CmaCh10G003880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G003880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ras guanine nucleotide exchange factor Q-like protein
Location	Cma_Chr10: 1788564 .. 1790627 (-)
RNA-Seq Expression	CmaCh10G003880
Synteny	CmaCh10G003880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGAGGGGAGCCCACATCTCTCCCTAGATATGTAACAGGCCAAAACAAACAATATTTGGGAGCCGTGTAACCATCCTCATACAATAGTACAGACTGATACCCAATACAATCTTTATACCATACTTTACAACTCTTTCTTTCTCTCTCTCTTTTATGTCACCAAATATTTAGAACACATTCCAAACCAGCTTTCTTATTGCCTCTGCCTCCTCCACAGCCTGTCAAACCTGAATTATTAGCACCAGGGATTCTAATTTTATAGTCAGAGGCTGTTTGCTTTACTGTTTCTTCCAAAGCAAACCAAAGGGAAGGGATATTTTTGGTGATTTGATTGGAGGCTTTGTTCATATTCATCAGGGAATTGGAAACTGGAAACTGGAAACAAAGCTTTGGCTTTGGCATGAAGAGCACAGAAGAAGAACATGTTCAATGATCATCCTCCTCCTGGCTGCTCTTTCTCTATCAGGTCAATCCCACTTCAAATCTCTTCACTTTTTCATATCTAAATCTCTACTTTTGCTGCAGATTCGATGGGTTTGTTTAAATCCCAGAAAAAAAACGAATCAAAATGCTCCTAAATTTTCTGGGATTCCTCAATTATCAGTGATTTTAACCACAAATCCTCTGTTTTCTCTGTCTTAACCCTTCTGAGAAATTCATCTGATAGAGCACAATTTAAAGGTCTAGGAAGAACCACCTACTAGATCTCTCTCTCTCCATCACCAAAAGATTGAATTTTGGAATTTGAACTCATTACTTCCTTGATGCATGCCTTAATTTTGCCTTAGACAGTAGAAATTGGTGAAGTAGACTCTGTCTCCATCCACATCTCAGTGGCTGTACAAAATTCACACCCACCCCACTTAATTGTCAAACATAACTTTTGCCTAAATTTTCTTTGTGGGTTTCAAGAATGTTTTGTCTTTGTAGTCCTACATTATTTTTGATACCCATTTGGTTTCAGGCATGGGAACAAGACTTGAACCCACTTTCAAGCCTTTACCCAACTCTGCCCACACTACCAACACCTTCATAGTTCGAAGAGTGCATGACTGGCACCATTTTCAGGGCTCAACAACAAGGCTTCCCCACAAATTCTATACTTCTGCCATGACTGGATCACTTGACAAGATGCTGCAAAAAGGAGATGTGGATGCCATAAGAAAGACAATGCAGGGGCATGAAGATGTGTTCAAGAATCAGGTAAGATAGAGTTTATAGGCGTTTGTTGAAGCAAAACTGGTTGAATTTGAATATATGGCTTGCAGGTGAAGGAACTCCATCGGCTGTATAGTGTTCAGAAGATGCTGATGGAAGAGGTGAGGAGAAAATCAATGAACCATTTGCAGTTCAAAAACAGGGAAAATCAAACAGAACAGAGCAGTGGAGGGGGACTGATTTTGAAGCTTCAAAGCTTCAGATCAGATGATCCGAGCAGTGGGAGCTGTTCTGGAGACAACATGAGAATAATGTCAAGAGGGTTTGATCTTGAAAGGCCTGCAGAGGAGGACATGTCGACGGGAGTTAGCGCTGTTGATGAAGACCGAGCCGGGCCGAGCAAGATGAACACAGGTGATGGTTGTGAAGAGGAAGACAGTGATGTTGAGCTAACTCTAAGCATTGGTGGTAGTGTCAGGAAGAAGAGATCAAAATCAGAAAGAGGTGAAGAATGCAGTGACCCAAGCACACCCATGAGCAGCTCAAGTGGAACATGTGATCAGGAAACAAAACGGCCACATTGGCTGTTCCAAAGTTTAAAGCTCAAGTAGAAGAAGCTGATAACAAGAACAGGTTCACATTATTAACAAAATTTTATCCAATTGAGATTCTAATAAAAGGGATGTCTGAGATGCCCATTTGTGGCTGCATATACAACTCTTGTTTTTGTATACTCTTACTCCATTTCTTTCCTCTCCACTTGCTTAGACAATCCAAGAAACAAACCAAATTTGATACCCATGAACAGTTTAAGCCAACTACTAGTGCATATTGTTCTATTTAAACTTTAAAATACGTGGCTTCCACACTTTTATAAAAAAAAGTTTCGTTTAGATCTAGGGAG

mRNA sequence

TGAAGAGGGGAGCCCACATCTCTCCCTAGATATGTAACAGGCCAAAACAAACAATATTTGGGAGCCGTGTAACCATCCTCATACAATAGTACAGACTGATACCCAATACAATCTTTATACCATACTTTACAACTCTTTCTTTCTCTCTCTCTTTTATGTCACCAAATATTTAGAACACATTCCAAACCAGCTTTCTTATTGCCTCTGCCTCCTCCACAGCCTGTCAAACCTGAATTATTAGCACCAGGGATTCTAATTTTATAGTCAGAGGCTGTTTGCTTTACTGTTTCTTCCAAAGCAAACCAAAGGGAAGGGATATTTTTGGTGATTTGATTGGAGGCTTTGTTCATATTCATCAGGGAATTGGAAACTGGAAACTGGAAACAAAGCTTTGGCTTTGGCATGAAGAGCACAGAAGAAGAACATGTTCAATGATCATCCTCCTCCTGGCTGCTCTTTCTCTATCAGGCATGGGAACAAGACTTGAACCCACTTTCAAGCCTTTACCCAACTCTGCCCACACTACCAACACCTTCATAGTTCGAAGAGTGCATGACTGGCACCATTTTCAGGGCTCAACAACAAGGCTTCCCCACAAATTCTATACTTCTGCCATGACTGGATCACTTGACAAGATGCTGCAAAAAGGAGATGTGGATGCCATAAGAAAGACAATGCAGGGGCATGAAGATGTGTTCAAGAATCAGGTGAAGGAACTCCATCGGCTGTATAGTGTTCAGAAGATGCTGATGGAAGAGGTGAGGAGAAAATCAATGAACCATTTGCAGTTCAAAAACAGGGAAAATCAAACAGAACAGAGCAGTGGAGGGGGACTGATTTTGAAGCTTCAAAGCTTCAGATCAGATGATCCGAGCAGTGGGAGCTGTTCTGGAGACAACATGAGAATAATGTCAAGAGGGTTTGATCTTGAAAGGCCTGCAGAGGAGGACATGTCGACGGGAGTTAGCGCTGTTGATGAAGACCGAGCCGGGCCGAGCAAGATGAACACAGGTGATGGTTGTGAAGAGGAAGACAGTGATGTTGAGCTAACTCTAAGCATTGGTGGTAGTGTCAGGAAGAAGAGATCAAAATCAGAAAGAGGTGAAGAATGCAGTGACCCAAGCACACCCATGAGCAGCTCAAGTGGAACATGTGATCAGGAAACAAAACGGCCACATTGGCTGTTCCAAAGTTTAAAGCTCAAGTAGAAGAAGCTGATAACAAGAACAGGTTCACATTATTAACAAAATTTTATCCAATTGAGATTCTAATAAAAGGGATGTCTGAGATGCCCATTTGTGGCTGCATATACAACTCTTGTTTTTGTATACTCTTACTCCATTTCTTTCCTCTCCACTTGCTTAGACAATCCAAGAAACAAACCAAATTTGATACCCATGAACAGTTTAAGCCAACTACTAGTGCATATTGTTCTATTTAAACTTTAAAATACGTGGCTTCCACACTTTTATAAAAAAAAGTTTCGTTTAGATCTAGGGAG

Coding sequence (CDS)

ATGATCATCCTCCTCCTGGCTGCTCTTTCTCTATCAGGCATGGGAACAAGACTTGAACCCACTTTCAAGCCTTTACCCAACTCTGCCCACACTACCAACACCTTCATAGTTCGAAGAGTGCATGACTGGCACCATTTTCAGGGCTCAACAACAAGGCTTCCCCACAAATTCTATACTTCTGCCATGACTGGATCACTTGACAAGATGCTGCAAAAAGGAGATGTGGATGCCATAAGAAAGACAATGCAGGGGCATGAAGATGTGTTCAAGAATCAGGTGAAGGAACTCCATCGGCTGTATAGTGTTCAGAAGATGCTGATGGAAGAGGTGAGGAGAAAATCAATGAACCATTTGCAGTTCAAAAACAGGGAAAATCAAACAGAACAGAGCAGTGGAGGGGGACTGATTTTGAAGCTTCAAAGCTTCAGATCAGATGATCCGAGCAGTGGGAGCTGTTCTGGAGACAACATGAGAATAATGTCAAGAGGGTTTGATCTTGAAAGGCCTGCAGAGGAGGACATGTCGACGGGAGTTAGCGCTGTTGATGAAGACCGAGCCGGGCCGAGCAAGATGAACACAGGTGATGGTTGTGAAGAGGAAGACAGTGATGTTGAGCTAACTCTAAGCATTGGTGGTAGTGTCAGGAAGAAGAGATCAAAATCAGAAAGAGGTGAAGAATGCAGTGACCCAAGCACACCCATGAGCAGCTCAAGTGGAACATGTGATCAGGAAACAAAACGGCCACATTGGCTGTTCCAAAGTTTAAAGCTCAAGTAG

Protein sequence

MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTSAMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQFKNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSAVDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGTCDQETKRPHWLFQSLKLK

Homology

[Close]

BLAST of CmaCh10G003880 vs. ExPASy TrEMBL
Match: A0A6J1JLX5 (uncharacterized protein LOC111485591 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485591 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.4e-139
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS
Sbjct: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 258

[Close]

BLAST of CmaCh10G003880 vs. ExPASy TrEMBL
Match: A0A6J1JL69 (uncharacterized protein LOC111485591 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485591 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 5.1e-137
Identity = 256/258 (99.22%), Postives = 256/258 (99.22%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS
Sbjct: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQ  ELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQ--ELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 256

[Close]

BLAST of CmaCh10G003880 vs. ExPASy TrEMBL
Match: A0A6J1E0H0 (uncharacterized protein LOC111429720 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429720 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.9e-136
Identity = 252/258 (97.67%), Postives = 255/258 (98.84%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MII+LLAALSLSGMGTRLEPTF PLPNSAHTTNTFIVRRVH+WHHFQ STTRLPHKFYTS
Sbjct: 1   MIIILLAALSLSGMGTRLEPTFNPLPNSAHTTNTFIVRRVHEWHHFQSSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQ+EQSSGGGLILKLQS RSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQSEQSSGGGLILKLQSLRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 258

[Close]

BLAST of CmaCh10G003880 vs. ExPASy TrEMBL
Match: A0A6J1E3X6 (uncharacterized protein LOC111429720 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429720 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 6.9e-134
Identity = 250/258 (96.90%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MII+LLAALSLSGMGTRLEPTF PLPNSAHTTNTFIVRRVH+WHHFQ STTRLPHKFYTS
Sbjct: 1   MIIILLAALSLSGMGTRLEPTFNPLPNSAHTTNTFIVRRVHEWHHFQSSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQ  ELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQ--ELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQ+EQSSGGGLILKLQS RSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQSEQSSGGGLILKLQSLRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 256

[Close]

BLAST of CmaCh10G003880 vs. ExPASy TrEMBL
Match: A0A0A0LU66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423280 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.0e-81
Identity = 197/314 (62.74%), Postives = 218/314 (69.43%), Query Frame = 0


Query: 14  MGTRLEPTFKPLPNSAHTTNT----------FIVRRVHDW-HHFQGST--TRLPHKFYTS 73
           MGTRLEPTF PL  SAH +++          F ++R++ W HHFQ ST  TR P K   +
Sbjct: 1   MGTRLEPTFNPLATSAHISSSSSSSSNNNTLFTIQRLNAWQHHFQDSTTATRFPLKLIYN 60

Query: 74  ------AMTGSLD-------KMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLM 133
                   TGSLD       KMLQKGDVDAIRKTMQ HED FKNQVKELHRLYSVQKMLM
Sbjct: 61  NTSSPMTTTGSLDKFQEAINKMLQKGDVDAIRKTMQDHEDAFKNQVKELHRLYSVQKMLM 120

Query: 134 EEVRR----------KSMNHLQFKNRE--NQTEQSSGGGLILKLQSFRSDDPS----SGS 193
           EE+R+          K+MNHL F NRE  NQT Q++GGGLI  LQS RSDDPS    SGS
Sbjct: 121 EELRKESKQNALWCPKAMNHLLFNNRENQNQTAQTTGGGLIFNLQSLRSDDPSSRERSGS 180

Query: 194 CSGDNMRIMSRGFDLERP-AEEDMSTGVSAVDEDRAGPS------KMNTGDGCEEEDSDV 253
           CSGDNMRI+SRGFDLERP AEEDMSTGVS VDED+AGPS      KM+  DGCE+E+SDV
Sbjct: 181 CSGDNMRIISRGFDLERPAAEEDMSTGVSTVDEDQAGPSTPIVVGKMSI-DGCEDEESDV 240

Query: 254 ELTLSIGGSVRKKRS-------------------KSERG-EECSDPSTPMSSSSGTCDQE 259
           ELTLSIGGS+ KKRS                   KSERG +ECSDP+TPMSSSS TCDQE
Sbjct: 241 ELTLSIGGSLSKKRSKSFPPLTQKKREIDSSLSFKSERGDQECSDPTTPMSSSSATCDQE 300

[Close]

BLAST of CmaCh10G003880 vs. NCBI nr
Match: XP_022988303.1 (uncharacterized protein LOC111485591 isoform X1 [Cucurbita maxima])

HSP 1 Score: 505.4 bits (1300), Expect = 3.0e-139
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS
Sbjct: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 258

[Close]

BLAST of CmaCh10G003880 vs. NCBI nr
Match: XP_022988304.1 (uncharacterized protein LOC111485591 isoform X2 [Cucurbita maxima])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 256/258 (99.22%), Postives = 256/258 (99.22%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS
Sbjct: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQ  ELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQ--ELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 256

[Close]

BLAST of CmaCh10G003880 vs. NCBI nr
Match: KAG6589699.1 (hypothetical protein SDJN03_15122, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023379.1 hypothetical protein SDJN02_14404 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 253/258 (98.06%), Postives = 255/258 (98.84%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MII+LLAALSLSGMGTRLEPTF PLPNSAHTTNTFIVRRVH+WHHFQ STTRLPHKFYTS
Sbjct: 1   MIIILLAALSLSGMGTRLEPTFNPLPNSAHTTNTFIVRRVHEWHHFQSSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQTEQSSGGGLILKLQS RSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQTEQSSGGGLILKLQSLRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 258

[Close]

BLAST of CmaCh10G003880 vs. NCBI nr
Match: XP_022921442.1 (uncharacterized protein LOC111429720 isoform X1 [Cucurbita moschata])

HSP 1 Score: 495.0 bits (1273), Expect = 4.0e-136
Identity = 252/258 (97.67%), Postives = 255/258 (98.84%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MII+LLAALSLSGMGTRLEPTF PLPNSAHTTNTFIVRRVH+WHHFQ STTRLPHKFYTS
Sbjct: 1   MIIILLAALSLSGMGTRLEPTFNPLPNSAHTTNTFIVRRVHEWHHFQSSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQ+EQSSGGGLILKLQS RSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQSEQSSGGGLILKLQSLRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 258

[Close]

BLAST of CmaCh10G003880 vs. NCBI nr
Match: XP_023515485.1 (uncharacterized protein LOC111779630 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.0 bits (1268), Expect = 1.5e-135
Identity = 252/258 (97.67%), Postives = 254/258 (98.45%), Query Frame = 0


Query: 1   MIILLLAALSLSGMGTRLEPTFKPLPNSAHTTNTFIVRRVHDWHHFQGSTTRLPHKFYTS 60
           MII+LLAALSLSGMGTRLEPTF PLPNSAHTTNTFIVRRVH+WH FQ STTRLPHKFYTS
Sbjct: 1   MIIILLAALSLSGMGTRLEPTFNPLPNSAHTTNTFIVRRVHEWHDFQSSTTRLPHKFYTS 60

Query: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120
           AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF
Sbjct: 61  AMTGSLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQF 120

Query: 121 KNRENQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180
           KNRENQTEQSSGGGLILKLQS RSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA
Sbjct: 121 KNRENQTEQSSGGGLILKLQSLRSDDPSSGSCSGDNMRIMSRGFDLERPAEEDMSTGVSA 180

Query: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240
           VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT
Sbjct: 181 VDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSVRKKRSKSERGEECSDPSTPMSSSSGT 240

Query: 241 CDQETKRPHWLFQSLKLK 259
           CDQETKRPHWLFQSLKLK
Sbjct: 241 CDQETKRPHWLFQSLKLK 258

[Close]

BLAST of CmaCh10G003880 vs. TAIR 10
Match: AT5G57340.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-16
Identity = 69/208 (33.17%), Postives = 100/208 (48.08%), Query Frame = 0


Query: 65  SLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQFKNRE 124
           S+D+ L+K + ++IR TMQ  ED+FK QV+ELHR+Y+ QKM+M +++ +S    Q+    
Sbjct: 71  SMDRFLEKQNAESIRHTMQAQEDIFKQQVRELHRVYNTQKMMMTQLKHRS----QYWTVN 130

Query: 125 NQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDL------ERPAEEDMSTGV 184
           N+ +  S                 +GSCSG ++  + R          E   E  +S G+
Sbjct: 131 NKDQPGS--------------RERTGSCSGIDLENVVRATQTTTDHIEESELELTLSIGL 190

Query: 185 SAVDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSV--------RKKRSKSERGEECSDP 244
           S         S   T      +D D   T S+  S             + S   +E S P
Sbjct: 191 S---------SSSTTMTTTTNKDMDYSSTTSMRSSSDNCNNQSNNNLYNNSNNNQESSGP 250

Query: 245 STPMSSSSGT-CDQETKRPHWLFQSLKL 258
           +TPMSSSS T  D+E KRPHWLFQ L +
Sbjct: 251 NTPMSSSSTTSLDREKKRPHWLFQGLSI 251

[Close]

BLAST of CmaCh10G003880 vs. TAIR 10
Match: AT5G57340.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 3.4e-16
Identity = 69/208 (33.17%), Postives = 100/208 (48.08%), Query Frame = 0


Query: 65  SLDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQFKNRE 124
           S+D+ L+K + ++IR TMQ  ED+FK QV+ELHR+Y+ QKM+M +++ +S    Q+    
Sbjct: 53  SMDRFLEKQNAESIRHTMQAQEDIFKQQVRELHRVYNTQKMMMTQLKHRS----QYWTVN 112

Query: 125 NQTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIMSRGFDL------ERPAEEDMSTGV 184
           N+ +  S                 +GSCSG ++  + R          E   E  +S G+
Sbjct: 113 NKDQPGS--------------RERTGSCSGIDLENVVRATQTTTDHIEESELELTLSIGL 172

Query: 185 SAVDEDRAGPSKMNTGDGCEEEDSDVELTLSIGGSV--------RKKRSKSERGEECSDP 244
           S         S   T      +D D   T S+  S             + S   +E S P
Sbjct: 173 S---------SSSTTMTTTTNKDMDYSSTTSMRSSSDNCNNQSNNNLYNNSNNNQESSGP 232

Query: 245 STPMSSSSGT-CDQETKRPHWLFQSLKL 258
           +TPMSSSS T  D+E KRPHWLFQ L +
Sbjct: 233 NTPMSSSSTTSLDREKKRPHWLFQGLSI 233

[Close]

BLAST of CmaCh10G003880 vs. TAIR 10
Match: AT1G26620.1 (Plant protein of unknown function (DUF863) )

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-07
Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 0


Query: 76  DAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHL----QFKNRENQTEQSS 135
           D ++ TM  HE VFKNQV ELHRLY VQK L+EEV+ K++N +         EN++++  
Sbjct: 16  DFMKHTMLEHEAVFKNQVHELHRLYRVQKNLVEEVKGKNLNEVMNVSDHHTSENESKRKL 75

Query: 136 GGGLI--------LKLQSFRSDDPSSGSCSGD-----NMRIMSRGFDLERPAEEDMST 177
            G L+           Q+      + GS +GD     +++   R  DL+ PA+E + T
Sbjct: 76  HGFLLPNSTCGEGSSTQASNGRLQNGGSSNGDASEGRDVKGRRRMIDLQLPADEYLDT 133

[Close]

BLAST of CmaCh10G003880 vs. TAIR 10
Match: AT5G67390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 66  LDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQFKNREN 125
           ++K+L   D   ++  M  HE+ FK QV ELHRLY VQK+LM     K+M   +F  + N
Sbjct: 1   MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILM-----KNMEINKFTTKNN 60

Query: 126 QTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIM 161
               +SG G  ++      D P++ S   +N+ IM
Sbjct: 61  HV--NSGLGTFIRRVDNEIDRPANFSGGNNNIEIM 88

[Close]

BLAST of CmaCh10G003880 vs. TAIR 10
Match: AT5G67390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF863) (TAIR:AT1G69360.1); Has 186 Blast hits to 186 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 66  LDKMLQKGDVDAIRKTMQGHEDVFKNQVKELHRLYSVQKMLMEEVRRKSMNHLQFKNREN 125
           ++K+L   D   ++  M  HE+ FK QV ELHRLY VQK+LM     K+M   +F  + N
Sbjct: 1   MEKLLNPYDKQCMKMAMLKHEETFKQQVYELHRLYQVQKILM-----KNMEINKFTTKNN 60

Query: 126 QTEQSSGGGLILKLQSFRSDDPSSGSCSGDNMRIM 161
               +SG G  ++      D P++ S   +N+ IM
Sbjct: 61  HV--NSGLGTFIRRVDNEIDRPANFSGGNNNIEIM 88

The following BLAST results are available for this feature:

BLAST of CmaCh10G003880 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G003880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLX5	1.4e-139	100.00	uncharacterized protein LOC111485591 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JL69	5.1e-137	99.22	uncharacterized protein LOC111485591 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E0H0	1.9e-136	97.67	uncharacterized protein LOC111429720 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E3X6	6.9e-134	96.90	uncharacterized protein LOC111429720 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LU66	1.0e-81	62.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423280 PE=4 SV=1	[more]

BLAST of CmaCh10G003880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988303.1	3.0e-139	100.00	uncharacterized protein LOC111485591 isoform X1 [Cucurbita maxima]	[more]
XP_022988304.1	1.1e-136	99.22	uncharacterized protein LOC111485591 isoform X2 [Cucurbita maxima]	[more]
KAG6589699.1	1.4e-136	98.06	hypothetical protein SDJN03_15122, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022921442.1	4.0e-136	97.67	uncharacterized protein LOC111429720 isoform X1 [Cucurbita moschata]	[more]
XP_023515485.1	1.5e-135	97.67	uncharacterized protein LOC111779630 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh10G003880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57340.2	3.4e-16	33.17	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT5G57340.1	3.4e-16	33.17	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G26620.1	1.7e-07	35.59	Plant protein of unknown function (DUF863)	[more]
AT5G67390.1	1.4e-06	35.79	unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of un...	[more]
AT5G67390.2	1.4e-06	35.79	unknown protein; BEST Arabidopsis thaliana protein match is: Plant protein of un...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..258
None	No IPR available	PANTHER	PTHR33167:SF33	RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR Q-LIKE PROTEIN	coord: 61..257
None	No IPR available	PANTHER	PTHR33167	FAMILY NOT NAMED	coord: 61..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G003880.1	CmaCh10G003880.1	mRNA