKEDGSWIKAFSVIVPDVNKNIL 311

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BLAST of CmaCh10G011050 vs. NCBI nr
Match: XP_022933323.1 (F-box protein At3g07870-like [Cucurbita moschata])

HSP 1 Score: 499.2 bits (1284), Expect = 2.5e-137
Identity = 236/278 (84.89%), Postives = 251/278 (90.29%), Query Frame = 0


Query: 13  LVCKTWNNVILSSKHHSSISAASNFYLAHVYSENRDHPNSYRFRNLHCLELDPDHLEGVR 72
           LVCKTWNNVILSSKHH SISAASNF+LAHVYSE+ D PNS+ FRNLHCLE DPDH+EGVR
Sbjct: 37  LVCKTWNNVILSSKHHPSISAASNFFLAHVYSESHDRPNSHHFRNLHCLESDPDHVEGVR 96

Query: 73  SVASFNLKRKYFNCSFISTINSCNGLLAFVVIKKTNSWLSPNSVVILNPKTNEYFELPKD 132
           SVASFNLK KYF  SFIS INSCNGLLAFVV KKTNSWLSPNSVVILNP TNEYFELPKD
Sbjct: 97  SVASFNLKHKYFKRSFISIINSCNGLLAFVVTKKTNSWLSPNSVVILNPITNEYFELPKD 156

Query: 133 EFKGNWFTCFYEFEFCPKTKQYKVVRSSTVRDRNSIVHNYKTEIFSFGTQPEWTHIESLT 192
           ++KGNWFTC Y F FCPKTKQYKVVRSSTVRDRNSI+HNYKTEIF+FGT+PEWT IES T
Sbjct: 157 KYKGNWFTCCYGFGFCPKTKQYKVVRSSTVRDRNSIIHNYKTEIFAFGTRPEWTQIESPT 216

Query: 193 CSFNGCHGVYFNGGLHWIGQNNLGPDVIYRLNMEDEKYKQIP-------FPCIGIFNGAV 252
           CSFNGCHGVY NGGLHWIGQNNLGPDVIYRLNMEDEKY+QIP       FPCIGIFNGA+
Sbjct: 217 CSFNGCHGVYLNGGLHWIGQNNLGPDVIYRLNMEDEKYEQIPFPSDDGYFPCIGIFNGAI 276

Query: 253 HLTLSMEEYEYRVWKMKENGSWIKAFSVIVPNVNKNIL 284
           +LTLS+E Y+YRVWKMKE+G WIKAFSVIVP VNKNIL
Sbjct: 277 NLTLSVEGYKYRVWKMKEDGLWIKAFSVIVPYVNKNIL 314

The following BLAST results are available for this feature:

BLAST of CmaCh10G011050 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G011050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HA55	9.4e-154	85.53	F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111461998 PE=4 ...	[more]
A0A6J1HDZ2	3.5e-140	85.61	F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111462000 PE=4 ...	[more]
A0A6J1F4F5	1.2e-137	84.89	F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111440549 PE=4 ...	[more]
A0A6J1HBS1	9.5e-122	76.98	F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111462004 PE=4 ...	[more]
A0A6J1HA63	4.6e-116	71.14	F-box protein At3g07870-like OS=Cucurbita moschata OX=3662 GN=LOC111462009 PE=4 ...	[more]

BLAST of CmaCh10G011050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961417.1	1.9e-153	85.53	F-box protein At3g07870-like [Cucurbita moschata]	[more]
XP_023546461.1	2.9e-141	86.69	F-box protein At3g07870-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961419.1	7.2e-140	85.61	F-box protein At3g07870-like [Cucurbita moschata]	[more]
XP_023516668.1	6.1e-139	84.89	F-box protein At3g07870-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933323.1	2.5e-137	84.89	F-box protein At3g07870-like [Cucurbita moschata]	[more]

BLAST of CmaCh10G011050 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 93..279 e-value: 1.1E-16 score: 58.9
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 12..278
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 12..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G011050.1	CmaCh10G011050.1	mRNA