CmaCh10G010810 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh10G010810
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionmajor pollen allergen Ole e 6-like
LocationCma_Chr10: 6990228 .. 6990834 (+)
RNA-Seq ExpressionCmaCh10G010810
SyntenyCmaCh10G010810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAATATAAAAGGTACCCAGAAAAAAAAAAAAAGTTAAATTGTTGCAAGTCAAGAAAAAAATGGCTAAGAAGATGATGGTGATGTTTTTAGTATGTGTTGTTGTGGTATCTGTACTACAATTCTCCACTGCTGACAATACAGCCGATATGGAAGCAAAATTCAAGTCGTTTTTTGGCAACTTAGATGGTGTGAAAGAAAAATTCAAGTCGTGTGTTGAAACTTGCAGCGAGGGATGCAATAACCAAGCTTCGTGTCATACTAAGTGTGAGACAAATTGTGGCAAAAAAGAAGTTGTTGGTACATTTTTCGATCTCTTTTAATAGTTCAAAAATTTATTTCAAACAAATAGGTGAACATCCATTTTTTCAAAGAAAAAAATTGATAATGTAGGGTGAAGTTTGATTTCAATCTTAAATGTTTACCATGAGTTACGTTTTTTTTTTTAATTTTTTCTAAAATTTAAATCTTTTGTATTAATTTTATTTATGTACTTTCTTTTGCAGATGAACTTCACATCAACGTGCCCGCAAGTTGATTATTGAATATAGAATGAATAATGGGTTTTGAAGAATTAATAATTTATTTAAATAAATTTTGTGAGAGG

mRNA sequence

AAAAAATATAAAAGGTACCCAGAAAAAAAAAAAAAGTTAAATTGTTGCAAGTCAAGAAAAAAATGGCTAAGAAGATGATGGTGATGTTTTTAGTATGTGTTGTTGTGGTATCTGTACTACAATTCTCCACTGCTGACAATACAGCCGATATGGAAGCAAAATTCAAGTCGTTTTTTGGCAACTTAGATGGTGTGAAAGAAAAATTCAAGTCGTGTGTTGAAACTTGCAGCGAGGGATGCAATAACCAAGCTTCGTGTCATACTAAGTGTGAGACAAATTGTGGCAAAAAAGAAGTTGTTGATGAACTTCACATCAACGTGCCCGCAAGTTGATTATTGAATATAGAATGAATAATGGGTTTTGAAGAATTAATAATTTATTTAAATAAATTTTGTGAGAGG

Coding sequence (CDS)

ATGGCTAAGAAGATGATGGTGATGTTTTTAGTATGTGTTGTTGTGGTATCTGTACTACAATTCTCCACTGCTGACAATACAGCCGATATGGAAGCAAAATTCAAGTCGTTTTTTGGCAACTTAGATGGTGTGAAAGAAAAATTCAAGTCGTGTGTTGAAACTTGCAGCGAGGGATGCAATAACCAAGCTTCGTGTCATACTAAGTGTGAGACAAATTGTGGCAAAAAAGAAGTTGTTGATGAACTTCACATCAACGTGCCCGCAAGTTGA

Protein sequence

MAKKMMVMFLVCVVVVSVLQFSTADNTADMEAKFKSFFGNLDGVKEKFKSCVETCSEGCNNQASCHTKCETNCGKKEVVDELHINVPAS
Homology
BLAST of CmaCh10G010810 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.1e-09
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0

Query: 1  MAKKMMVMFLVCVVVVSVLQFSTA---DNTADMEAKFKSFFGNLDGVKEKFKSCVETCSE 60
          MAKKM+ +FL+C+VVV+ LQF++A   D  A  EAKF + +      K  FK+C + C E
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKY------KSCFKTCEKECLE 60

Query: 61 GCNNQASCHTKCETNCGKKEVVDELHINV 87
            + Q+ C  KC+ +C +KEV D+LHI +
Sbjct: 61 NGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

BLAST of CmaCh10G010810 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.1e-09
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0

Query: 1  MAKKMMVMFLVCVVVVSVLQFSTA---DNTADMEAKFKSFFGNLDGVKEKFKSCVETCSE 60
          MAKKM+ +FL+C+VVV+ LQF++A   D  A  EAKF + +      K  FK+C + C E
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKY------KSCFKTCEKECLE 60

Query: 61 GCNNQASCHTKCETNCGKKEVVDELHINV 87
            + Q+ C  KC+ +C +KEV D+LHI +
Sbjct: 61 NGSGQSYCEVKCDEDCNEKEVADKLHIEL 83

BLAST of CmaCh10G010810 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-08
Identity = 40/94 (42.55%), Postives = 54/94 (57.45%), Query Frame = 0

Query: 1  MAKKMMVMFLVCVVVVSVLQFSTA---DNTADMEAKFKSFFGNLDGVKEKFKSCVETCSE 60
          MAKKMM +FL+C+VVV+ LQF  A   D     EAKF +          K+KSC ETC +
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDA----------KYKSCYETCEK 60

Query: 61 GC-----NNQASCHTKCETNCGKKEVVDELHINV 87
           C     N ++ C  KC+ +C +KE  D+LHI +
Sbjct: 61 ECLRNDTNGESFCEVKCDEDCSEKEAADKLHIEL 84

BLAST of CmaCh10G010810 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.6e-08
Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 0

Query: 1  MAKKMMVMFLVCVVVVSVLQFSTADNTADMEAKFKSFFGNLDGVKEKFKSCVETCSEGC- 60
          MAKKM+ + LVC+VVV+ LQ S+A  +A  EAK+++ F      + K++ C E C + C 
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATESA-KEAKYEAKF------EAKYRLCYEKCEKECL 60

Query: 61 ---NNQASCHTKCETNCGKKEVVDELHINV 87
             N Q+ C  KC+ +CG+KE  D+LHI V
Sbjct: 61 EKGNGQSFCEVKCDEDCGEKEAADKLHIKV 83

BLAST of CmaCh10G010810 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.5e-08
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0

Query: 1  MAKKMMVMFLVCVVVVSVLQFSTAD---NTADMEAKFKSFFGNLDGVKEKFKSCVETCSE 60
          MAKKMM +FL+C+VVV+ LQF+TA+     A  EAKF +          K+K+C  TC +
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDA----------KYKACFVTCEK 60

Query: 61 GCNNQAS----CHTKCETNCGKKEVVDELHIN 86
           C  + S    C  KC+ +CG KE  D+LHI+
Sbjct: 61 ECIERGSGHSYCEVKCDEDCGAKEAADKLHIH 82

BLAST of CmaCh10G010810 vs. NCBI nr
Match: KAG6590395.1 (hypothetical protein SDJN03_15818, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.8 bits (395), Expect = 8.9e-35
Identity = 75/84 (89.29%), Postives = 81/84 (96.43%), Query Frame = 0

Query: 5  MMVMFLVCVVVVSVLQFSTADNTADMEAKFKSFFGNLDGVKEKFKSCVETCSEGCNNQAS 64
          MMV+FLVCVVVVS L+FSTADNTADMEA FKSFFGNLDGVKEKFKSCVETC+EGCNN+AS
Sbjct: 1  MMVVFLVCVVVVSALRFSTADNTADMEANFKSFFGNLDGVKEKFKSCVETCNEGCNNKAS 60

Query: 65 CHTKCETNCGKKEVVDELHINVPA 89
          CHT+CET+CGKKEV DELHINVPA
Sbjct: 61 CHTECETHCGKKEVADELHINVPA 84

BLAST of CmaCh10G010810 vs. NCBI nr
Match: KAG6590401.1 (hypothetical protein SDJN03_15824, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 147.9 bits (372), Expect = 4.1e-32
Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = 0

Query: 11 VCVVVVSVLQFSTADNTADMEAKFKSFFGNLDGVKEKFKSCVETCSEGCNNQASCHTKCE 70
          +CVVVV+VLQFSTADNTA+MEAKFKSFFGNLD VKEKFKSCVETC+EGCNNQASCHT+CE
Sbjct: 1  MCVVVVNVLQFSTADNTAEMEAKFKSFFGNLDNVKEKFKSCVETCNEGCNNQASCHTECE 60

Query: 71 TNCGKKEVVDELHINVPA 89
          T+CG+KEV DELHINVPA
Sbjct: 61 TSCGRKEVSDELHINVPA 78

BLAST of CmaCh10G010810 vs. NCBI nr
Match: KAG6590396.1 (hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.5 bits (275), Expect = 7.3e-21
Identity = 52/88 (59.09%), Postives = 67/88 (76.14%), Query Frame = 0

Query: 1  MAKKMMVMFLVCVVVVSVLQFSTAD-NTADMEAKFKSFFGNLDGVKEKFKSCVETCSEGC 60
          M KKMM +FL+CV++V++LQFSTAD  TA+MEAK KS F +   VKEK K+C+ETC++GC
Sbjct: 1  MGKKMMTVFLICVLLVNILQFSTADKTTAEMEAKMKSLFSDFGTVKEKLKTCIETCNKGC 60

Query: 61 NNQASCHTKCETNCGKKEVVDELHINVP 88
               CH+ CETNCGKKEV D+ +I  P
Sbjct: 61 KGNNKCHSDCETNCGKKEVADKFNIKFP 88

BLAST of CmaCh10G010810 vs. NCBI nr
Match: KAG6590397.1 (hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20
Identity = 52/88 (59.09%), Postives = 69/88 (78.41%), Query Frame = 0

Query: 1  MAKKMMVMFLVCVVVVSVLQFSTAD-NTADMEAKFKSFFGNLDGVKEKFKSCVETCSEGC 60
          MAK+MM +FL+CV++V+VLQFSTAD  TA+MEAK KSFF +   VKEK K+C+ETC++GC
Sbjct: 1  MAKRMMAVFLMCVLLVNVLQFSTADKTTAEMEAKMKSFFSDFGTVKEKLKTCIETCNKGC 60

Query: 61 NNQASCHTKCETNCGKKEVVDELHINVP 88
               CH+ C TNCGKKEV D+ ++ +P
Sbjct: 61 KGNNKCHSDCATNCGKKEVADKYNMKMP 88

BLAST of CmaCh10G010810 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18
Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0

Query: 1  MAKKMMVMFLVCVVVVSVLQFSTADNTADMEAKFKSFFGNLDGVKEKFKSCVETCSEGCN 60
          MAKKMM + L+CV+VVS LQFSTAD + +MEAKFKSFF +   V+ KFKSC  TC + C 
Sbjct: 1  MAKKMMAVVLMCVLVVSALQFSTADKSTEMEAKFKSFFSDFGTVEAKFKSCAATCQKKCT 60

Query: 61 NQASCHTKCETNCGKKEVVDELHINVP 88
          N ASC +KC+ +CGKKEV ++  I +P
Sbjct: 61 N-ASCRSKCDADCGKKEVENKFKIKIP 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BCS24.1e-0943.82Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5304.1e-0943.82major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
A0A0A0K9Z91.5e-0842.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1[more]
A0A6J1EQ212.6e-0843.33major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354... [more]
A0A0A0KDP73.5e-0843.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6590395.18.9e-3589.29hypothetical protein SDJN03_15818, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590401.14.1e-3288.46hypothetical protein SDJN03_15824, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590396.17.3e-2159.09hypothetical protein SDJN03_15819, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6590397.11.3e-2059.09hypothetical protein SDJN03_15820, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6595593.12.0e-1858.62hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 45..86
e-value: 1.5E-6
score: 29.6
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 46..82
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..86
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G010810.1CmaCh10G010810.1mRNA