CmaCh10G008450 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G008450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Flowering locus T-like 1
Location	Cma_Chr10: 4046710 .. 4053668 (+)
RNA-Seq Expression	CmaCh10G008450
Synteny	CmaCh10G008450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAATTTTCCAACCATTCATCACGTCCCTCACCATTTCAACCATTTATCGTCATACTCGTCGTCGTCTTCTTCCTTTTCCATACGATCACAACGTCACACTCTGCGACTTTATTGAACGTTTTGGATTTTGGCGCCATACGTGGCGGGGGACGGGATTCGAGCCCCGCCTTTCGCCGTGCATGGGCAAAGGCTTGTACGTCGTCGGAATCCACAATTGTTTACGTTCCAAAGGGGAGGTTTTTGGTTCGGCCGATCGAGTTCCACGGCGGGTGTGGCAACAATGATATTAGTTTCCATATTGACGGGGCTCTGGTTGCACCGTCCGATTATCGTATCCTTGGCGACGTCGGAAGCTGGCTGAGCTTTGATGGCGTTGATGGGGTTTCTTTGAGTGGTGGAGTTCTTGATGCCAACGGCGCCGCCTTGTGGAACTGCAAATCCTCCGCCGCCCACTGCCCCGTCGGAGCCATGGTGACTACTCTAATTCTAATTCTATTATTTAAAAACTTTTAAACACATTTATTTTTATTTTGGGATAATTATTAAAATTTTAATTTTAATATATATTTTAATAAAATAAAATAAAATAAAATTTAAAATCTAAATCTAAAATAATATTTAACTTTTTTTTATTAAACTTAAAAAATAATTTTAAAAATATATTTTTAAATAATATATGGTGCGAACAAATTTTCAAGAGGTACAGTTGCATGGAATGGTTGCATGGGGAGAGCGGAGTTGGTATCCTTATTGCTTTGTTTGTTGTTATGGAGAGTTCTCTAAGTCAACTGGGAGCATTCCCAGTACCGCTAGCAGGCCAGCCTGGCCATGAGTGCGATGGGAACAGGCTTCCCAAAAAGCCAGCCCAGGGCCAGAGTCAGCATAGAATGAAGGGGACGACCCTAATGTTGGGTTGGCAAAGCCGAACTTTTTTTAATCTTTTTCTTCTTACTCTTTCTCATTTTAGCTAAAATCATACTCTACTGTACACAATAAATTATTTTAAATATTGTCATAGTTTTGTATTAAACAGGTTTCGTTTTCTTGTTTGGAAAATAAAAGACACTGAATTTTAGGAACTCGAACAATATAAGGATTAGAGGGATGATGTCCAAAAACAGCCAACTATTCCATATATTGATCGATGGATGCAAGAACGTGTTGATGGAAGGAGTGAATATCGTGGCCCCGAGTCATAGCCCTAACACGGATGGCATCCACATTGAAACATCCACGCACGTGACTATCGTTAACTCTATCATCCAAACAGGAGATGATTGTATTTCCATCGGCCCTGGGTCACGCAATTTGTGGATTCAACGTATCCGATGTGGACCTGGTCATGGCATTAGGTAGATCGTTTTATATCTTATTAACTATTTAATATATAATTTTATTATTAATTATTAATATTTAAATTATTTATAGTACTTATAATTAAAATAAAAATAAAAAATCCAATGGCTGCAGCATAGGAAGCTTGGCACACAACAAGAACGAGCCTGGAGTACGAAACGTTACCGTTTCGAATGCAATTTTCTCAGGAACGCAAAATGGGCTGAGAATAAAATCATGGGCCAGGCCCAGCTCTGGATTTGTGTACGGAGTCCAATTCCTTGGTGCCACCATGCATAATGTCCAAAACCCCATTCTCATTGACCAACACTACTGCCCGCACAACCTAAACTGCCCCGGTCAGGTATGACATATATACCCTTTTGACTAAATTTATATTAATATTCGAGACGGGAATGAAGAACGGGACGAGGAAAGCATTCCCGTCCCTATTCCCGTTCAATCAATAGAGATAAATTTCTCTCTACTCCCTCTCTTATTTCCAACCTAAATAAGGATCGTCTGCCTCATTACGAACAAGTCCTCATGAGGTCCCGAGAGGAGAACAAAACATCCCTAATTATGAACGAGTTTTCTGTTAGTTATTTTACTTTCGTATTTACAAATTTATAATTGTGAGATCCTACATCGGTTGGAGAGGGGAACAAAACATTCATCATATGGGTGTGAAAATTTCTCTTTAGTAGACACGTTTTAAAAACAGTGAGACTGGCAGTGATATGTAACGGGCTAAAGCAGACAATATTTGCTCGCGGTGGACTAGAACTGTTACAAATGGTACTAGAGCTAGACAACCGATCGTGTGCCAACAAGGACACTGAGCCCCCAAGGGGAGTGGATTGTGAGATCTCACATCAGTTGGAGAGGAGAACGAAGCATTCCTTATAAGAGTGTGAAAACATCTCCCTAACATACACGTTTTAAAATCGTGAGGCTAACTACGATATGTAACAGGGTAAAGCAAACAGTATCTATTAGCAGTAGCTTGAGCTGTTACAATAATTTTAAAGGAAGACCGACTTTCATTTCTCTTAGTTATTATTTGAGCAACATCTCACACATTCCGATCTGTTTGATAACGACTAATTATGAAACGACGCTTAGTGTTCATATTTACTAATTGTTCATTTTTTTTTTTTTGAACAGGAGTCGGGAATCAAGATAAGCAATATAATATATAAAGACATCGTAGGAACTTCCGCCACACCAATTGCCATAAAGTTTGATTGTAGTTCAAGAAACCCTTGCAATGGCATAAGGCTTGAGGATGTTCGCTTAACTTACCAAAATGAAGTAGCCAAGTCTTCATGTGAATATGCCAATGGTAAAGCCTTGGGTTTGGTTCAACCAAATGGTTGCTTTTCTTAACGATCTTCGTTACCCTAGTTTCCCAGTTCCCGACGTCGGGTATATATATGTATTAAAGTTATATCTCAGCCGTTTTAAAACGAGTTTCTAATACATGAATCTAAACTGATACAATATATAGAAGTTTAGGGTTTAAATCGATACAATTATTAGTTAATGTTTTTTTCAATGATCAGTCGCGTCTTATTTTATAGTAACTGGTTTCTGTATCGTACAATCAGCTTTATAAGAACTGTTCAAGGGAGGGACGTAATAATCTCAATACAATCTCGGTGGGTCGGGGTTGGGTTTCTTACATTTTTTTTATAAATAATTATATGTATTAAATAAATAAAAAAATTAAAGTTTTTTTTCCCCAAAGATAGGTGGGGAATGGAGTTAGTCATCTTTAGGGTTTTATTGGCCTCTCACAAAAGTTTCTAAGCTTTTTAATATTCCATTTTGGAAAAGACTAATAAAAGTGAAATTAGAATTTTATGTCAGATGAAAAAAAAAAATCACGGGTATATAAGTGAAAGACAATTTTTTATCGACATATACGAGTTTTTTTTTTTTTTTCAGTAAAACTAAAGATATAATGATAGATTTATAGAACCGAAAAATCTGAAGATGTGAATTCACGTTAATGCCCTCAAACTACCCTAGGAACCTACAAGACCACGAGGGCAACCCTGGTAGACAAAGGTAACTGCCTAAGTTGATAGCAGGAGTGTTCGAGAATGGAGTGAAGCTATTTAACCTAAATTTGTTTAGTCTTATAGATCCCGTTTAATAATTATTTAATTTTTTAAAACAAAAATTTTAAGTAGACAACCATACTAAAAAAAAACTCATAGATGAAAGTAGCTTTAATAAATTTAATATTAAAAAATAAAAAATTAAATAGTTATCAAACCGGACCTAATTTGTTAAGACTTTATAATATAATTATACCGTTTTTTGGTTCAAGAACGTGTAGATATAGAGATTTGAACTTCTGATCTTTTAGTCGAAGAATTATGTTCATATTCTATTGAACGTTGTTGTCGTATCAGATGATTGAACCTCTGACATCAAGTGAGATAGTGCTGTCATGTACGATCGAGATCGGCTCGCTTTCAAAACCCTAATGTATAACTCACAAAAGTTTGACAAGAAACCCATTAATGCATAAATATTCGTTTTGAAAGTGATAAATGCACAACAAAGAGATGAAATTACCATTTTGGTATTTTTTTTAAATTAAAGAAAATCAAATTTTAGAATAAATCAAATTTTCGATTTGGTCCTTGAATTCTTAGTTATTTACATAATTTACGTAAATTTACGATAATTGTCAAACAGGATTTTTTGCTAAATAGGGTTTCAAATTTTTAATTTTGTATTTAAAATATCTCTAATAAATTTAAAATTTATAAAAATTTATATTTAAGAGAACCATAAATTTTTATATTGTAAGGTAGACCTATAAATTAAAAAAAAAAATTAAAATTTAGGGACTAATTTGTAATTTTAAAAATTCATTGATCAAATTGACACAAGTATATTTACGTTAAGCATTTTGTTGTTTTGTTCTTTTTATGTCCCGTCAATTATTTACAAAATGCTAAAAACATCGATTTATTCACAAACAAATAAAAATATTGATGGAAATTTTTACACGTCGATTACTTAGTACCAGGTATCGTGCATGCATGACACAGTCGAATTATCATAGCAAAAAAGCACATCGATTGAGACAAGTAGATTGAGACAATAGGAGAATAATTTTCTCGATGGTAGAAAGCAAGAAGGGTAGGGTACCCTAAGAGGAGATATAAATAGAGCATTGCCCTTCAAGAACTTCTTCAAAAGAGAATTAGGTCACCTCCCAGCTCGGTTTCGACACGCCATGCCGAGAAATCGTGACCCTCTAGTCGTCGGGAGAGTGATCGGCGACGTCGTCGACTCGTTCTCGAGGTCCATCTCGATTAGGGTTGTTTACAACTCGAGGGAAGTTAACAATGGGTGTGAGCTCAAACCCTCTCAAGCTGTCAACAAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTAGAAGCTTTGTTTTACTTTTTTTCTTTCCTTTTTCTTCTTCTTTTTTACCTCTCATTTCTTTTCGTTAGGTTATGGTGGATCCCGACGCTCCTAGCCCTAGCGATCCCAATCTAAGAGAATACTTGCATTGGTACGTCCTCTCGTTCTCGTTCTTTTCCACTGTAAACCTATATTTTATACCTACAGTAAGGACAGTCTACCCTAATCTCAAAAATCGAGTATTACGTTTCTATTGTCGTGTCAACGTTTTATCAACATGGTTACATGTTCATGACTTCTGGGTATCAAAGCTTCTATCTAATCATACAAAACTGGACCATGTTTTTTTTTAGAAATATCGAAAAAATAGTTAGAAAATTGTGGTCAAAACTACTTTACGTGTCTTGGAATGAAAATGTACTAAAAGCATAAAACACTGAACAAAAGTTGGTCGGGTTAGCTCGAGAATTGACTCTTAGCTTTACGAGTAATAATTCTTTATATTTATTAAAGTGAAAAAAAAATTATTTTAAGGATTAGAAAATGATTATGAATTTGATGGCTATGTTGTAGAAAAAGGTGTACGGATCATAAAAGACAAACTTTTAAAAAAATAAAAATAAAAAAATAAATAGAAAAGAAATGGACTTTCACTGTTAGGACAGAAAAGGAATAAAGCTGAAAACTGGTCTGATTGATGGATCGAACTCAGTCCGTAAATGAAAGAATTTTTGTATAGTTATTATTTTTTTAAATTTATTTTTAATTGTCTTTTTTATAATAATAATAATAATAATAATAATTATTATTATTATTATTATTGTTATGTCGATTTAGTTTTAATTTGGTTTTTATAGTTTTAAATATTTTTAATTTAGTCAAATATCGAGTGGACAAAATTACGTTTGCGAGTTATTCGTGCAATTTCAATAAATTGTAGGGATCAAATTGAAATTTTTTTGAATTATAAGGATGAAATTGAAATTAAGCTTAATTTGTCGGGATCCATTTAAAAAAAATTCAACATTTTTCTTAATCTTGTACTCGAATTAAGCTTGTTTTTTCAACATGAACTAGTGGATGAGATGGGCAAATTTTGTTTTTTCAACATGAACCAGTCAATGAGATGGGTGAACCCTCGTCCTCGACCCTTCTTCTTCAATATGAACTAGTTGACAAGATGGGCATACCTTGCTTTTTCCACACGAACCGGTCAATGAGATGGGTGGACCCTCCTCCTCTCGACCCTTTTTCTTCTTCAGCATGAACTAGTCAAGAAAATGGGCAAACTCTACTTTTTCAACACGAGTCAATCAATGAGATGGGTAGACCCTCTCTACCCTCCTCCTCCTCCTCTTACTCGACCTTTCTTCTTCTTCAACATGAACTAGTCGAGAAAATGGGCAAACCCTATTTTTTCAACACAAGTCAATCGATGAGATGGGTAGACCCTCCCGACCCTCCTCCTCCTCCTACTCGACCTTTCTTCTTCTTCAACATGCACTAGTCGAGAAAATGGGCAAATCCTACTTTTTCAACACGAACGAGTTGATGAGATGGGTGGACCCTCCTCCTCCTCCTCACTTTTTGCTACATAAATATACCACATATTAGACTCGACCTTTTCTAACCTCGATCATTCTCTTTAATTCTCTTTCATATTTTGGTTCATTTGACAGGTTAGTGACCGATATTCCAGCTACAACCGAGGCAACCTTTGGTACGTTGTTCTTTTAGTTAACACATAAACAAAATTCCTAAAAAAACCCGACACGAAAAACAAATCATTGTAGAGCGGGAAATCAAACCCTAGCAATGTTAATAAAAAACCAACAAACTTAAACCAATTGAACTATGTTGAGGTTGACGGGTCGACCCGTGAATGGTAGGACAAGAGATAGTGTGCTACGAGAATCCAAGACCAACGGTGGGTATCCACCGTTTTGTGCTGGTCTTGTTCCGGCAGCTCGGAAGGCAAACGGTGTATGCTCCTGGGTGGCGCCAGAACTTCAACACCAGACACTTTGCAGAGCTTTACAATCTTGGTTCGCCAGTCGCCGCCGTCTATTTCAATTGCCAAAGGGAAAATGGCTCCGGTGGAAGGAGAAGAGCCGGCGATGAATGTTCATAAAAACACTTCACTTCACATTATATTATCAACCAATATATTGTAATAACA

mRNA sequence

ATGGCTAAATTTTCCAACCATTCATCACGTCCCTCACCATTTCAACCATTTATCGTCATACTCGTCGTCGTCTTCTTCCTTTTCCATACGATCACAACGTCACACTCTGCGACTTTATTGAACGTTTTGGATTTTGGCGCCATACGTGGCGGGGGACGGGATTCGAGCCCCGCCTTTCGCCGTGCATGGGCAAAGGCTTGTACGTCGTCGGAATCCACAATTGTTTACGTTCCAAAGGGGAGGTTTTTGGTTCGGCCGATCGAGTTCCACGGCGGGTGTGGCAACAATGATATTAGTTTCCATATTGACGGGGCTCTGGTTGCACCGTCCGATTATCGTATCCTTGGCGACGTCGGAAGCTGGCTGAGCTTTGATGGCGTTGATGGGGTTTCTTTGAGTGGTGGAGTTCTTGATGCCAACGGCGCCGCCTTGTGGAACTGCAAATCCTCCGCCGCCCACTGCCCCGTCGGAGCCATGGAGTCGGGAATCAAGATAAGCAATATAATATATAAAGACATCGTAGGAACTTCCGCCACACCAATTGCCATAAAGTTTGATTGTAGTTCAAGAAACCCTTGCAATGGCATAAGGCTTGAGGATGTTCGCTTAACTTACCAAAATGAAGTAGCCAAGTCTTCATGTGAATATGCCAATGGTCACCTCCCAGCTCGGTTTCGACACGCCATGCCGAGAAATCGTGACCCTCTAGTCGTCGGGAGAGTGATCGGCGACGTCGTCGACTCGTTCTCGAGGTCCATCTCGATTAGGGTTGTTTACAACTCGAGGGAAGTTAACAATGGGTGTGAGCTCAAACCCTCTCAAGCTGTCAACAAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCCGACGCTCCTAGCCCTAGCGATCCCAATCTAAGAGAATACTTGCATTGGTTAGTGACCGATATTCCAGCTACAACCGAGGCAACCTTTGGACAAGAGATAGTGTGCTACGAGAATCCAAGACCAACGGTGGGTATCCACCGTTTTGTGCTGGTCTTGTTCCGGCAGCTCGGAAGGCAAACGGTGTATGCTCCTGGGTGGCGCCAGAACTTCAACACCAGACACTTTGCAGAGCTTTACAATCTTGGTTCGCCAGTCGCCGCCGTCTATTTCAATTGCCAAAGGGAAAATGGCTCCGGTGGAAGGAGAAGAGCCGGCGATGAATGTTCATAAAAACACTTCACTTCACATTATATTATCAACCAATATATTGTAATAACA

Coding sequence (CDS)

ATGGCTAAATTTTCCAACCATTCATCACGTCCCTCACCATTTCAACCATTTATCGTCATACTCGTCGTCGTCTTCTTCCTTTTCCATACGATCACAACGTCACACTCTGCGACTTTATTGAACGTTTTGGATTTTGGCGCCATACGTGGCGGGGGACGGGATTCGAGCCCCGCCTTTCGCCGTGCATGGGCAAAGGCTTGTACGTCGTCGGAATCCACAATTGTTTACGTTCCAAAGGGGAGGTTTTTGGTTCGGCCGATCGAGTTCCACGGCGGGTGTGGCAACAATGATATTAGTTTCCATATTGACGGGGCTCTGGTTGCACCGTCCGATTATCGTATCCTTGGCGACGTCGGAAGCTGGCTGAGCTTTGATGGCGTTGATGGGGTTTCTTTGAGTGGTGGAGTTCTTGATGCCAACGGCGCCGCCTTGTGGAACTGCAAATCCTCCGCCGCCCACTGCCCCGTCGGAGCCATGGAGTCGGGAATCAAGATAAGCAATATAATATATAAAGACATCGTAGGAACTTCCGCCACACCAATTGCCATAAAGTTTGATTGTAGTTCAAGAAACCCTTGCAATGGCATAAGGCTTGAGGATGTTCGCTTAACTTACCAAAATGAAGTAGCCAAGTCTTCATGTGAATATGCCAATGGTCACCTCCCAGCTCGGTTTCGACACGCCATGCCGAGAAATCGTGACCCTCTAGTCGTCGGGAGAGTGATCGGCGACGTCGTCGACTCGTTCTCGAGGTCCATCTCGATTAGGGTTGTTTACAACTCGAGGGAAGTTAACAATGGGTGTGAGCTCAAACCCTCTCAAGCTGTCAACAAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCCGACGCTCCTAGCCCTAGCGATCCCAATCTAAGAGAATACTTGCATTGGTTAGTGACCGATATTCCAGCTACAACCGAGGCAACCTTTGGACAAGAGATAGTGTGCTACGAGAATCCAAGACCAACGGTGGGTATCCACCGTTTTGTGCTGGTCTTGTTCCGGCAGCTCGGAAGGCAAACGGTGTATGCTCCTGGGTGGCGCCAGAACTTCAACACCAGACACTTTGCAGAGCTTTACAATCTTGGTTCGCCAGTCGCCGCCGTCTATTTCAATTGCCAAAGGGAAAATGGCTCCGGTGGAAGGAGAAGAGCCGGCGATGAATGTTCATAA

Protein sequence

MAKFSNHSSRPSPFQPFIVILVVVFFLFHTITTSHSATLLNVLDFGAIRGGGRDSSPAFRRAWAKACTSSESTIVYVPKGRFLVRPIEFHGGCGNNDISFHIDGALVAPSDYRILGDVGSWLSFDGVDGVSLSGGVLDANGAALWNCKSSAAHCPVGAMESGIKISNIIYKDIVGTSATPIAIKFDCSSRNPCNGIRLEDVRLTYQNEVAKSSCEYANGHLPARFRHAMPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDLRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS

Homology

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BLAST of CmaCh10G008450 vs. ExPASy Swiss-Prot
Match: Q93WI9 (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.0e-80
Identity = 135/171 (78.95%), Postives = 156/171 (91.23%), Query Frame = 0


Query: 231 RNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDLRT 290
           R+RDPLVVGRV+GDV+D+F RS +++V Y S+ V+NGCELKPS   ++PRVE+GG D+RT
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRT 65

Query: 291 FFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLV 350
           F+TLVMVDPDAPSPSDPNLREYLHWLVTDIP TT A+FGQE++CYE+PRPT+GIHR V V
Sbjct: 66  FYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFV 125

Query: 351 LFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 402
           LF+QLGRQTVYAPGWRQNFNT+ FAELYNLGSPVAAVYFNCQRE GSGGRR
Sbjct: 126 LFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

[Close]

BLAST of CmaCh10G008450 vs. ExPASy Swiss-Prot
Match: Q9SXZ2 (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 1.2e-76
Identity = 130/169 (76.92%), Postives = 147/169 (86.98%), Query Frame = 0


Query: 233 RDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDLRTFF 292
           RDPL+V RV+GDV+D F+RSI+++V Y  REV NG +L+PSQ  NKPRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 293 TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 352
           TLVMVDPD PSPS+P+LREYLHWLVTDIPATT  TFG EIVCYENP PT GIHR V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 353 RQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 402
           RQLGRQTVYAPGWRQNFNTR FAE+YNLG PVAAV++NCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of CmaCh10G008450 vs. ExPASy Swiss-Prot
Match: Q8VWH2 (Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 5.9e-76
Identity = 129/168 (76.79%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 234 DPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDLRTFFT 293
           DPLVVGR++GDV+D F R  ++ V Y +R V+NGCELKPS    +PRV +GG D+RTF+T
Sbjct: 8   DPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMRTFYT 67

Query: 294 LVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLFR 353
           LVMVDPDAPSPS+PNLREYLHWLVTDIP TT ATFGQE++CYE+PRPT+GIHR V VLF+
Sbjct: 68  LVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLFQ 127

Query: 354 QLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 402
           QLGRQTVYAPGWRQNF+TR+FAELYNLGSPVA VYFNCQRE GSGGRR
Sbjct: 128 QLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175

[Close]

BLAST of CmaCh10G008450 vs. ExPASy Swiss-Prot
Match: Q9S7R5 (Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.1e-73
Identity = 127/169 (75.15%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 233 RDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDLRTFF 292
           RDPLVVG V+GDV+D F+R +S++V Y  REV NG +L+PSQ +NKP VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 293 TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 352
           TLVMVDPD PSPS+P+ REYLHWLVTDIPATT   FG E+VCYE+PRP  GIHR VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 353 RQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 402
           RQLGRQTVYAPGWRQ FNTR FAE+YNLG PVAA YFNCQRENG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of CmaCh10G008450 vs. ExPASy Swiss-Prot
Match: Q9XH43 (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.2e-56
Identity = 109/171 (63.74%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 234 DPLVVGRVIGDVVDSFSRSISIRVVYN-SREVNNGCELKPSQAVNKPRVEIGGTDLRTFF 293
           DPLV+GRVIG+VVD F+ S+ + V YN S+ V NG EL PS   +KPRVE+ G DLR+FF
Sbjct: 7   DPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFF 66

Query: 294 TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 353
           T++M+DPD P PSDP LRE+LHW+VTDIP TT+ +FG+EIV YE PRP +GIHRFV +LF
Sbjct: 67  TMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVFLLF 126

Query: 354 RQLGRQTVY-APGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRR 403
           +Q  RQTV  AP  R  FNTR FAE   LGSPVAAV+FNCQRE  +  RRR
Sbjct: 127 KQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRE--TAARRR 175

[Close]

BLAST of CmaCh10G008450 vs. ExPASy TrEMBL
Match: A0A6J1JI71 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111485342 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-101
Identity = 219/392 (55.87%), Postives = 219/392 (55.87%), Query Frame = 0


Query: 1   MAKFSNHSSRPSPFQPFIVILVVVFFLFHTITTSHSATLLNVLDFGAIRGGGRDSSPAFR 60
           MAKFSNHSSRPSPFQPFIVILVVVFFLFHTITTSHSATLLNVLDFGAIRGGGRDSSPAFR
Sbjct: 1   MAKFSNHSSRPSPFQPFIVILVVVFFLFHTITTSHSATLLNVLDFGAIRGGGRDSSPAFR 60

Query: 61  RAWAKACTSSESTIVYVPKGRFLVRPIEFHGGCGNNDISFHIDGALVAPSDYRILGDVGS 120
           RAWAKACTSSESTIVYVPKGRFLVRPIEFHGGCGNNDISFHIDGALVAPSDYRILGDVGS
Sbjct: 61  RAWAKACTSSESTIVYVPKGRFLVRPIEFHGGCGNNDISFHIDGALVAPSDYRILGDVGS 120

Query: 121 WLSFDGVDGVSLSGGVLDANGAALWNCKSSAAHCPVGAM--------------------- 180
           WLSFDGVDGVSLSGGVLDANGAALWNCKSSAAHCPVGAM                     
Sbjct: 121 WLSFDGVDGVSLSGGVLDANGAALWNCKSSAAHCPVGAMTLNFRNSNNIRIRGMMSKNSQ 180

Query: 181 ------------------------------------------------------------ 220
                                                                       
Sbjct: 181 LFHILIDGCKNVLMEGVNIVAPSHSPNTDGIHIETSTHVTIVNSIIQTGDDCISIGPGSR 240

[Close]

BLAST of CmaCh10G008450 vs. ExPASy TrEMBL
Match: A0A6J1JGX2 (protein HEADING DATE 3A-like OS=Cucurbita maxima OX=3661 GN=LOC111484998 PE=3 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 3.2e-101
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 288
           MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL
Sbjct: 1   MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 60

Query: 289 RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 348
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120

Query: 349 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 408
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

[Close]

BLAST of CmaCh10G008450 vs. ExPASy TrEMBL
Match: A6XN26 (Flowering locus T-like 1 OS=Cucurbita maxima OX=3661 GN=FTL1 PE=2 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.2e-100
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 288
           MPRNRDPLVVGRVIGDVVDSFSRSISIRVVY+SREVNNGCELKPSQAVNKPRVEIGGTDL
Sbjct: 1   MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYDSREVNNGCELKPSQAVNKPRVEIGGTDL 60

Query: 289 RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 348
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120

Query: 349 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 408
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

[Close]

BLAST of CmaCh10G008450 vs. ExPASy TrEMBL
Match: A6YE09 (FTL1 OS=Cucurbita moschata OX=3662 GN=LOC111461306 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.8e-97
Identity = 171/180 (95.00%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 288
           MPR+RDPLVVGRVIGDV+DSFSRSISIRV YNSR+V NGCELKP Q +NKPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFSRSISIRVAYNSRKVKNGCELKPCQVINKPRVEIGGTDL 60

Query: 289 RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 348
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPT GIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTAGIHRFV 120

Query: 349 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 408
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

[Close]

BLAST of CmaCh10G008450 vs. ExPASy TrEMBL
Match: A0A6J1D9F0 (protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 5.1e-91
Identity = 164/178 (92.13%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 288
           MPR+RDPLVVGRVIGDVVDSFSRSISIRV Y+SREVNNGCELKPSQ VN+PRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDSFSRSISIRVTYSSREVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 289 RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 348
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATT A FGQEIVCYE+PRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRFV 120

Query: 349 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDE 407
           LVLFRQLGRQTVYAPGWRQNFNTR FAELYNLG PVAAVYFNCQRE+GSGGRRR  D+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDD 178

[Close]

BLAST of CmaCh10G008450 vs. NCBI nr
Match: XP_022987940.1 (polygalacturonase-like [Cucurbita maxima])

HSP 1 Score: 379.4 bits (973), Expect = 3.9e-101
Identity = 219/392 (55.87%), Postives = 219/392 (55.87%), Query Frame = 0


Query: 1   MAKFSNHSSRPSPFQPFIVILVVVFFLFHTITTSHSATLLNVLDFGAIRGGGRDSSPAFR 60
           MAKFSNHSSRPSPFQPFIVILVVVFFLFHTITTSHSATLLNVLDFGAIRGGGRDSSPAFR
Sbjct: 1   MAKFSNHSSRPSPFQPFIVILVVVFFLFHTITTSHSATLLNVLDFGAIRGGGRDSSPAFR 60

Query: 61  RAWAKACTSSESTIVYVPKGRFLVRPIEFHGGCGNNDISFHIDGALVAPSDYRILGDVGS 120
           RAWAKACTSSESTIVYVPKGRFLVRPIEFHGGCGNNDISFHIDGALVAPSDYRILGDVGS
Sbjct: 61  RAWAKACTSSESTIVYVPKGRFLVRPIEFHGGCGNNDISFHIDGALVAPSDYRILGDVGS 120

Query: 121 WLSFDGVDGVSLSGGVLDANGAALWNCKSSAAHCPVGAM--------------------- 180
           WLSFDGVDGVSLSGGVLDANGAALWNCKSSAAHCPVGAM                     
Sbjct: 121 WLSFDGVDGVSLSGGVLDANGAALWNCKSSAAHCPVGAMTLNFRNSNNIRIRGMMSKNSQ 180

Query: 181 ------------------------------------------------------------ 220
                                                                       
Sbjct: 181 LFHILIDGCKNVLMEGVNIVAPSHSPNTDGIHIETSTHVTIVNSIIQTGDDCISIGPGSR 240

[Close]

BLAST of CmaCh10G008450 vs. NCBI nr
Match: XP_022987455.1 (protein HEADING DATE 3A-like [Cucurbita maxima])

HSP 1 Score: 378.6 bits (971), Expect = 6.6e-101
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 288
           MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL
Sbjct: 1   MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 60

Query: 289 RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 348
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120

Query: 349 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 408
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

[Close]

BLAST of CmaCh10G008450 vs. NCBI nr
Match: ABI94605.1 (flowering locus T-like 1 [Cucurbita maxima])

HSP 1 Score: 376.7 bits (966), Expect = 2.5e-100
Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 288
           MPRNRDPLVVGRVIGDVVDSFSRSISIRVVY+SREVNNGCELKPSQAVNKPRVEIGGTDL
Sbjct: 1   MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYDSREVNNGCELKPSQAVNKPRVEIGGTDL 60

Query: 289 RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 348
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120

Query: 349 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 408
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

[Close]

BLAST of CmaCh10G008450 vs. NCBI nr
Match: XP_023516680.1 (protein HEADING DATE 3A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.2 bits (949), Expect = 2.4e-98
Identity = 174/180 (96.67%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 288
           MPR+RDPLVVGRVIGDV+DSFSRSISIRVVYNSREV NGCELKP QA+NKPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQAINKPRVEIGGTDL 60

Query: 289 RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 348
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPT GIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTAGIHRFV 120

Query: 349 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 408
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

[Close]

BLAST of CmaCh10G008450 vs. NCBI nr
Match: KAG6590114.1 (Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023780.1 Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367.1 bits (941), Expect = 2.0e-97
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 288
           MPR+RDPLVV RVIGDV+DSFSRSISIRVVYNSREV NGCELKP Q +NKPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60

Query: 289 RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 348
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120

Query: 349 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 408
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

[Close]

BLAST of CmaCh10G008450 vs. TAIR 10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 288.5 bits (737), Expect = 8.4e-78
Identity = 130/169 (76.92%), Postives = 147/169 (86.98%), Query Frame = 0


Query: 233 RDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDLRTFF 292
           RDPL+V RV+GDV+D F+RSI+++V Y  REV NG +L+PSQ  NKPRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 293 TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 352
           TLVMVDPD PSPS+P+LREYLHWLVTDIPATT  TFG EIVCYENP PT GIHR V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 353 RQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 402
           RQLGRQTVYAPGWRQNFNTR FAE+YNLG PVAAV++NCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

[Close]

BLAST of CmaCh10G008450 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 277.7 bits (709), Expect = 1.5e-74
Identity = 127/169 (75.15%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 233 RDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDLRTFF 292
           RDPLVVG V+GDV+D F+R +S++V Y  REV NG +L+PSQ +NKP VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 293 TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 352
           TLVMVDPD PSPS+P+ REYLHWLVTDIPATT   FG E+VCYE+PRP  GIHR VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 353 RQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 402
           RQLGRQTVYAPGWRQ FNTR FAE+YNLG PVAA YFNCQRENG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

[Close]

BLAST of CmaCh10G008450 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-56
Identity = 107/176 (60.80%), Postives = 135/176 (76.70%), Query Frame = 0


Query: 229 MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSRE-VNNGCELKPSQAVNKPRVEIGGTD 288
           M R  +PL+VGRVIGDV++ F+ S+++RV +NS   V+NG EL PS  ++KPRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 289 LRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRF 348
           LR+FFTL+M+DPDAPSPS+P +REYLHW+VTDIP TT+A+FG+EIV YE P+P  GIHR+
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 349 VLVLFRQLGRQTV-YAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRR 403
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE  +  RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRE--TAPRRR 174

[Close]

BLAST of CmaCh10G008450 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-54
Identity = 100/169 (59.17%), Postives = 130/169 (76.92%), Query Frame = 0


Query: 234 DPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDLRTFFT 293
           +PL++GRV+GDV+D F+ +  + V YN ++V+NG EL PS   +KPRVEI G DLR+FFT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 294 LVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLFR 353
           LVM+DPD P PSDP L+E+LHW+VT+IP TT+ATFG+E+V YE PRP++GIHRFV VLFR
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 354 QLGRQTVY--APGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGR 401
           Q  R+ ++   P  R +FNTR FA  Y+LG PVAAV+FN QRE  +  R
Sbjct: 130 QKQRRVIFPNIPS-RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

[Close]

BLAST of CmaCh10G008450 vs. TAIR 10
Match: AT2G27550.1 (centroradialis )

HSP 1 Score: 208.8 bits (530), Expect = 8.5e-54
Identity = 102/171 (59.65%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 234 DPLVVGRVIGDVVDSFSRSISIRVVYNS-REVNNGCELKPSQAVNKPRVEIGGTDLRTFF 293
           DPL+VGRVIGDVVD+  +++ + V YNS ++V NG EL PS    KP+VE+ G D+R+FF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 294 TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 353
           TLVM DPD P PSDP LRE+LHW+VTDIP TT+ +FG+EI+ YE PRP +GIHRFV +LF
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 354 RQLGRQTVYA-PGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRR 403
           +Q  R +V + P +R  FNTR FA   +LG PVAAV+FNCQRE  +  RRR
Sbjct: 127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRE--TAARRR 175

The following BLAST results are available for this feature:

BLAST of CmaCh10G008450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WI9	1.0e-80	78.95	Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV...	[more]
Q9SXZ2	1.2e-76	76.92	Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2	[more]
Q8VWH2	5.9e-76	76.79	Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT...	[more]
Q9S7R5	2.1e-73	75.15	Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1	[more]
Q9XH43	5.2e-56	63.74	CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1	[more]

BLAST of CmaCh10G008450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JI71	1.9e-101	55.87	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111485342 PE=3 SV=1	[more]
A0A6J1JGX2	3.2e-101	100.00	protein HEADING DATE 3A-like OS=Cucurbita maxima OX=3661 GN=LOC111484998 PE=3 SV...	[more]
A6XN26	1.2e-100	99.44	Flowering locus T-like 1 OS=Cucurbita maxima OX=3661 GN=FTL1 PE=2 SV=1	[more]
A6YE09	2.8e-97	95.00	FTL1 OS=Cucurbita moschata OX=3662 GN=LOC111461306 PE=2 SV=1	[more]
A0A6J1D9F0	5.1e-91	92.13	protein HEADING DATE 3A OS=Momordica charantia OX=3673 GN=LOC111018250 PE=3 SV=1	[more]

BLAST of CmaCh10G008450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987940.1	3.9e-101	55.87	polygalacturonase-like [Cucurbita maxima]	[more]
XP_022987455.1	6.6e-101	100.00	protein HEADING DATE 3A-like [Cucurbita maxima]	[more]
ABI94605.1	2.5e-100	99.44	flowering locus T-like 1 [Cucurbita maxima]	[more]
XP_023516680.1	2.4e-98	96.67	protein HEADING DATE 3A-like [Cucurbita pepo subsp. pepo]	[more]
KAG6590114.1	2.0e-97	96.11	Protein HEADING DATE 3A, partial [Cucurbita argyrosperma subsp. sororia] >KAG702...	[more]

BLAST of CmaCh10G008450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65480.1	8.4e-78	76.92	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT4G20370.1	1.5e-74	75.15	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G62040.1	1.4e-56	60.80	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G03840.1	1.7e-54	59.17	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT2G27550.1	8.5e-54	59.65	centroradialis	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024535	Pectate lyase superfamily protein	PFAM	PF12708	Pectate_lyase_3	coord: 40..87 e-value: 1.6E-6 score: 28.1
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 233..398 e-value: 5.3E-58 score: 197.6
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 240..394
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 27..153 e-value: 2.7E-22 score: 81.2 coord: 154..232 e-value: 6.9E-12 score: 47.0
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 277..388 e-value: 9.1E-13 score: 48.7
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 157..218 e-value: 2.8E-9 score: 36.5
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	PANTHER	PTHR11362	PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN	coord: 232..401
IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	CDD	cd00866	PEBP_euk	coord: 255..391 e-value: 1.63426E-42 score: 144.824
None	No IPR available	PANTHER	PTHR11362:SF9	PROTEIN FLOWERING LOCUS T-RELATED	coord: 232..401
IPR001858	Phosphatidylethanolamine-binding, conserved site	PROSITE	PS01220	PBP	coord: 292..314
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 161..222
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 23..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G008450.1	CmaCh10G008450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004650	polygalacturonase activity