CmaCh10G004740 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh10G004740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr10: 2150847 .. 2153576 (+)
RNA-Seq ExpressionCmaCh10G004740
SyntenyCmaCh10G004740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTAACATTCTTAACCCGGTTTCATGGCGCTTTCGTCGTCTATCGACATCTCAAATTCATAGCTTTGTTTCTCTCCATATATTCAACAGCCTTTTGAGCTTTAACATTGCTAGATGGTATCGTTATTTGCACTGCAGCAACCCGGGCCGATCAAGCTTCATCCTGTTGCTCAATGCACTGAGCAGGCTGGCTGCTTGTATCAAAACTGAACAAATTCTTGTGTGTACATAATCATCCGGGGATACAAGAAAGTCACCTTTCAAGGTTGCTTTATAATTTGAAGATCCCCTGACATTCTTTTGTTTTGGAACAAAAATTCATCCAGATGTGTATTTAGCTATACCATTATTTAAAGAAAATTTTGAGTTGTGTTATGCCTATTTACACCTCAGTTTTTGCTCAAAATTTTCTCCTACCTGATCATTCATTTTATTTCTATATTATGATCAACACTTTCTCTAGGGATAAGAATGTCTTTTCCTACAATGTTTCTACATTCATAAGAGATTGTATTTTACCTTATTTCTCCTCGTCTCCATCCTTGTTAAATCATTAACCGATTTCCCCGAAAAATATATTTATTGTAAAGAAAGGCTTAGAATCGCATAAATACATTATGAATTTTGATTTTTTTTTTTATTTGTGTTGAGAAATTTTAAATTTCTAATATTTCGATATATGTGTTAATTAGCTAAGCAACATAAAGTTAGAGTAAATTGATGATATAGAATATATCGATTAAAGTATTGTTATTGAATTATTTATAGCTTGTATTTTGTGGTGATTAAAAAAAAAAAACTATTATTTTTTTAAGTTGAAGCATATGCATGGATTTTTTTTTTTTAAAAAAAATAATATACATTTTATTTTCATTATTTATAAATATAACTTAACTAAGCTCATTAATCAATATTTGTAAAATATAACTGATTAAACATACCTTCTATTTCTATATACCAAACCATTTAAATATTTTAATTATATCAGAAATATTAAAATAAGATTTAAAAAATCGAGCCACTCATTATCTGAATTTTAAGAGAAAAAATAAAAAGGAAATGCTAAAATGGTCCAGCTGTTACAAGCGTATAAAACCCCGGTCGTTTCTTCTTCTTCTTTTACAGCCACGTCACGGAATACAACTGCTTAAAAGCATTTGCGTTGCTTTCATTCCAATGGCAGAGGTGCAGAGCTGAGGCCCCGTCCTGCCACTGCACGGTTCGTTTCATATTCTTCGCTTATCTGCATATCTTTCTCGATTCCTTCACGCCGTTCTGTTGACAGGTGAAAGAGTTTTTCGAAGGCTTCATTTCTGTAATTTTATTTTGTGGTCTCTGTACTCTGCTTGTGCTTTGATTCTATTATAGTCGTTTCTTCTTCCTCATGGATTCGTATTTTGGTGCTCCATGCATAGCGCGTATGAGAATCGACATGTAAGAGACGTTTCATGCATTTAGCCGACGATAACTGAACTTCCTCTTTGCTTTGGATGTTATGAACTTCTCGTTTTGATATGGTAGACTGTTTCGCTGTTATTCTGTAGCTTCCTTGTTCATGGCGTCGGAGAGAACTTACAGTAGTGGATGTGTTTGAATGCGAGCATCACGAGCATTTTGAGAATTTTTCTTTGGCTGACTAGTACTGTATGGCTGTTCATGGAAATAACTTGAAAAAACAGAATGAAAAGAAAAAACATGGAGAAGATTTAAGTATTAACATTATTTTTTACTGAAAACGGCTTAAATAAACTTTAGTTTCCTTCACAATATTTTCGAAAATCATATTTCATGTGGTTTACGCTTTGCGTGTAAATGTTTTCATAGGTGGCTGAGTTTCATGGATGTTGTTCATAGCTTTATTCAATCCACTCTATGCTTTTTGCTTTCCGCTTTTGTATTAACTCTCTGATTTTCTAAAGGAAAATCTTTTCAGTTATTTGCATGTATTGATAATAGTTATTTTAACAATACTATCGTAGGAGAGAAAATAAACTTCGAATATGTGTTAGCGATTAGTTTGCATTTTCTAACTAATTTAGTCGGTTATCTGATGGCAGAATTTGCGCTGTGTATAAGGTTCGAGAAGCTTTACTTCTCTCTATTTTCACGTCTGTAGATGATATTTGATTTCACAAAAAATAAAATAAAATAAAATGATCCACTGATTGACGAATTTTGATTCTTCAATTTTTGCCTTCGTATGGGGACAATAATGAACCGGAGTCTATTACCCCTTTTCTTACAGTAATTGAATAGTTATGCTGGTTTAGTTCTTTGATTGGAGGGTCGTAGAAGAGGACAGAGCAGAGAACAAAGTAATGAAAATTCTTCAAGAGTCCCATCTATATCATCTTGCTTATCCTGATAAGTTGTAATGCATTTATTTCCTAATACTGACCAAGATTTGAGTAAATGGGAATTGAAGCGTTGACAGAGCTGGGATTATTTCATCTAGATTTGTATGGCTGTGCTACTAGAGAAATTCAAAGAATAGATAGGCACGCCATGGAGCAACTTTCCCAAGCTTTTACTTCCATTTATATATTATGGGTTATTGCTCTCTATCAACTGTATCACGTATTGATATTTCAGTGTCAATGTAATTTCTCCTTTACATAAGATGCCTAGAAAGCTGTTTGTCCATTAGCCTATTTATTCATGGTTTTTTTAATCTATTGTTAACATCAAGTTTCCAATGCTAGTACATGGAGAATCTCAGGGTCATGA

mRNA sequence

ATGAGCAACCCGGGCCGATCAAGCTTCATCCTGTTGCTCAATGCACTGAGCAGGCTGGCTGCTTGTATCAAAACTGAACAAATTCTTGTGTGTGCAGAGCTGAGGCCCCGTCCTGCCACTGCACGGTTCGTTTCATATTCTTCGCTTATCTGCATATCTTTCTCGATTCCTTCACGCCGTTCTGTTGACAGTACATGGAGAATCTCAGGGTCATGA

Coding sequence (CDS)

ATGAGCAACCCGGGCCGATCAAGCTTCATCCTGTTGCTCAATGCACTGAGCAGGCTGGCTGCTTGTATCAAAACTGAACAAATTCTTGTGTGTGCAGAGCTGAGGCCCCGTCCTGCCACTGCACGGTTCGTTTCATATTCTTCGCTTATCTGCATATCTTTCTCGATTCCTTCACGCCGTTCTGTTGACAGTACATGGAGAATCTCAGGGTCATGA

Protein sequence

MSNPGRSSFILLLNALSRLAACIKTEQILVCAELRPRPATARFVSYSSLICISFSIPSRRSVDSTWRISGS
Homology
[Close]
BLAST of CmaCh10G004740 vs. NCBI nr
Match: KAG6589777.1 (Formin-like protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.3 bits (155), Expect = 4.8e-07
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 0 

Query: 32   AELRPRPATARFVSYSSLICISFSIPSRRSVDS 65
            AELRPRPATARFVSYSSLICISFSIP RRSVDS
Sbjct: 1210 AELRPRPATARFVSYSSLICISFSIPPRRSVDS 1242

The following BLAST results are available for this feature:
BLAST of CmaCh10G004740 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh10G004740 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh10G004740 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589777.14.8e-0796.97Formin-like protein 13, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmaCh10G004740 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G004740.1CmaCh10G004740.1mRNA