CmaCh10G010540 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G010540
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	late embryogenesis abundant protein D-34-like
Location	Cma_Chr10: 6513120 .. 6514604 (-)
RNA-Seq Expression	CmaCh10G010540
Synteny	CmaCh10G010540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCAACAACAGCCAAGAAGACCCGCCAGTGATCACCCGGAGCCGATCAAGTACGGCGACGTTTTTCCTGTTCACGGTGACCTTGCTCAGAAGCCGATCACGCCCGAGGATGCTGCGGCCCTGCAGGCCACTGATACCGCCCTCCTCGGCAAGACCGTCAAGGGCGGTGCTGCTGCGCTGATTCAATCTGCTGCTGCCAAAAATGAGATGGCTGGCCTTTTGGATCACGGCGGTGGCGATGGTGGTAATGGGTTGATGCCGACGAGGTAAGCATTACCCAGAGGGAGATGCCCGGGAGGAAGGTTATTACAGAGTCAGTTGGTGGACAGGTTATTATTTATTATTATTGAAACTTTTATACAAGTGTACATTGATTCCGACAATCTGTAACTACTCAATTTGAGTTAAAAATCGAATTGACTCTGTTCGTGACTCGGTTTGGTTTCAGGTTGGGTTGGGTTAATTATCCTGAAACCGAATTGACTCGGTTCGGTTCCAGGTTGGGTTCGGTTGGGGTTAATTTTTCTGAAACCGAATTGACTCGGTTCAGTTTCAAGTTGGGTTCGGGTGGGGTTAATTTTTCTGAAACCGAATAGACTTGATTCAATTCCAAGTTGGGTTCGGGTGGGGTTAATTTTTCTAATTTTTCTGAAACCGAATTGACTCAGTTTGGTTCCAGGTTGGGTTGGCATAATTTTTTTGAAATCGAATGGACTTGGTTTGGTTGGGTTTGAGTTAGTTTCATTTTTTCTGAAACTAAATTAACTCATTTAGTTTTGAGTTGGGTTAATTTTTCTGAAACCGAATTCACTTGGTTTGGTGACTTGATTCATTTTCTGGTGAGGTAGGTGACTTGATTCATTTTCTGGTGAGGTAGGCTTAAGTTATTTTTTTTTGAAATTGAATTGACTCGGTTCGAGTTCGGGTTCAGTTTCAGGTTGAGTTGGGTTAATTTTTCTGAAACTCAATTTACTCGGTTCAGTTTCAAGTTGGTTTGGGTTAATTTTTCGAAAACCGATTTGGGTTCGGGTTAATTTTTGAGAAACCTAAGAAACCAAATTTACTTGGTGTTGAGTTCAGAGGTCAAAATTCTATGAATCCAAATCCAACAAAAACTTGTATTTAAGTTTAGCATTTGGATTCCCCTAAGATTCCCCCAAATTAAATGGGATAAAATTCATTTTTGTCAATTTAATATCATTTAATTTTGACAATAAATAAAAGGTTGTGACGCAACACAGCGAGAGGGTTCCTATAGCGCCATTATCGACCATGAATCCACGGGAAGACGTTGGAGGAGGAGGAATCACGATCGGTGAAGCATTGGAAGCAACCGCTATAGCGGTGGGGCAGAAGCCAGTGGAATGGAGTGATGCTGCCGCAATCCAGGCGGCGGAGGCCAGGGCAACTGGCCAGATGAATATAGCTCCGGGAAGTGTCGCCGCCATCGCCCAATCAGCGCCACCACGAACGCTCGATTAA

mRNA sequence

ATGAGCCAACAACAGCCAAGAAGACCCGCCAGTGATCACCCGGAGCCGATCAAGTACGGCGACGTTTTTCCTGTTCACGGTGACCTTGCTCAGAAGCCGATCACGCCCGAGGATGCTGCGGCCCTGCAGGCCACTGATACCGCCCTCCTCGGCAAGACCGTCAAGGGCGGTGCTGCTGCGCTGATTCAATCTGCTGCTGCCAAAAATGAGATGGCTGGCCTTTTGGATCACGGCGGTGGCGATGGTGAGTCAGTTGGTGGACAGGTTGTGACGCAACACAGCGAGAGGGTTCCTATAGCGCCATTATCGACCATGAATCCACGGGAAGACGTTGGAGGAGGAGGAATCACGATCGGTGAAGCATTGGAAGCAACCGCTATAGCGGTGGGGCAGAAGCCAGTGGAATGGAGTGATGCTGCCGCAATCCAGGCGGCGGAGGCCAGGGCAACTGGCCAGATGAATATAGCTCCGGGAAGTGTCGCCGCCATCGCCCAATCAGCGCCACCACGAACGCTCGATTAA

Coding sequence (CDS)

ATGAGCCAACAACAGCCAAGAAGACCCGCCAGTGATCACCCGGAGCCGATCAAGTACGGCGACGTTTTTCCTGTTCACGGTGACCTTGCTCAGAAGCCGATCACGCCCGAGGATGCTGCGGCCCTGCAGGCCACTGATACCGCCCTCCTCGGCAAGACCGTCAAGGGCGGTGCTGCTGCGCTGATTCAATCTGCTGCTGCCAAAAATGAGATGGCTGGCCTTTTGGATCACGGCGGTGGCGATGGTGAGTCAGTTGGTGGACAGGTTGTGACGCAACACAGCGAGAGGGTTCCTATAGCGCCATTATCGACCATGAATCCACGGGAAGACGTTGGAGGAGGAGGAATCACGATCGGTGAAGCATTGGAAGCAACCGCTATAGCGGTGGGGCAGAAGCCAGTGGAATGGAGTGATGCTGCCGCAATCCAGGCGGCGGAGGCCAGGGCAACTGGCCAGATGAATATAGCTCCGGGAAGTGTCGCCGCCATCGCCCAATCAGCGCCACCACGAACGCTCGATTAA

Protein sequence

MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAALIQSAAAKNEMAGLLDHGGGDGESVGGQVVTQHSERVPIAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVAAIAQSAPPRTLD

Homology

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BLAST of CmaCh10G010540 vs. ExPASy Swiss-Prot
Match: P09444 (Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.9e-32
Identity = 93/193 (48.19%), Postives = 114/193 (59.07%), Query Frame = 0


Query: 1   MSQQQPRRP-----ASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVK 60
           MSQ QPRRP       ++ EPIKYGDVF V G+LA KPI P+DAA +Q  +T +LG+T K
Sbjct: 1   MSQGQPRRPQQPAGQGENQEPIKYGDVFNVSGELANKPIAPQDAAMMQTAETQVLGQTQK 60

Query: 61  GGAAALIQSAAAKNEMAGLLDH------GGGDG---------------ESVGGQVVTQHS 120
           GG AA++Q+AA +NE  G++ H       G  G               E+V GQVV Q+ 
Sbjct: 61  GGTAAVMQAAATRNEQVGVVGHNDITDIAGEQGVTLAETDVAGRRIITEAVAGQVVGQYV 120

Query: 121 ERVPIAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMN 168
           +  P+           V    ITIGEALEATA   G KPV+ SDAAA+QAAE RATG   
Sbjct: 121 QATPVMTSQV----GVVLQNAITIGEALEATAKTAGDKPVDQSDAAAVQAAEVRATGSNV 180

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BLAST of CmaCh10G010540 vs. ExPASy Swiss-Prot
Match: Q9LJ97 (Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana OX=3702 GN=RAB28 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-30
Identity = 92/189 (48.68%), Postives = 109/189 (57.67%), Query Frame = 0


Query: 3   QQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAALI 62
           ++QP+RP     EP+ YGDVF V G+LA KPI PEDA  +QA +T + G T KGGAAA++
Sbjct: 4   EEQPKRP----QEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAAVM 63

Query: 63  QSAAAKNEMAGLLDHGGGDG---------------------ESVGGQVVTQHSERVPIAP 122
           QSAA  N+  G +  G                         E VGGQVV Q+ E  P+A 
Sbjct: 64  QSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPVAT 123

Query: 123 LSTMNPREDVG---GGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPG 168
            + M   E VG      ITIGEALEAT    G KPV+ SDAAAIQAAE RA G   IAPG
Sbjct: 124 AAAME-AEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNVIAPG 183

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BLAST of CmaCh10G010540 vs. ExPASy Swiss-Prot
Match: Q9LJ95 (Late embryogenesis abundant protein 32 OS=Arabidopsis thaliana OX=3702 GN=ECP31 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 92/187 (49.20%), Postives = 107/187 (57.22%), Query Frame = 0


Query: 1   MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAA 60
           MSQ+QPRRP     EP+KYGDVF V G+LA KPI PEDA  +Q+ +T + G T KGG AA
Sbjct: 1   MSQEQPRRPR----EPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGPAA 60

Query: 61  LIQSAAAKNEMAG---------LLDHGGGDGES-----------VGGQVVTQHSERVPIA 120
           ++QSAA  N   G         L+   G   E            VGGQVV QH E  P  
Sbjct: 61  VMQSAATTNIRGGFVHPDDKTELVAERGATVEQTVPAATVTTEFVGGQVVGQHVE--PRR 120

Query: 121 PLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSV 168
            ++     E+     ITIGEALEAT    G KPV+ SDAAAIQAAE RA+G   IA   V
Sbjct: 121 VVAAARTDEEALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASGTNVIALAGV 180

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BLAST of CmaCh10G010540 vs. ExPASy Swiss-Prot
Match: Q8GWT7 (Late embryogenesis abundant protein 47 OS=Arabidopsis thaliana OX=3702 GN=At5g27980 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12
Identity = 51/102 (50.00%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 66  AAKNEMAGLLDHGGGDGESVGGQVVTQHSERVPIAPLSTMNPREDVGGGGITIGEALEAT 125
           AA+++  G++      GE   G+V   + ++V   PL +         G ITIGEALEA 
Sbjct: 31  AAEDKEKGVV--AEASGEQAEGEV---NQKKVVANPLKS--------EGTITIGEALEAA 90

Query: 126 AIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVAAIAQSA 168
            +  G KPVEWSDAAAIQAAE RATG+ NI PG VAA AQSA
Sbjct: 91  VLTAGNKPVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSA 119

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BLAST of CmaCh10G010540 vs. ExPASy Swiss-Prot
Match: Q9SA57 (Late embryogenesis abundant protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g03120 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-08
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 116 ITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVAAIAQSA 168
           +TIGEALEATA+++G KPV+  DAAAIQAAE RATG+    PG +A  AQ+A
Sbjct: 58  VTIGEALEATALSLGDKPVDRRDAAAIQAAETRATGESKGRPGGLAVAAQAA 109

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BLAST of CmaCh10G010540 vs. ExPASy TrEMBL
Match: A0A6J1EY17 (late embryogenesis abundant protein D-34-like OS=Cucurbita moschata OX=3662 GN=LOC111439748 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.1e-74
Identity = 159/189 (84.13%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 1   MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAA 60
           MSQQQPRRPA DHPEPIKYGDVFPVHGDLAQKPITPEDAAALQAT+TALLGKTVKGGAAA
Sbjct: 1   MSQQQPRRPAGDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATETALLGKTVKGGAAA 60

Query: 61  LIQSAAAKNEMAGLLDHGGGDG----------------------ESVGGQVVTQHSERVP 120
           LIQSAAAKNEMAGLLDHGGGDG                      ESVGGQVVTQHS+RVP
Sbjct: 61  LIQSAAAKNEMAGLLDHGGGDGGNVDADEVSITQREMPGRRVITESVGGQVVTQHSQRVP 120

Query: 121 IAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPG 168
           IAPLSTMNP E+ GGGGITIGEALEATAIAVGQKPVEWSDAAAIQ AEARATG+MNIAPG
Sbjct: 121 IAPLSTMNPLEE-GGGGITIGEALEATAIAVGQKPVEWSDAAAIQVAEARATGRMNIAPG 180

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BLAST of CmaCh10G010540 vs. ExPASy TrEMBL
Match: A0A5D3CF52 (Late embryogenesis abundant protein 47 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003100 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.9e-55
Identity = 134/186 (72.04%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 1   MSQQQPRRPA-SDHP-EPIKYGDVFP-VHGDLAQKPITPEDAAALQATDTALLGKTVKGG 60
           MSQQQPRRPA  D P EPIKYGDVFP V GDLA KP+TPEDAAALQA +TALLGKT+ GG
Sbjct: 1   MSQQQPRRPACCDQPEEPIKYGDVFPHVEGDLAHKPVTPEDAAALQAAETALLGKTLHGG 60

Query: 61  AAALIQSAAAKNEMAGLLDHGGGDGE---------------SVGGQVVTQ-HSERVPIAP 120
           AAA IQSAAAKNE AGL+D G   G+                VG QVVT+ HSERVPI P
Sbjct: 61  AAAAIQSAAAKNERAGLVDRGNDVGDIVADDVSMNAKRVTNLVGAQVVTELHSERVPIGP 120

Query: 121 LSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVA 168
           LST+NP ++ GGGGITIGEALEATA+AVG+KPVEWSDAAAIQAAE RATG+MNIAPG +A
Sbjct: 121 LSTLNPHKE-GGGGITIGEALEATALAVGEKPVEWSDAAAIQAAEVRATGRMNIAPGGIA 180

[Close]

BLAST of CmaCh10G010540 vs. ExPASy TrEMBL
Match: A0A1S3BPX1 (late embryogenesis abundant protein 47 OS=Cucumis melo OX=3656 GN=LOC103492246 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.9e-55
Identity = 134/186 (72.04%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 1   MSQQQPRRPA-SDHP-EPIKYGDVFP-VHGDLAQKPITPEDAAALQATDTALLGKTVKGG 60
           MSQQQPRRPA  D P EPIKYGDVFP V GDLA KP+TPEDAAALQA +TALLGKT+ GG
Sbjct: 1   MSQQQPRRPACCDQPEEPIKYGDVFPHVEGDLAHKPVTPEDAAALQAAETALLGKTLHGG 60

Query: 61  AAALIQSAAAKNEMAGLLDHGGGDGE---------------SVGGQVVTQ-HSERVPIAP 120
           AAA IQSAAAKNE AGL+D G   G+                VG QVVT+ HSERVPI P
Sbjct: 61  AAAAIQSAAAKNERAGLVDRGNDVGDIVADDVSMNAKRVTNLVGAQVVTELHSERVPIGP 120

Query: 121 LSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVA 168
           LST+NP ++ GGGGITIGEALEATA+AVG+KPVEWSDAAAIQAAE RATG+MNIAPG +A
Sbjct: 121 LSTLNPHKE-GGGGITIGEALEATALAVGEKPVEWSDAAAIQAAEVRATGRMNIAPGGIA 180

[Close]

BLAST of CmaCh10G010540 vs. ExPASy TrEMBL
Match: A0A0A0M1P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G574780 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.6e-52
Identity = 127/183 (69.40%), Postives = 140/183 (76.50%), Query Frame = 0


Query: 1   MSQQQPRRPA--SDHPEPIKYGDVFP-VHGDLAQKPITPEDAAALQATDTALLGKTVKGG 60
           MSQQQPR+PA      EPIKYGDVFP V GDLA KP+TPEDAAALQA +T LLGKT+ GG
Sbjct: 1   MSQQQPRKPACCDQLEEPIKYGDVFPHVEGDLANKPVTPEDAAALQAAETVLLGKTLHGG 60

Query: 61  AAALIQSAAAKNEMAGLLDHGGGDGES------------VGGQ-VVTQHSERVPIAPLST 120
           AAA IQSAAAKNE AGL+  G   G+             VG Q VVT+H ERVPI PLST
Sbjct: 61  AAATIQSAAAKNERAGLVGRGKDVGDQIVAEDVITNTDLVGAQEVVTEHRERVPIGPLST 120

Query: 121 MNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVAAIA 168
           +NP E+ GGGGITIGEALEATA+ VG+K VEWSDAAAIQAAE RATG+MNIAPG +AA A
Sbjct: 121 LNPHEE-GGGGITIGEALEATALTVGEKIVEWSDAAAIQAAEVRATGRMNIAPGGIAATA 180

[Close]

BLAST of CmaCh10G010540 vs. ExPASy TrEMBL
Match: A0A223FWK6 (Late embryogenisis abundant protein 10 OS=Betula platyphylla OX=78630 GN=LEA10 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.3e-39
Identity = 104/188 (55.32%), Postives = 128/188 (68.09%), Query Frame = 0


Query: 1   MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAA 60
           MSQ+Q +RP     E IKYGDVF V G+LA+K +TP DAA +Q  + A+LG T KGGAA+
Sbjct: 1   MSQEQCQRP---QQEAIKYGDVFTVQGELAEKTVTPRDAAMMQTAENAMLGHTQKGGAAS 60

Query: 61  LIQSAAAKNEMAGLLDH-----GGGDG----------------ESVGGQVVTQHSERVPI 120
            +QSAA +N  AGL+DH       GD                 ESVGGQVV ++S+R+P+
Sbjct: 61  AMQSAAMRNVRAGLVDHNDMSDNAGDSGVSITATDLPGSRIIVESVGGQVVDEYSQRLPL 120

Query: 121 APLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGS 168
           AP STM   ++V GG ITIGEAL+ATA+  GQKPV+ SDAAAIQAAE RATG+ N+ PG 
Sbjct: 121 APPSTM--EQEVSGGAITIGEALQATALTAGQKPVDRSDAAAIQAAEVRATGRTNVLPGG 180

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BLAST of CmaCh10G010540 vs. NCBI nr
Match: XP_023516606.1 (late embryogenesis abundant protein D-34-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.3 bits (765), Expect = 2.2e-77
Identity = 163/189 (86.24%), Postives = 166/189 (87.83%), Query Frame = 0


Query: 1   MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAA 60
           MSQQQPRRPA DHPEPIKYGD+FPVHGDLAQKPITPEDAAALQAT+TALLGKTVKGGAAA
Sbjct: 1   MSQQQPRRPAGDHPEPIKYGDLFPVHGDLAQKPITPEDAAALQATETALLGKTVKGGAAA 60

Query: 61  LIQSAAAKNEMAGLLDHGGGDG----------------------ESVGGQVVTQHSERVP 120
           LIQSAAAKNEMAGLLDHGGGDG                      ESVGGQVVTQHSERVP
Sbjct: 61  LIQSAAAKNEMAGLLDHGGGDGGNVDADEVSITQREMPGRKVITESVGGQVVTQHSERVP 120

Query: 121 IAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPG 168
           IAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATG+MNIAPG
Sbjct: 121 IAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGRMNIAPG 180

[Close]

BLAST of CmaCh10G010540 vs. NCBI nr
Match: KAG6590337.1 (Late embryogenesis abundant protein 31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.0 bits (741), Expect = 1.3e-74
Identity = 161/189 (85.19%), Postives = 164/189 (86.77%), Query Frame = 0


Query: 1   MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAA 60
           MSQQQPRRPA DHPEPIKYGDVFPVHGDLAQKPITPEDAAALQAT+TALLGKTVKGGAAA
Sbjct: 1   MSQQQPRRPAGDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATETALLGKTVKGGAAA 60

Query: 61  LIQSAAAKNEMAGLLDHGGGDG----------------------ESVGGQVVTQHSERVP 120
           LIQSAAAKNEMAGLLDHGGGDG                      ESVGGQVVTQHSERVP
Sbjct: 61  LIQSAAAKNEMAGLLDHGGGDGGNVDANEVSITQREMPGRRVITESVGGQVVTQHSERVP 120

Query: 121 IAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPG 168
           IAPLSTMNP E+ GGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATG+MNIAPG
Sbjct: 121 IAPLSTMNPLEE-GGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGRMNIAPG 180

[Close]

BLAST of CmaCh10G010540 vs. NCBI nr
Match: KAG7023924.1 (Late embryogenesis abundant protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288.5 bits (737), Expect = 3.8e-74
Identity = 160/189 (84.66%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 1   MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAA 60
           MSQQQPRRPA DHPEPIKYGDVFPVHGDLAQKPITPEDAAALQAT+TALLGKTVKGGAAA
Sbjct: 1   MSQQQPRRPAGDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATETALLGKTVKGGAAA 60

Query: 61  LIQSAAAKNEMAGLLDHGGGDG----------------------ESVGGQVVTQHSERVP 120
           LIQSAAAKNEMAGLLDHGGGDG                      ESVGGQVVTQHSERVP
Sbjct: 61  LIQSAAAKNEMAGLLDHGGGDGGNVDANEVSITQREMPGRRVITESVGGQVVTQHSERVP 120

Query: 121 IAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPG 168
           IAPLSTMNP E+ GGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATG+MNIAPG
Sbjct: 121 IAPLSTMNPLEE-GGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGRMNIAPG 180

[Close]

BLAST of CmaCh10G010540 vs. NCBI nr
Match: XP_022933046.1 (late embryogenesis abundant protein D-34-like [Cucurbita moschata])

HSP 1 Score: 287.3 bits (734), Expect = 8.5e-74
Identity = 159/189 (84.13%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 1   MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAA 60
           MSQQQPRRPA DHPEPIKYGDVFPVHGDLAQKPITPEDAAALQAT+TALLGKTVKGGAAA
Sbjct: 1   MSQQQPRRPAGDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATETALLGKTVKGGAAA 60

Query: 61  LIQSAAAKNEMAGLLDHGGGDG----------------------ESVGGQVVTQHSERVP 120
           LIQSAAAKNEMAGLLDHGGGDG                      ESVGGQVVTQHS+RVP
Sbjct: 61  LIQSAAAKNEMAGLLDHGGGDGGNVDADEVSITQREMPGRRVITESVGGQVVTQHSQRVP 120

Query: 121 IAPLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPG 168
           IAPLSTMNP E+ GGGGITIGEALEATAIAVGQKPVEWSDAAAIQ AEARATG+MNIAPG
Sbjct: 121 IAPLSTMNPLEE-GGGGITIGEALEATAIAVGQKPVEWSDAAAIQVAEARATGRMNIAPG 180

[Close]

BLAST of CmaCh10G010540 vs. NCBI nr
Match: XP_008450758.2 (PREDICTED: late embryogenesis abundant protein 47 [Cucumis melo] >TYK10165.1 late embryogenesis abundant protein 47 [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 4.0e-55
Identity = 134/186 (72.04%), Postives = 147/186 (79.03%), Query Frame = 0


Query: 1   MSQQQPRRPA-SDHP-EPIKYGDVFP-VHGDLAQKPITPEDAAALQATDTALLGKTVKGG 60
           MSQQQPRRPA  D P EPIKYGDVFP V GDLA KP+TPEDAAALQA +TALLGKT+ GG
Sbjct: 1   MSQQQPRRPACCDQPEEPIKYGDVFPHVEGDLAHKPVTPEDAAALQAAETALLGKTLHGG 60

Query: 61  AAALIQSAAAKNEMAGLLDHGGGDGE---------------SVGGQVVTQ-HSERVPIAP 120
           AAA IQSAAAKNE AGL+D G   G+                VG QVVT+ HSERVPI P
Sbjct: 61  AAAAIQSAAAKNERAGLVDRGNDVGDIVADDVSMNAKRVTNLVGAQVVTELHSERVPIGP 120

Query: 121 LSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVA 168
           LST+NP ++ GGGGITIGEALEATA+AVG+KPVEWSDAAAIQAAE RATG+MNIAPG +A
Sbjct: 121 LSTLNPHKE-GGGGITIGEALEATALAVGEKPVEWSDAAAIQAAEVRATGRMNIAPGGIA 180

[Close]

BLAST of CmaCh10G010540 vs. TAIR 10
Match: AT3G22490.1 (Seed maturation protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-31
Identity = 92/189 (48.68%), Postives = 109/189 (57.67%), Query Frame = 0


Query: 3   QQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAALI 62
           ++QP+RP     EP+ YGDVF V G+LA KPI PEDA  +QA +T + G T KGGAAA++
Sbjct: 4   EEQPKRP----QEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAAVM 63

Query: 63  QSAAAKNEMAGLLDHGGGDG---------------------ESVGGQVVTQHSERVPIAP 122
           QSAA  N+  G +  G                         E VGGQVV Q+ E  P+A 
Sbjct: 64  QSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPVAT 123

Query: 123 LSTMNPREDVG---GGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPG 168
            + M   E VG      ITIGEALEAT    G KPV+ SDAAAIQAAE RA G   IAPG
Sbjct: 124 AAAME-AEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNVIAPG 183

[Close]

BLAST of CmaCh10G010540 vs. TAIR 10
Match: AT3G22500.1 (Seed maturation protein )

HSP 1 Score: 127.9 bits (320), Expect = 8.0e-30
Identity = 92/187 (49.20%), Postives = 107/187 (57.22%), Query Frame = 0


Query: 1   MSQQQPRRPASDHPEPIKYGDVFPVHGDLAQKPITPEDAAALQATDTALLGKTVKGGAAA 60
           MSQ+QPRRP     EP+KYGDVF V G+LA KPI PEDA  +Q+ +T + G T KGG AA
Sbjct: 1   MSQEQPRRPR----EPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGPAA 60

Query: 61  LIQSAAAKNEMAG---------LLDHGGGDGES-----------VGGQVVTQHSERVPIA 120
           ++QSAA  N   G         L+   G   E            VGGQVV QH E  P  
Sbjct: 61  VMQSAATTNIRGGFVHPDDKTELVAERGATVEQTVPAATVTTEFVGGQVVGQHVE--PRR 120

Query: 121 PLSTMNPREDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSV 168
            ++     E+     ITIGEALEAT    G KPV+ SDAAAIQAAE RA+G   IA   V
Sbjct: 121 VVAAARTDEEALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASGTNVIALAGV 180

[Close]

BLAST of CmaCh10G010540 vs. TAIR 10
Match: AT5G27980.1 (Seed maturation protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 51/102 (50.00%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 66  AAKNEMAGLLDHGGGDGESVGGQVVTQHSERVPIAPLSTMNPREDVGGGGITIGEALEAT 125
           AA+++  G++      GE   G+V   + ++V   PL +         G ITIGEALEA 
Sbjct: 31  AAEDKEKGVV--AEASGEQAEGEV---NQKKVVANPLKS--------EGTITIGEALEAA 90

Query: 126 AIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVAAIAQSA 168
            +  G KPVEWSDAAAIQAAE RATG+ NI PG VAA AQSA
Sbjct: 91  VLTAGNKPVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSA 119

[Close]

BLAST of CmaCh10G010540 vs. TAIR 10
Match: AT1G03120.1 (responsive to abscisic acid 28 )

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 116 ITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVAAIAQSA 168
           +TIGEALEATA+++G KPV+  DAAAIQAAE RATG+    PG +A  AQ+A
Sbjct: 58  VTIGEALEATALSLGDKPVDRRDAAAIQAAETRATGESKGRPGGLAVAAQAA 109

[Close]

BLAST of CmaCh10G010540 vs. TAIR 10
Match: AT5G53270.1 (Seed maturation protein )

HSP 1 Score: 44.7 bits (104), Expect = 9.0e-05
Identity = 30/62 (48.39%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 109 EDVGGGGITIGEALEATAIAVGQKPVEWSDAAAIQAAEARATGQMNIAPGSVAAIAQSAP 168
           E + G   T+ EAL+A AI VG+KPVE +D AAI+  EARA G    + G V A+A  A 
Sbjct: 23  EALVGRSTTLTEALKAAAINVGRKPVETTDLAAIKEVEARAIGGDIESDGGVTAVASKAV 82

Query: 169 PR 171
            R
Sbjct: 83  AR 84

The following BLAST results are available for this feature:

BLAST of CmaCh10G010540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P09444	2.9e-32	48.19	Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum OX=3635 PE=3 SV=1	[more]
Q9LJ97	4.6e-30	48.68	Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana OX=3702 GN=RAB28 ...	[more]
Q9LJ95	1.1e-28	49.20	Late embryogenesis abundant protein 32 OS=Arabidopsis thaliana OX=3702 GN=ECP31 ...	[more]
Q8GWT7	1.5e-12	50.00	Late embryogenesis abundant protein 47 OS=Arabidopsis thaliana OX=3702 GN=At5g27...	[more]
Q9SA57	1.7e-08	63.46	Late embryogenesis abundant protein 3 OS=Arabidopsis thaliana OX=3702 GN=At1g031...	[more]

BLAST of CmaCh10G010540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EY17	4.1e-74	84.13	late embryogenesis abundant protein D-34-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3CF52	1.9e-55	72.04	Late embryogenesis abundant protein 47 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BPX1	1.9e-55	72.04	late embryogenesis abundant protein 47 OS=Cucumis melo OX=3656 GN=LOC103492246 P...	[more]
A0A0A0M1P9	7.6e-52	69.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G574780 PE=3 SV=1	[more]
A0A223FWK6	3.3e-39	55.32	Late embryogenisis abundant protein 10 OS=Betula platyphylla OX=78630 GN=LEA10 P...	[more]

BLAST of CmaCh10G010540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516606.1	2.2e-77	86.24	late embryogenesis abundant protein D-34-like [Cucurbita pepo subsp. pepo]	[more]
KAG6590337.1	1.3e-74	85.19	Late embryogenesis abundant protein 31, partial [Cucurbita argyrosperma subsp. s...	[more]
KAG7023924.1	3.8e-74	84.66	Late embryogenesis abundant protein 31, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022933046.1	8.5e-74	84.13	late embryogenesis abundant protein D-34-like [Cucurbita moschata]	[more]
XP_008450758.2	4.0e-55	72.04	PREDICTED: late embryogenesis abundant protein 47 [Cucumis melo] >TYK10165.1 lat...	[more]

BLAST of CmaCh10G010540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22490.1	3.3e-31	48.68	Seed maturation protein	[more]
AT3G22500.1	8.0e-30	49.20	Seed maturation protein	[more]
AT5G27980.1	1.1e-13	50.00	Seed maturation protein	[more]
AT1G03120.1	1.2e-09	63.46	responsive to abscisic acid 28	[more]
AT5G53270.1	9.0e-05	48.39	Seed maturation protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007011	Late embryogenesis abundant protein, SMP subgroup domain	PFAM	PF04927	SMP	coord: 116..167 e-value: 1.3E-17 score: 64.0 coord: 17..70 e-value: 3.8E-14 score: 52.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
IPR042971	Late embryogenesis abundant protein, SMP subgroup	PANTHER	PTHR31174	SEED MATURATION FAMILY PROTEIN	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G010540.1	CmaCh10G010540.1	mRNA