CmaCh10G010830 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh10G010830
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionmajor pollen allergen Ole e 6-like
LocationCma_Chr10: 7109123 .. 7109776 (+)
RNA-Seq ExpressionCmaCh10G010830
SyntenyCmaCh10G010830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAGAAGATGATGGCAGTGTTTTTAATGTGTGTCATGGTGGTAAACGTACTACAATTCTCCACTGCTGACAATACAGCCGAAATGGAGGCAAAATTCAAGTCGTTTTTCGGAAACCTAGATAATGTGAAGGAAAAATTCAAGTCATGTGTTGAAACCTGCAACAAGGGATGCAATAACCAAGCTTCGTGTCATACTGAGTGTGAAACAAATTGCGGCAAAAAAGAAGTTGCTGGTATTTTTTTTCCATCTCTTTCACTAATTGGGTGAAGTTCAAATTCCAAGTTATTTGATTAGTTTGATAAAATTAAATATTTATAATGAAATTTGATACCCAAATTTAGGGTAACATCAAATATATAATATTTTAAATTTTATCCCAAAATTTAAACTTTTGTATTAATTTTATTTTTATGTTGTATTTATTTTGCAGATGAACTTCACATCAATGTGGCACATTGATACAATGAGTTTTGAAGTGAACAATTTGATGGAGAAGATCAAATATAATTTATTTAAATAACATTTGCCAGAGGAATTTTTATTTACTTTCTTTTCGAAATGCATTTTATTTATTTCAATTTCTTTGATATTGTTGGGTTTCTTTTAATATTTCTTGTCCACCAACAAATTTACAAAATTCAATAGATC

mRNA sequence

ATGGCTAAGAAGATGATGGCAGTGTTTTTAATGTGTGTCATGGTGGTAAACGTACTACAATTCTCCACTGCTGACAATACAGCCGAAATGGAGGCAAAATTCAAGTCGTTTTTCGGAAACCTAGATAATGTGAAGGAAAAATTCAAGTCATGTGTTGAAACCTGCAACAAGGGATGCAATAACCAAGCTTCGTGTCATACTGAGTGTGAAACAAATTGCGGCAAAAAAGAAGTTGCTGATGAACTTCACATCAATGTGGCACATTGATACAATGAGTTTTGAAGTGAACAATTTGATGGAGAAGATCAAATATAATTTATTTAAATAACATTTGCCAGAGGAATTTTTATTTACTTTCTTTTCGAAATGCATTTTATTTATTTCAATTTCTTTGATATTGTTGGGTTTCTTTTAATATTTCTTGTCCACCAACAAATTTACAAAATTCAATAGATC

Coding sequence (CDS)

ATGGCTAAGAAGATGATGGCAGTGTTTTTAATGTGTGTCATGGTGGTAAACGTACTACAATTCTCCACTGCTGACAATACAGCCGAAATGGAGGCAAAATTCAAGTCGTTTTTCGGAAACCTAGATAATGTGAAGGAAAAATTCAAGTCATGTGTTGAAACCTGCAACAAGGGATGCAATAACCAAGCTTCGTGTCATACTGAGTGTGAAACAAATTGCGGCAAAAAAGAAGTTGCTGATGAACTTCACATCAATGTGGCACATTGA

Protein sequence

MAKKMMAVFLMCVMVVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNKGCNNQASCHTECETNCGKKEVADELHINVAH
Homology
BLAST of CmaCh10G010830 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.1e-10
Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0

Query: 1  MAKKMMAVFLMCVMVVNVLQFSTA---DNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNK 60
          MAKKM+A+FLMC++VV  LQF++A   D  A+ EAKF +          K+KSC +TC K
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDA----------KYKSCFKTCEK 60

Query: 61 GC----NNQASCHTECETNCGKKEVADELHINV 87
           C    + Q+ C  +C+ +C +KEVAD+LHI +
Sbjct: 61 ECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

BLAST of CmaCh10G010830 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 8.1e-10
Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0

Query: 1  MAKKMMAVFLMCVMVVNVLQFSTA---DNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNK 60
          MAKKM+A+FLMC++VV  LQF++A   D  A+ EAKF +          K+KSC +TC K
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDA----------KYKSCFKTCEK 60

Query: 61 GC----NNQASCHTECETNCGKKEVADELHINV 87
           C    + Q+ C  +C+ +C +KEVAD+LHI +
Sbjct: 61 ECLENGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

BLAST of CmaCh10G010830 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-09
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0

Query: 1  MAKKMMAVFLMCVMVVNVLQFSTA---DNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNK 60
          MAKKMMAVFLMC++VV  LQF  A   D   + EAKF +          K+KSC ETC K
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDA----------KYKSCYETCEK 60

Query: 61 GC-----NNQASCHTECETNCGKKEVADELHINV 87
           C     N ++ C  +C+ +C +KE AD+LHI +
Sbjct: 61 ECLRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

BLAST of CmaCh10G010830 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09
Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 0

Query: 1  MAKKMMAVFLMCVMVVNVLQFSTAD---NTAEMEAKFKSFFGNLDNVKEKFKSCVETCNK 60
          MAKKMMAVFLMC++VV  LQF+TA+     A  EAKF +          K+K+C  TC K
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDA----------KYKACFVTCEK 60

Query: 61 GCNNQAS----CHTECETNCGKKEVADELHIN 86
           C  + S    C  +C+ +CG KE AD+LHI+
Sbjct: 61 ECIERGSGHSYCEVKCDEDCGAKEAADKLHIH 82

BLAST of CmaCh10G010830 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.0e-09
Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 1  MAKKMMAVFLMCVMVVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNKGC- 60
          MAKKM+AV L+C++VV  LQ S+A  +A+ EAK+++ F      + K++ C E C K C 
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATESAK-EAKYEAKF------EAKYRLCYEKCEKECL 60

Query: 61 ---NNQASCHTECETNCGKKEVADELHINV 87
             N Q+ C  +C+ +CG+KE AD+LHI V
Sbjct: 61 EKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

BLAST of CmaCh10G010830 vs. NCBI nr
Match: KAG6590401.1 (hypothetical protein SDJN03_15824, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.4 bits (381), Expect = 3.7e-33
Identity = 71/76 (93.42%), Postives = 76/76 (100.00%), Query Frame = 0

Query: 11 MCVMVVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNKGCNNQASCHTECE 70
          MCV+VVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCN+GCNNQASCHTECE
Sbjct: 1  MCVVVVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNEGCNNQASCHTECE 60

Query: 71 TNCGKKEVADELHINV 87
          T+CG+KEV+DELHINV
Sbjct: 61 TSCGRKEVSDELHINV 76

BLAST of CmaCh10G010830 vs. NCBI nr
Match: KAG6590395.1 (hypothetical protein SDJN03_15818, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.5 bits (371), Expect = 5.4e-32
Identity = 70/82 (85.37%), Postives = 78/82 (95.12%), Query Frame = 0

Query: 5  MMAVFLMCVMVVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNKGCNNQAS 64
          MM VFL+CV+VV+ L+FSTADNTA+MEA FKSFFGNLD VKEKFKSCVETCN+GCNN+AS
Sbjct: 1  MMVVFLVCVVVVSALRFSTADNTADMEANFKSFFGNLDGVKEKFKSCVETCNEGCNNKAS 60

Query: 65 CHTECETNCGKKEVADELHINV 87
          CHTECET+CGKKEVADELHINV
Sbjct: 61 CHTECETHCGKKEVADELHINV 82

BLAST of CmaCh10G010830 vs. NCBI nr
Match: KAG6590397.1 (hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.6 bits (309), Expect = 8.3e-25
Identity = 60/89 (67.42%), Postives = 72/89 (80.90%), Query Frame = 0

Query: 1  MAKKMMAVFLMCVMVVNVLQFSTAD-NTAEMEAKFKSFFGNLDNVKEKFKSCVETCNKGC 60
          MAK+MMAVFLMCV++VNVLQFSTAD  TAEMEAK KSFF +   VKEK K+C+ETCNKGC
Sbjct: 1  MAKRMMAVFLMCVLLVNVLQFSTADKTTAEMEAKMKSFFSDFGTVKEKLKTCIETCNKGC 60

Query: 61 NNQASCHTECETNCGKKEVADELHINVAH 89
               CH++C TNCGKKEVAD+ ++ + H
Sbjct: 61 KGNNKCHSDCATNCGKKEVADKYNMKMPH 89

BLAST of CmaCh10G010830 vs. NCBI nr
Match: KAG6590396.1 (hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 118.2 bits (295), Expect = 3.5e-23
Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 0

Query: 1  MAKKMMAVFLMCVMVVNVLQFSTAD-NTAEMEAKFKSFFGNLDNVKEKFKSCVETCNKGC 60
          M KKMM VFL+CV++VN+LQFSTAD  TAEMEAK KS F +   VKEK K+C+ETCNKGC
Sbjct: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60

Query: 61 NNQASCHTECETNCGKKEVADELHI 85
               CH++CETNCGKKEVAD+ +I
Sbjct: 61 KGNNKCHSDCETNCGKKEVADKFNI 85

BLAST of CmaCh10G010830 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 0

Query: 1  MAKKMMAVFLMCVMVVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNKGCN 60
          MAKKMMAV LMCV+VV+ LQFSTAD + EMEAKFKSFF +   V+ KFKSC  TC K C 
Sbjct: 1  MAKKMMAVVLMCVLVVSALQFSTADKSTEMEAKFKSFFSDFGTVEAKFKSCAATCQKKCT 60

Query: 61 NQASCHTECETNCGKKEVADELHINVAH 89
          N ASC ++C+ +CGKKEV ++  I + H
Sbjct: 61 N-ASCRSKCDADCGKKEVENKFKIKIPH 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BCS28.1e-1045.16Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5308.1e-1045.16major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
A0A0A0K9Z91.1e-0945.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1[more]
A0A0A0KDP72.4e-0946.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1[more]
A0A6J1EQ219.0e-0944.44major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354... [more]
Match NameE-valueIdentityDescription
KAG6590401.13.7e-3393.42hypothetical protein SDJN03_15824, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590395.15.4e-3285.37hypothetical protein SDJN03_15818, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590397.18.3e-2567.42hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590396.13.5e-2367.06hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595593.16.1e-2061.36hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 44..85
e-value: 2.5E-6
score: 28.9
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 46..82
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..86
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G010830.1CmaCh10G010830.1mRNA