CmaCh10G006520 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAACAGTGCTAGGGGAAGCTGGTTTAAACCCTAGAGATATTGGTTCCTCCATTGCATGCTGCCACCGCTTCCTCCGCCCGGGATTACCGTCGTTCATCGACGTTTCGTCTTCACTTCAGAGAGTATCAGCAAAAGAGATAATTAAAGTTGCGATTTAAGGAGATGGCGGAAGAGCAGGAGAAAACAGAAGCTGAACTCAAGCAAAATCCTAAAAGACGCAAGAAGCATGCTTTTCCCTATGGCAATTACCGAAGTTACTATGGCTACCGGGTATTTCTCCTGACCTATTCTTCCCCACTTACCTCGGAGTTCTATGTTGCCCTTCTTGTGGTAAATATAGTTCTGAGAAGTATTCTCGATTGTCTCCGGTTTCTGGTTAAGATTCGAACTAATGTCGGTTTGTGATAGAAACGAAAATTTAAAATTTCGAGACTTGGTGTAGACCAGTTAAGCTTGTTTTTCCAACTTCAGTGCTCTAATAATTTATGATTCGTTCTTATTCGGCCGACAGAATGTGCGTTACCCCTAGTTGCGTTTTCTTATTTTTTGTGTGGCAGTTAGGTCAAAAATTTGTTGAAGATCCGCGTCTAAAGGTTTTCAAGAAAGAATGGTTTGAAGGCAAGGATTGCCTGGATATTGGTTGCAATAGTGGGATGGTTACCATTCAGATAGGTAGCAATACTTCAATCTCAGTATTTATTTATTTATATTTATATATATATATATTAAAAAAAAAAAAAAAAGGATTGATACGTCCTTATCATGTGCCGTAATTTTATGAACTTCTTACTCATTTTACCAAAGGATATGCATGGAAGTCTCAAGTCTGAAAAGAAGTTTATATGCATGTTGCAGCAAAGACAATAAAACTATAGCAACTTGTCATTTCGCTATGAACTTAAAACTGTCTTTTGTGCATCTCAGTTCAAGAAAGCTCTGTTATCACTGGCTATTTTATTGTTCATTGAAGATTGTGGAATTGCTTTTTCTCAAATACTAGAGCTCTTTACTTATGCGGATAACTTTCTTTTCGCAGCTAGAAAGTTTAATTGCCGGAGGATTCTTGGCGTTGATATTGATCCCGGTAAGATTTACTCTAAAAGCTCTACAACTTCCATTGCAGATCCACTTTATACTTCTACAAAGTACATGAAAGCGGTTTTGTGAATAACTATCTTCTTTGGAGGTCTAAATCTTAATTGATGATGCATTCTATCATTAACTATTTTAAGCACTTGTAAATTAGTCATGTAAATTATAGCCTGGGATGGTTGGGTGCTGATTTATTGTTGGACTATATTATTAGGGAGATTAGTTGGAGAATTCTTATACAAAAAAAGTAATTGAAGGGTTTTACAGAAAAGGGTAGATATTAAAGGTGGTTGTTGATAAGGGTACGTGCGATAAATATTTAGATCTAGATAGTCTTGAGTGGTATGCCCTTTCCCCGTCCCCTATGGGCTGTAATTATAACCTGTAACACACTTATATTTTTTTTGGCTTTGTCCTATTGGATTGCCTCTTAGTAACTTACTTCATTGGTGGGAACTTGAATCTCTGTTCCTCCTTTATATTGAAAGAATCAAAGCTCGTGACCTGAAATTTTTGAGGGAACTTACATTGTTTGTTGAACTACATGGATCATAGTGACTTTATCAATACGAACTCTATCTTTTACTGGTGGCTTTAGTAATAATCACATCATGTTCTGGTAGTTATGTTAGGAGAAAATATATCTCAAAAGTGAAAGAATTGTTTGTATACCAAGGTACTTAGCCAGAGTTGATCTCCCAGTCTTTCTAAAATGATTGCTGAGTTTCCAACCTGAACTTCTCTTTATGCAAGATCGAGTTGACGATGCTTACCGGAATCTAAGAAGGGCAAGAATAAATGTTGGGAAGCCGGATAATGGTTTGGAGCTTGGTGCTTCTGGAGCTTCGAAGATAGATACAGAAGCTTCTACAAGTATTTCTTCTTCCAAAGAGCATGATCTTCATACCGATGTTTCCTTCCAACAGCAGAATTTTATATTTAGTCAATATCCACCTGAGAAGCACTATGATACAATTCTTTGGTAAGTTAATCTTTTTATCTTGTGTTGCGTATTAATGCTATTTGTTTTCTTGACCCTTGATGCATCTCCCTTCTGGGGTCACAATATGCGTTTTTTTTTTTTTTTTTTTTTACTGCAGTTCATTTTGATTTTTTTTTACTGCAGGTAATAAATTTGATCCCTGTTTGTTAAATTTAAACATAAACTGTATATATACAAAATAATTGCTATATACCAGNTTTTTTTTTTTTTTTTTTTTTCTGTACTGCAGTTTGAGTGTAGCAAAGTGGATTCATCTAAACTGGGGAGATGATGGTTTAATTACATTGTTTTACAAAATTTGGAGACTACTTCACCCGGTACTTGCCTTGTCATACACCTATGCACTTTGTCTTAAATGGTCCTAAGATCAATAATAACCTTGGTCAGTTATATGTTTGTATTTACTTTAATGTTTGATTAAGAACCTTCTTAATTATGCATTCATTCTGAAAAGGCAGGGTGGCATTCTTGTTTTGGAGCCTCAACCTTGGAAGTCTTATGAAGCCAACTATAGTGTTTCCGAGGTAAAAAATTTCATGCATCCAAATTGTTAATCAACAATTACTTTTAGTCAAACTTGAATTTTTTTCCGGTGCTCTTCTAGCATCTCATATCATATTGCCTTAGATCGCTGATCGTTCTAATGCAGACAACTAAAAAGAACTTCAAGTCTATAAGGATCCTTCCAGAAGAGTTCCAAGAGATACTCCTAGACAAGGTATTTTTATGATTTATTTGGCTTAGTTTTACAAACAGCATCAGTTTTCACTAACTTCTGGACAAAATACCACCCCAGATTGGGTTCAGAACAGTTGAAGCCTTAACCACCGGCTTGTCCCACAGCAATACAGGAGGATTCAATCGACCAATTTTTGTTTTCCGGAAGTGAATGTTTGTAATCTGGACATCTGAACCAAATTGAATGCAGAGAGCCATCAGCTGGTCTTTAGAAGTAGTTAGTTACAGGCCTTGTTTAGTTTAAATAGTACATTACATATTCCAGACATGGTAAAGAGTGGCTGTTTTTGAAGGGTGCCGTCTGTATTGGGATCCCTGTCACTTATGCGTAGGTGCTTTTTGAAGGCTTGTTGTAAGCTTCTGCTTTTTGATATTTACATCGTTATCCTTTTGAACAATCTTAACGCTGATATATATCACTATTCATGTACCGTTCATATATCATTTTCACTCATAACTAAGTTTAAACCTTTCTC TAACAGTGCTAGGGGAAGCTGGTTTAAACCCTAGAGATATTGGTTCCTCCATTGCATGCTGCCACCGCTTCCTCCGCCCGGGATTACCGTCGTTCATCGACGTTTCGTCTTCACTTCAGAGAGTATCAGCAAAAGAGATAATTAAAGTTGCGATTTAAGGAGATGGCGGAAGAGCAGGAGAAAACAGAAGCTGAACTCAAGCAAAATCCTAAAAGACGCAAGAAGCATGCTTTTCCCTATGGCAATTACCGAAGTTACTATGGCTACCGGTTAGGTCAAAAATTTGTTGAAGATCCGCGTCTAAAGGTTTTCAAGAAAGAATGGTTTGAAGGCAAGGATTGCCTGGATATTGGTTGCAATAGTGGGATGGTTACCATTCAGATAGCTAGAAAGTTTAATTGCCGGAGGATTCTTGGCGTTGATATTGATCCCGATCGAGTTGACGATGCTTACCGGAATCTAAGAAGGGCAAGAATAAATGTTGGGAAGCCGGATAATGGTTTGGAGCTTGGTGCTTCTGGAGCTTCGAAGATAGATACAGAAGCTTCTACAAGTATTTCTTCTTCCAAAGAGCATGATCTTCATACCGATGTTTCCTTCCAACAGCAGAATTTTATATTTAGTCAATATCCACCTGAGAAGCACTATGATACAATTCTTTGTTTGAGTGTAGCAAAGTGGATTCATCTAAACTGGGGAGATGATGGTTTAATTACATTGTTTTACAAAATTTGGAGACTACTTCACCCGGGTGGCATTCTTGTTTTGGAGCCTCAACCTTGGAAGTCTTATGAAGCCAACTATAGTGTTTCCGAGACAACTAAAAAGAACTTCAAGTCTATAAGGATCCTTCCAGAAGAGTTCCAAGAGATACTCCTAGACAAGATTGGGTTCAGAACAGTTGAAGCCTTAACCACCGGCTTGTCCCACAGCAATACAGGAGGATTCAATCGACCAATTTTTGTTTTCCGGAAGTGAATGTTTGTAATCTGGACATCTGAACCAAATTGAATGCAGAGAGCCATCAGCTGGTCTTTAGAAGTAGTTAGTTACAGGCCTTGTTTAGTTTAAATAGTACATTACATATTCCAGACATGGTAAAGAGTGGCTGTTTTTGAAGGGTGCCGTCTGTATTGGGATCCCTGTCACTTATGCGTAGGTGCTTTTTGAAGGCTTGTTGTAAGCTTCTGCTTTTTGATATTTACATCGTTATCCTTTTGAACAATCTTAACGCTGATATATATCACTATTCATGTACCGTTCATATATCATTTTCACTCATAACTAAGTTTAAACCTTTCTC ATGGCGGAAGAGCAGGAGAAAACAGAAGCTGAACTCAAGCAAAATCCTAAAAGACGCAAGAAGCATGCTTTTCCCTATGGCAATTACCGAAGTTACTATGGCTACCGGTTAGGTCAAAAATTTGTTGAAGATCCGCGTCTAAAGGTTTTCAAGAAAGAATGGTTTGAAGGCAAGGATTGCCTGGATATTGGTTGCAATAGTGGGATGGTTACCATTCAGATAGCTAGAAAGTTTAATTGCCGGAGGATTCTTGGCGTTGATATTGATCCCGATCGAGTTGACGATGCTTACCGGAATCTAAGAAGGGCAAGAATAAATGTTGGGAAGCCGGATAATGGTTTGGAGCTTGGTGCTTCTGGAGCTTCGAAGATAGATACAGAAGCTTCTACAAGTATTTCTTCTTCCAAAGAGCATGATCTTCATACCGATGTTTCCTTCCAACAGCAGAATTTTATATTTAGTCAATATCCACCTGAGAAGCACTATGATACAATTCTTTGTTTGAGTGTAGCAAAGTGGATTCATCTAAACTGGGGAGATGATGGTTTAATTACATTGTTTTACAAAATTTGGAGACTACTTCACCCGGGTGGCATTCTTGTTTTGGAGCCTCAACCTTGGAAGTCTTATGAAGCCAACTATAGTGTTTCCGAGACAACTAAAAAGAACTTCAAGTCTATAAGGATCCTTCCAGAAGAGTTCCAAGAGATACTCCTAGACAAGATTGGGTTCAGAACAGTTGAAGCCTTAACCACCGGCTTGTCCCACAGCAATACAGGAGGATTCAATCGACCAATTTTTGTTTTCCGGAAGTGA MAEEQEKTEAELKQNPKRRKKHAFPYGNYRSYYGYRLGQKFVEDPRLKVFKKEWFEGKDCLDIGCNSGMVTIQIARKFNCRRILGVDIDPDRVDDAYRNLRRARINVGKPDNGLELGASGASKIDTEASTSISSSKEHDLHTDVSFQQQNFIFSQYPPEKHYDTILCLSVAKWIHLNWGDDGLITLFYKIWRLLHPGGILVLEPQPWKSYEANYSVSETTKKNFKSIRILPEEFQEILLDKIGFRTVEALTTGLSHSNTGGFNRPIFVFRK Homology
BLAST of CmaCh10G006520 vs. ExPASy Swiss-Prot
Match: Q6NPC9 (Probable RNA methyltransferase At5g51130 OS=Arabidopsis thaliana OX=3702 GN=At5g51130 PE=2 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 2.0e-80 Identity = 152/279 (54.48%), Postives = 198/279 (70.97%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy Swiss-Prot
Match: A3KQ55 (7SK snRNA methylphosphate capping enzyme OS=Danio rerio OX=7955 GN=mepce PE=3 SV=2) HSP 1 Score: 186.0 bits (471), Expect = 5.5e-46 Identity = 106/293 (36.18%), Postives = 152/293 (51.88%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy Swiss-Prot
Match: Q8K3A9 (7SK snRNA methylphosphate capping enzyme OS=Mus musculus OX=10090 GN=Mepce PE=1 SV=2) HSP 1 Score: 181.4 bits (459), Expect = 1.4e-44 Identity = 104/284 (36.62%), Postives = 156/284 (54.93%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy Swiss-Prot
Match: Q7L2J0 (7SK snRNA methylphosphate capping enzyme OS=Homo sapiens OX=9606 GN=MEPCE PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 5.1e-44 Identity = 104/285 (36.49%), Postives = 153/285 (53.68%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy Swiss-Prot
Match: Q9U2R0 (Probable RNA methyltransferase Y17G7B.18 OS=Caenorhabditis elegans OX=6239 GN=Y17G7B.18 PE=3 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.5e-43 Identity = 102/278 (36.69%), Postives = 156/278 (56.12%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy TrEMBL
Match: A0A6J1JBF8 (RNA methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111485259 PE=3 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 1.2e-155 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy TrEMBL
Match: A0A6J1HBE1 (RNA methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111461838 PE=3 SV=1) HSP 1 Score: 553.9 bits (1426), Expect = 3.7e-154 Identity = 268/271 (98.89%), Postives = 270/271 (99.63%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy TrEMBL
Match: A0A5A7V9R8 (RNA methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001350 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124 Identity = 220/272 (80.88%), Postives = 245/272 (90.07%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy TrEMBL
Match: A0A5D3BG34 (RNA methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00080 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124 Identity = 220/272 (80.88%), Postives = 245/272 (90.07%), Query Frame = 0
BLAST of CmaCh10G006520 vs. ExPASy TrEMBL
Match: A0A1S3CJ98 (RNA methyltransferase OS=Cucumis melo OX=3656 GN=LOC103501041 PE=3 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124 Identity = 220/272 (80.88%), Postives = 245/272 (90.07%), Query Frame = 0
BLAST of CmaCh10G006520 vs. NCBI nr
Match: XP_022987832.1 (probable RNA methyltransferase At5g51130 isoform X1 [Cucurbita maxima]) HSP 1 Score: 558.9 bits (1439), Expect = 2.4e-155 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of CmaCh10G006520 vs. NCBI nr
Match: KAG6589938.1 (putative RNA methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 553.9 bits (1426), Expect = 7.6e-154 Identity = 268/271 (98.89%), Postives = 270/271 (99.63%), Query Frame = 0
BLAST of CmaCh10G006520 vs. NCBI nr
Match: XP_022961298.1 (probable RNA methyltransferase At5g51130 [Cucurbita moschata]) HSP 1 Score: 553.9 bits (1426), Expect = 7.6e-154 Identity = 268/271 (98.89%), Postives = 270/271 (99.63%), Query Frame = 0
BLAST of CmaCh10G006520 vs. NCBI nr
Match: XP_023516346.1 (probable RNA methyltransferase At5g51130 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 551.2 bits (1419), Expect = 5.0e-153 Identity = 267/271 (98.52%), Postives = 269/271 (99.26%), Query Frame = 0
BLAST of CmaCh10G006520 vs. NCBI nr
Match: XP_038878262.1 (probable RNA methyltransferase At5g51130 isoform X2 [Benincasa hispida]) HSP 1 Score: 455.7 bits (1171), Expect = 2.8e-124 Identity = 224/272 (82.35%), Postives = 247/272 (90.81%), Query Frame = 0
BLAST of CmaCh10G006520 vs. TAIR 10
Match: AT5G51130.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 300.4 bits (768), Expect = 1.4e-81 Identity = 152/279 (54.48%), Postives = 198/279 (70.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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