CmaCh10G007180 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGATACTCCATTCATTCCCCTAGTCCTTGCGTCTGGCGCGACTTCAGACTTGCAATTCCTATCGATAGAACCAGAGATCTCTTTTGAAATCAATTTTCTTCGCCCCCACCGGATTTGATGGTGAGTGATTTTGATGTCGATGAAATGCTGATCGAATTGCTATGGCAACAATTCCTTTGGATTTCGTTATCCCTGTCATTTCGCATTTGTAATTTCGTGGATCGTGCTTTTGCAGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCGACTCTTGCGGTCCTGATGATCGCTGTTGGACTTGTCATTACCGCTTCGTTTTTCATGTAAGTTCGATCGGATCCATTTCTCTGTAGCAAAATGAAATCTGGTTCATGTTAATTATTCGGAGTGAAATGAGAGGTTCTAGACAATTAGGTTAAGGATTGTCTAATTCTGTCATATGCTTGCTTAATTCACTTTGATTACAACGAAATGCTTAGAAGATTATTAGCTATCAAGAAAGATTGTGATCATTGGTTTGGGAAGGGAGGAAATCCGGAATTTTCTCGATCCAATCAAGTACCATTTTCTTTTTGCACCATCTATTCCGAAAATGAAAAACCATGTGAAATCCAAGCCCGAATGCGTGGACGTTTCATGCATTTGGTTCAACGATGTCTTTTAGGCTTTCATCCAACCACACGGCGGGACTAATTTTCATAATCCAAATCTATGTTTATACCGTTCAGCAAAAGAACGCCATTTTACCGTCAATAAAGAAGAGTCCACTCTCTATCATACTTCTCAAGGCAAACTTGGATTCTTAACGATCACAATAATAGGTACACTTTGATGTAAAATATTAGTTTATGGTCACCATTGACATGACGGGGATCACTGTATGTGACATATGTTGTTTGTTGCTTTGTGTAGTTGCAACTGTAACATGCACGGACGTTTCTAATGTAGATTATGGTTACATCTCTCTGTTAAGTTGATATCTATATTGAGAAAAAGTTATTGAATTTGATAAATTGGGTATTGATATTCATTGTCATGACCTATAATACAACCAAATTTCATGGTTTGCTGGTAAGGTTGGAGCCAGATGACTGTTTGTATCATTCTAATAGATCAAGCAAACCGTCGTCCCCTTATGGAGTCGATGGTTTGGGGTCGCTCTAACCGCATCGATTATCAATTTGCAGCTATGAAGCTACATCTTCTAGGAAAAACCGTTGTCTTGCCAAGGAACTCACTACAGGATCATTTGCCTCCGTTTTCTTGGTATGAATCTTTCAGTAGACGTCTTTTATTTTAAATGCAAAATTTTTCATCGATCATGTCAGTGGGAGAAGAACGCCCTTACTTTCACATTGACAATTGCTGTATATTTCTCGTTAATTATTGCTAGATTTGATCATGGAGCCTGATGTTATATATTTATGATTCTACGTTGTTATATGTTGCAGGGTTTTGGATCCTTGTTCTTGTTGCTTGCTTCTGGTATTTATGTCTGACCTATTGGAAGCACATGTTGAGAATTATATTTATCTAGCGGAGTCAGTTTTACATGTATGATCATGATGCTGGGCCAGGACTACTTCTATGAACAGTGGTCTCTTTTTTCCTTTTATGGAGCGTTATACTCATAACATGCATTGTGGTTGAAGGGATTTTGCAGAGTTGAGAATGTTAGTGCTGAAGAAATCAGCTTTTTGCTAGAAATTGAATCATGGCTCTCTACAATAACGTAGAAATTGGAACAAGGTTGGTATTGACTTCAATCCCATAAGTTCATAGCCACAATCCTTTAGACTCATATTTCTTGTGGGTTTTTTTTCCATGATTATTTTTGGTTAAATTATAAAAATTTGGACTTTTAAAAG AAGATACTCCATTCATTCCCCTAGTCCTTGCGTCTGGCGCGACTTCAGACTTGCAATTCCTATCGATAGAACCAGAGATCTCTTTTGAAATCAATTTTCTTCGCCCCCACCGGATTTGATGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCGACTCTTGCGGTCCTGATGATCGCTGTTGGACTTGTCATTACCGCTTCGTTTTTCATCTATGAAGCTACATCTTCTAGGAAAAACCGTTGTCTTGCCAAGGAACTCACTACAGGATCATTTGCCTCCGTTTTCTTGGGTTTTGGATCCTTGTTCTTGTTGCTTGCTTCTGGTATTTATGTCTGACCTATTGGAAGCACATGTTGAGAATTATATTTATCTAGCGGAGTCAGTTTTACATGTATGATCATGATGCTGGGCCAGGACTACTTCTATGAACAGTGGTCTCTTTTTTCCTTTTATGGAGCGTTATACTCATAACATGCATTGTGGTTGAAGGGATTTTGCAGAGTTGAGAATGTTAGTGCTGAAGAAATCAGCTTTTTGCTAGAAATTGAATCATGGCTCTCTACAATAACGTAGAAATTGGAACAAGGTTGGTATTGACTTCAATCCCATAAGTTCATAGCCACAATCCTTTAGACTCATATTTCTTGTGGGTTTTTTTTCCATGATTATTTTTGGTTAAATTATAAAAATTTGGACTTTTAAAAG ATGGCTCCGAAACCTGTTACGAGTCCCGTCCCCGAAGCCTGGTACCCGACTCTTGCGGTCCTGATGATCGCTGTTGGACTTGTCATTACCGCTTCGTTTTTCATCTATGAAGCTACATCTTCTAGGAAAAACCGTTGTCTTGCCAAGGAACTCACTACAGGATCATTTGCCTCCGTTTTCTTGGGTTTTGGATCCTTGTTCTTGTTGCTTGCTTCTGGTATTTATGTCTGA MAPKPVTSPVPEAWYPTLAVLMIAVGLVITASFFIYEATSSRKNRCLAKELTTGSFASVFLGFGSLFLLLASGIYV Homology
BLAST of CmaCh10G007180 vs. ExPASy Swiss-Prot
Match: E2RKN8 (Transmembrane protein 258 OS=Canis lupus familiaris OX=9615 GN=TMEM258 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.7e-11 Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy Swiss-Prot
Match: Q76LT9 (Transmembrane protein 258 OS=Gallus gallus OX=9031 GN=TMEM258 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.7e-11 Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy Swiss-Prot
Match: P61165 (Transmembrane protein 258 OS=Homo sapiens OX=9606 GN=TMEM258 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.7e-11 Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy Swiss-Prot
Match: P61166 (Transmembrane protein 258 OS=Mus musculus OX=10090 GN=Tmem258 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.7e-11 Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy Swiss-Prot
Match: Q32P84 (Transmembrane protein 258 OS=Bos taurus OX=9913 GN=TMEM258 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 6.1e-11 Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy TrEMBL
Match: A0A6J1JK65 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucurbita maxima OX=3661 GN=LOC111485321 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy TrEMBL
Match: A0A6J1HCT0 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucurbita moschata OX=3662 GN=LOC111461654 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.5e-31 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy TrEMBL
Match: A0A5D3CDN3 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002270 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.5e-28 Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy TrEMBL
Match: A0A0A0LZE8 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucumis sativus OX=3659 GN=Csa_1G588510 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.5e-28 Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of CmaCh10G007180 vs. ExPASy TrEMBL
Match: A0A1S3BR87 (Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST5 OS=Cucumis melo OX=3656 GN=LOC103492326 PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.5e-28 Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of CmaCh10G007180 vs. NCBI nr
Match: XP_022961024.1 (transmembrane protein 258 [Cucurbita moschata] >XP_022987919.1 transmembrane protein 258 [Cucurbita maxima] >XP_023515608.1 transmembrane protein 258 [Cucurbita pepo subsp. pepo] >KAG7023658.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.8 bits (364), Expect = 3.0e-31 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. NCBI nr
Match: KAG6589994.1 (Transmembrane protein 258, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.5 bits (345), Expect = 4.8e-29 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of CmaCh10G007180 vs. NCBI nr
Match: XP_004135715.1 (transmembrane protein 258 [Cucumis sativus] >XP_008450856.1 PREDICTED: transmembrane protein 258 [Cucumis melo] >KGN66242.1 hypothetical protein Csa_007439 [Cucumis sativus] >TYK10087.1 hypothetical protein E5676_scaffold16G002270 [Cucumis melo var. makuwa]) HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27 Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of CmaCh10G007180 vs. NCBI nr
Match: XP_038879770.1 (transmembrane protein 258 [Benincasa hispida]) HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27 Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0
BLAST of CmaCh10G007180 vs. NCBI nr
Match: XP_031385662.1 (transmembrane protein 258 [Punica granatum] >OWM66114.1 hypothetical protein CDL15_Pgr015541 [Punica granatum] >PKI49069.1 hypothetical protein CRG98_030521 [Punica granatum]) HSP 1 Score: 131.3 bits (329), Expect = 3.4e-27 Identity = 66/76 (86.84%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of CmaCh10G007180 vs. TAIR 10
Match: AT4G29735.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 107.8 bits (268), Expect = 3.8e-24 Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 0
BLAST of CmaCh10G007180 vs. TAIR 10
Match: AT4G29735.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0197 (InterPro:IPR007915); Has 190 Blast hits to 190 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 133; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). ) HSP 1 Score: 95.1 bits (235), Expect = 2.5e-20 Identity = 56/98 (57.14%), Postives = 64/98 (65.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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