CmaCh10G010630 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh10G010630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr10: 6640728 .. 6642242 (-)
RNA-Seq ExpressionCmaCh10G010630
SyntenyCmaCh10G010630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCCAAAAGCCCCCTACTGCTGGTCGGCAATCAAGCGATGGGCGCATGTGTCGCTTCTAGCACGAATTTTGACTTAGAGGCGTTCAGTCATAATCTAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGAGATGACCAATTGTGCGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGACACTGTCATTAGTAGGGTAAAACTAACCTGTCTCACAACGGTCTAAACCTAGGTTACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATAGAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACCTTTCTGATACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCATGGTTCGTGTGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCTAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGCCCCCCGAGGTAGGCCTTGGGTCCAAAAAGGGGGGCAGTGCCCCGCTTTCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACCTCTTAAGTCATTTCACAAAGTCGTACTAGAGTCAAGCTCAATAGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCTCGTTCCCTTGGCTGTGATTTCGCTAGATAGTAGACAGGGAAAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGAATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCATTTACCCACGCTTGGTTGAATTTCTTCACTTTGACATTTAGAGCACTGGGCAGAAATCACATTGTGTTGATTGTTCGACGCCCGGGGAAGGCCCCTGAAGGAGCCGATCCAAGTTTGTCCCCTGGCCGGCACGCAGGGACCCGCTCTCACCGCGGGAGCAGCTCGAGCAGTCCACCAGCAGCCGACGGGTTCGGGACTTGGACCCCCGTGCCAAGACGTGCCTCATCTGTCAACAGGACAAAGTCGAGAAAGCCAAAGTCTCAGAACTCTTGGAACCTCTACCTGTGCCGACAATACCCTGATGAGGGGAGTGTGAGTTAACCTCCAAGGGTCTTGGATGTCTTTGATTTTTCATAGAGGTTAACCTATGAAAGGGTTTTGTGGCTAGCATGCGTGCCTTTGGAGTGGGCATGTAGACCAGGGTGTGAGCATGGATTTGTTAGTTGTGCTTGCATTCGGTAGGTGTGTGTGGGCATGATGTGCGCGTAAGAGCGATAGGGGCGTTGCTGCGTCGTGGAGCTTGGTGCACGCACGTGGGGGCGAGCACTGGCGCCCCATGA

mRNA sequence

ATGGGGGCCAAAAGCCCCCTACTGCTGGTCGGCAATCAAGCGATGGGCGCATGTGTCGCTTCTAGCACGAATTTTGACTTAGAGGCGTTCAGTCATAATCTAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGAGATGACCAATTGTGCGAATCAACGAGCACTGGGCAGAAATCACATTGTGTTGATTGTTCGACGCCCGGGGAAGGCCCCTGAAGGAGCCGATCCAAGTGTGTGTGGGCATGATGTGCGCGTAAGAGCGATAGGGGCGTTGCTGCGTCGTGGAGCTTGGTGCACGCACGTGGGGGCGAGCACTGGCGCCCCATGA

Coding sequence (CDS)

ATGGGGGCCAAAAGCCCCCTACTGCTGGTCGGCAATCAAGCGATGGGCGCATGTGTCGCTTCTAGCACGAATTTTGACTTAGAGGCGTTCAGTCATAATCTAGCGCACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGAGATGACCAATTGTGCGAATCAACGAGCACTGGGCAGAAATCACATTGTGTTGATTGTTCGACGCCCGGGGAAGGCCCCTGAAGGAGCCGATCCAAGTGTGTGTGGGCATGATGTGCGCGTAAGAGCGATAGGGGCGTTGCTGCGTCGTGGAGCTTGGTGCACGCACGTGGGGGCGAGCACTGGCGCCCCATGA

Protein sequence

MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQRALGRNHIVLIVRRPGKAPEGADPSVCGHDVRVRAIGALLRRGAWCTHVGASTGAP
Homology
BLAST of CmaCh10G010630 vs. ExPASy TrEMBL
Match: A0A2P5YNJ0 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA03425 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.2e-20
Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = 0

Query: 1   MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQRALGR 60
           +G + PLL VGN+A GACVASS + DLEAFSHN AHGSFAPLAFQPS MTNCANQR+   
Sbjct: 588 LGGQRPLLRVGNRATGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRSES- 647

Query: 61  NHIVLIVRRPGKAPEGADPS 81
                 VRRPGKAPEG  PS
Sbjct: 648 -----TVRRPGKAPEGVIPS 661

BLAST of CmaCh10G010630 vs. ExPASy TrEMBL
Match: A0A2Z7A599 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_42513 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.8e-20
Identity = 57/85 (67.06%), Postives = 62/85 (72.94%), Query Frame = 0

Query: 1   MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQRALGR 60
           +G + PLL VG +  GACVASS + DLEAFSHN AHGSFAPLAFQPS MTNCANQ  L R
Sbjct: 24  LGGRGPLLRVGKRTAGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQWFLSR 83

Query: 61  NHIV-----LIVRRPGKAPEGADPS 81
             +V       VRRPGKAPEGA PS
Sbjct: 84  IPLVRTSSESTVRRPGKAPEGAVPS 108

BLAST of CmaCh10G010630 vs. ExPASy TrEMBL
Match: A0A2G2V447 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_32627 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.1e-17
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 1   MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQR--AL 60
           +GA++P    G +  GAC+ SS N DLEAFSHN AHGSFAPLAFQPS MTNC NQR   L
Sbjct: 107 LGAEAP--TAGKRTAGACITSSPNSDLEAFSHNPAHGSFAPLAFQPSAMTNCVNQRRTPL 166

Query: 61  GRNHIVLIVRRPGKAPEGADPS 81
            R    L VRR GKAPEG  PS
Sbjct: 167 VRTSSELAVRRAGKAPEGTVPS 186

BLAST of CmaCh10G010630 vs. ExPASy TrEMBL
Match: A0A2G2UYK6 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34544 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.9e-16
Identity = 52/77 (67.53%), Postives = 54/77 (70.13%), Query Frame = 0

Query: 6   PLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQ--RALGRNHI 65
           PLL VG +  GACVASS + DLEAFSHN AHGSFA LAFQPS MTNC NQ    L R   
Sbjct: 75  PLLRVGKRTAGACVASSPDSDLEAFSHNPAHGSFAQLAFQPSAMTNCVNQCRIPLVRTSS 134

Query: 66  VLIVRRPGKAPEGADPS 81
            L VRR GKAPEG  PS
Sbjct: 135 ELAVRRAGKAPEGTVPS 151

BLAST of CmaCh10G010630 vs. ExPASy TrEMBL
Match: A0A2P5XL80 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16572 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.3e-16
Identity = 48/73 (65.75%), Postives = 52/73 (71.23%), Query Frame = 0

Query: 1   MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQRALGR 60
           +G + PLL VGN+A GACVASS + DLEAFSHN AHGSFAPLAFQPS MTNCANQ   G 
Sbjct: 211 LGGQRPLLRVGNRATGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQXITGM 270

Query: 61  NHIVLIVRRPGKA 74
           N         GKA
Sbjct: 271 NRRSTTGNLTGKA 283

BLAST of CmaCh10G010630 vs. NCBI nr
Match: KAF7112644.1 (hypothetical protein RHSIM_RhsimUnG0208400 [Rhododendron simsii])

HSP 1 Score: 108.6 bits (270), Expect = 3.5e-20
Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 0

Query: 1  MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQRALGR 60
          +GAK PLLLVG +A GAC+ASS + DLEAFSHN AHGSFAPLAFQPS MTNCANQR+   
Sbjct: 22 LGAKWPLLLVGKRAAGACIASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRS--- 81

Query: 61 NHIVLIVRRPGKAPEGADPS 81
              L VRRPGKAP  A PS
Sbjct: 82 ---ELTVRRPGKAPRRAVPS 95

BLAST of CmaCh10G010630 vs. NCBI nr
Match: PPS17156.1 (hypothetical protein GOBAR_AA03425 [Gossypium barbadense])

HSP 1 Score: 108.2 bits (269), Expect = 4.5e-20
Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = 0

Query: 1   MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQRALGR 60
           +G + PLL VGN+A GACVASS + DLEAFSHN AHGSFAPLAFQPS MTNCANQR+   
Sbjct: 588 LGGQRPLLRVGNRATGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQRSES- 647

Query: 61  NHIVLIVRRPGKAPEGADPS 81
                 VRRPGKAPEG  PS
Sbjct: 648 -----TVRRPGKAPEGVIPS 661

BLAST of CmaCh10G010630 vs. NCBI nr
Match: KZV16704.1 (hypothetical protein F511_42513 [Dorcoceras hygrometricum])

HSP 1 Score: 107.5 bits (267), Expect = 7.8e-20
Identity = 57/85 (67.06%), Postives = 62/85 (72.94%), Query Frame = 0

Query: 1   MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQRALGR 60
           +G + PLL VG +  GACVASS + DLEAFSHN AHGSFAPLAFQPS MTNCANQ  L R
Sbjct: 24  LGGRGPLLRVGKRTAGACVASSPDSDLEAFSHNPAHGSFAPLAFQPSAMTNCANQWFLSR 83

Query: 61  NHIV-----LIVRRPGKAPEGADPS 81
             +V       VRRPGKAPEGA PS
Sbjct: 84  IPLVRTSSESTVRRPGKAPEGAVPS 108

BLAST of CmaCh10G010630 vs. NCBI nr
Match: PHT27763.1 (hypothetical protein CQW23_32627 [Capsicum baccatum])

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16
Identity = 52/82 (63.41%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 1   MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQR--AL 60
           +GA++P    G +  GAC+ SS N DLEAFSHN AHGSFAPLAFQPS MTNC NQR   L
Sbjct: 107 LGAEAP--TAGKRTAGACITSSPNSDLEAFSHNPAHGSFAPLAFQPSAMTNCVNQRRTPL 166

Query: 61  GRNHIVLIVRRPGKAPEGADPS 81
            R    L VRR GKAPEG  PS
Sbjct: 167 VRTSSELAVRRAGKAPEGTVPS 186

BLAST of CmaCh10G010630 vs. NCBI nr
Match: KAG5548558.1 (hypothetical protein RHGRI_014046 [Rhododendron griersonianum])

HSP 1 Score: 95.9 bits (237), Expect = 2.3e-16
Identity = 47/58 (81.03%), Postives = 50/58 (86.21%), Query Frame = 0

Query: 1   MGAKSPLLLVGNQAMGACVASSTNFDLEAFSHNLAHGSFAPLAFQPSEMTNCANQRAL 59
           +GAK PLLLV  QA+G C+ASS N DLEAFSHNLAHGSFAPLAFQPS MTNCANQR L
Sbjct: 54  LGAKWPLLLVLKQAVGVCIASSPNSDLEAFSHNLAHGSFAPLAFQPSAMTNCANQRFL 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5YNJ02.2e-2070.00Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA03425 PE=4 SV... [more]
A0A2Z7A5993.8e-2067.06Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_42513 PE=4... [more]
A0A2G2V4475.1e-1763.41Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_32627 PE=4 SV=1[more]
A0A2G2UYK61.9e-1667.53Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_34544 PE=4 SV=1[more]
A0A2P5XL804.3e-1665.75Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16572 PE=4 SV... [more]
Match NameE-valueIdentityDescription
KAF7112644.13.5e-2071.25hypothetical protein RHSIM_RhsimUnG0208400 [Rhododendron simsii][more]
PPS17156.14.5e-2070.00hypothetical protein GOBAR_AA03425 [Gossypium barbadense][more]
KZV16704.17.8e-2067.06hypothetical protein F511_42513 [Dorcoceras hygrometricum][more]
PHT27763.11.0e-1663.41hypothetical protein CQW23_32627 [Capsicum baccatum][more]
KAG5548558.12.3e-1681.03hypothetical protein RHGRI_014046 [Rhododendron griersonianum][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G010630.1CmaCh10G010630.1mRNA